ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal18d17 |
|---|---|
| Clone Library Name | barley_pub |
>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 361 Score = 36.2 bits (82), Expect = 0.061 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 2/95 (2%) Frame = +3 Query: 237 PQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAM--TVPVLTAEGRE 410 P N PA A A APV+T++ + + A T ++ P PV+ V A G+ Sbjct: 7 PANVPPATAAAAPAPVVTAAPASAPTPSTPAPTPAATPAASPAPVSSDPAVAAPAAPGQT 66 Query: 411 EQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREV 515 + Q PS+ A+ P P V L V Sbjct: 67 PASAPAPAQTPAPSQPGPALPGPFPGGRVVRLHPV 101
>RHO_MYCTU (P66028) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 35.8 bits (81), Expect = 0.080 Identities = 24/52 (46%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = +2 Query: 8 RTNDADDHGSGDGQADGREDHRG--DAEARGGPHRRRLRDPQVPAVRRRRGD 157 R DA GD QA G + RG D EAR G RR RD RRRRG+ Sbjct: 162 RGTDAGGDQGGDQQASGGQQARGDEDGEARQGRRGRRFRD------RRRRGE 207
>RHO_MYCBO (P66029) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 602 Score = 35.8 bits (81), Expect = 0.080 Identities = 24/52 (46%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = +2 Query: 8 RTNDADDHGSGDGQADGREDHRG--DAEARGGPHRRRLRDPQVPAVRRRRGD 157 R DA GD QA G + RG D EAR G RR RD RRRRG+ Sbjct: 162 RGTDAGGDQGGDQQASGGQQARGDEDGEARQGRRGRRFRD------RRRRGE 207
>ZF64A_HUMAN (Q9NPA5) Zinc finger protein 64, isoforms 1 and 2 (Zinc finger| protein 338) Length = 681 Score = 35.0 bits (79), Expect = 0.14 Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 25/205 (12%) Frame = +3 Query: 3 SVEQTTPTTMGLAMAKLMVG----------KIIV--ETPKHEVVHTGDGYEIRKYPPCVA 146 S + TP T+G L KIIV + P+ + + PP + Sbjct: 468 SKQPATPLTVGHLQVPLQPSQVPQFSEGRVKIIVGHQVPQANTIVQAAAAAVNIVPPALV 527 Query: 147 AEVTYDPKEMKGDRDGGFQVLANYIGAFGKPQNTK-PAEAIAMTAPVITSSSSGSGEAEP 323 A+ +P+E+ G+ Q+L + PQ+++ P+EA AMT P + ++ + Sbjct: 528 AQ---NPEELPGN--SRLQILRQ-VSLIAPPQSSRCPSEAGAMTQPAVLLTTHEQTDGAT 581 Query: 324 IAMTAPVITSSEPEPVAMTVPVLTAEG------------REEQTGKVTMQFLLPSKYAKA 467 + T S P+ + +T+ G +E T +VT+ A A Sbjct: 582 LHQTLIPTASGGPQEGSGNQTFITSSGITCTDFEGLNALIQEGTAEVTVVSDGGQNIAVA 641 Query: 468 VEAPRPTDERVVLREVPERKYAVVR 542 AP P +E+P++ Y++++ Sbjct: 642 TTAP-PVFSSSSQQELPKQTYSIIQ 665
>LRC50_HUMAN (Q8NEP3) Leucine-rich repeat-containing protein 50| Length = 725 Score = 34.3 bits (77), Expect = 0.23 Identities = 24/77 (31%), Positives = 34/77 (44%) Frame = +3 Query: 234 KPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREE 413 +P+ T PAE + +++PV G GE E T P P P V V +G +E Sbjct: 411 EPEGTLPAETLLLSSPVEVKGEDGDGEPEG---TLPAEAPPPPPP----VEVKGEDGDQE 463 Query: 414 QTGKVTMQFLLPSKYAK 464 G + + LL S K Sbjct: 464 PEGTLPAETLLLSPPVK 480 Score = 29.3 bits (64), Expect = 7.5 Identities = 31/107 (28%), Positives = 40/107 (37%) Frame = +3 Query: 165 PKEMKGDRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPV 344 P E+KG+ DG G+P+ T PAEA PV G E E + A Sbjct: 426 PVEVKGE-DGD-----------GEPEGTLPAEAPPPPPPVEVKGEDGDQEPEG-TLPAET 472 Query: 345 ITSSEPEPVAMTVPVLTAEGREEQTGKVTMQFLLPSKYAKAVEAPRP 485 + S P V V +G E G + + P A E P P Sbjct: 473 LLLSPP------VKVKGEDGDREPEGTLPAEAPPPLPLGAAREEPTP 513
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 33.9 bits (76), Expect = 0.30 Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%) Frame = +3 Query: 231 GKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTA-PVITSSEPE--PVAMTVPVLTAE 401 G+P + PA+A +P T +S + +A P A A P T + P+ P+ T P T+ Sbjct: 560 GQPSGSLPAKA----SPQATKASPQATKASPQATKASPQTTKASPQAKPLRATEPSKTSS 615 Query: 402 GREEQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPERKYAVVR 542 +E+ AKA P+P E V P+ K V R Sbjct: 616 SAQEKKTATP---------AKAEPVPKPPPETTVPPGTPKAKSGVKR 653
>HEMH_MYCAV (O07401) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 335 Score = 33.9 bits (76), Expect = 0.30 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = +2 Query: 44 GQADGREDHRGDAEARGGPHRRRL-RDPQVPAVRRRRGD 157 G AD R R D A G P RL R PQ+ A+RRR G+ Sbjct: 50 GVADQRHQPRADRAAAGRPEPARLLRQPQLGALRRRHGE 88
>HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-) (Protein| pam/highwire/rpm-1) Length = 5233 Score = 33.5 bits (75), Expect = 0.40 Identities = 24/80 (30%), Positives = 31/80 (38%) Frame = +3 Query: 255 AEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVTM 434 AE P +T S+SG EP EP+P + P T GR + T Sbjct: 3121 AEEDVEEQPPVTPSASGEASPEP-----------EPDPSPVLSPAKTKPGRFLSGHQSTN 3169 Query: 435 QFLLPSKYAKAVEAPRPTDE 494 FL P+K+A E E Sbjct: 3170 PFLYPAKHADLAEREAQVQE 3189
>HEBP2_HUMAN (Q9Y5Z4) Heme-binding protein 2 (Protein SOUL) (Placental protein| 23) (PP23) Length = 205 Score = 32.3 bits (72), Expect = 0.88 Identities = 32/107 (29%), Positives = 44/107 (41%), Gaps = 5/107 (4%) Frame = +3 Query: 114 YEIRKYPPCVAAEVTYDPKEMKGDRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITS 293 YEIR Y P + + + GF L +YI + +N K + I MTAPV + Sbjct: 38 YEIRHYGPAKWVSTSVESMDWDSAIQTGFTKLNSYI----QGKNEKEMK-IKMTAPVTSY 92 Query: 294 SSSGSGEAEPIAMTAPVITSSE-----PEPVAMTVPVLTAEGREEQT 419 GSG +T + SE P P+ V + E R E T Sbjct: 93 VEPGSGPFSESTITISLYIPSEQQFDPPRPLESDVFI---EDRAEMT 136
>PLS_STAES (Q8CQD9) Accumulation-associated protein precursor| Length = 1469 Score = 32.0 bits (71), Expect = 1.1 Identities = 47/170 (27%), Positives = 64/170 (37%), Gaps = 29/170 (17%) Frame = +3 Query: 15 TTPTTMG-LAMAKLMVGKI---IVETPKHEVVHTGDGYEIRKYPPCVAAEVTYDPKEMKG 182 TTPTT L K+ G+ + + P E+VH G G EI+ + +DP KG Sbjct: 875 TTPTTKNPLTGEKVGEGEPTEKVTKQPVDEIVHYG-GEEIKP-----GHKDEFDPNAPKG 928 Query: 183 DRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMT--------- 335 ++ GKP P +T PV + G + +PI T Sbjct: 929 SQED----------VPGKPGVKNPDTGEVVTPPVDDVTKYGPVDGDPITSTEEIPFDKKR 978 Query: 336 ------AP----VITSSEPEPVAMTVPV----LTAE--GREEQTGKVTMQ 437 AP V+ EP +T P LT E G E T K+T Q Sbjct: 979 EFDPNLAPGTEKVVQKGEPGTKTITTPTTKNPLTGEKVGEGEPTEKITKQ 1028 Score = 30.4 bits (67), Expect = 3.3 Identities = 48/170 (28%), Positives = 63/170 (37%), Gaps = 29/170 (17%) Frame = +3 Query: 15 TTPTTMG-LAMAKLMVGKI---IVETPKHEVVHTGDGYEIRKYPPCVAAEVTYDPKEMKG 182 TTPTT L K+ G+ I + P E+VH G G EI+ + +DP KG Sbjct: 1003 TTPTTKNPLTGEKVGEGEPTEKITKQPVDEIVHYG-GEEIKP-----GHKDEFDPNAPKG 1056 Query: 183 DRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMT--------- 335 + GKP P +T PV + G + +PI T Sbjct: 1057 SQTT----------QPGKPGVKNPDTGEVVTPPVDDVTKYGPVDGDPITSTEEIPFDKKR 1106 Query: 336 ------AP----VITSSEPEPVAMTVPV----LTAE--GREEQTGKVTMQ 437 AP V+ EP +T P LT E G E T K+T Q Sbjct: 1107 EFDPNLAPGTEKVVQKGEPGTKTITTPTTKNPLTGEKVGEGEPTEKITKQ 1156 Score = 29.6 bits (65), Expect = 5.7 Identities = 47/170 (27%), Positives = 61/170 (35%), Gaps = 29/170 (17%) Frame = +3 Query: 15 TTPTTMG-LAMAKLMVGKI---IVETPKHEVVHTGDGYEIRKYPPCVAAEVTYDPKEMKG 182 TTPTT L K+ G+ I + P E+VH G G EI+ + +DP KG Sbjct: 747 TTPTTKNPLTGEKVGEGEPTEKITKQPVDEIVHYG-GEEIKP-----GHKDEFDPNAPKG 800 Query: 183 DRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAP------- 341 ++ GKP P +T PV + G + +PI T Sbjct: 801 SQED----------VPGKPGVKNPDTGEVVTPPVDDVTKYGPVDGDPITSTEEIPFDKKR 850 Query: 342 ------------VITSSEPEPVAMTVPV----LTAE--GREEQTGKVTMQ 437 V EP +T P LT E G E T KVT Q Sbjct: 851 EFNPDLKPGEERVKQKGEPGTKTITTPTTKNPLTGEKVGEGEPTEKVTKQ 900
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 32.0 bits (71), Expect = 1.1 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 1/98 (1%) Frame = +3 Query: 231 GKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGRE 410 G+P + P +A A ++ S +A+P+ + P TSS +PV + Sbjct: 558 GQPSGSLPPKASPQAAKASPQAAKASPQAKPLRASEPSKTSSSAPEKKTGIPV-----KA 612 Query: 411 EQTGKVTMQFLLPSKYAKAVEAPRPTDERV-VLREVPE 521 E K + +P KA + TD V++ VPE Sbjct: 613 EPVPKPPPETAVPPGTPKAKSGVKRTDPATPVVKPVPE 650
>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2| Length = 997 Score = 32.0 bits (71), Expect = 1.1 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 1/83 (1%) Frame = +3 Query: 234 KPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREE 413 +PQ+ +PA+A A P + + + EP AP +EP A V V E + Sbjct: 162 EPQSEQPAQAEAQPEPTPAAQAEPEPQPEPQPEAAPAQAVAEPVEPAKNVSVTETEAEQA 221 Query: 414 QTGKVT-MQFLLPSKYAKAVEAP 479 + V Q L SK V P Sbjct: 222 RPEPVVHAQTELTSKTPAPVAQP 244
>ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (110 kDa cell| membrane glycoprotein) (Gp110) (ARM-1) Length = 407 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/54 (27%), Positives = 28/54 (51%) Frame = +3 Query: 207 LANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEP 368 LA+ +G+ G P ++ + + + +A V SSS+ S A P +++ P P Sbjct: 191 LASLLGSSGPPASSSSSSSRSQSAAVTPSSSTSSARATPAPSAPAAASATSPSP 244
>GRA6_TOXGO (Q27003) Dense granule protein 6 (Protein GRA 6) (Antigen p32)| (Protein p33) Length = 230 Score = 31.6 bits (70), Expect = 1.5 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Frame = +3 Query: 192 GGFQVLANYIGAFGKPQNTKPA----EAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSE 359 GG V A+ G P T + EA+ T + SS+ G G+ + +A TS Sbjct: 38 GGVAVAADSGGVKQTPSETGSSGGQQEAVGTTEDYVNSSAMGGGQGDSLA--EDDTTSEA 95 Query: 360 PEPVAMTVPVLTAEGREEQTG 422 E PVL EG+ E G Sbjct: 96 AEGDVDPFPVLANEGKSEARG 116
>TNR8_HUMAN (P28908) Tumor necrosis factor receptor superfamily member 8| precursor (CD30L receptor) (Lymphocyte activation antigen CD30) (KI-1 antigen) Length = 595 Score = 31.2 bits (69), Expect = 2.0 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Frame = +3 Query: 129 YPPCVAAEVTYDPKEMKGDRDGGFQV--LANYIGAFGKPQNTKPAEAIAMTAPVITSSSS 302 YP C A VT P++M ++D F+ L P+N + + + T ++ S + Sbjct: 303 YPICAAETVT-KPQDM-AEKDTTFEAPPLGTQPDCNPTPENGEAPASTSPTQSLLVDSQA 360 Query: 303 GSGEAEPIAMTAPVITSSEPEPVAMTVPVL 392 + PI +APV SS +PV PVL Sbjct: 361 S--KTLPIPTSAPVALSSTGKPVLDAGPVL 388
>CMTA2_HUMAN (O94983) Calmodulin-binding transcription activator 2| Length = 1202 Score = 31.2 bits (69), Expect = 2.0 Identities = 24/74 (32%), Positives = 36/74 (48%) Frame = +3 Query: 267 AMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVTMQFLL 446 A T+P +SSSS SG AEP+ + TS T +L G E++ G +T Sbjct: 286 AHTSPSSSSSSSSSGFAEPLEIRPSPPTSRGGSSRGGTA-ILLLTGLEQRAGGLT----- 339 Query: 447 PSKYAKAVEAPRPT 488 P+++ PRP+ Sbjct: 340 PTRHLAPQADPRPS 353
>HMW1_MYCPN (Q50365) Cytadherence high molecular weight protein 1 (Cytadherence| accessory protein 1) Length = 1018 Score = 31.2 bits (69), Expect = 2.0 Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 6/100 (6%) Frame = +3 Query: 240 QNTKPAEAIA-MTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEG---- 404 Q +P E A M P + +PI TAP++ EP+ V T P + AE Sbjct: 231 QLEQPVEVQAEMVQPEVAVEPQLEVSLDPIGETAPILEQVEPQAV-QTQPEIPAEQSAVE 289 Query: 405 -REEQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPE 521 + E +V + + P A+ V + T+ V+ + E Sbjct: 290 LQPEPVAEVQSEMVQPEAAAEPVTEAQQTEPTPVVETIAE 329
>NDF4_XENLA (P79920) Neurogenic differentiation factor 4 (NeuroD4) (Atonal| protein homolog 3) (Helix-loop-helix protein xATH-3) (XATH3) Length = 315 Score = 31.2 bits (69), Expect = 2.0 Identities = 13/43 (30%), Positives = 24/43 (55%) Frame = +2 Query: 23 DDHGSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRRRR 151 ++ GS DG+ D E+ G+ + GP ++++ +V R RR Sbjct: 38 EERGSIDGEEDDEEEEDGEKPKKRGPKKKKMTKARVERFRVRR 80
>CPN_DROME (Q02910) Calphotin| Length = 864 Score = 30.4 bits (67), Expect = 3.3 Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 1/76 (1%) Frame = +3 Query: 255 AEAIAMTAPVITSSSSGSGEAE-PIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVT 431 A A+ PVI S S AE P+ + PV+ EPV V T E + VT Sbjct: 385 ASAVPELPPVIAPSPVPSAVAETPVDLAPPVLPPVAAEPVPAVVAEETPETPAPASAPVT 444 Query: 432 MQFLLPSKYAKAVEAP 479 + L + A + AP Sbjct: 445 IAALDIPEVAPVIAAP 460
>RDRP_TCV (P17460) Probable RNA-directed RNA polymerase (EC 2.7.7.48)| (Protein p88) [Contains: Protein p28] Length = 775 Score = 30.4 bits (67), Expect = 3.3 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%) Frame = -3 Query: 361 GSEEVITGAVM-AIGSASPLPEEEEVMTG--AVMAIASAGLVFCGLPK 227 G+EE T ++ A+GS + +P G A+ A+ +A L FCG+PK Sbjct: 96 GTEEEATSCLVEAVGSTADVPRRRVRQKGRFAMHAVNAAKLHFCGVPK 143
>XPSN_XANCP (P29040) General secretion pathway protein N (Protein xpsN)| Length = 261 Score = 30.4 bits (67), Expect = 3.3 Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 7/133 (5%) Frame = +3 Query: 147 AEVTYDPKE-----MKGDRDGGFQVLANY--IGAFGKPQNTKPAEAIAMTAPVITSSSSG 305 A +T DP + + GD G+++LA P T+ E ++ Sbjct: 111 ATLTLDPADSVRVQLGGDAVKGYRLLALQPRSATIEGPGGTQTLELQVFNGQGGQPPTAI 170 Query: 306 SGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVTMQFLLPSKYAKAVEAPRP 485 G + P+ + P P P AE ++Q G + P + A EAPRP Sbjct: 171 GGRPQAPGAVPPLPPNVPPAPATPAPP--PAEVPQQQPGGQAPPTVPPQRSDGAQEAPRP 228 Query: 486 TDERVVLREVPER 524 +DE+ +R + ER Sbjct: 229 SDEQ--MRAIRER 239
>IF4G_SCHPO (Q10475) Eukaryotic translation initiation factor 4 gamma| (eIF-4-gamma) (eIF-4G) Length = 1403 Score = 30.0 bits (66), Expect = 4.4 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = +3 Query: 288 TSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVTMQFLLPSK 455 TSS G A P+ TS E P TVP+ Q G +T +PSK Sbjct: 132 TSSQIGKDNAAPVENVNEKSTSQETAPPVSTVPI--------QFGSITRNAAIPSK 179
>PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (mPH1) (Early development| regulatory protein 1) (RAE-28) Length = 1012 Score = 30.0 bits (66), Expect = 4.4 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 8/105 (7%) Frame = +3 Query: 231 GKPQNTKPAEAIAMT-APVITSS---SSGSGEAEPIAMTAPV---ITSSEPEPVAMTVPV 389 G Q PA A MT APV ++ G + P+ P + S A T+ V Sbjct: 588 GALQECPPALAAGMTLAPVQGTAHVVKGGPTASSPVVAQVPAAFYMQSVHLPGKAQTLAV 647 Query: 390 LT-AEGREEQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPE 521 AE EE+ + +LP+K + A E+P+ +E+ L E E Sbjct: 648 KRKAESEEERDDLSALASVLPTKASPAAESPKVIEEKNSLGEKAE 692
>AN32A_RAT (P49911) Acidic leucine-rich nuclear phosphoprotein 32 family| member A (Leucine-rich acidic nuclear protein) Length = 247 Score = 30.0 bits (66), Expect = 4.4 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = +2 Query: 17 DADDHGSGDGQADGREDHRGDAEARGGPHRRRLRDPQ 127 + D+ G DG+ D ED AE G R+R D + Sbjct: 206 EEDEEGYNDGEVDDEEDEEDAAEEEGSQKRKREPDDE 242
>PMP20_CHLPN (Q9Z812) Probable outer membrane protein pmp20 precursor| (Polymorphic membrane protein 20) Length = 1723 Score = 29.6 bits (65), Expect = 5.7 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = +3 Query: 258 EAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSE 359 +A + TAPV++SS++ + A P A APV +++ Sbjct: 534 KAASNTAPVVSSSTTAASPAVPAAAAAPVTNAAK 567
>CS021_HUMAN (Q8IVT2) Protein C19orf21| Length = 679 Score = 29.6 bits (65), Expect = 5.7 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = +3 Query: 222 GAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEP 362 GAFGKP + AEA A T+P T S E+ ++ S P Sbjct: 442 GAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPP 488
>TERM_ADEB3 (O55439) DNA terminal protein (Bellett protein) (pTP protein)| Length = 663 Score = 29.6 bits (65), Expect = 5.7 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +3 Query: 324 IAMTAPVITSSEPEPVAMTVPVLTAEGREEQTGKVTMQFLLPSKYAKAVEA 476 +A AP S PEPV + +P L E EE+ + L P +A+ V A Sbjct: 377 VARPAPPSPSPSPEPVELEMPPLEGEEEEEE------EELPPRSFAEEVRA 421
>PHC1_HUMAN (P78364) Polyhomeotic-like protein 1 (hPH1) (Early development| regulatory protein 1) Length = 1004 Score = 29.6 bits (65), Expect = 5.7 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 11/108 (10%) Frame = +3 Query: 231 GKPQNTKPAEAIAMT-APVITSS---SSGSGEAEPIAMTAP-------VITSSEPEPVAM 377 G Q P A MT APV ++ G+ + P+ P V +P+ +A+ Sbjct: 580 GALQECPPTLAPGMTLAPVQGTAHVVKGGATTSSPVVAQVPAAFYMQSVHLPGKPQTLAV 639 Query: 378 TVPVLTAEGREEQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPE 521 A+ EE+ T+ +LP+K + E+P+ DE+ L E E Sbjct: 640 K---RKADSEEERDDVSTLGSMLPAKASPVAESPKVMDEKSSLGEKAE 684
>TULP4_MOUSE (Q9JIL5) Tubby-like protein 4 (Tubby superfamily protein)| Length = 1547 Score = 29.6 bits (65), Expect = 5.7 Identities = 21/80 (26%), Positives = 34/80 (42%) Frame = +3 Query: 222 GAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAE 401 GA G P+N P AP I SS+ + I + ++ + + +T TA Sbjct: 674 GASGVPENNPPCTVNIPIAP-IHSSAQALSPTQSIGLVQSLLANQNVQLDVLTNQT-TAV 731 Query: 402 GREEQTGKVTMQFLLPSKYA 461 G E G Q+ + S+Y+ Sbjct: 732 GSAEHAGDAATQYPVSSRYS 751
>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2| Length = 997 Score = 29.6 bits (65), Expect = 5.7 Identities = 17/59 (28%), Positives = 25/59 (42%) Frame = +3 Query: 234 KPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGRE 410 +PQ +PA+A A P + + + EP AP +EP A V V E + Sbjct: 162 EPQPEQPAQAEAQPEPTPAAQAEPEPQPEPQPEAAPAQAVAEPVEPAKNVSVTETEAEQ 220
>IF2_BORPA (Q7W9A5) Translation initiation factor IF-2| Length = 969 Score = 29.6 bits (65), Expect = 5.7 Identities = 17/59 (28%), Positives = 25/59 (42%) Frame = +3 Query: 234 KPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGRE 410 +PQ +PA+A A P + + + EP AP +EP A V V E + Sbjct: 134 EPQPEQPAQAEAQPEPTPAAQAEPEPQPEPQPEAAPAQAVAEPVEPAKNVSVTETEAEQ 192 Score = 28.9 bits (63), Expect = 9.7 Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 8/105 (7%) Frame = +3 Query: 252 PAEAIAMTAPV-------ITSSSSGSGEAEPIAMTAPVITSSEPEPVAM-TVPVLTAEGR 407 PA+A+A PV +T + + EP+ +TS P PVA + P + + Sbjct: 169 PAQAVA--EPVEPAKNVSVTETEAEQARPEPVVHAQTELTSQTPAPVAQPSAPAESPKSA 226 Query: 408 EEQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPERKYAVVR 542 + + P + +A P R R E + A +R Sbjct: 227 KAEPAAAPKTTAKPGEIRRAAAPAAPDRAREEARRAAEAEAAALR 271
>ASX_DROME (Q9V727) Polycomb protein Asx (Additional sex combs)| Length = 1669 Score = 29.6 bits (65), Expect = 5.7 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%) Frame = -3 Query: 403 PSAVRTGTVMATGSGSEEVITGAVMAIGSASP----LPEEEEVMTGAVMAIASAGLVFCG 236 P + TV AT + TG++ A +A+P L +EE +++GAV AG + G Sbjct: 1297 PVTLNVSTVAATPMSNITTATGSMAAAVAAAPPQNVLKQEELLVSGAV----GAGALPAG 1352 Query: 235 LPKAPM*LAR 206 LP M + R Sbjct: 1353 LPPNVMGVGR 1362
>PI5PA_HUMAN (Q15735) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC| 3.1.3.56) Length = 1006 Score = 29.3 bits (64), Expect = 7.5 Identities = 32/104 (30%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Frame = -3 Query: 430 VTLPVCSSRPSAVRTGTVMATGSGSEEVITGAVMAIGSASPLPEEEEVMTGAVMAIASAG 251 + P+C+ P +T T + S + + VM SAS P+ TG+V+A S G Sbjct: 85 ILAPLCT--PEGQKTATAHRSSSLAPTSVGQLVM---SASAGPKPPPATTGSVLAPTSLG 139 Query: 250 LVF---CGLPKAPM*LARTWNPPSR----SPFISLGS*VTSAAT 140 LV G P+ L P SR P S+G T AA+ Sbjct: 140 LVMPASAGPRSPPVTLGPNLAPTSRDQKQEPPASVGPKPTLAAS 183
>PANK1_HUMAN (Q8TE04) Pantothenate kinase 1 (EC 2.7.1.33) (Pantothenic acid| kinase 1) (hPanK1) (hPanK) Length = 598 Score = 29.3 bits (64), Expect = 7.5 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 Query: 44 GQADGREDHRGDAEARGGPHRRRLRDPQVPAVR 142 G A G + E+ GG RR+R PQ PA+R Sbjct: 68 GPARGGQGAEEVGESAGGGEERRVRHPQAPALR 100
>MCL1_CANFA (Q8HYS5) Induced myeloid leukemia cell differentiation protein| Mcl-1 homolog Length = 350 Score = 29.3 bits (64), Expect = 7.5 Identities = 22/97 (22%), Positives = 40/97 (41%) Frame = +3 Query: 132 PPCVAAEVTYDPKEMKGDRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSG 311 PPC A+ P+EM+G + + +P+ A+ ++ +SSG G Sbjct: 101 PPCRASP----PEEMEGPAADAIMSPEEELDGY-EPEPLGKRPAVLPLLELVGEASSGPG 155 Query: 312 EAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQTG 422 + T P E E ++ +++ RE+ TG Sbjct: 156 MDGSLPSTPPPAEEEEDELYRQSLEIISRYLREQATG 192
>YHT1_YEAST (P38835) PH domain protein YHR131C| Length = 850 Score = 29.3 bits (64), Expect = 7.5 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = +2 Query: 11 TNDADDHGSGDGQADGREDHRGD 79 T DA+DHG DG D ED D Sbjct: 794 TKDAEDHGEDDGDGDDGEDDDDD 816
>TNNI3_CAEEL (Q9XUN9) Troponin I 3 (TnI 3)| Length = 260 Score = 29.3 bits (64), Expect = 7.5 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +3 Query: 312 EAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQ 416 EA P+ + APV +EPEP A E EE+ Sbjct: 219 EAAPVELAAPVEPEAEPEPEAAEPAAEEPEAEEEE 253
>RL15_BUCAK (P46185) 50S ribosomal protein L15| Length = 144 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +2 Query: 32 GSGDGQADGREDHRGDAEARGGPHRRRLRDPQVPAVRR 145 GSG G+ GR H+G GG RR Q+P RR Sbjct: 24 GSGLGKTGGR-GHKGQKSRSGGGVRRGFEGGQIPLYRR 60
>IF2_DEIRA (Q9RTG5) Translation initiation factor IF-2| Length = 597 Score = 29.3 bits (64), Expect = 7.5 Identities = 18/82 (21%), Positives = 36/82 (43%) Frame = +3 Query: 168 KEMKGDRDGGFQVLANYIGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVI 347 K++ D ++L ++ +T E + + ++ ++ G+A P A +AP Sbjct: 11 KDLGVDNHKMLEILDGLGVSYKSVSSTIDEENVEIIKQILADEAAEGGDAAPAAASAPAA 70 Query: 348 TSSEPEPVAMTVPVLTAEGREE 413 ++EPE T P A+ E Sbjct: 71 ATAEPEEADET-PAAAAQADAE 91
>PHF2_HUMAN (O75151) PHD finger protein 2 (GRC5)| Length = 1101 Score = 28.9 bits (63), Expect = 9.7 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 11/94 (11%) Frame = +3 Query: 237 PQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSE-----------PEPVAMTV 383 P++ KP++ I A I S + S P T V +S E P P+ T Sbjct: 423 PEHFKPSQLIKDLAKEIRLSENASKAVRPEVNT--VASSDEVCDGDREKEEPPSPIEATP 480 Query: 384 PVLTAEGREEQTGKVTMQFLLPSKYAKAVEAPRP 485 P E ++ T++ PSK K + P+P Sbjct: 481 PQSLLEKVSKKKTPKTVKMPKPSKIPKPPKPPKP 514
>H1_MAIZE (P23444) Histone H1| Length = 245 Score = 28.9 bits (63), Expect = 9.7 Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 8/109 (7%) Frame = +3 Query: 225 AFGKPQNTKPAEAIAMTAP--------VITSSSSGSGEAEPIAMTAPVITSSEPEPVAMT 380 A KP+ PA+A T P V+ + +A+P A P ++P+P+A Sbjct: 142 AAAKPKAKTPAKAKPATKPKPAAKPKAVVKPKTPAKPKAKPAAKAKPKTAGAKPKPLAKK 201 Query: 381 VPVLTAEGREEQTGKVTMQFLLPSKYAKAVEAPRPTDERVVLREVPERK 527 A + + K T P K A A +A +R+ P RK Sbjct: 202 AGRAKA---AKTSAKDT-----PGKKAPAKKAAPSKKAATPVRKAPSRK 242
>GP10_DICDI (Q06885) Glycoprotein gp100 precursor (P29F8)| Length = 544 Score = 28.9 bits (63), Expect = 9.7 Identities = 22/84 (26%), Positives = 35/84 (41%) Frame = +3 Query: 237 PQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREEQ 416 P T P ++ T P T+S + + P + P TS+ P P + T+P T + Sbjct: 136 PSQTIPP-TVSPTVPPQTTSPTSKPTSTPTPTSTPTPTST-PTPTSQTIPPPTTTPK--- 190 Query: 417 TGKVTMQFLLPSKYAKAVEAPRPT 488 P+K +K + P PT Sbjct: 191 ----------PTKSSKPTKTPVPT 204
>YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 precursor| Length = 1317 Score = 28.9 bits (63), Expect = 9.7 Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 1/73 (1%) Frame = +3 Query: 219 IGAFGKPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVA-MTVPVLT 395 + + K + ++ + + T P ++S+S S + P+A T+ T+S+ P + TVP + Sbjct: 340 VSSVQKTRTSEDKPSSSTTVPT-SASTSESSTSSPMAETSSSSTTSQSSPASTSTVPESS 398 Query: 396 AEGREEQTGKVTM 434 G TG T+ Sbjct: 399 TVGSTPTTGLTTL 411
>TUD_DROME (P25823) Maternal protein tudor| Length = 2515 Score = 28.9 bits (63), Expect = 9.7 Identities = 23/91 (25%), Positives = 34/91 (37%) Frame = +3 Query: 234 KPQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGREE 413 +P+ +KPAE AP +P+A+ P +EP PV + Sbjct: 1545 EPKKSKPAEPARTVAP------------QPVALKTPSPVPAEPAPVPKPATPVPEVVEVP 1592 Query: 414 QTGKVTMQFLLPSKYAKAVEAPRPTDERVVL 506 + + SK A A E P + VVL Sbjct: 1593 EINPTVREAAAESKQAPAQEDPYKDLDCVVL 1623
>GAG_SFV3L (P27400) Gag polyprotein (Core polyprotein)| Length = 643 Score = 28.9 bits (63), Expect = 9.7 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 2/89 (2%) Frame = +3 Query: 237 PQNTKPAEAIAMTAPVITSSSSGSGEAEPIAMTAP--VITSSEPEPVAMTVPVLTAEGRE 410 P+ P + P + SS GSG + P+ +AP V+ S P ++ P++ + Sbjct: 220 PRQIDPRLSRVAYNPFLPGSSDGSGGSIPVQPSAPPAVLPSLPSLPAPVSQPIIQYVAQP 279 Query: 411 EQTGKVTMQFLLPSKYAKAVEAPRPTDER 497 V +P ++ +AV PT+ R Sbjct: 280 ----PVPAPQAIPIQHIRAVTGNTPTNPR 304
>SODC_MYCPA (Q9AGW2) Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)| Length = 227 Score = 28.9 bits (63), Expect = 9.7 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = +3 Query: 204 VLANYIGAFGKPQNTKPAEAIAMTAPVITSSS---SGSGEAEPIAMTAPVITSSEPEP 368 VLA + A G + + A ++ T P + + S SG+G AE AP IT+ P Sbjct: 9 VLAGCVVALGACSSPQHASSLPGTTPAVWTGSPSPSGAGAAEAAPAAAPSITTHLKAP 66
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 28.9 bits (63), Expect = 9.7 Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 10/97 (10%) Frame = +3 Query: 252 PAEAIAMTAPVITSSSSGSGEAEPIAMTAPVITSSEPEPVAMTVPVLTAEGR-EEQTGKV 428 PAE + P T EAE + E + T P++T + + EE GK Sbjct: 1091 PAEPSSQKTPTGTQVKGKKKEAEGKTEAEKPVPEKETASIEKTPPMVTTDQKLEESEGKK 1150 Query: 429 TMQFLL----PSKYAKAVEAPR-----PTDERVVLRE 512 + L PS+ KA+ A + P +E+ L E Sbjct: 1151 SKVSALPEKKPSEEEKAISADKKERKPPAEEKPPLEE 1187 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,648,356 Number of Sequences: 219361 Number of extensions: 875426 Number of successful extensions: 4810 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 4452 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4797 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
