ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal18e16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 2e-77
2dbj|AK060069.1| Oryza sativa (japonica cultivar-group) cDNA clon... 297 2e-77
3ref|XM_479284.1| Oryza sativa (japonica cultivar-group), mRNA 289 4e-75
4gb|BT017484.1| Zea mays clone EL01N0412C09.c mRNA sequence 281 9e-73
5dbj|AK067207.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 9e-73
6dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 248 1e-62
7dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic D... 248 1e-62
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
9dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 64 4e-07
11gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 geno... 64 4e-07
12gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome... 64 4e-07
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
14dbj|AK099464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
15dbj|AK062116.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
16gb|AC124981.25| Mus musculus chromosome 5, clone RP24-170P20, co... 44 0.36
17gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome ... 44 0.36
18ref|XM_802554.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.4
19dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 42 1.4
20gb|U38308.1|SCU38308 Simian cytomegalovirus major immediate earl... 42 1.4
21gb|U27902.1|SVU27902 Stealth virus 1 clone 3B546 T7 42 1.4
22gb|U26035.1|SVU26035 Stealth virus transactivator IE2 homolog, p... 42 1.4
23gb|AF252827.5| Homo sapiens chromosome 8 clone RP11-166E20 map q... 40 5.7
24emb|CR956650.4| Pig DNA sequence from clone CH242-171I16 on chro... 40 5.7
25gb|AC125543.3| Mus musculus BAC clone RP23-360H5 from chromosome... 40 5.7
26gb|AC165350.3| Mus musculus BAC clone RP23-249A17 from chromosom... 40 5.7
27emb|AL845512.9| Zebrafish DNA sequence from clone CH211-286M4 in... 40 5.7
28emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 5.7
29gb|AC100871.2| Homo sapiens chromosome 8, clone RP11-959I15, com... 40 5.7
30dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.7
31gb|AC020604.9| Homo sapiens BAC clone RP11-536C12 from 2, comple... 40 5.7
32gb|AC092667.3| Homo sapiens BAC clone RP11-549H5 from 2, complet... 40 5.7
33gb|AC104782.5| Homo sapiens BAC clone RP11-30G7 from 2, complete... 40 5.7
34gb|AC134462.5| Mus musculus BAC clone RP23-391L12 from chromosom... 40 5.7
35gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.7
36emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.7
37gb|AC124210.3| Homo sapiens chromosome 8 clone RP11-755E24 map q... 40 5.7
38gb|AC130824.4| Mus musculus BAC clone RP23-349B5 from 12, comple... 40 5.7
39dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 40 5.7 
>dbj|AK105043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A05, full
           insert sequence
          Length = 1012

 Score =  297 bits (150), Expect = 2e-77
 Identities = 291/338 (86%)
 Strand = Plus / Plus

                                                                       
Query: 86  gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 145
           ||||||||| |||||||| |||||| | || ||||| ||||| || ||||||||||||||
Sbjct: 230 gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 289

                                                                       
Query: 146 tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 205
           |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | ||
Sbjct: 290 tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 349

                                                                       
Query: 206 aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 265
           ||||| ||| ||||||||||| ||||| |||||||||||   | |||| ||||| || ||
Sbjct: 350 aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 409

                                                                       
Query: 266 gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 325
           ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || |||||
Sbjct: 410 gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 469

                                                                       
Query: 326 cgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcgcatc 385
            |||||||| |||||||||||| | |||||| |||||||||| ||||| ||||| ||| |
Sbjct: 470 tgggtcatcggctcaggggcaagtaatttggatccactttggagtcaatagtggtgcaac 529

                                                 
Query: 386 acggtttgctcttgagaatcaagctgtgaatgaagcca 423
           | ||||||||||||||||||||||||| ||||||||||
Sbjct: 530 aaggtttgctcttgagaatcaagctgttaatgaagcca 567
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>dbj|AK060069.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H12, full
           insert sequence
          Length = 1012

 Score =  297 bits (150), Expect = 2e-77
 Identities = 291/338 (86%)
 Strand = Plus / Plus

                                                                       
Query: 86  gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 145
           ||||||||| |||||||| |||||| | || ||||| ||||| || ||||||||||||||
Sbjct: 230 gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 289

                                                                       
Query: 146 tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 205
           |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | ||
Sbjct: 290 tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 349

                                                                       
Query: 206 aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 265
           ||||| ||| ||||||||||| ||||| |||||||||||   | |||| ||||| || ||
Sbjct: 350 aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 409

                                                                       
Query: 266 gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 325
           ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || |||||
Sbjct: 410 gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 469

                                                                       
Query: 326 cgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcgcatc 385
            |||||||| |||||||||||| | |||||| |||||||||| ||||| ||||| ||| |
Sbjct: 470 tgggtcatcggctcaggggcaagtaatttggatccactttggagtcaatagtggtgcaac 529

                                                 
Query: 386 acggtttgctcttgagaatcaagctgtgaatgaagcca 423
           | ||||||||||||||||||||||||| ||||||||||
Sbjct: 530 aaggtttgctcttgagaatcaagctgttaatgaagcca 567
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>ref|XM_479284.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1227

 Score =  289 bits (146), Expect = 4e-75
 Identities = 293/342 (85%)
 Strand = Plus / Plus

                                                                       
Query: 82  aagggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaaga 141
           ||||||||||||| |||||||| |||||| | || |||||||||||||||||||||||||
Sbjct: 302 aagggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaaga 361

                                                                       
Query: 142 agtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttca 201
           |||| ||||| |||||||||||||| || |||||| |||||  |||| ||||||| ||| 
Sbjct: 362 agttccatggggttgctgagaacccaactgagaaaattgtgggcaatcttaaatcattcg 421

                                                                       
Query: 202 ttgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacag 261
           | ||||||| ||| ||||| ||||| |||||||||||||||||   | | || ||||| |
Sbjct: 422 tagaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactg 481

                                                                       
Query: 262 ccgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagag 321
           | ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| ||||
Sbjct: 482 cagggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagag 541

                                                                       
Query: 322 agaacgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcg 381
           |||| |||||||| |||||||||||| | |||||| |||| ||||| || || ||||| |
Sbjct: 542 agaatgggtcatcggctcaggggcaagtaatttggatccattttggagttaatagtggtg 601

                                                     
Query: 382 catcacggtttgctcttgagaatcaagctgtgaatgaagcca 423
           || || ||||||||||||||||||| ||||| || |||||||
Sbjct: 602 caacaaggtttgctcttgagaatcaggctgttaacgaagcca 643
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>gb|BT017484.1| Zea mays clone EL01N0412C09.c mRNA sequence
          Length = 1014

 Score =  281 bits (142), Expect = 9e-73
 Identities = 291/338 (86%), Gaps = 2/338 (0%)
 Strand = Plus / Plus

                                                                       
Query: 82  aagggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaaga 141
           ||||||||||||||||||||||||||||| | || |||||||||||||| ||||||||||
Sbjct: 186 aagggtaaatgggatcagaagggccttcagttgtcactgtccatgttactggatttaaga 245

                                                                       
Query: 142 agtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttca 201
           |||| ||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| 
Sbjct: 246 agttccatggggttgctgagaacccaaccgagaaaattgtgaccaatcttaaatctttct 305

                                                                       
Query: 202 ttgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacag 261
           | |||||| |||||||||||||||||||||| || ||||||||   | ||||||||||||
Sbjct: 306 tggaaaagcgagggttgccaaaaaatcttgtcctcggaagctgcacagttctcgaaacag 365

                                                                       
Query: 262 ccgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagag 321
           | ||| | ||||| ||||  ||| ||||||| |||||||| |||||  ||||||| ||||
Sbjct: 366 caggggaaggggcacttgccacattatataaggttttagagtctgctgttgcagacagag 425

                                                                       
Query: 322 agaac-gggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggc 380
            |||| ||||| || || ||||| ||| | |||||| |||||||||||||||||||||||
Sbjct: 426 -gaactgggtcctcggcacagggacaagtaatttggatccactttggggtcaacagtggc 484

                                                 
Query: 381 gcatcacggtttgctcttgagaatcaagctgtgaatga 418
           |||  | ||||||| |||||||| |||||||| |||||
Sbjct: 485 gcaataaggtttgcccttgagaaccaagctgttaatga 522
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>dbj|AK067207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096M06, full
           insert sequence
          Length = 1228

 Score =  281 bits (142), Expect = 9e-73
 Identities = 292/342 (85%)
 Strand = Plus / Plus

                                                                       
Query: 82  aagggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaaga 141
           ||||||||||||| |||||||| |||||| | || |||||||||||||||||||||||||
Sbjct: 303 aagggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaaga 362

                                                                       
Query: 142 agtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttca 201
           |||| ||||| |||||||||||||| || |||||| ||| |  |||| ||||||| ||| 
Sbjct: 363 agttccatggggttgctgagaacccaactgagaaaattgagggcaatcttaaatcattcg 422

                                                                       
Query: 202 ttgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacag 261
           | ||||||| ||| ||||| ||||| |||||||||||||||||   | | || ||||| |
Sbjct: 423 tagaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactg 482

                                                                       
Query: 262 ccgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagag 321
           | ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| ||||
Sbjct: 483 cagggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagag 542

                                                                       
Query: 322 agaacgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcg 381
           |||| |||||||| |||||||||||| | |||||| |||| ||||| || || ||||| |
Sbjct: 543 agaatgggtcatcggctcaggggcaagtaatttggatccattttggagttaatagtggtg 602

                                                     
Query: 382 catcacggtttgctcttgagaatcaagctgtgaatgaagcca 423
           || || ||||||||||||||||||| ||||| || |||||||
Sbjct: 603 caacaaggtttgctcttgagaatcaggctgttaacgaagcca 644
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  248 bits (125), Expect = 1e-62
 Identities = 239/277 (86%)
 Strand = Plus / Minus

                                                                            
Query: 82       aagggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaaga 141
                ||||||||||||| |||||||| |||||| | || |||||||||||||||||||||||||
Sbjct: 26566893 aagggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaaga 26566834

                                                                            
Query: 142      agtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttca 201
                |||| ||||| |||||||||||||| || |||||| |||||  |||| ||||||| ||| 
Sbjct: 26566833 agttccatggggttgctgagaacccaactgagaaaattgtgggcaatcttaaatcattcg 26566774

                                                                            
Query: 202      ttgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacag 261
                | ||||||| ||| ||||| ||||| |||||||||||||||||   | | || ||||| |
Sbjct: 26566773 tagaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactg 26566714

                                                                            
Query: 262      ccgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagag 321
                | ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| ||||
Sbjct: 26566713 cagggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagag 26566654

                                                     
Query: 322      agaacgggtcatcagctcaggggcaaattatttgggt 358
                |||| |||||||| |||||||||||| | ||||||||
Sbjct: 26566653 agaatgggtcatcggctcaggggcaagtaatttgggt 26566617



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                            
Query: 358      tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 417
                |||| ||||| || || ||||| ||| || ||||||||||||||||||| ||||| || |
Sbjct: 26566455 tccattttggagttaatagtggtgcaacaaggtttgctcttgagaatcaggctgttaacg 26566396

                      
Query: 418      aagcca 423
                ||||||
Sbjct: 26566395 aagcca 26566390
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>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1340_C08
          Length = 192167

 Score =  248 bits (125), Expect = 1e-62
 Identities = 239/277 (86%)
 Strand = Plus / Minus

                                                                          
Query: 82     aagggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaaga 141
              ||||||||||||| |||||||| |||||| | || |||||||||||||||||||||||||
Sbjct: 112164 aagggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaaga 112105

                                                                          
Query: 142    agtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttca 201
              |||| ||||| |||||||||||||| || |||||| |||||  |||| ||||||| ||| 
Sbjct: 112104 agttccatggggttgctgagaacccaactgagaaaattgtgggcaatcttaaatcattcg 112045

                                                                          
Query: 202    ttgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacag 261
              | ||||||| ||| ||||| ||||| |||||||||||||||||   | | || ||||| |
Sbjct: 112044 tagaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactg 111985

                                                                          
Query: 262    ccgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagag 321
              | ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| ||||
Sbjct: 111984 cagggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagag 111925

                                                   
Query: 322    agaacgggtcatcagctcaggggcaaattatttgggt 358
              |||| |||||||| |||||||||||| | ||||||||
Sbjct: 111924 agaatgggtcatcggctcaggggcaagtaatttgggt 111888



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                          
Query: 358    tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 417
              |||| ||||| || || ||||| ||| || ||||||||||||||||||| ||||| || |
Sbjct: 111726 tccattttggagttaatagtggtgcaacaaggtttgctcttgagaatcaggctgttaacg 111667

                    
Query: 418    aagcca 423
              ||||||
Sbjct: 111666 aagcca 111661
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  224 bits (113), Expect = 2e-55
 Identities = 233/273 (85%)
 Strand = Plus / Plus

                                                                            
Query: 86       gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 145
                ||||||||| |||||||| |||||| | || ||||| ||||| || ||||||||||||||
Sbjct: 13760329 gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 13760388

                                                                            
Query: 146      tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 205
                |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | ||
Sbjct: 13760389 tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 13760448

                                                                            
Query: 206      aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 265
                ||||| ||| ||||||||||| ||||| |||||||||||   | |||| ||||| || ||
Sbjct: 13760449 aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 13760508

                                                                            
Query: 266      gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 325
                ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || |||||
Sbjct: 13760509 gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 13760568

                                                 
Query: 326      cgggtcatcagctcaggggcaaattatttgggt 358
                 |||||||| |||||||||||| | ||||||||
Sbjct: 13760569 tgggtcatcggctcaggggcaagtaatttgggt 13760601



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                            
Query: 358      tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 417
                |||||||||| ||||| ||||| ||| || ||||||||||||||||||||||||| ||||
Sbjct: 13760752 tccactttggagtcaatagtggtgcaacaaggtttgctcttgagaatcaagctgttaatg 13760811

                      
Query: 418      aagcca 423
                ||||||
Sbjct: 13760812 aagcca 13760817
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>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1655_B12
          Length = 132736

 Score =  224 bits (113), Expect = 2e-55
 Identities = 233/273 (85%)
 Strand = Plus / Plus

                                                                         
Query: 86    gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 145
             ||||||||| |||||||| |||||| | || ||||| ||||| || ||||||||||||||
Sbjct: 9813  gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 9872

                                                                         
Query: 146   tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 205
             |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | ||
Sbjct: 9873  tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 9932

                                                                         
Query: 206   aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 265
             ||||| ||| ||||||||||| ||||| |||||||||||   | |||| ||||| || ||
Sbjct: 9933  aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 9992

                                                                         
Query: 266   gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 325
             ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || |||||
Sbjct: 9993  gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 10052

                                              
Query: 326   cgggtcatcagctcaggggcaaattatttgggt 358
              |||||||| |||||||||||| | ||||||||
Sbjct: 10053 tgggtcatcggctcaggggcaagtaatttgggt 10085



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                         
Query: 358   tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 417
             |||||||||| ||||| ||||| ||| || ||||||||||||||||||||||||| ||||
Sbjct: 10236 tccactttggagtcaatagtggtgcaacaaggtttgctcttgagaatcaagctgttaatg 10295

                   
Query: 418   aagcca 423
             ||||||
Sbjct: 10296 aagcca 10301
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                            
Query: 358      tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 417
                |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | ||||
Sbjct: 14271886 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 14271945

                    
Query: 418      aagc 421
                ||||
Sbjct: 14271946 aagc 14271949



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                            
Query: 126      gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 185
                ||||| ||||| |||||||| |||||||| |||||||| ||||| |||||  |||||  |
Sbjct: 14271347 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 14271406

                                                   
Query: 186      aatattaaatccttcattgaaaagagagggttgcc 220
                ||| || | || || || |||||||||||||||||
Sbjct: 14271407 aatcttgagtcatttatggaaaagagagggttgcc 14271441
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>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
             sequence
          Length = 158714

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 358   tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 417
             |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | ||||
Sbjct: 21115 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 21174

                 
Query: 418   aagc 421
             ||||
Sbjct: 21175 aagc 21178



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                         
Query: 126   gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 185
             ||||| ||||| |||||||| |||||||| |||||||| ||||| |||||  |||||  |
Sbjct: 20576 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 20635

                                                
Query: 186   aatattaaatccttcattgaaaagagagggttgcc 220
             ||| || | || || || |||||||||||||||||
Sbjct: 20636 aatcttgagtcatttatggaaaagagagggttgcc 20670
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>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNAb0012F18, complete sequence
          Length = 122159

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 358   tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 417
             |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | ||||
Sbjct: 83274 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 83333

                 
Query: 418   aagc 421
             ||||
Sbjct: 83334 aagc 83337



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                         
Query: 126   gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 185
             ||||| ||||| |||||||| |||||||| |||||||| ||||| |||||  |||||  |
Sbjct: 82735 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 82794

                                                
Query: 186   aatattaaatccttcattgaaaagagagggttgcc 220
             ||| || | || || || |||||||||||||||||
Sbjct: 82795 aatcttgagtcatttatggaaaagagagggttgcc 82829
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                            
Query: 358      tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 417
                |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | ||||
Sbjct: 14266861 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 14266920

                    
Query: 418      aagc 421
                ||||
Sbjct: 14266921 aagc 14266924



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                            
Query: 126      gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 185
                ||||| ||||| |||||||| |||||||| |||||||| ||||| |||||  |||||  |
Sbjct: 14266322 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 14266381

                                                   
Query: 186      aatattaaatccttcattgaaaagagagggttgcc 220
                ||| || | || || || |||||||||||||||||
Sbjct: 14266382 aatcttgagtcatttatggaaaagagagggttgcc 14266416
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>dbj|AK099464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023I17, full
           insert sequence
          Length = 1114

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 358 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 417
           |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | ||||
Sbjct: 485 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 544

               
Query: 418 aagc 421
           ||||
Sbjct: 545 aagc 548



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 126 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 185
           ||||| ||||| |||||||| |||||||| |||||||| ||||| |||||  |||||  |
Sbjct: 253 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 312

                                              
Query: 186 aatattaaatccttcattgaaaagagagggttgcc 220
           ||| || | || || || |||||||||||||||||
Sbjct: 313 aatcttgagtcatttatggaaaagagagggttgcc 347
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>dbj|AK062116.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C05, full
           insert sequence
          Length = 1164

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 358 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 417
           |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | ||||
Sbjct: 547 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 606

               
Query: 418 aagc 421
           ||||
Sbjct: 607 aagc 610



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 79/95 (83%)
 Strand = Plus / Plus

                                                                       
Query: 126 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 185
           ||||| ||||| |||||||| |||||||| |||||||| ||||| |||||  |||||  |
Sbjct: 315 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 374

                                              
Query: 186 aatattaaatccttcattgaaaagagagggttgcc 220
           ||| || | || || || |||||||||||||||||
Sbjct: 375 aatcttgagtcatttatggaaaagagagggttgcc 409
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>gb|AC124981.25| Mus musculus chromosome 5, clone RP24-170P20, complete sequence
          Length = 153767

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 12    ccaccaccaccactgctcccag 33
             ||||||||||||||||||||||
Sbjct: 49079 ccaccaccaccactgctcccag 49058
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>gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome 5, complete sequence
          Length = 236596

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 12     ccaccaccaccactgctcccag 33
              ||||||||||||||||||||||
Sbjct: 187072 ccaccaccaccactgctcccag 187051
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>ref|XM_802554.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509567.60) partial mRNA
          Length = 1376

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 12   ccaccaccaccactgctccca 32
            |||||||||||||||||||||
Sbjct: 1051 ccaccaccaccactgctccca 1071
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>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 2       cccaacaatcccaccaccaccactgctcccagg 34
               ||||| |||||||||||| |||| |||||||||
Sbjct: 2494855 cccaataatcccaccaccgccaccgctcccagg 2494823
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>gb|U38308.1|SCU38308 Simian cytomegalovirus major immediate early transcription unit IE94
          Length = 11860

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 13   caccaccaccactgctcccag 33
            |||||||||||||||||||||
Sbjct: 8194 caccaccaccactgctcccag 8214
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>gb|U27902.1|SVU27902 Stealth virus 1 clone 3B546 T7
          Length = 342

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 13  caccaccaccactgctcccag 33
           |||||||||||||||||||||
Sbjct: 217 caccaccaccactgctcccag 197
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>gb|U26035.1|SVU26035 Stealth virus transactivator IE2 homolog, partial cds
          Length = 663

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 13  caccaccaccactgctcccag 33
           |||||||||||||||||||||
Sbjct: 98  caccaccaccactgctcccag 118
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>gb|AF252827.5| Homo sapiens chromosome 8 clone RP11-166E20 map q24.13, complete
             sequence
          Length = 165347

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aatcccaccaccaccactgc 27
             ||||||||||||||||||||
Sbjct: 44790 aatcccaccaccaccactgc 44771
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>emb|CR956650.4| Pig DNA sequence from clone CH242-171I16 on chromosome 6, complete
            sequence
          Length = 165704

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 11   cccaccaccaccactgctcc 30
            ||||||||||||||||||||
Sbjct: 5958 cccaccaccaccactgctcc 5977
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>gb|AC125543.3| Mus musculus BAC clone RP23-360H5 from chromosome 12, complete sequence
          Length = 184081

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   atttgggtccactttggggt 370
             ||||||||||||||||||||
Sbjct: 69536 atttgggtccactttggggt 69517
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>gb|AC165350.3| Mus musculus BAC clone RP23-249A17 from chromosome 12, complete sequence
          Length = 227048

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    atttgggtccactttggggt 370
              ||||||||||||||||||||
Sbjct: 182967 atttgggtccactttggggt 182986
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>emb|AL845512.9| Zebrafish DNA sequence from clone CH211-286M4 in linkage group 4
             Contains the gene for a novel protein similar to mouse and
             human F-box protein 7  (FBXO7), the gene for a novel
             protein similar to human exportin tRNA (nuclear export
             receptor for tRNAs) (XPOT), the gene for a novel protein
             similar to parathyroid hormone-like hormone (PTHLH), the
             3' end of a novel gene, a novel gene and two CpG islands,
             complete sequence
          Length = 192940

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   acactatataaagttttaga 301
             ||||||||||||||||||||
Sbjct: 95755 acactatataaagttttaga 95736
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 303    tctgccattgcagatagaga 322
              ||||||||||||||||||||
Sbjct: 557576 tctgccattgcagatagaga 557557
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>gb|AC100871.2| Homo sapiens chromosome 8, clone RP11-959I15, complete sequence
          Length = 215314

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 8      aatcccaccaccaccactgc 27
              ||||||||||||||||||||
Sbjct: 173738 aatcccaccaccaccactgc 173757
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 239      aagctgtgaaattctcgaaa 258
                ||||||||||||||||||||
Sbjct: 22431499 aagctgtgaaattctcgaaa 22431480
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>gb|AC020604.9| Homo sapiens BAC clone RP11-536C12 from 2, complete sequence
          Length = 130506

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 346   aaattatttgggtccactttgggg 369
             ||||||||||| ||||||||||||
Sbjct: 19973 aaattatttggatccactttgggg 19950
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>gb|AC092667.3| Homo sapiens BAC clone RP11-549H5 from 2, complete sequence
          Length = 172574

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      cccaacaatcccaccaccac 21
              ||||||||||||||||||||
Sbjct: 172405 cccaacaatcccaccaccac 172424
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>gb|AC104782.5| Homo sapiens BAC clone RP11-30G7 from 2, complete sequence
          Length = 150010

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    cccaacaatcccaccaccac 21
            ||||||||||||||||||||
Sbjct: 1831 cccaacaatcccaccaccac 1850
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>gb|AC134462.5| Mus musculus BAC clone RP23-391L12 from chromosome 12, complete sequence
          Length = 197870

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    atttgggtccactttggggt 370
              ||||||||||||||||||||
Sbjct: 141471 atttgggtccactttggggt 141490
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 239      aagctgtgaaattctcgaaa 258
                ||||||||||||||||||||
Sbjct: 22359844 aagctgtgaaattctcgaaa 22359825
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>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 183414

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   aagctgtgaaattctcgaaa 258
             ||||||||||||||||||||
Sbjct: 76035 aagctgtgaaattctcgaaa 76054
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>gb|AC124210.3| Homo sapiens chromosome 8 clone RP11-755E24 map q24.13, complete
             sequence
          Length = 138875

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     aatcccaccaccaccactgc 27
             ||||||||||||||||||||
Sbjct: 42706 aatcccaccaccaccactgc 42687
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>gb|AC130824.4| Mus musculus BAC clone RP23-349B5 from 12, complete sequence
          Length = 178133

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   atttgggtccactttggggt 370
             ||||||||||||||||||||
Sbjct: 99146 atttgggtccactttggggt 99165
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>dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1954F7
          Length = 239057

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 187    atattaaatccttcattgaa 206
              ||||||||||||||||||||
Sbjct: 197532 atattaaatccttcattgaa 197551


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,240,803
Number of Sequences: 3902068
Number of extensions: 4240803
Number of successful extensions: 86664
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86358
Number of HSP's gapped (non-prelim): 302
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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