| Clone Name | baal18e24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.018 Identities = 47/55 (85%) Strand = Plus / Plus Query: 46 tcattgagagttcacaagggcaaaatgtgtacccagctgatcaacaaatgctcat 100 ||||||||||| | || ||||| ||||||||||| || ||||| || |||||||| Sbjct: 8732139 tcattgagagtactcaggggcagaatgtgtacccggcggatcagcagatgctcat 8732193
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 46.1 bits (23), Expect = 0.018 Identities = 47/55 (85%) Strand = Plus / Plus Query: 46 tcattgagagttcacaagggcaaaatgtgtacccagctgatcaacaaatgctcat 100 ||||||||||| | || ||||| ||||||||||| || ||||| || |||||||| Sbjct: 2460 tcattgagagtactcaggggcagaatgtgtacccggcggatcagcagatgctcat 2514
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 46.1 bits (23), Expect = 0.018 Identities = 47/55 (85%) Strand = Plus / Plus Query: 46 tcattgagagttcacaagggcaaaatgtgtacccagctgatcaacaaatgctcat 100 ||||||||||| | || ||||| ||||||||||| || ||||| || |||||||| Sbjct: 147121 tcattgagagtactcaggggcagaatgtgtacccggcggatcagcagatgctcat 147175
>dbj|AK073271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029B07, full insert sequence Length = 1629 Score = 46.1 bits (23), Expect = 0.018 Identities = 47/55 (85%) Strand = Plus / Plus Query: 46 tcattgagagttcacaagggcaaaatgtgtacccagctgatcaacaaatgctcat 100 ||||||||||| | || ||||| ||||||||||| || ||||| || |||||||| Sbjct: 235 tcattgagagtactcaggggcagaatgtgtacccggcggatcagcagatgctcat 289
>dbj|AK061556.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C08, full insert sequence Length = 1567 Score = 46.1 bits (23), Expect = 0.018 Identities = 47/55 (85%) Strand = Plus / Plus Query: 46 tcattgagagttcacaagggcaaaatgtgtacccagctgatcaacaaatgctcat 100 ||||||||||| | || ||||| ||||||||||| || ||||| || |||||||| Sbjct: 200 tcattgagagtactcaggggcagaatgtgtacccggcggatcagcagatgctcat 254
>ref|XM_743216.1| Aspergillus fumigatus Af293 flavin-containing monooxygenase (Afu5g00310) partial mRNA Length = 1908 Score = 42.1 bits (21), Expect = 0.29 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 cgccgacaaggtttctgatgt 37 ||||||||||||||||||||| Sbjct: 1719 cgccgacaaggtttctgatgt 1739
>gb|AC127565.5| Mus musculus BAC clone RP24-292K9 from chromosome 7, complete sequence Length = 188650 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 35 tgtaaagaagctcattgag 53 ||||||||||||||||||| Sbjct: 24456 tgtaaagaagctcattgag 24474
>gb|AC164398.8| Mus musculus chromosome 7, clone RP23-307M24, complete sequence Length = 196756 Score = 38.2 bits (19), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 59 acaagggcaaaatgtgtacccag 81 ||||||| ||||||||||||||| Sbjct: 85691 acaaggggaaaatgtgtacccag 85713
>gb|AY496910.1| Glycine max cytosolic malate dehydrogenase mRNA, complete cds Length = 1312 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 aggtttctgatgtaaagaa 43 ||||||||||||||||||| Sbjct: 576 aggtttctgatgtaaagaa 594
>ref|XM_720185.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04902) partial mRNA Length = 1509 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tgatgtaaagaagctcatt 50 ||||||||||||||||||| Sbjct: 18 tgatgtaaagaagctcatt 36
>gb|AC140952.1| Pan troglodytes BAC clone RP43-22I12 from 7, complete sequence Length = 170350 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 gtttctgatgtaaagaagc 45 ||||||||||||||||||| Sbjct: 145469 gtttctgatgtaaagaagc 145487
>emb|BX927347.12| Zebrafish DNA sequence from clone CH211-110D14 in linkage group 21, complete sequence Length = 75388 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 gttcacaagggcaaaatgt 73 ||||||||||||||||||| Sbjct: 72213 gttcacaagggcaaaatgt 72195
>emb|AL391815.6| Human DNA sequence from clone RP11-223L24 on chromosome 6, complete sequence Length = 61274 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 ccagctgatcaacaaatgc 96 ||||||||||||||||||| Sbjct: 20928 ccagctgatcaacaaatgc 20910
>emb|BX296567.23| Zebrafish DNA sequence from clone DKEY-261P22 in linkage group 15, complete sequence Length = 224041 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 gttcacaagggcaaaatgt 73 ||||||||||||||||||| Sbjct: 194515 gttcacaagggcaaaatgt 194497
>gb|AC090675.10| Homo sapiens 12 BAC RP11-681A17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174044 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 ttcacaagggcaaaatgtg 74 ||||||||||||||||||| Sbjct: 123737 ttcacaagggcaaaatgtg 123755
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 aaggtttctgatgtaaaga 42 ||||||||||||||||||| Sbjct: 18424563 aaggtttctgatgtaaaga 18424545
>gb|AC107739.9| Mus musculus chromosome 7, clone RP23-345M1, complete sequence Length = 205227 Score = 38.2 bits (19), Expect = 4.5 Identities = 22/23 (95%) Strand = Plus / Plus Query: 59 acaagggcaaaatgtgtacccag 81 ||||||| ||||||||||||||| Sbjct: 195250 acaaggggaaaatgtgtacccag 195272
>gb|AC151799.2| Pan troglodytes BAC clone RP43-44D10 from chromosome 7, complete sequence Length = 183888 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 gtttctgatgtaaagaagc 45 ||||||||||||||||||| Sbjct: 99663 gtttctgatgtaaagaagc 99645
>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_B11 Length = 102824 Score = 38.2 bits (19), Expect = 4.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 aaggtttctgatgtaaaga 42 ||||||||||||||||||| Sbjct: 16411 aaggtttctgatgtaaaga 16393 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 848,620 Number of Sequences: 3902068 Number of extensions: 848620 Number of successful extensions: 51666 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 51612 Number of HSP's gapped (non-prelim): 54 length of query: 101 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 80 effective length of database: 17,151,101,840 effective search space: 1372088147200 effective search space used: 1372088147200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)