Clone Information

BLAST Search Result

Clone Name	baal18e14
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein ...	32	0.50
2	CLC1_YEAST (P17891) Clathrin light chain (CLC)	32	0.50
3	SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12 (S...	31	0.65
4	ZN326_MOUSE (O88291) Zinc finger protein 326 (Zinc finger protei...	31	0.65
5	IE68_PRVKA (P24827) Immediate-early protein RSP40	30	1.4
6	RS15_TREPA (O83857) 30S ribosomal protein S15	29	2.5
7	RF2_HELPY (P55999) Peptide chain release factor 2 (RF-2)	29	2.5
8	RF2_HELPJ (Q9ZMR1) Peptide chain release factor 2 (RF-2)	29	2.5
9	SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12 (S...	29	3.2
10	SPT7_YEAST (P35177) Transcriptional activator SPT7	28	4.2
11	AGRB_STAES (P0C0N5) Accessory gene regulator protein B (EC 3.4.-.-)	28	4.2
12	AGRB_STAEQ (Q5HMY5) Accessory gene regulator protein B (EC 3.4.-.-)	28	4.2
13	AGRB_STAEP (P0C0N4) Accessory gene regulator protein B (EC 3.4.-.-)	28	4.2
14	ZITB_ERWCT (Q6D7E5) Zinc transporter zitB	28	4.2
15	DBP8_CRYNE (Q5KPU1) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)	28	5.5
16	TIG_ENTFA (Q837W3) Trigger factor (TF)	28	5.5
17	THR_DROME (P42286) Protein three rows	28	5.5
18	O52A1_HUMAN (Q9UKL2) Olfactory receptor 52A1 (HPFH1OR) (Odorant ...	28	5.5
19	NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1 (Na(+)/K...	28	5.5
20	SENP1_HUMAN (Q9P0U3) Sentrin-specific protease 1 (EC 3.4.22.-) (...	28	5.5
21	SG16_MOUSE (P02815) 16.5 kDa submandibular gland glycoprotein pr...	28	5.5
22	KLF17_HUMAN (Q5JT82) Krueppel-like factor 17 (Zinc finger protei...	28	7.2
23	THIG_CHRVO (Q7NRL4) Thiazole biosynthesis protein thiG	28	7.2
24	YG2D_YEAST (P53246) Hypothetical 98.1 kDa protein in ROM1-UPF3 i...	28	7.2
25	NSBP1_MOUSE (Q9JL35) Nucleosome-binding protein 1 (Nucleosome-bi...	28	7.2
26	MNN4_YEAST (P36044) Protein MNN4	28	7.2
27	ILVD_HELHP (Q7VHW3) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)	27	9.4
28	EFNB1_XENLA (O13097) Ephrin-B1 precursor (EPH-related receptor t...	27	9.4
29	EFNB1_HUMAN (P98172) Ephrin-B1 precursor (EPH-related receptor t...	27	9.4
30	EFNB1_CHICK (O73612) Ephrin-B1 precursor (CEK5 ligand) (CEL5-L)	27	9.4
31	YJU3_SCHPO (Q9URT2) Hypothetical protein P25A2.03 in chromosome III	27	9.4
32	TPN1_SACPS (Q874L4) Vitamin B6 transporter TPN1 (Transport of py...	27	9.4
33	EFNB1_RAT (P52796) Ephrin-B1 precursor (EPH-related receptor tyr...	27	9.4
34	EFNB1_MOUSE (P52795) Ephrin-B1 precursor (EPH-related receptor t...	27	9.4
35	YP158_YEAST (Q99299) Protein YPL158C	27	9.4
36	LOX10_HELTR (P42584) Homeobox protein LOX10 (Fragment)	27	9.4
37	KI21A_MOUSE (Q9QXL2) Kinesin family member 21A	27	9.4
38	GRPE_STAES (Q8CP16) Protein grpE (HSP-70 cofactor)	27	9.4
39	GRPE_STAEQ (Q5HNW5) Protein grpE (HSP-70 cofactor)	27	9.4

>AN32B_HUMAN (Q92688) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member B (PHAPI2 protein) (Silver-stainable protein
           SSP29) (Acidic protein rich in leucines)
          Length = 251

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +3

Query: 150 VELAVEDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAE 299
           VE   +D+++ +E +   + +ED    +D  E     GE+  RET  E E
Sbjct: 200 VEGDEDDDEVSEEEEEFGLDEEDEDEDEDEEEEEGGKGEKRKRETDDEGE 249

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>CLC1_YEAST (P17891) Clathrin light chain (CLC)|
          Length = 233

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 17/57 (29%), Positives = 32/57 (56%)
 Frame = +3

Query: 153 ELAVEDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAEVLVNIKDE 323
           E  ++DE++K+E     +  E  ++ DD  ++ +   EQ + + AKEAE  +  +DE
Sbjct: 134 EKDLKDEELKKE-----LQDEAIKHIDDFYDSYNKKKEQQLEDAAKEAEAFLKKRDE 185

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>SFR12_MOUSE (Q8BZX4) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86)
          Length = 494

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 14/59 (23%), Positives = 31/59 (52%)
 Frame = +3

Query: 165 EDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAEVLVNIKDERSPTKK 341
           +++K ++ERDH S  +E  R+      +GD +G++ V ++    +   + K+  +   K
Sbjct: 400 KEKKREKERDHISDRRERERSTSTKKSSGDRDGKEKVEKSTTPVKEKEHSKESDATVSK 458

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>ZN326_MOUSE (O88291) Zinc finger protein 326 (Zinc finger protein-associated|
           with nuclear matrix of 75 kDa)
          Length = 580

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +3

Query: 168 DEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAE 299
           DE I++E +     +E+   A  V E GD  GE+   E A   E
Sbjct: 494 DEPIEEEEEEEEEEEEEGEEAGSVEEEGDVEGEEGTAEAAAAGE 537

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>IE68_PRVKA (P24827) Immediate-early protein RSP40|
          Length = 364

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 165 EDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAE 299
           EDE  +++ +     +E     D+  E GD +GE +V E   EAE
Sbjct: 212 EDEDEEEDGEEEDEDEEGEEEEDEEEEEGDEDGETDVYEEDDEAE 256

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>RS15_TREPA (O83857) 30S ribosomal protein S15|
          Length = 89

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 150 VELAVEDEKIKQERDHCSVHQED 218
           V++A+  E+I+Q  DHC VH +D
Sbjct: 27  VQIALLTERIRQLTDHCKVHPKD 49

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>RF2_HELPY (P55999) Peptide chain release factor 2 (RF-2)|
          Length = 363

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 150 VELAVEDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQ 269
           + L ++ EKIKQE +     QED     DV +  D N E+
Sbjct: 20  IALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEK 59

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>RF2_HELPJ (Q9ZMR1) Peptide chain release factor 2 (RF-2)|
          Length = 363

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 150 VELAVEDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQ 269
           + L ++ EKIKQE +     QED     DV +  D N E+
Sbjct: 20  IALIIKPEKIKQELERIEKEQEDPNFWQDVLKARDTNKEK 59

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>SFR12_HUMAN (Q8WXA9) Splicing factor, arginine/serine-rich 12|
           (Serine-arginine-rich splicing regulatory protein 86)
           (SRrp86) (Splicing regulatory protein 508) (SRrp508)
          Length = 508

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/59 (23%), Positives = 30/59 (50%)
 Frame = +3

Query: 165 EDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAEVLVNIKDERSPTKK 341
           +D+K ++ERDH S  +E  R+      + D +G++ + + +   +   + K+  S   K
Sbjct: 415 KDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSK 473

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>SPT7_YEAST (P35177) Transcriptional activator SPT7|
          Length = 1332

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 17/65 (26%), Positives = 28/65 (43%)
 Frame = +3

Query: 147 GVELAVEDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAEVLVNIKDER 326
           G+    EDE    E ++      D +N DD  +N D+    N+ E   E  +++NI   +
Sbjct: 228 GISKFAEDEDYDDEDENYDEDSTDVKNVDDPPKNLDSISSSNI-EIDDERRLVLNISISK 286

Query: 327 SPTKK 341
               K
Sbjct: 287 ETLSK 291

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>AGRB_STAES (P0C0N5) Accessory gene regulator protein B (EC 3.4.-.-)|
          Length = 194

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 308 HQNLSLFCSLSNILLAIIVPIFCNVISITVILLMHTTMV 192
           H N SL C + NI+  II P     + I   +L+   +V
Sbjct: 77  HANSSLLCHIQNIIFFIIFPYLIIKLDINYFVLLSMALV 115

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>AGRB_STAEQ (Q5HMY5) Accessory gene regulator protein B (EC 3.4.-.-)|
          Length = 194

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 308 HQNLSLFCSLSNILLAIIVPIFCNVISITVILLMHTTMV 192
           H N SL C + NI+  II P     + I   +L+   +V
Sbjct: 77  HANSSLLCHIQNIIFFIIFPYLIIKLDINYFVLLSMALV 115

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>AGRB_STAEP (P0C0N4) Accessory gene regulator protein B (EC 3.4.-.-)|
          Length = 194

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 308 HQNLSLFCSLSNILLAIIVPIFCNVISITVILLMHTTMV 192
           H N SL C + NI+  II P     + I   +L+   +V
Sbjct: 77  HANSSLLCHIQNIIFFIIFPYLIIKLDINYFVLLSMALV 115

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>ZITB_ERWCT (Q6D7E5) Zinc transporter zitB|
          Length = 320

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 162 VEDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQN 272
           ++ E  + + DHCS HQE+H  A    E  D  G  +
Sbjct: 282 IQMEYQRCDDDHCSFHQENHHLAIHDGEKHDAEGHHH 318

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>DBP8_CRYNE (Q5KPU1) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)|
          Length = 619

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +3

Query: 156 LAVEDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAEVLVNIKDERS 329
           LA +  K K+E +    + E     DDV+  G++ GE +  E         N+K  RS
Sbjct: 34  LAAQKGKQKEESEG---NDESDEEDDDVSNEGEDEGESSGSEAESSVAAQRNLKRRRS 88

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>TIG_ENTFA (Q837W3) Trigger factor (TF)|
          Length = 427

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 150 VELAVEDEKIKQERDHCSVHQEDHRNADDVAENGDNNG 263
           + LAVE+ +I  E  H  VH E HR+ D+   N    G
Sbjct: 293 IRLAVENAEIV-ELPHVMVHDEVHRSMDEFLNNMQRQG 329

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>THR_DROME (P42286) Protein three rows|
          Length = 1379

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 314 NVHQNLSLFCSLSNILLAIIVP 249
           N+HQN  L+C +  I+L  +VP
Sbjct: 54  NLHQNSDLYCDIMGIMLPRVVP 75

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>O52A1_HUMAN (Q9UKL2) Olfactory receptor 52A1 (HPFH1OR) (Odorant receptor|
           HOR3'beta4)
          Length = 312

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -1

Query: 137 FPLK*VVIIHH---IYLPSNITLRISSLLQSCLYLVPCQFYSWH 15
           +PL+   I  H   I + + + LR + L+  CL L+ C+F  +H
Sbjct: 130 YPLRHANIFTHQLVIQIGTMVVLRAAILVAPCLVLIKCRFQFYH 173

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>NCKX1_RAT (Q9QZM6) Sodium/potassium/calcium exchanger 1|
           (Na(+)/K(+)/Ca(2+)-exchange protein 1) (Retinal rod
           Na-Ca+K exchanger)
          Length = 1181

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = +3

Query: 159 AVEDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAEVLVNIKDERSPTK 338
           A ED+  ++E   C   QED    D+    GD  GE+  RET  E +     KDE   T+
Sbjct: 696 APEDKGDQEEDPGC---QED---VDEAEHRGDMTGEEGERETEAEGK-----KDEEGETE 744

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>SENP1_HUMAN (Q9P0U3) Sentrin-specific protease 1 (EC 3.4.22.-)|
           (Sentrin/SUMO-specific protease SENP1)
          Length = 643

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +3

Query: 189 RDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAEVLVNIKDERSPT 335
           +D  ++H   H ++  V    DN    N +    ++ +L+ +KD ++PT
Sbjct: 284 KDSGTLHHPHHHHS--VPHQPDNLAASNTQSEGSDSVILLKVKDSQTPT 330

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>SG16_MOUSE (P02815) 16.5 kDa submandibular gland glycoprotein precursor|
           (Salivary protein 1)
          Length = 138

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
 Frame = +3

Query: 159 AVEDEKIKQERDHCSVHQEDHRNADDVAEN--GDNNGEQNV----RETAKEAEVLVNIKD 320
           +VE+E +  +  + S    +  N +++ +N  GDN  +QN      ET +E+     ++D
Sbjct: 60  SVEEENVNTDDTNTSYEATEEDNKEELNDNSTGDNTSDQNSGVDNTETEEESNAKTKLED 119

Query: 321 ERSPTK 338
            ++  K
Sbjct: 120 MKTVIK 125

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>KLF17_HUMAN (Q5JT82) Krueppel-like factor 17 (Zinc finger protein 393)|
          Length = 389

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 192 DHCSVHQEDHRNADDVAENGDNNGEQN 272
           DH   HQ+ HR      +  +NNGEQ+
Sbjct: 356 DHLKQHQKTHRPGPSDPQANNNNGEQD 382

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>THIG_CHRVO (Q7NRL4) Thiazole biosynthesis protein thiG|
          Length = 264

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = +3

Query: 213 EDHRNADDVAENGDNNGEQNVRETAKEAEVLV 308
           +DHR          NN   NVRET K AEVLV
Sbjct: 95  DDHRFVKLEVLGDPNNLYPNVRETLKAAEVLV 126

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>YG2D_YEAST (P53246) Hypothetical 98.1 kDa protein in ROM1-UPF3 intergenic|
           region
          Length = 860

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 144 HGVELAVEDEKIKQERDHCSVHQEDHRNADDVAENGDN 257
           HG  + +ED +I    DH S H   H   D+  ++ ++
Sbjct: 9   HGDLVTLEDNEIINNSDHSSSHSTSHEEEDEEEDDTED 46

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>NSBP1_MOUSE (Q9JL35) Nucleosome-binding protein 1 (Nucleosome-binding protein|
           45) (NBP-45) (GARP45 protein)
          Length = 406

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 165 EDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAE 299
           E+EK   E+      + D +  +   + GD   E+ V+E  KEAE
Sbjct: 176 EEEKGDNEKGEDGKEEGDEKEEEKDDKEGDTGTEKEVKEQNKEAE 220

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>MNN4_YEAST (P36044) Protein MNN4|
          Length = 1178

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +3

Query: 165  EDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAEVLVNIKDERSPTKK 341
            E+EK KQE +     +E+ +   +  E   N  E+N +   +E +     K+E    KK
Sbjct: 1087 EEEKKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKNEDEEKK-----KNEEEEKKK 1140

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>ILVD_HELHP (Q7VHW3) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 572

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = +3

Query: 150 VELAVEDEKIKQERDHCSVHQEDHRNAD--DVAENGDNNGEQNVRETAKEAEVLVNI 314
           VE+A+++ K +Q R    ++++   NA   D+A  G  N   ++   AKEAEV  N+
Sbjct: 237 VEIALDERKTEQFRFRNILNKKAVHNAFVVDMAMGGSTNTILHMLAIAKEAEVDFNL 293

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>EFNB1_XENLA (O13097) Ephrin-B1 precursor (EPH-related receptor tyrosine kinase|
           ligand 2) (LERK-2) (ELK ligand) (ELK-L) (XlERK)
          Length = 327

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 303 EPQPLLQSLEHSARHYCPHFLQRHQHYGDPL 211
           EP  ++  L  +  +YCPH+ +    YG P+
Sbjct: 279 EPSDIIIPLRTTENNYCPHYEKVSGDYGHPV 309

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>EFNB1_HUMAN (P98172) Ephrin-B1 precursor (EPH-related receptor tyrosine kinase|
           ligand 2) (LERK-2) (ELK ligand) (ELK-L)
          Length = 346

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 303 EPQPLLQSLEHSARHYCPHFLQRHQHYGDPL 211
           EP  ++  L  +  +YCPH+ +    YG P+
Sbjct: 298 EPSDIIIPLRTTENNYCPHYEKVSGDYGHPV 328

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>EFNB1_CHICK (O73612) Ephrin-B1 precursor (CEK5 ligand) (CEL5-L)|
          Length = 334

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 303 EPQPLLQSLEHSARHYCPHFLQRHQHYGDPL 211
           EP  ++  L  +  +YCPH+ +    YG P+
Sbjct: 286 EPSDIIIPLRTTENNYCPHYEKVSGDYGHPV 316

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>YJU3_SCHPO (Q9URT2) Hypothetical protein P25A2.03 in chromosome III|
          Length = 752

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +3

Query: 171 EKIKQERDHCSVHQEDHRNADD-VAENGDNNGEQNVRETAKEAEVLVNIKDERSPTKK 341
           EK+KQ  DH  V +E     +  ++E  +NN  + + E     +   N + +   TKK
Sbjct: 666 EKLKQNDDHFEVTEEITSTINSKISEKQENNVAETILEVTSSPKSSENSQKQSEITKK 723

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>TPN1_SACPS (Q874L4) Vitamin B6 transporter TPN1 (Transport of pyridoxine|
           protein 1)
          Length = 579

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -1

Query: 362 GLCSKASFLGWRPLIFNVHQNLSLFCSLSNILLAIIVPIFCNVI 231
           GL S +SFL   PL+F +    SL  SL ++ +  ++  +C+++
Sbjct: 101 GLSSMSSFL-LGPLLFGLSFRESLASSLISVTIGCLIAAYCSIM 143

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>EFNB1_RAT (P52796) Ephrin-B1 precursor (EPH-related receptor tyrosine kinase|
           ligand 2) (LERK-2) (ELK ligand) (ELK-L)
          Length = 345

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 303 EPQPLLQSLEHSARHYCPHFLQRHQHYGDPL 211
           EP  ++  L  +  +YCPH+ +    YG P+
Sbjct: 297 EPSDIIIPLRTTENNYCPHYEKVSGDYGHPV 327

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>EFNB1_MOUSE (P52795) Ephrin-B1 precursor (EPH-related receptor tyrosine kinase|
           ligand 2) (LERK-2) (ELK ligand) (ELK-L) (STRA1 protein)
           (CEK5 receptor ligand) (CEK5-L)
          Length = 345

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 303 EPQPLLQSLEHSARHYCPHFLQRHQHYGDPL 211
           EP  ++  L  +  +YCPH+ +    YG P+
Sbjct: 297 EPSDIIIPLRTTENNYCPHYEKVSGDYGHPV 327

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>YP158_YEAST (Q99299) Protein YPL158C|
          Length = 758

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = +3

Query: 165 EDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAEVLVNIKDERSPTKK 341
           ED++ ++E +     +ED  + +D  E  +   E   R  AKE + L     E SP +K
Sbjct: 661 EDDEEEEEENDDEEDEEDEEDDEDDEEEEEKRKEGEGRNLAKEVDELA----ELSPMRK 715

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>LOX10_HELTR (P42584) Homeobox protein LOX10 (Fragment)|
          Length = 184

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 9/40 (22%)
 Frame = -3

Query: 129 QVGRHHPSHLPS*QHNPSNFFASP---------KLPLPCP 37
           Q   +H  HLP  QH+ +N+F  P          +PLP P
Sbjct: 15  QTHPNHHHHLPPLQHHANNYFPMPLSTYYPPDSSVPLPFP 54

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>KI21A_MOUSE (Q9QXL2) Kinesin family member 21A|
          Length = 1672

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/55 (25%), Positives = 25/55 (45%)
 Frame = +3

Query: 147 GVELAVEDEKIKQERDHCSVHQEDHRNADDVAENGDNNGEQNVRETAKEAEVLVN 311
           GV     +E   +E    S H+++    +D  E  D  GE++  E+  E++   N
Sbjct: 590 GVSEKENNELDVEENQEVSDHEDEEEEEEDEEEEDDIEGEESSDESDSESDEKAN 644

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>GRPE_STAES (Q8CP16) Protein grpE (HSP-70 cofactor)|
          Length = 210

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 156 LAVEDEKIKQERDHCSVHQEDHRNADDVAENGDN--NGEQNVRETAKEAEVLVNIKDERS 329
           ++ +D+ +    +  +V  ED++N  ++  +  N  N E N  ++   +E   +IKDE S
Sbjct: 1   MSEKDQSVNNTEEDFNVETEDNQNDTNIENSVSNTDNSEANASDSENNSEE--SIKDEES 58

Query: 330 PTK 338
            ++
Sbjct: 59  ESQ 61

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>GRPE_STAEQ (Q5HNW5) Protein grpE (HSP-70 cofactor)|
          Length = 210

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 156 LAVEDEKIKQERDHCSVHQEDHRNADDVAENGDN--NGEQNVRETAKEAEVLVNIKDERS 329
           ++ +D+ +    +  +V  ED++N  ++  +  N  N E N  ++   +E   +IKDE S
Sbjct: 1   MSEKDQSVNNTEEDFNVETEDNQNDTNIENSVSNTDNSEANASDSENNSEE--SIKDEES 58

Query: 330 PTK 338
            ++
Sbjct: 59  ESQ 61


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,729,544
Number of Sequences: 219361
Number of extensions: 853306
Number of successful extensions: 2737
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2728
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result