>PAO_MAIZE (O64411) Polyamine oxidase precursor (EC 1.5.3.11)|
          Length = 500

 Score =  167 bits (423), Expect = 6e-42
 Identities = 77/107 (71%), Positives = 90/107 (84%)
 Frame = +1

Query: 40  YDEEFVQKRMDRADEVEELGGKFAAKLDPSGRDDISILAMQRLFNHQPNGPTTPVDMALD 219
           YDE++VQKR++ AD VEE+G K +A L  SGRDD+SILAMQRL  HQPNGP TPVDM +D
Sbjct: 132 YDEDYVQKRIELADSVEEMGEKLSATLHASGRDDMSILAMQRLNEHQPNGPATPVDMVVD 191

Query: 220 YYKYDYEFAEPPRVTSLQGTEPTATFADFGDDANFVADQRGFETIIY 360
           YYK+DYEFAEPPRVTSLQ T P ATF+DFGDD  FVADQRG+E ++Y
Sbjct: 192 YYKFDYEFAEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVY 238

>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)|
           (Dynamin-like protein 6)
          Length = 914

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 25/77 (32%), Positives = 37/77 (48%)
 Frame = +1

Query: 55  VQKRMDRADEVEELGGKFAAKLDPSGRDDISILAMQRLFNHQPNGPTTPVDMALDYYKYD 234
           VQ+RM+R    EEL G+ + K    G+D    L + R  + QP+GPT    +     K  
Sbjct: 499 VQRRMERQRREEELKGRSSKK----GQDAEQSL-LSRATSPQPDGPTAGGSLKSMKDKPS 553

Query: 235 YEFAEPPRVTSLQGTEP 285
            +  E P V+ L+   P
Sbjct: 554 PQDKETPEVSGLKTAGP 570

>TPS1_ZYGRO (Q96WK6) Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC|
           2.4.1.15) (Trehalose-6-phosphate synthase)
           (UDP-glucose-glucosephosphate glucosyltransferase)
          Length = 485

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +1

Query: 226 KYDYEFAEPPRVTSLQGTEPTATFADFG 309
           KY+Y+F+    VT+LQG + T+TF  +G
Sbjct: 34  KYEYKFSSGGLVTALQGLKKTSTFQWYG 61

>CNTN4_HUMAN (Q8IWV2) Contactin-4 precursor (Brain-derived immunoglobulin|
           superfamily protein 2) (BIG-2)
          Length = 1026

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +1

Query: 88  EELGGKFAAKLDPSGRDDISILAMQRLFNHQPNGPTTPVDMALDYYKYDYEFAEPPRVTS 267
           +E G  + AK++ S   + + +    + NH+  GP TP+ +  D    +Y   EP     
Sbjct: 174 QETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEY---EPKIEVQ 230

Query: 268 LQGTEPTA 291
              T PTA
Sbjct: 231 FPETVPTA 238

>FTSK_MYCTU (O33290) DNA translocase ftsK|
          Length = 831

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -3

Query: 109 RTCRPALPPRRRGPFSSARTPRRRGHRSSXVDVG 8
           R+ R A+P +R  P      P RR HRS  V  G
Sbjct: 25  RSARSAVPRKRSRPVKGVGRPSRRHHRSLLVSTG 58

>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament|
           protein) (Neurofilament medium polypeptide) (NF-M)
          Length = 925

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/36 (38%), Positives = 23/36 (63%)
 Frame = +1

Query: 43  DEEFVQKRMDRADEVEELGGKFAAKLDPSGRDDISI 150
           +EE  Q++    ++VEE+GGK    L  S ++DI+I
Sbjct: 777 EEEKPQEKEKEKEKVEEVGGKEEGGLKESRKEDIAI 812

>CNTN4_MOUSE (Q69Z26) Contactin-4 precursor (Brain-derived immunoglobulin|
           superfamily protein 2) (BIG-2)
          Length = 1026

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = +1

Query: 88  EELGGKFAAKLDPSGRDDISILAMQRLFNHQPNGPTTPV----DMALDYYKYDYEFAEPP 255
           +E G  + AK++ S   + + +    + NH+  GP TP+    D  +  Y+   E   P 
Sbjct: 174 QETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPE 233

Query: 256 RVTSLQGT 279
            V + +GT
Sbjct: 234 TVPAEKGT 241

>CCD19_HUMAN (Q9UL16) Coiled-coil domain-containing protein 19 (Nasopharyngeal|
           epithelium-specific protein 1)
          Length = 386

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -3

Query: 118 TSRRTCRPALPPRRRGPFSSARTPR 44
           TSRR CR  LPP  RG  +S R PR
Sbjct: 347 TSRRKCRTGLPP-LRGAGASKRRPR 370

>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor|
          Length = 1356

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 22/76 (28%), Positives = 31/76 (40%)
 Frame = +1

Query: 94  LGGKFAAKLDPSGRDDISILAMQRLFNHQPNGPTTPVDMALDYYKYDYEFAEPPRVTSLQ 273
           LGG FAA+ D     D     M  + +  PNGP         +  +  E  EP +  S+ 
Sbjct: 66  LGGNFAAQFDGGKGSDPGPGPMGLMGSRGPNGP-PGAPGPQGFTGHAGEPGEPGQTGSIG 124

Query: 274 GTEPTATFADFGDDAN 321
              PT +    G+D N
Sbjct: 125 ARGPTGSAGKPGEDGN 140

>DPOG1_MOUSE (P54099) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial|
            DNA polymerase catalytic subunit) (PolG-alpha)
          Length = 1239

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 59   RREWTAPTRWKSWAASSPRSW 121
            RRE +  +RWK W  ++ R+W
Sbjct: 1008 RREASRKSRWKKWEVAAERAW 1028

>YDE4_SCHPO (Q10438) Hypothetical protein C12B10.04 in chromosome I|
          Length = 403

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +1

Query: 220 YYKYDYEFAEPPRVTSLQGTEPTATFADFGDDANF 324
           Y  Y  E+AEP  +++L+ +    TF +   +ANF
Sbjct: 11  YVNYRDEYAEPKIISALKNSGKELTFTNSAKEANF 45

>IDHP_MOUSE (P54071) Isocitrate dehydrogenase [NADP], mitochondrial precursor|
           (EC 1.1.1.42) (Oxalosuccinate decarboxylase) (IDH)
           (NADP(+)-specific ICDH) (IDP) (ICD-M)
          Length = 523

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +2

Query: 65  EW--TAPTRWKSWAASSPRSWIPAAATTSPSWP 157
           EW  TA       A+ S R+W PAA T  PSWP
Sbjct: 73  EWPATAGCELLCRASGSARTWAPAALTV-PSWP 104

>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)|
           (Dynamin-like protein 3)
          Length = 920

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/48 (37%), Positives = 28/48 (58%)
 Frame = +1

Query: 55  VQKRMDRADEVEELGGKFAAKLDPSGRDDISILAMQRLFNHQPNGPTT 198
           VQ+RM+R    EEL G+ + K    G+D    L + R  + QP+GP++
Sbjct: 499 VQRRMERQRREEELKGRSSKK----GQDAEQSL-LNRATSPQPDGPSS 541

>ATG26_LEPMC (Q8NJS1) Sterol 3-beta-glucosyltransferase (EC 2.4.1.173)|
            (Autophagy-related protein 26) (UDP-glycosyltransferase
            51)
          Length = 1456

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
 Frame = -2

Query: 254  GGSANS*SYL**SSAMSTGVVGPFGWWLKRRC------MAKMEMSSRPLGSNFAANLPP 96
            GG  NS +Y+   +   T + G    W +R         +KM+ S RP   NF+ ++ P
Sbjct: 1105 GGGYNSITYITFDTIFWTAISGQINKWRRRELGLQNTSQSKMQASLRPFLYNFSPHVVP 1163

>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI|
           domain-containing protein 2) (Emu2 protein) (Emilin and
           multimerin domain-containing protein 2)
          Length = 441

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -3

Query: 121 PTSRRTCRPALPPRRRGPFSSARTPRRRGHRSSXVDVG 8
           P  RR   PA PP + GP   A  P  +G R    + G
Sbjct: 192 PRQRRPTGPAGPPGQTGPPGPAGPPGSKGDRGQTGEKG 229

>Y1363_THEAC (Q9HIH6) Putative HTH-type transcriptional regulatory protein|
           Ta1363
          Length = 312

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +1

Query: 67  MDRADEVEELGGKFAAKLDPSGRDDISILAMQRLFNHQPNGPTTPVDMA 213
           +D    V ++ G+F+A  D   R +I    ++ L+N     PTT   +A
Sbjct: 17  LDNGFAVADISGQFSASFDIIARRNIERYVLKVLYNIDTLKPTTAYQLA 65

>KAPC_DICDI (P34099) cAMP-dependent protein kinase catalytic subunit (EC|
           2.7.11.11)
          Length = 648

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +1

Query: 43  DEEFVQKRMDRADEVEELGGKFAAKLDPSGRDDISILAMQRLFNHQPNGPTTP 201
           D + + KR+  AD    LG      LD       S +  +RL+  + NGP  P
Sbjct: 557 DAKDLIKRLLTADRTRRLGALKDGALDVKNHRWFSDINWERLYQRRDNGPFIP 609


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.138    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,451,607
Number of Sequences: 219361
Number of extensions: 534493
Number of successful extensions: 2172
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2172
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)