ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal18e12 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 311 bits (797), Expect = 9e-85 Identities = 155/162 (95%), Positives = 155/162 (95%) Frame = +3 Query: 3 STPPNFLGXXSSSKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQ 182 STP NFLG KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQ Sbjct: 14 STPTNFLGK-KLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQ 72 Query: 183 QDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLV 362 QDITRGKGIVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLV Sbjct: 73 QDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLV 132 Query: 363 VHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 488 VHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI Sbjct: 133 VHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 174
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 278 bits (712), Expect = 6e-75 Identities = 140/164 (85%), Positives = 147/164 (89%), Gaps = 2/164 (1%) Frame = +3 Query: 3 STPPNFLGXXSSSKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWKGLAYDISD 176 STP NFLG KQVTSAVNYHGKSS NRF VMA E +DE + TD +WKGLAYDISD Sbjct: 14 STPTNFLGK-KLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQDRWKGLAYDISD 71 Query: 177 DQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDK 356 DQQDITRGKG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTMGGFYIAP+FMDK Sbjct: 72 DQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPSFMDK 131 Query: 357 LVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 488 LVVH+SKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI Sbjct: 132 LVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 175
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 251 bits (640), Expect = 1e-66 Identities = 123/164 (75%), Positives = 139/164 (84%), Gaps = 3/164 (1%) Frame = +3 Query: 6 TPPNFLGXXSSSKQVTSAVNYHGKSSKAN-RFTVMAAENIDEKRNTD--KWKGLAYDISD 176 T +FLG + QV++AV YHGKSS +N RF MAA+ +DE + TD +WKGLAYDISD Sbjct: 17 TRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISD 76 Query: 177 DQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDK 356 DQQDITRGKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+FDN M GFYIA FMDK Sbjct: 77 DQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDK 136 Query: 357 LVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 488 LVVHLSKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI Sbjct: 137 LVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 180
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 240 bits (613), Expect = 2e-63 Identities = 125/166 (75%), Positives = 139/166 (83%), Gaps = 4/166 (2%) Frame = +3 Query: 3 STPPNFLGXXSSSKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNTD--KWKGLAYDI 170 STP FLG K+V + YHG + +R VMAA+ +D+ + TD +WKGLAYDI Sbjct: 14 STPTIFLG-----KKVKNY--YHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDI 66 Query: 171 SDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFM 350 SDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSYEY+SQGLRKYDFDNTM G YIAPAFM Sbjct: 67 SDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFM 126 Query: 351 DKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 488 DKL+VHL+KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI Sbjct: 127 DKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 172
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 220 bits (561), Expect = 2e-57 Identities = 110/170 (64%), Positives = 130/170 (76%), Gaps = 10/170 (5%) Frame = +3 Query: 9 PPNFLGXXSSSKQVTSA--------VNYHGKSSKANRFTVMAAENIDEKRNTDK--WKGL 158 PPN G SS+ +S VN +SK + ++ ++DE + TDK WKGL Sbjct: 15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGL 74 Query: 159 AYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIA 338 A+D SDDQQDITRGKG VDSLFQAP G GTH A++SSYEY+S GLR+Y+FDN M G+YIA Sbjct: 75 AFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIA 134 Query: 339 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 488 PAFMDKLVVH++KNFMTLPN+K+PLILGIWGGKGQGKSFQCELVFAKM I Sbjct: 135 PAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRI 184
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 218 bits (556), Expect = 8e-57 Identities = 104/149 (69%), Positives = 123/149 (82%) Frame = +3 Query: 42 KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSL 221 K+V + + + K+N + A D++ + D+W+GLAYD SDDQQDITRGKG+VDS+ Sbjct: 36 KKVVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSV 95 Query: 222 FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 401 FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF+TLPNI Sbjct: 96 FQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNI 155 Query: 402 KIPLILGIWGGKGQGKSFQCELVFAKMGI 488 K+PLILGIWGGKGQGKSFQCELV AKMGI Sbjct: 156 KVPLILGIWGGKGQGKSFQCELVMAKMGI 184
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 217 bits (553), Expect = 2e-56 Identities = 105/139 (75%), Positives = 123/139 (88%), Gaps = 1/139 (0%) Frame = +3 Query: 75 KSSKANRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTH 251 K+S N F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH Sbjct: 47 KASSGN-FKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105 Query: 252 EAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWG 431 AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWG Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG 165 Query: 432 GKGQGKSFQCELVFAKMGI 488 GKGQGKSFQCELVFAKMGI Sbjct: 166 GKGQGKSFQCELVFAKMGI 184
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 217 bits (553), Expect = 2e-56 Identities = 105/139 (75%), Positives = 123/139 (88%), Gaps = 1/139 (0%) Frame = +3 Query: 75 KSSKANRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTH 251 K+S N F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP GTH Sbjct: 47 KASSGN-FKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105 Query: 252 EAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWG 431 AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWG Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG 165 Query: 432 GKGQGKSFQCELVFAKMGI 488 GKGQGKSFQCELVFAKMGI Sbjct: 166 GKGQGKSFQCELVFAKMGI 184
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 211 bits (537), Expect = 1e-54 Identities = 103/154 (66%), Positives = 127/154 (82%), Gaps = 2/154 (1%) Frame = +3 Query: 33 SSSKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAYDISDDQQDITRGKG 206 +S K+V S+ + K + + V A + I+E + T D+W+GLAYD+SDDQQDITRGKG Sbjct: 35 TSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKG 94 Query: 207 IVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFM 386 +VDSLFQAP GTH AV+SS++Y+S GLR+Y+FDN GFYIAPAF+DKLVVH++KNFM Sbjct: 95 LVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFM 154 Query: 387 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 488 TLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGI Sbjct: 155 TLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGI 188
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 211 bits (537), Expect = 1e-54 Identities = 101/137 (73%), Positives = 116/137 (84%), Gaps = 4/137 (2%) Frame = +3 Query: 90 NRFTVMAAENID----EKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 257 N+ + AE ID ++ ++D+WKGL D SDDQQDITRGKG+VDSLFQAPTG GTH A Sbjct: 52 NKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHA 111 Query: 258 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 437 VL SYEYVSQGLR+Y+ DN + GFYIAPAFMDKLVVH++KNF+ LPNIK+PLILGIWGGK Sbjct: 112 VLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGK 171 Query: 438 GQGKSFQCELVFAKMGI 488 GQGKSFQCELVF KMGI Sbjct: 172 GQGKSFQCELVFRKMGI 188
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 210 bits (534), Expect = 3e-54 Identities = 95/131 (72%), Positives = 112/131 (85%) Frame = +3 Query: 96 FTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYE 275 F ++A ++ +++ DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYE Sbjct: 51 FKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYE 110 Query: 276 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 455 Y+S GLR Y +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQGKSF Sbjct: 111 YISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSF 170 Query: 456 QCELVFAKMGI 488 QCELVFAKMGI Sbjct: 171 QCELVFAKMGI 181
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 210 bits (534), Expect = 3e-54 Identities = 102/137 (74%), Positives = 116/137 (84%), Gaps = 4/137 (2%) Frame = +3 Query: 90 NRFTVMAAE--NIDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 257 NR +AAE + D K+ T D+WKGL D SDDQQDI RGKG+VDSLFQAPTG GTH A Sbjct: 52 NRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHA 111 Query: 258 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 437 VL SYEYVSQGLR+Y+ DNT+ GFYIAP+FMDKLVVH++KNF+ LPNIK+PLILG+WGGK Sbjct: 112 VLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGK 171 Query: 438 GQGKSFQCELVFAKMGI 488 GQGKSFQCELVF KMGI Sbjct: 172 GQGKSFQCELVFRKMGI 188
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 207 bits (527), Expect = 2e-53 Identities = 101/137 (73%), Positives = 113/137 (82%) Frame = +3 Query: 78 SSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 257 SS+ TV AAEN E++NTDKW LA D SDDQ DI RGKG+VDSLFQAP GTH Sbjct: 48 SSRTTSMTVKAAEN--EEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVP 105 Query: 258 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 437 + SS+EY SQGLRKYD DN +G FYIAPAFMDKLVVH++KNF+ LPNIKIPLILG+WGGK Sbjct: 106 IQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGK 165 Query: 438 GQGKSFQCELVFAKMGI 488 GQGKSFQCELVFAK+GI Sbjct: 166 GQGKSFQCELVFAKLGI 182
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 204 bits (520), Expect = 1e-52 Identities = 108/164 (65%), Positives = 124/164 (75%), Gaps = 2/164 (1%) Frame = +3 Query: 3 STPPNFLGXXSSSKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAYDISD 176 S P + S K V S V + K + + V A + I+E + T D+WKGLAYDISD Sbjct: 26 SAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISD 84 Query: 177 DQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDK 356 DQQDITRGKG+VD LFQAP GTH AV+SSYEY+S GLR+ DN GFYIAPAF+DK Sbjct: 85 DQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLDK 142 Query: 357 LVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 488 LVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI Sbjct: 143 LVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI 186
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 204 bits (519), Expect = 1e-52 Identities = 95/134 (70%), Positives = 113/134 (84%) Frame = +3 Query: 87 ANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 266 +NR + A+ +DE + D+WKGL + SDDQQDI RGKG+VDSLFQAPTG GTH A+++ Sbjct: 51 SNRNLRVVAQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMN 109 Query: 267 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 446 SYEYVSQ L+ Y DN + GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG+WGGKGQG Sbjct: 110 SYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQG 169 Query: 447 KSFQCELVFAKMGI 488 KSFQCELVF KMGI Sbjct: 170 KSFQCELVFRKMGI 183
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 146 bits (369), Expect = 4e-35 Identities = 71/123 (57%), Positives = 91/123 (73%), Gaps = 3/123 (2%) Frame = +3 Query: 129 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 299 ++ +W+ + D SDDQQDITRG+ +VD LFQ G GTH AVLSS EY+SQ + Sbjct: 37 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94 Query: 300 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 479 F+N GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K Sbjct: 95 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154 Query: 480 MGI 488 +GI Sbjct: 155 LGI 157
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 85.5 bits (210), Expect = 1e-16 Identities = 35/55 (63%), Positives = 47/55 (85%) Frame = +3 Query: 327 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGIK 491 +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG++ Sbjct: 3 YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVE 57
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 85.1 bits (209), Expect = 1e-16 Identities = 35/55 (63%), Positives = 47/55 (85%) Frame = +3 Query: 327 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGIK 491 +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI+ Sbjct: 3 YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIE 57
>POLG_CXB3W (Q66282) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2184 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/60 (23%), Positives = 30/60 (50%) Frame = -3 Query: 526 SLGRK*MNVNSYLMPILANTSSHWNDFP*PLPPQIPKMSGILMLGRVMKFLERWTTSLSM 347 ++G K ++ +Y +P+ +N S F PL P + +LG ++ + W+ S+ + Sbjct: 388 NVGEKVNSMEAYQIPVRSNEGSGTQVFGFPLQPGYSSVFSRTLLGEILNYYTHWSGSIKL 447
>POLG_CXB3N (P03313) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2184 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/60 (23%), Positives = 30/60 (50%) Frame = -3 Query: 526 SLGRK*MNVNSYLMPILANTSSHWNDFP*PLPPQIPKMSGILMLGRVMKFLERWTTSLSM 347 ++G K ++ +Y +P+ +N S F PL P + +LG ++ + W+ S+ + Sbjct: 388 NVGEKVNSMEAYQIPVRSNEGSGTQVFGFPLQPGYSSVFSRTLLGEILNYYTHWSGSIKL 447
>TOR2A_XENLA (Q68F68) Torsin-2A precursor (Torsin family 2 member A)| Length = 314 Score = 32.0 bits (71), Expect = 1.3 Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 10/135 (7%) Frame = +3 Query: 207 IVDSLFQAPTGDGTHEAV---LSSYEYVSQGLR------KYDFDNTMGGFYIAPAFMDKL 359 I+ L P G E + S Y + G + D + G ++A + K Sbjct: 7 IIPMLLLVPGSSGAWEVLSLPFSLYNFYECGFKVDIEALDCDLARNVFGQHLAQELLFKS 66 Query: 360 VVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGIK-*EFTFIYFLPKEILL 536 V K F+ N PL+L + G G GK+F L+ + + + F++F + Sbjct: 67 V----KEFIESDNPSKPLVLSLHGWSGTGKTFVSSLLVKHLFKEGSQSRFVHFFSPVLHF 122 Query: 537 PPFHNISHFRDFTKG 581 P N+ ++ KG Sbjct: 123 PRVQNLEQYKVDLKG 137
>G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 548 Score = 32.0 bits (71), Expect = 1.3 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +3 Query: 276 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 455 Y SQ + YD M Y+ M+ H++ T+P +P+I G+ G GQ + Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387 Query: 456 QC 461 QC Sbjct: 388 QC 389
>DME_ARATH (Q8LK56) Transcriptional activator DEMETER (DNA glycosylase-related| protein DME) Length = 1729 Score = 31.6 bits (70), Expect = 1.7 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Frame = +3 Query: 3 STPPNFLGXXSSSKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQ 182 S+ N L +SS + +AV Y K + A M D K+ T +W L D+ ++ Sbjct: 1146 SSLQNILVESNSSNKEQTAVEY--KETNATILREMKGTLADGKKPTSQWDSLRKDVEGNE 1203 Query: 183 QDITRGKGIVDSLFQAPTGDGTHEAV-LSSYEYVSQGLRKYDFDNTM 320 R K +DS+ +EA+ +S +S+ +++ +N + Sbjct: 1204 GRQERNKNNMDSI--------DYEAIRRASISEISEAIKERGMNNML 1242
>PCRB_SULAC (Q4JAS3) Protein pcrB homolog| Length = 257 Score = 31.2 bits (69), Expect = 2.3 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = -2 Query: 332 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 156 +EA G E V P+A+ V +DG+V EER + + +G ++V G+++ + Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234
>PTR2_CANAL (P46030) Peptide transporter PTR2| Length = 623 Score = 31.2 bits (69), Expect = 2.3 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%) Frame = -3 Query: 244 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 98 P+P+ AWK+ S CW + E++Y R ++FL S FSAA+++ Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546
>POLG_SVDVU (P13900) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A) (P2-3B); Core protein P2B (P2-5B); Core protein P2C (P2-X); C Length = 2184 Score = 30.8 bits (68), Expect = 3.0 Identities = 13/56 (23%), Positives = 29/56 (51%) Frame = -3 Query: 514 K*MNVNSYLMPILANTSSHWNDFP*PLPPQIPKMSGILMLGRVMKFLERWTTSLSM 347 K M++ +Y +P+ +N ++ F PL P + +LG ++ + W+ S+ + Sbjct: 390 KVMSIEAYQIPVQSNPTNGSQVFGFPLTPGANSVLNRTLLGEILNYYAHWSGSIKL 445
>POLG_SVDVH (P16604) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A) (P2-3B); Core protein P2B (P2-5B); Core protein P2C (P2-X); C Length = 2184 Score = 30.8 bits (68), Expect = 3.0 Identities = 13/56 (23%), Positives = 29/56 (51%) Frame = -3 Query: 514 K*MNVNSYLMPILANTSSHWNDFP*PLPPQIPKMSGILMLGRVMKFLERWTTSLSM 347 K M++ +Y +P+ +N ++ F PL P + +LG ++ + W+ S+ + Sbjct: 390 KVMSIEAYQIPVQSNPTNGSQVFGFPLTPGANSVLNRTLLGEILNYYAHWSGSIKL 445
>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa| protein) (ORF 2) Length = 142 Score = 30.8 bits (68), Expect = 3.0 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = -3 Query: 526 SLGRK*MNVNSYLMPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 350 S R M + M I++ TSS W P PL PPQ+P + ++ R + + T S S Sbjct: 36 SASRSQMAYSRPTMSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94
>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 251 Score = 30.4 bits (67), Expect = 3.9 Identities = 26/95 (27%), Positives = 42/95 (44%) Frame = -2 Query: 437 LASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRSDVEASHGVVEVVLPQALADVLVGAED 258 L T++E + G ++ G + L +E G E + P+A DVL+ AE Sbjct: 158 LVEVHTREELTAALAAGADIVGINNRDL-----GKLEVDLGTFEELAPEAPEDVLLVAES 212 Query: 257 GLVGAVARGRLEERVHDALPSGDVLLVVGDIVRKT 153 G+ R+ E DAL G ++ GD+ + T Sbjct: 213 GVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246
>ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.4 bits (67), Expect = 3.9 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 189 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 359 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRSVVTFINTAGAYPGVGAEERGQ 121 Query: 360 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 446 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 5.0 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 189 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 359 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 360 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 446 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 5.0 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 189 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 359 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 360 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 446 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.0 bits (66), Expect = 5.0 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +3 Query: 189 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 359 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 121 Query: 360 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 446 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 30.0 bits (66), Expect = 5.0 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -2 Query: 404 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 240 + +G H ++DN+ + ++S+ A+H + + P+AL + LV A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISFPEALQNPVHLVIANILLAPLI 233 Query: 239 ARGRLEERVHDALPSGDVLLVVG 171 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253
>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 208 Score = 30.0 bits (66), Expect = 5.0 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +3 Query: 402 KIPLILGIWGGKGQGKSFQCELVFAKMG 485 ++PL++G+ GG G GKS C ++ A+MG Sbjct: 4 RLPLLVGVTGGIGSGKSTVCAML-AEMG 30
>DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1060 Score = 29.6 bits (65), Expect = 6.6 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%) Frame = +3 Query: 63 NYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGD 242 N+H K + + A + D R LAY+++D + D +F A +G Sbjct: 807 NFHKKENILPLIQIGAFDYADSNRGK-----LAYNLADHANLLNYYS---DDIFMASSGG 858 Query: 243 GT--HEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 401 G HEA E S+ KYDF+ + G + P + L NF L + Sbjct: 859 GFAYHEA-----EDYSE-TEKYDFEKNLLGIGVTPHPLQNLARRFEGNFTPLAQL 907
>RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107| Length = 1070 Score = 29.3 bits (64), Expect = 8.6 Identities = 14/53 (26%), Positives = 28/53 (52%) Frame = +3 Query: 75 KSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAP 233 K + + +++ E++ K++TDK+ L +SD+ I K V+S + P Sbjct: 688 KQGEESTGKLISTEDVTSKKDTDKFSHLFEGLSDNDDHINDEKPAVNSKYTTP 740
>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC| 3.1.3.48) (Protein tyrosine phosphatase PTP-BL) (Protein-tyrosine phosphatase RIP) (protein tyrosine phosphatase DPZPTP) (PTP36) Length = 2453 Score = 29.3 bits (64), Expect = 8.6 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +3 Query: 165 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRK 299 D S +D RGKG+ THEA LS +V++GL K Sbjct: 195 DRSQAIRDRLRGKGLPTGRSSTSDALDTHEAPLSQQTFVNKGLSK 239
>PRMA_LEGPL (Q5WZ79) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 29.3 bits (64), Expect = 8.6 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -2 Query: 404 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 240 + +G H ++DN+ + ++S+ A+H + + P+AL + LV A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISSPEALQNPVHLVIANILLAPLI 233 Query: 239 ARGRLEERVHDALPSGDVLLVVG 171 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253
>PRMA_LEGPA (Q5X7S8) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 29.3 bits (64), Expect = 8.6 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -2 Query: 404 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 240 + +G H ++DN+ + ++S+ A+H + + P+AL + L+ A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISTPEALQNPVHLIIANILLAPLI 233 Query: 239 ARGRLEERVHDALPSGDVLLVVG 171 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,741,665 Number of Sequences: 219361 Number of extensions: 1606372 Number of successful extensions: 4997 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4838 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4988 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
