ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal17p18 |
|---|---|
| Clone Library Name | barley_pub |
>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5| Length = 355 Score = 44.7 bits (104), Expect = 2e-04 Identities = 20/22 (90%), Positives = 21/22 (95%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 KTIRYASRKAYAESRP +KGRF Sbjct: 303 KTIRYASRKAYAESRPRIKGRF 324
>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1| Length = 355 Score = 43.1 bits (100), Expect = 5e-04 Identities = 19/22 (86%), Positives = 20/22 (90%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 KTIRYASRKAYAE RP +KGRF Sbjct: 304 KTIRYASRKAYAEKRPRIKGRF 325
>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3| Length = 294 Score = 42.7 bits (99), Expect = 6e-04 Identities = 19/22 (86%), Positives = 20/22 (90%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 KTIRYASRKAYAE RP +KGRF Sbjct: 247 KTIRYASRKAYAEMRPRIKGRF 268
>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4| Length = 362 Score = 42.7 bits (99), Expect = 6e-04 Identities = 19/22 (86%), Positives = 20/22 (90%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 KTIRYASRKAYAE RP +KGRF Sbjct: 313 KTIRYASRKAYAEMRPRIKGRF 334
>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2| Length = 347 Score = 42.4 bits (98), Expect = 8e-04 Identities = 19/22 (86%), Positives = 20/22 (90%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 KTIRYASRKAYAE RP +KGRF Sbjct: 296 KTIRYASRKAYAEIRPRIKGRF 317
>CONS_ARATH (Q39057) Zinc finger protein CONSTANS| Length = 373 Score = 40.8 bits (94), Expect = 0.002 Identities = 19/22 (86%), Positives = 19/22 (86%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 KTIRYASRKAYAE RP V GRF Sbjct: 324 KTIRYASRKAYAEIRPRVNGRF 345
>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11| Length = 330 Score = 33.9 bits (76), Expect = 0.28 Identities = 16/22 (72%), Positives = 18/22 (81%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K IRYASRKA A++R VKGRF Sbjct: 294 KQIRYASRKARADTRKRVKGRF 315
>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12| Length = 337 Score = 33.9 bits (76), Expect = 0.28 Identities = 16/22 (72%), Positives = 18/22 (81%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K IRYASRKA A++R VKGRF Sbjct: 298 KQIRYASRKARADTRKRVKGRF 319
>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14| Length = 402 Score = 33.5 bits (75), Expect = 0.37 Identities = 16/22 (72%), Positives = 18/22 (81%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 KTIRY +RKA AE+R VKGRF Sbjct: 375 KTIRYETRKARAETRLRVKGRF 396
>APRR9_ARATH (Q8L500) Two-component response regulator-like APRR9| (Pseudo-response regulator 9) Length = 468 Score = 32.3 bits (72), Expect = 0.82 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K +RY SRK AE RP VKG+F Sbjct: 435 KKVRYQSRKKLAEQRPRVKGQF 456
>PRR95_ORYSA (Q689G6) Two-component response regulator-like PRR95| (Pseudo-response regulator 95) (OsPRR95) Length = 623 Score = 32.3 bits (72), Expect = 0.82 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K +RY SRK AE RP VKG+F Sbjct: 592 KKVRYQSRKLLAEQRPRVKGQF 613
>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15| Length = 433 Score = 32.3 bits (72), Expect = 0.82 Identities = 15/22 (68%), Positives = 18/22 (81%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 KTIRY SRKA A++R V+GRF Sbjct: 403 KTIRYESRKARADTRLRVRGRF 424
>APRR5_ARATH (Q6LA42) Two-component response regulator-like APRR5| (Pseudo-response regulator 5) Length = 558 Score = 32.0 bits (71), Expect = 1.1 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K +RY SRK AE RP +KG+F Sbjct: 527 KKVRYESRKKLAEQRPRIKGQF 548
>APRR3_ARATH (Q9LVG4) Two-component response regulator-like APRR3| (Pseudo-response regulator 3) Length = 495 Score = 32.0 bits (71), Expect = 1.1 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K +RY SRK AE RP VKG+F Sbjct: 460 KKVRYHSRKKLAEQRPHVKGQF 481
>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9| Length = 372 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K +RYASRKA A+ R VKGRF Sbjct: 333 KRVRYASRKARADVRRRVKGRF 354
>APRR1_ARATH (Q9LKL2) Two-component response regulator-like APRR1| (Pseudo-response regulator 1) (Timing of CAB expression 1) (ABI3-interacting protein 1) Length = 618 Score = 31.6 bits (70), Expect = 1.4 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K IRY +RK AE RP VKG+F Sbjct: 551 KKIRYVNRKRLAERRPRVKGQF 572
>PRR37_ORYSA (Q689G8) Two-component response regulator-like PRR37| (Pseudo-response regulator 37) (OsPRR37) Length = 742 Score = 31.2 bits (69), Expect = 1.8 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K +RY SRK AE RP V+G+F Sbjct: 700 KKVRYQSRKRLAEQRPRVRGQF 721
>APRR7_ARATH (Q93WK5) Two-component response regulator-like APRR7| (Pseudo-response regulator 7) Length = 727 Score = 31.2 bits (69), Expect = 1.8 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K +RY SRK AE RP V+G+F Sbjct: 687 KKVRYQSRKKLAEQRPRVRGQF 708
>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7| Length = 392 Score = 31.2 bits (69), Expect = 1.8 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K IRY RK AE RP +KGRF Sbjct: 363 KKIRYEVRKLNAEQRPRIKGRF 384
>PRR73_ORYSA (Q689G4) Two-component response regulator-like PRR73| (Pseudo-response regulator 73) (OsPRR73) Length = 767 Score = 30.8 bits (68), Expect = 2.4 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K +RY SRK AE RP ++G+F Sbjct: 730 KKVRYQSRKRLAEQRPRIRGQF 751
>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13| Length = 332 Score = 30.8 bits (68), Expect = 2.4 Identities = 14/22 (63%), Positives = 16/22 (72%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K IRY SRK AESR ++GRF Sbjct: 305 KHIRYESRKVRAESRTRIRGRF 326
>PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1| (Pseudo-response regulator 1) (OsPRR1) Length = 518 Score = 30.8 bits (68), Expect = 2.4 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K +RY +RK AE+RP V+G+F Sbjct: 461 KKVRYVNRKKLAETRPRVRGQF 482
>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6| Length = 406 Score = 30.4 bits (67), Expect = 3.1 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K IRY RK AE RP +KGRF Sbjct: 375 KKIRYEVRKLNAEKRPRMKGRF 396
>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16| Length = 417 Score = 30.4 bits (67), Expect = 3.1 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K IRY RK AE RP +KGRF Sbjct: 379 KKIRYEVRKLNAEKRPRMKGRF 400
>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8| Length = 313 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = +2 Query: 2 KTIRYASRKAYAESRPXVKGRF 67 K IRY RK A+ RP +KGRF Sbjct: 283 KKIRYEVRKVNADKRPRMKGRF 304
>DPO3A_PSEFL (Q9XDH6) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1173 Score = 29.3 bits (64), Expect = 7.0 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = -2 Query: 250 YMHQWYKYKAAGPCCAPTYGSEGRHDAVTEVEQVGCG 140 Y H Y+Y+ P APTYG + V ++ QV G Sbjct: 665 YPHPDYQYEGLQPVLAPTYGIILYQEQVMQIAQVMAG 701 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,467,453 Number of Sequences: 219361 Number of extensions: 750604 Number of successful extensions: 1550 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1531 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1550 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
