ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal17p20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550189.1| Oryza sativa (japonica cultivar-group), mRNA 280 3e-72
2dbj|AK063770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 133 4e-28
4dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic D... 133 4e-28
5ref|XM_475639.1| Oryza sativa (japonica cultivar-group), predic... 101 1e-18
6dbj|AK099832.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
7dbj|AK072427.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 1e-18
8gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome... 86 8e-14
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 86 8e-14
10ref|NM_121359.3| Arabidopsis thaliana unknown protein AT5G13560 ... 48 0.017
11emb|AL391710.1|ATT6I14 Arabidopsis thaliana DNA chromosome 5, BA... 48 0.017
12gb|BT005947.1| Arabidopsis thaliana At5g13560 gene, complete cds 48 0.017
13dbj|AK117870.1| Arabidopsis thaliana At5g13560 mRNA for unknown ... 48 0.017
14dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 48 0.017
15gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
16gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's ... 42 1.1
17emb|AL137219.11| Human DNA sequence from clone RP11-219B15 on ch... 42 1.1
18emb|CR378671.1| Photobacterium profundum SS9; segment 9/12 42 1.1
19dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
20gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
21ref|XM_365643.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 4.2
22ref|NM_001032474.1| Ciona intestinalis axonemal p66.0 (CiAxp66.0... 40 4.2
23gb|AC125044.3| Mus musculus BAC clone RP23-348B10 from chromosom... 40 4.2
24gb|AC149474.15| Medicago truncatula clone mth2-122l24, complete ... 40 4.2
25gb|AC149080.14| Medicago truncatula clone mth2-75j5, complete se... 40 4.2
26gb|U41994.2| Caenorhabditis elegans cosmid F59A6, complete sequence 40 4.2
27emb|AL691514.5| Human DNA sequence from clone RP11-105M16 on chr... 40 4.2
28gb|AC161377.6| Mus musculus BAC clone RP23-224D3 from chromosome... 40 4.2
29gb|AC114401.2| Homo sapiens chromosome 3 clone RP11-85I21, compl... 40 4.2
30gb|AC153725.3| Medicago truncatula clone mth2-78c5, complete seq... 40 4.2
31gb|AF397179.1| Rattus norvegicus beta-catenin (Ctnnb1) gene, com... 40 4.2
32gb|AC138029.2| Homo sapiens chromosome 5 clone CTD-2636I19, comp... 40 4.2
33dbj|AB083180.1| Ciona intestinalis CiAxp66.0 mRNA for axonemal p... 40 4.2
34dbj|AK117064.1| Ciona intestinalis cDNA, clone:cits024a15, full ... 40 4.2
35emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chr... 40 4.2 
>ref|XM_550189.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1578

 Score =  280 bits (141), Expect = 3e-72
 Identities = 276/320 (86%), Gaps = 1/320 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaactttnaaaa-ctattgcctcatgtaatgtggaggctggtgtagtcaagacttggatc 60
           ||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 557 gaactttcaaaatctattacctcatgtaatgtggaggctggcgtagtcaagacttggatc 616

                                                                       
Query: 61  aatttccttgaggatacatggcagctccagtcgtcatacgacgaacagattgaacagaaa 120
           ||||||||||||||||| |||||||| ||||| |||||  | |||||||  ||| ||| |
Sbjct: 617 aatttccttgaggatacgtggcagcttcagtcatcatataatgaacagaaggaaaagaga 676

                                                                       
Query: 121 accaatgatgagctagagagatgcacaagcaattttatgaagttgacgaaatatcacctt 180
           |||||||||||||| |||||||| |||  ||||||  |||| ||||| ||||||||||||
Sbjct: 677 accaatgatgagcttgagagatgtacagacaatttcctgaaattgactaaatatcacctt 736

                                                                       
Query: 181 tctacattcaaggaagttctaagcccatcgattgagcggatccacacatacgtggataat 240
           ||||||||||||||| |||| |||||||| |||||||| |||  ||||||||||||||||
Sbjct: 737 tctacattcaaggaaattctgagcccatcaattgagcgaatctgcacatacgtggataat 796

                                                                       
Query: 241 ttggcattcttaaattcaagggatgagtcaacggaacttgaagacgaggagatatcagaa 300
           |||||| |  |  | |||||||| | |||||| |||| |||  | |||||  ||||||||
Sbjct: 797 ttggcagttctgcagtcaagggacgtgtcaacagaacatgacaatgaggaactatcagaa 856

                               
Query: 301 aagacaagcccacagaaatc 320
           |||||||| |||||||||||
Sbjct: 857 aagacaagtccacagaaatc 876
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>dbj|AK063770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B11, full
           insert sequence
          Length = 1577

 Score =  264 bits (133), Expect = 2e-67
 Identities = 275/320 (85%), Gaps = 2/320 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaactttnaaaa-ctattgcctcatgtaatgtggaggctggtgtagtcaagacttggatc 60
           ||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 557 gaactttcaaaatctattacctcatgtaatgtggaggctggcgtagtcaagacttggatc 616

                                                                       
Query: 61  aatttccttgaggatacatggcagctccagtcgtcatacgacgaacagattgaacagaaa 120
           ||||||||||||||||| |||||||| ||||| |||||  | |||||||  ||| ||| |
Sbjct: 617 aatttccttgaggatacgtggcagcttcagtcatcatataatgaacagaaggaaaagaga 676

                                                                       
Query: 121 accaatgatgagctagagagatgcacaagcaattttatgaagttgacgaaatatcacctt 180
           |||||||||||||| |||||||| |||  ||||||  |||| ||||| ||||||||||||
Sbjct: 677 accaatgatgagcttgagagatgtacagacaatttcctgaaattgactaaatatcacctt 736

                                                                       
Query: 181 tctacattcaaggaagttctaagcccatcgattgagcggatccacacatacgtggataat 240
           ||||||||||||||| |||| |||||| | |||||||| |||  ||||||||||||||||
Sbjct: 737 tctacattcaaggaaattctgagccca-caattgagcgaatctgcacatacgtggataat 795

                                                                       
Query: 241 ttggcattcttaaattcaagggatgagtcaacggaacttgaagacgaggagatatcagaa 300
           |||||| |  |  | |||||||| | |||||| |||| |||  | |||||  ||||||||
Sbjct: 796 ttggcagttctgcagtcaagggacgtgtcaacagaacatgacaatgaggaactatcagaa 855

                               
Query: 301 aagacaagcccacagaaatc 320
           |||||||| |||||||||||
Sbjct: 856 aagacaagtccacagaaatc 875
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  133 bits (67), Expect = 4e-28
 Identities = 91/98 (92%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                           
Query: 2       gaactttnaaaa-ctattgcctcatgtaatgtggaggctggtgtagtcaagacttggatc 60
               ||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2972954 gaactttcaaaatctattacctcatgtaatgtggaggctggcgtagtcaagacttggatc 2972895

                                                     
Query: 61      aatttccttgaggatacatggcagctccagtcgtcata 98
               ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 2972894 aatttccttgaggatacgtggcagcttcagtcatcata 2972857



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                           
Query: 126     tgatgagctagagagatgcacaagcaattttatgaagttgacgaaatatcacctttctac 185
               ||||||||| |||||||| |||  ||||||  |||| ||||| |||||||||||||||||
Sbjct: 2972747 tgatgagcttgagagatgtacagacaatttcctgaaattgactaaatatcacctttctac 2972688

                       
Query: 186     attcaagg 193
               ||||||||
Sbjct: 2972687 attcaagg 2972680



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                       
Query: 191     aggaagttctaagcccatcgattgagcggatccacacatacgtggataatttggca 246
               ||||| |||| |||||||| |||||||| |||  ||||||||||||||||||||||
Sbjct: 2972571 aggaaattctgagcccatcaattgagcgaatctgcacatacgtggataatttggca 2972516



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 293     tatcagaaaagacaagcccacagaaatc 320
               |||||||||||||||| |||||||||||
Sbjct: 2972369 tatcagaaaagacaagtccacagaaatc 2972342
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>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0011G08
          Length = 139490

 Score =  133 bits (67), Expect = 4e-28
 Identities = 91/98 (92%), Gaps = 1/98 (1%)
 Strand = Plus / Minus

                                                                         
Query: 2     gaactttnaaaa-ctattgcctcatgtaatgtggaggctggtgtagtcaagacttggatc 60
             ||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 54471 gaactttcaaaatctattacctcatgtaatgtggaggctggcgtagtcaagacttggatc 54412

                                                   
Query: 61    aatttccttgaggatacatggcagctccagtcgtcata 98
             ||||||||||||||||| |||||||| ||||| |||||
Sbjct: 54411 aatttccttgaggatacgtggcagcttcagtcatcata 54374



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 126   tgatgagctagagagatgcacaagcaattttatgaagttgacgaaatatcacctttctac 185
             ||||||||| |||||||| |||  ||||||  |||| ||||| |||||||||||||||||
Sbjct: 54264 tgatgagcttgagagatgtacagacaatttcctgaaattgactaaatatcacctttctac 54205

                     
Query: 186   attcaagg 193
             ||||||||
Sbjct: 54204 attcaagg 54197



 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 191   aggaagttctaagcccatcgattgagcggatccacacatacgtggataatttggca 246
             ||||| |||| |||||||| |||||||| |||  ||||||||||||||||||||||
Sbjct: 54088 aggaaattctgagcccatcaattgagcgaatctgcacatacgtggataatttggca 54033



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 293   tatcagaaaagacaagcccacagaaatc 320
             |||||||||||||||| |||||||||||
Sbjct: 53886 tatcagaaaagacaagtccacagaaatc 53859
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>ref|XM_475639.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2397

 Score =  101 bits (51), Expect = 1e-18
 Identities = 180/223 (80%)
 Strand = Plus / Plus

                                                                        
Query: 22   tcatgtaatgtggaggctggtgtagtcaagacttggatcaatttccttgaggatacatgg 81
            |||||||||||||| ||   |||||||||||| |||||||||||||| |||||||| |||
Sbjct: 1651 tcatgtaatgtggaagccaatgtagtcaagacctggatcaatttcctcgaggatacctgg 1710

                                                                        
Query: 82   cagctccagtcgtcatacgacgaacagattgaacagaaaaccaatgatgagctagagaga 141
            |||||||||||  ||||  | |||||||  ||| |||||||   ||||||| | ||||||
Sbjct: 1711 cagctccagtcaacatataatgaacagaaggaaaagaaaacatgtgatgagttggagaga 1770

                                                                        
Query: 142  tgcacaagcaattttatgaagttgacgaaatatcacctttctacattcaaggaagttcta 201
            ||    || | |||| |||||||||| ||| ||||||||||    |||||||| || |||
Sbjct: 1771 tgtgtgagtagttttctgaagttgaccaaacatcacctttcagtcttcaaggaggtccta 1830

                                                       
Query: 202  agcccatcgattgagcggatccacacatacgtggataatttgg 244
            ||||| || |||||| | ||||  ||||| |||||||| ||||
Sbjct: 1831 agcccgtcaattgagagtatccgaacatatgtggataacttgg 1873
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>dbj|AK099832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106A22, full
            insert sequence
          Length = 2422

 Score =  101 bits (51), Expect = 1e-18
 Identities = 180/223 (80%)
 Strand = Plus / Plus

                                                                        
Query: 22   tcatgtaatgtggaggctggtgtagtcaagacttggatcaatttccttgaggatacatgg 81
            |||||||||||||| ||   |||||||||||| |||||||||||||| |||||||| |||
Sbjct: 1390 tcatgtaatgtggaagccaatgtagtcaagacctggatcaatttcctcgaggatacctgg 1449

                                                                        
Query: 82   cagctccagtcgtcatacgacgaacagattgaacagaaaaccaatgatgagctagagaga 141
            |||||||||||  ||||  | |||||||  ||| |||||||   ||||||| | ||||||
Sbjct: 1450 cagctccagtcaacatataatgaacagaaggaaaagaaaacatgtgatgagttggagaga 1509

                                                                        
Query: 142  tgcacaagcaattttatgaagttgacgaaatatcacctttctacattcaaggaagttcta 201
            ||    || | |||| |||||||||| ||| ||||||||||    |||||||| || |||
Sbjct: 1510 tgtgtgagtagttttctgaagttgaccaaacatcacctttcagtcttcaaggaggtccta 1569

                                                       
Query: 202  agcccatcgattgagcggatccacacatacgtggataatttgg 244
            ||||| || |||||| | ||||  ||||| |||||||| ||||
Sbjct: 1570 agcccgtcaattgagagtatccgaacatatgtggataacttgg 1612
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>dbj|AK072427.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089J15, full
            insert sequence
          Length = 2428

 Score =  101 bits (51), Expect = 1e-18
 Identities = 180/223 (80%)
 Strand = Plus / Plus

                                                                        
Query: 22   tcatgtaatgtggaggctggtgtagtcaagacttggatcaatttccttgaggatacatgg 81
            |||||||||||||| ||   |||||||||||| |||||||||||||| |||||||| |||
Sbjct: 1395 tcatgtaatgtggaagccaatgtagtcaagacctggatcaatttcctcgaggatacctgg 1454

                                                                        
Query: 82   cagctccagtcgtcatacgacgaacagattgaacagaaaaccaatgatgagctagagaga 141
            |||||||||||  ||||  | |||||||  ||| |||||||   ||||||| | ||||||
Sbjct: 1455 cagctccagtcaacatataatgaacagaaggaaaagaaaacatgtgatgagttggagaga 1514

                                                                        
Query: 142  tgcacaagcaattttatgaagttgacgaaatatcacctttctacattcaaggaagttcta 201
            ||    || | |||| |||||||||| ||| ||||||||||    |||||||| || |||
Sbjct: 1515 tgtgtgagtagttttctgaagttgaccaaacatcacctttcagtcttcaaggaggtccta 1574

                                                       
Query: 202  agcccatcgattgagcggatccacacatacgtggataatttgg 244
            ||||| || |||||| | ||||  ||||| |||||||| ||||
Sbjct: 1575 agcccgtcaattgagagtatccgaacatatgtggataacttgg 1617
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>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0099P06, complete sequence
          Length = 135117

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                         
Query: 22    tcatgtaatgtggaggctggtgtagtcaagacttggatcaatttccttgaggatacatgg 81
             |||||||||||||| ||   |||||||||||| |||||||||||||| |||||||| |||
Sbjct: 16374 tcatgtaatgtggaagccaatgtagtcaagacctggatcaatttcctcgaggatacctgg 16315

                        
Query: 82    cagctccagtc 92
             |||||||||||
Sbjct: 16314 cagctccagtc 16304
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                           
Query: 22      tcatgtaatgtggaggctggtgtagtcaagacttggatcaatttccttgaggatacatgg 81
               |||||||||||||| ||   |||||||||||| |||||||||||||| |||||||| |||
Sbjct: 3594027 tcatgtaatgtggaagccaatgtagtcaagacctggatcaatttcctcgaggatacctgg 3593968

                          
Query: 82      cagctccagtc 92
               |||||||||||
Sbjct: 3593967 cagctccagtc 3593957
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>ref|NM_121359.3| Arabidopsis thaliana unknown protein AT5G13560 mRNA, complete cds
          Length = 3080

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 47   tcaagacttggatcaatttccttgaggatacatggc 82
            ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 1366 tcaagacgtggattaattttcttgaggatacatggc 1401
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>emb|AL391710.1|ATT6I14 Arabidopsis thaliana DNA chromosome 5, BAC clone T6I14 (ESSA project)
          Length = 90472

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                 
Query: 47    tcaagacttggatcaatttccttgaggatacatggc 82
             ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 45330 tcaagacgtggattaattttcttgaggatacatggc 45295
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>gb|BT005947.1| Arabidopsis thaliana At5g13560 gene, complete cds
          Length = 2040

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 47   tcaagacttggatcaatttccttgaggatacatggc 82
            ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 1274 tcaagacgtggattaattttcttgaggatacatggc 1309
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>dbj|AK117870.1| Arabidopsis thaliana At5g13560 mRNA for unknown protein, complete
            cds, clone: RAFL19-04-J19
          Length = 2366

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                
Query: 47   tcaagacttggatcaatttccttgaggatacatggc 82
            ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 1366 tcaagacgtggattaattttcttgaggatacatggc 1401
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>dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSH12
          Length = 79259

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 47   tcaagacttggatcaatttccttgaggatacatggc 82
            ||||||| ||||| ||||| ||||||||||||||||
Sbjct: 6072 tcaagacgtggattaattttcttgaggatacatggc 6037
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>gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0066C04, complete sequence
          Length = 133944

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 280   gaagacgaggagatatcagaaaaga 304
             |||||||||||||||| ||||||||
Sbjct: 79335 gaagacgaggagatataagaaaaga 79359
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>gb|AC114699.5| Rattus norvegicus 19 BAC CH230-235A3 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 224930

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 174    tcacctttctacattcaaggaagtt 198
              |||||||||||||||| ||||||||
Sbjct: 171376 tcacctttctacattccaggaagtt 171352
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>emb|AL137219.11| Human DNA sequence from clone RP11-219B15 on chromosome 13, complete
             sequence
          Length = 31762

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 246   attcttaaattcaagggatga 266
             |||||||||||||||||||||
Sbjct: 11761 attcttaaattcaagggatga 11741
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>emb|CR378671.1| Photobacterium profundum SS9; segment 9/12
          Length = 349688

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 39     tggtgtagtcaagacttggat 59
              |||||||||||||||||||||
Sbjct: 141968 tggtgtagtcaagacttggat 141988
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 280      gaagacgaggagatatcagaaaaga 304
                |||||||||||||||| ||||||||
Sbjct: 11668391 gaagacgaggagatataagaaaaga 11668367
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 280      gaagacgaggagatatcagaaaaga 304
                |||||||||||||||| ||||||||
Sbjct: 11747580 gaagacgaggagatataagaaaaga 11747556
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>ref|XM_365643.1| Magnaporthe grisea 70-15 predicted protein (MG02345.4) partial mRNA
          Length = 534

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 235 gataatttggcattcttaaa 254
           ||||||||||||||||||||
Sbjct: 142 gataatttggcattcttaaa 123
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>ref|NM_001032474.1| Ciona intestinalis axonemal p66.0 (CiAxp66.0), mRNA
          Length = 2037

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  attgaacagaaaaccaatga 128
            ||||||||||||||||||||
Sbjct: 1405 attgaacagaaaaccaatga 1424
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>gb|AC125044.3| Mus musculus BAC clone RP23-348B10 from chromosome 17, complete sequence
          Length = 222615

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     atttccttgaggatacatgg 81
              ||||||||||||||||||||
Sbjct: 130215 atttccttgaggatacatgg 130196
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>gb|AC149474.15| Medicago truncatula clone mth2-122l24, complete sequence
          Length = 129008

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   cagattgaacagaaaaccaa 125
             ||||||||||||||||||||
Sbjct: 24401 cagattgaacagaaaaccaa 24420
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>gb|AC149080.14| Medicago truncatula clone mth2-75j5, complete sequence
          Length = 96907

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   cagattgaacagaaaaccaa 125
             ||||||||||||||||||||
Sbjct: 46640 cagattgaacagaaaaccaa 46621
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>gb|U41994.2| Caenorhabditis elegans cosmid F59A6, complete sequence
          Length = 34828

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   acgaacagattgaacagaaa 120
             ||||||||||||||||||||
Sbjct: 17147 acgaacagattgaacagaaa 17166
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>emb|AL691514.5| Human DNA sequence from clone RP11-105M16 on chromosome 10, complete
             sequence
          Length = 154348

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   aacagattgaacagaaaacc 123
             ||||||||||||||||||||
Sbjct: 88896 aacagattgaacagaaaacc 88877
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>gb|AC161377.6| Mus musculus BAC clone RP23-224D3 from chromosome 16, complete sequence
          Length = 201384

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    tatcacctttctacattcaa 191
              ||||||||||||||||||||
Sbjct: 166655 tatcacctttctacattcaa 166636
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>gb|AC114401.2| Homo sapiens chromosome 3 clone RP11-85I21, complete sequence
          Length = 172671

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   agaaaagacaagcccacaga 316
             ||||||||||||||||||||
Sbjct: 28712 agaaaagacaagcccacaga 28731
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>gb|AC153725.3| Medicago truncatula clone mth2-78c5, complete sequence
          Length = 137377

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   aagcaattttatgaagttga 166
             ||||||||||||||||||||
Sbjct: 57847 aagcaattttatgaagttga 57866
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>gb|AF397179.1| Rattus norvegicus beta-catenin (Ctnnb1) gene, complete cds
          Length = 9802

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  aatgatgagctagagagatg 143
            ||||||||||||||||||||
Sbjct: 2744 aatgatgagctagagagatg 2725
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>gb|AC138029.2| Homo sapiens chromosome 5 clone CTD-2636I19, complete sequence
          Length = 82196

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   gaacagattgaacagaaaac 122
             ||||||||||||||||||||
Sbjct: 71136 gaacagattgaacagaaaac 71117
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>dbj|AB083180.1| Ciona intestinalis CiAxp66.0 mRNA for axonemal p66.0, complete cds
          Length = 2037

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  attgaacagaaaaccaatga 128
            ||||||||||||||||||||
Sbjct: 1405 attgaacagaaaaccaatga 1424
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>dbj|AK117064.1| Ciona intestinalis cDNA, clone:cits024a15, full insert sequence
          Length = 1415

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 109 attgaacagaaaaccaatga 128
           ||||||||||||||||||||
Sbjct: 799 attgaacagaaaaccaatga 818
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>emb|AL450399.16| Mouse DNA sequence from clone RP23-286I5 on chromosome X, complete
             sequence
          Length = 207922

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 299   aaaagacaagcccacagaaa 318
             ||||||||||||||||||||
Sbjct: 80242 aaaagacaagcccacagaaa 80261


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,760,965
Number of Sequences: 3902068
Number of extensions: 2760965
Number of successful extensions: 75472
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75348
Number of HSP's gapped (non-prelim): 121
length of query: 320
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 298
effective length of database: 17,147,199,772
effective search space: 5109865532056
effective search space used: 5109865532056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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