| Clone Name | baal18d16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MATK_LOACH (Q8MD24) Maturase K (Intron maturase) | 31 | 2.2 | 2 | MATK_OCIBA (Q85XY6) Maturase K (Intron maturase) | 30 | 5.0 |
|---|
>MATK_LOACH (Q8MD24) Maturase K (Intron maturase)| Length = 508 Score = 30.8 bits (68), Expect = 2.2 Identities = 17/35 (48%), Positives = 20/35 (57%) Frame = -2 Query: 430 FFLYHSHFLSYKSLITLTLSYSYHECISYVLRSTS 326 FFLY+SH Y+S+ LS S H LRSTS Sbjct: 208 FFLYNSHVCEYESIFIFILSQSSH------LRSTS 236
>MATK_OCIBA (Q85XY6) Maturase K (Intron maturase)| Length = 506 Score = 29.6 bits (65), Expect = 5.0 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = -2 Query: 430 FFLYHSHFLSYKSLITLTLSYSYHECISYVLRSTS 326 FFLY+SH Y+S+ + S+H LRSTS Sbjct: 207 FFLYNSHVCEYESIFVFLRNQSFH------LRSTS 235 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,688,496 Number of Sequences: 219361 Number of extensions: 970983 Number of successful extensions: 2000 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1956 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2000 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)