| Clone Name | baal17o13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472878.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1167 Score = 470 bits (237), Expect = e-129 Identities = 417/477 (87%) Strand = Plus / Plus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatggcacata 82 |||||||||||| || ||||||||| ||||||||||||| |||||||| ||||| | Sbjct: 471 cttcaaggaaaatcgtcatcgatttggatttgctgaatcacggctgacatatggtatgat 530 Query: 83 tgggggaagattcatgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgc 142 ||||||||| ||| ||||||| ||||| ||||||||||||||||| |||||||||||||| Sbjct: 531 tgggggaaggttcgtgaagggagaaaacccatttgttgaggagtcatatcagagggttgc 590 Query: 143 cctggaccagcttcttaggattgcaagaattgaagatgacgacatattgatcatgtcaga 202 ||||||||||||| ||| |||||||| ||| |||||||| ||| | |||||||||||||| Sbjct: 591 cctggaccagcttattaagattgcaaaaatagaagatgatgacctgttgatcatgtcaga 650 Query: 203 tgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgacgacacgcc 262 ||||||||||||||||||||||||||| || ||||| |||||||||||||||||| || Sbjct: 651 tgttgatgaaatcccaagtggccacacaattgatctcctgagatggtgcgacgacattcc 710 Query: 263 taagatagtccatcttcagctcaggaattatctgtactcatttgagttttttctggatga 322 | |||| | ||||||||||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 711 tgagatccttcatcttcagcttaggaattacctctactcatttgaatttttcctggatga 770 Query: 323 caagagttggagggcgtcaattcacaggtacgtatctgggaagacaagatatgcgcattt 382 ||| ||||||||||| || || ||||||||| |||||||||||||||||||| || || Sbjct: 771 caaaagttggagggcatcgatacacaggtacaggtctgggaagacaagatatgcacactt 830 Query: 383 tcggcagacagatgtgcttcttgccgattcagggtggcactgcagtttttgtttccggca 442 ||||||||||||| ||||||||| |||||||||||||||||||||||||| || || | Sbjct: 831 ccggcagacagatgagcttcttgctgattcagggtggcactgcagtttttgctttcgcta 890 Query: 443 catcagtgattttgtcttcaagatgcaagcttatagccatgtggataggatcagatt 499 ||| |||||||||| |||||| ||||||||||| |||||||| ||| |||| ||||| Sbjct: 891 cattagtgattttgccttcaaaatgcaagcttacagccatgtcgatcggattagatt 947
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 470 bits (237), Expect = e-129 Identities = 417/477 (87%) Strand = Plus / Minus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatggcacata 82 |||||||||||| || ||||||||| ||||||||||||| |||||||| ||||| | Sbjct: 34791 cttcaaggaaaatcgtcatcgatttggatttgctgaatcacggctgacatatggtatgat 34732 Query: 83 tgggggaagattcatgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgc 142 ||||||||| ||| ||||||| ||||| ||||||||||||||||| |||||||||||||| Sbjct: 34731 tgggggaaggttcgtgaagggagaaaacccatttgttgaggagtcatatcagagggttgc 34672 Query: 143 cctggaccagcttcttaggattgcaagaattgaagatgacgacatattgatcatgtcaga 202 ||||||||||||| ||| |||||||| ||| |||||||| ||| | |||||||||||||| Sbjct: 34671 cctggaccagcttattaagattgcaaaaatagaagatgatgacctgttgatcatgtcaga 34612 Query: 203 tgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgacgacacgcc 262 ||||||||||||||||||||||||||| || ||||| |||||||||||||||||| || Sbjct: 34611 tgttgatgaaatcccaagtggccacacaattgatctcctgagatggtgcgacgacattcc 34552 Query: 263 taagatagtccatcttcagctcaggaattatctgtactcatttgagttttttctggatga 322 | |||| | ||||||||||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 34551 tgagatccttcatcttcagcttaggaattacctctactcatttgaatttttcctggatga 34492 Query: 323 caagagttggagggcgtcaattcacaggtacgtatctgggaagacaagatatgcgcattt 382 ||| ||||||||||| || || ||||||||| |||||||||||||||||||| || || Sbjct: 34491 caaaagttggagggcatcgatacacaggtacaggtctgggaagacaagatatgcacactt 34432 Query: 383 tcggcagacagatgtgcttcttgccgattcagggtggcactgcagtttttgtttccggca 442 ||||||||||||| ||||||||| |||||||||||||||||||||||||| || || | Sbjct: 34431 ccggcagacagatgagcttcttgctgattcagggtggcactgcagtttttgctttcgcta 34372 Query: 443 catcagtgattttgtcttcaagatgcaagcttatagccatgtggataggatcagatt 499 ||| |||||||||| |||||| ||||||||||| |||||||| ||| |||| ||||| Sbjct: 34371 cattagtgattttgccttcaaaatgcaagcttacagccatgtcgatcggattagatt 34315
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 470 bits (237), Expect = e-129 Identities = 417/477 (87%) Strand = Plus / Minus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatggcacata 82 |||||||||||| || ||||||||| ||||||||||||| |||||||| ||||| | Sbjct: 23869918 cttcaaggaaaatcgtcatcgatttggatttgctgaatcacggctgacatatggtatgat 23869859 Query: 83 tgggggaagattcatgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgc 142 ||||||||| ||| ||||||| ||||| ||||||||||||||||| |||||||||||||| Sbjct: 23869858 tgggggaaggttcgtgaagggagaaaacccatttgttgaggagtcatatcagagggttgc 23869799 Query: 143 cctggaccagcttcttaggattgcaagaattgaagatgacgacatattgatcatgtcaga 202 ||||||||||||| ||| |||||||| ||| |||||||| ||| | |||||||||||||| Sbjct: 23869798 cctggaccagcttattaagattgcaaaaatagaagatgatgacctgttgatcatgtcaga 23869739 Query: 203 tgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgacgacacgcc 262 ||||||||||||||||||||||||||| || ||||| |||||||||||||||||| || Sbjct: 23869738 tgttgatgaaatcccaagtggccacacaattgatctcctgagatggtgcgacgacattcc 23869679 Query: 263 taagatagtccatcttcagctcaggaattatctgtactcatttgagttttttctggatga 322 | |||| | ||||||||||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 23869678 tgagatccttcatcttcagcttaggaattacctctactcatttgaatttttcctggatga 23869619 Query: 323 caagagttggagggcgtcaattcacaggtacgtatctgggaagacaagatatgcgcattt 382 ||| ||||||||||| || || ||||||||| |||||||||||||||||||| || || Sbjct: 23869618 caaaagttggagggcatcgatacacaggtacaggtctgggaagacaagatatgcacactt 23869559 Query: 383 tcggcagacagatgtgcttcttgccgattcagggtggcactgcagtttttgtttccggca 442 ||||||||||||| ||||||||| |||||||||||||||||||||||||| || || | Sbjct: 23869558 ccggcagacagatgagcttcttgctgattcagggtggcactgcagtttttgctttcgcta 23869499 Query: 443 catcagtgattttgtcttcaagatgcaagcttatagccatgtggataggatcagatt 499 ||| |||||||||| |||||| ||||||||||| |||||||| ||| |||| ||||| Sbjct: 23869498 cattagtgattttgccttcaaaatgcaagcttacagccatgtcgatcggattagatt 23869442
>dbj|AK100897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131C16, full insert sequence Length = 1808 Score = 470 bits (237), Expect = e-129 Identities = 417/477 (87%) Strand = Plus / Plus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatggcacata 82 |||||||||||| || ||||||||| ||||||||||||| |||||||| ||||| | Sbjct: 696 cttcaaggaaaatcgtcatcgatttggatttgctgaatcacggctgacatatggtatgat 755 Query: 83 tgggggaagattcatgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgc 142 ||||||||| ||| ||||||| ||||| ||||||||||||||||| |||||||||||||| Sbjct: 756 tgggggaaggttcgtgaagggagaaaacccatttgttgaggagtcatatcagagggttgc 815 Query: 143 cctggaccagcttcttaggattgcaagaattgaagatgacgacatattgatcatgtcaga 202 ||||||||||||| ||| |||||||| ||| |||||||| ||| | |||||||||||||| Sbjct: 816 cctggaccagcttattaagattgcaaaaatagaagatgatgacctgttgatcatgtcaga 875 Query: 203 tgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgacgacacgcc 262 ||||||||||||||||||||||||||| || ||||| |||||||||||||||||| || Sbjct: 876 tgttgatgaaatcccaagtggccacacaattgatctcctgagatggtgcgacgacattcc 935 Query: 263 taagatagtccatcttcagctcaggaattatctgtactcatttgagttttttctggatga 322 | |||| | ||||||||||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 936 tgagatccttcatcttcagcttaggaattacctctactcatttgaatttttcctggatga 995 Query: 323 caagagttggagggcgtcaattcacaggtacgtatctgggaagacaagatatgcgcattt 382 ||| ||||||||||| || || ||||||||| |||||||||||||||||||| || || Sbjct: 996 caaaagttggagggcatcgatacacaggtacaggtctgggaagacaagatatgcacactt 1055 Query: 383 tcggcagacagatgtgcttcttgccgattcagggtggcactgcagtttttgtttccggca 442 ||||||||||||| ||||||||| |||||||||||||||||||||||||| || || | Sbjct: 1056 ccggcagacagatgagcttcttgctgattcagggtggcactgcagtttttgctttcgcta 1115 Query: 443 catcagtgattttgtcttcaagatgcaagcttatagccatgtggataggatcagatt 499 ||| |||||||||| |||||| ||||||||||| |||||||| ||| |||| ||||| Sbjct: 1116 cattagtgattttgccttcaaaatgcaagcttacagccatgtcgatcggattagatt 1172
>dbj|AK067372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106K01, full insert sequence Length = 2486 Score = 470 bits (237), Expect = e-129 Identities = 417/477 (87%) Strand = Plus / Plus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatggcacata 82 |||||||||||| || ||||||||| ||||||||||||| |||||||| ||||| | Sbjct: 726 cttcaaggaaaatcgtcatcgatttggatttgctgaatcacggctgacatatggtatgat 785 Query: 83 tgggggaagattcatgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgc 142 ||||||||| ||| ||||||| ||||| ||||||||||||||||| |||||||||||||| Sbjct: 786 tgggggaaggttcgtgaagggagaaaacccatttgttgaggagtcatatcagagggttgc 845 Query: 143 cctggaccagcttcttaggattgcaagaattgaagatgacgacatattgatcatgtcaga 202 ||||||||||||| ||| |||||||| ||| |||||||| ||| | |||||||||||||| Sbjct: 846 cctggaccagcttattaagattgcaaaaatagaagatgatgacctgttgatcatgtcaga 905 Query: 203 tgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgacgacacgcc 262 ||||||||||||||||||||||||||| || ||||| |||||||||||||||||| || Sbjct: 906 tgttgatgaaatcccaagtggccacacaattgatctcctgagatggtgcgacgacattcc 965 Query: 263 taagatagtccatcttcagctcaggaattatctgtactcatttgagttttttctggatga 322 | |||| | ||||||||||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 966 tgagatccttcatcttcagcttaggaattacctctactcatttgaatttttcctggatga 1025 Query: 323 caagagttggagggcgtcaattcacaggtacgtatctgggaagacaagatatgcgcattt 382 ||| ||||||||||| || || ||||||||| |||||||||||||||||||| || || Sbjct: 1026 caaaagttggagggcatcgatacacaggtacaggtctgggaagacaagatatgcacactt 1085 Query: 383 tcggcagacagatgtgcttcttgccgattcagggtggcactgcagtttttgtttccggca 442 ||||||||||||| ||||||||| |||||||||||||||||||||||||| || || | Sbjct: 1086 ccggcagacagatgagcttcttgctgattcagggtggcactgcagtttttgctttcgcta 1145 Query: 443 catcagtgattttgtcttcaagatgcaagcttatagccatgtggataggatcagatt 499 ||| |||||||||| |||||| ||||||||||| |||||||| ||| |||| ||||| Sbjct: 1146 cattagtgattttgccttcaaaatgcaagcttacagccatgtcgatcggattagatt 1202
>dbj|AK063950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F04, full insert sequence Length = 1962 Score = 470 bits (237), Expect = e-129 Identities = 417/477 (87%) Strand = Plus / Plus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatggcacata 82 |||||||||||| || ||||||||| ||||||||||||| |||||||| ||||| | Sbjct: 760 cttcaaggaaaatcgtcatcgatttggatttgctgaatcacggctgacatatggtatgat 819 Query: 83 tgggggaagattcatgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgc 142 ||||||||| ||| ||||||| ||||| ||||||||||||||||| |||||||||||||| Sbjct: 820 tgggggaaggttcgtgaagggagaaaacccatttgttgaggagtcatatcagagggttgc 879 Query: 143 cctggaccagcttcttaggattgcaagaattgaagatgacgacatattgatcatgtcaga 202 ||||||||||||| ||| |||||||| ||| |||||||| ||| | |||||||||||||| Sbjct: 880 cctggaccagcttattaagattgcaaaaatagaagatgatgacctgttgatcatgtcaga 939 Query: 203 tgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgacgacacgcc 262 ||||||||||||||||||||||||||| || ||||| |||||||||||||||||| || Sbjct: 940 tgttgatgaaatcccaagtggccacacaattgatctcctgagatggtgcgacgacattcc 999 Query: 263 taagatagtccatcttcagctcaggaattatctgtactcatttgagttttttctggatga 322 | |||| | ||||||||||| |||||||| || ||||||||||| ||||| |||||||| Sbjct: 1000 tgagatccttcatcttcagcttaggaattacctctactcatttgaatttttcctggatga 1059 Query: 323 caagagttggagggcgtcaattcacaggtacgtatctgggaagacaagatatgcgcattt 382 ||| ||||||||||| || || ||||||||| |||||||||||||||||||| || || Sbjct: 1060 caaaagttggagggcatcgatacacaggtacaggtctgggaagacaagatatgcacactt 1119 Query: 383 tcggcagacagatgtgcttcttgccgattcagggtggcactgcagtttttgtttccggca 442 ||||||||||||| ||||||||| |||||||||||||||||||||||||| || || | Sbjct: 1120 ccggcagacagatgagcttcttgctgattcagggtggcactgcagtttttgctttcgcta 1179 Query: 443 catcagtgattttgtcttcaagatgcaagcttatagccatgtggataggatcagatt 499 ||| |||||||||| |||||| ||||||||||| |||||||| ||| |||| ||||| Sbjct: 1180 cattagtgattttgccttcaaaatgcaagcttacagccatgtcgatcggattagatt 1236
>ref|XM_466520.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2228 Score = 276 bits (139), Expect = 7e-71 Identities = 337/403 (83%) Strand = Plus / Plus Query: 97 tgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttc 156 ||||||| || || |||||||| |||||||| |||||||||||||| || ||||||||| Sbjct: 1210 tgaagggggagaacccatttgtcgaggagtcatatcagagggttgctcttgaccagctta 1269 Query: 157 ttaggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcc 216 ||| ||||| | || |||||| ||| | ||||||||||| ||||||||||| || | Sbjct: 1270 ttaaaattgccgggatcacagatgatgacctgttgatcatgtctgatgttgatgagattc 1329 Query: 217 caagtggccacaccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatc 276 ||||||| || || ||||| |||||||||||||| || |||| ||| | || |||||| Sbjct: 1330 caagtgggcatacgatcaacctcttgagatggtgtgatgacatacctgaagtactccatc 1389 Query: 277 ttcagctcaggaattatctgtactcatttgagttttttctggatgacaagagttggaggg 336 | ||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 1390 tccagctcaggaactatctgtactcatttgaatttttccttgatgacaaaagttggaggg 1449 Query: 337 cgtcaattcacaggtacgtatctgggaagacaagatatgcgcattttcggcagacagatg 396 | ||||||||||| ||| |||| ||||| || ||||| ||||| ||||| ||||||| Sbjct: 1450 cttcaattcacagataccgggctggaaagacgaggtatgcacatttccggcaaacagatg 1509 Query: 397 tgcttcttgccgattcagggtggcactgcagtttttgtttccggcacatcagtgattttg 456 ||||| || |||||||| ||||||||||| |||||||| || |||| |||||||||| Sbjct: 1510 accttctggctgattcaggatggcactgcagcttttgttttcgctacattagtgattttg 1569 Query: 457 tcttcaagatgcaagcttatagccatgtggataggatcagatt 499 ||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 1570 tcttcaaaatgcaagcttatagccatgttgatcggattagatt 1612 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatgg 76 ||||||||||||||| || || ||| |||||||||||| ||| |||||||||| Sbjct: 1136 cttcaaggaaaaccgtcaacgttttgaatttgctgaatcacggttgacctatgg 1189
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 276 bits (139), Expect = 7e-71 Identities = 337/403 (83%) Strand = Plus / Minus Query: 97 tgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttc 156 ||||||| || || |||||||| |||||||| |||||||||||||| || ||||||||| Sbjct: 23103662 tgaagggggagaacccatttgtcgaggagtcatatcagagggttgctcttgaccagctta 23103603 Query: 157 ttaggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcc 216 ||| ||||| | || |||||| ||| | ||||||||||| ||||||||||| || | Sbjct: 23103602 ttaaaattgccgggatcacagatgatgacctgttgatcatgtctgatgttgatgagattc 23103543 Query: 217 caagtggccacaccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatc 276 ||||||| || || ||||| |||||||||||||| || |||| ||| | || |||||| Sbjct: 23103542 caagtgggcatacgatcaacctcttgagatggtgtgatgacatacctgaagtactccatc 23103483 Query: 277 ttcagctcaggaattatctgtactcatttgagttttttctggatgacaagagttggaggg 336 | ||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 23103482 tccagctcaggaactatctgtactcatttgaatttttccttgatgacaaaagttggaggg 23103423 Query: 337 cgtcaattcacaggtacgtatctgggaagacaagatatgcgcattttcggcagacagatg 396 | ||||||||||| ||| |||| ||||| || ||||| ||||| ||||| ||||||| Sbjct: 23103422 cttcaattcacagataccgggctggaaagacgaggtatgcacatttccggcaaacagatg 23103363 Query: 397 tgcttcttgccgattcagggtggcactgcagtttttgtttccggcacatcagtgattttg 456 ||||| || |||||||| ||||||||||| |||||||| || |||| |||||||||| Sbjct: 23103362 accttctggctgattcaggatggcactgcagcttttgttttcgctacattagtgattttg 23103303 Query: 457 tcttcaagatgcaagcttatagccatgtggataggatcagatt 499 ||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 23103302 tcttcaaaatgcaagcttatagccatgttgatcggattagatt 23103260 Score = 260 bits (131), Expect = 4e-66 Identities = 382/463 (82%), Gaps = 2/463 (0%) Strand = Plus / Minus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatggcac-at 81 ||||||||||||||| || || ||| |||||||||||| ||| |||||||||| | || Sbjct: 23090203 cttcaaggaaaaccgtcaacgctttgaatttgctgaatcacggttgacctatggtatgat 23090144 Query: 82 atgggggaagattcatgaagggcgaaaatccatttgttgaggagtcgtatcagagggttg 141 | || |||||||| ||||||| || || |||||||| |||||||| ||||| ||||||| Sbjct: 23090143 a-ggtggaagatttgtgaagggggagaacccatttgtcgaggagtcatatcaaagggttg 23090085 Query: 142 ccctggaccagcttcttaggattgcaagaattgaagatgacgacatattgatcatgtcag 201 | || ||||||||| | | ||||| |||| |||||| ||| | ||||||||||| | Sbjct: 23090084 ctcttgaccagcttatcaaaattgctggaatcacagatgatgaccttttgatcatgtctg 23090025 Query: 202 atgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgacgacacgc 261 |||||||||| ||||| |||||||| || ||||| |||||||| ||||| || ||||| | Sbjct: 23090024 atgttgatgagatccccagtggccatacaatcaacctcttgaggtggtgtgatgacactc 23089965 Query: 262 ctaagatagtccatcttcagctcaggaattatctgtactcatttgagttttttctggatg 321 || | | | ||||| ||||||||||| ||||| ||||||||| ||||| | || || | Sbjct: 23089964 ctgaagtgcttcatctccagctcaggaactatctttactcatttcagtttctccttgacg 23089905 Query: 322 acaagagttggagggcgtcaattcacaggtacgtatctgggaagacaagatatgcgcatt 381 |||||||||||||||| ||||| ||||| ||| |||| ||||| || |||||||||| Sbjct: 23089904 acaagagttggagggcttcaatacacagataccgggctggaaagacgaggtatgcgcatt 23089845 Query: 382 ttcggcagacagatgtgcttcttgccgattcagggtggcactgcagtttttgtttccggc 441 | ||||| ||||| | ||||| ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 23089844 tccggcaaacagacgaccttctggccgactcagggtggcactgcagcttttgcttccggc 23089785 Query: 442 acatcagtgattttgtcttcaagatgcaagcttatagccatgt 484 |||| | ||||||||||||||| ||||||||||| |||||||| Sbjct: 23089784 acataaatgattttgtcttcaaaatgcaagcttacagccatgt 23089742 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatgg 76 ||||||||||||||| || || ||| |||||||||||| ||| |||||||||| Sbjct: 23103736 cttcaaggaaaaccgtcaacgttttgaatttgctgaatcacggttgacctatgg 23103683
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 276 bits (139), Expect = 7e-71 Identities = 337/403 (83%) Strand = Plus / Minus Query: 97 tgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttc 156 ||||||| || || |||||||| |||||||| |||||||||||||| || ||||||||| Sbjct: 70700 tgaagggggagaacccatttgtcgaggagtcatatcagagggttgctcttgaccagctta 70641 Query: 157 ttaggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcc 216 ||| ||||| | || |||||| ||| | ||||||||||| ||||||||||| || | Sbjct: 70640 ttaaaattgccgggatcacagatgatgacctgttgatcatgtctgatgttgatgagattc 70581 Query: 217 caagtggccacaccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatc 276 ||||||| || || ||||| |||||||||||||| || |||| ||| | || |||||| Sbjct: 70580 caagtgggcatacgatcaacctcttgagatggtgtgatgacatacctgaagtactccatc 70521 Query: 277 ttcagctcaggaattatctgtactcatttgagttttttctggatgacaagagttggaggg 336 | ||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 70520 tccagctcaggaactatctgtactcatttgaatttttccttgatgacaaaagttggaggg 70461 Query: 337 cgtcaattcacaggtacgtatctgggaagacaagatatgcgcattttcggcagacagatg 396 | ||||||||||| ||| |||| ||||| || ||||| ||||| ||||| ||||||| Sbjct: 70460 cttcaattcacagataccgggctggaaagacgaggtatgcacatttccggcaaacagatg 70401 Query: 397 tgcttcttgccgattcagggtggcactgcagtttttgtttccggcacatcagtgattttg 456 ||||| || |||||||| ||||||||||| |||||||| || |||| |||||||||| Sbjct: 70400 accttctggctgattcaggatggcactgcagcttttgttttcgctacattagtgattttg 70341 Query: 457 tcttcaagatgcaagcttatagccatgtggataggatcagatt 499 ||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 70340 tcttcaaaatgcaagcttatagccatgttgatcggattagatt 70298 Score = 260 bits (131), Expect = 4e-66 Identities = 382/463 (82%), Gaps = 2/463 (0%) Strand = Plus / Minus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatggcac-at 81 ||||||||||||||| || || ||| |||||||||||| ||| |||||||||| | || Sbjct: 57241 cttcaaggaaaaccgtcaacgctttgaatttgctgaatcacggttgacctatggtatgat 57182 Query: 82 atgggggaagattcatgaagggcgaaaatccatttgttgaggagtcgtatcagagggttg 141 | || |||||||| ||||||| || || |||||||| |||||||| ||||| ||||||| Sbjct: 57181 a-ggtggaagatttgtgaagggggagaacccatttgtcgaggagtcatatcaaagggttg 57123 Query: 142 ccctggaccagcttcttaggattgcaagaattgaagatgacgacatattgatcatgtcag 201 | || ||||||||| | | ||||| |||| |||||| ||| | ||||||||||| | Sbjct: 57122 ctcttgaccagcttatcaaaattgctggaatcacagatgatgaccttttgatcatgtctg 57063 Query: 202 atgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgacgacacgc 261 |||||||||| ||||| |||||||| || ||||| |||||||| ||||| || ||||| | Sbjct: 57062 atgttgatgagatccccagtggccatacaatcaacctcttgaggtggtgtgatgacactc 57003 Query: 262 ctaagatagtccatcttcagctcaggaattatctgtactcatttgagttttttctggatg 321 || | | | ||||| ||||||||||| ||||| ||||||||| ||||| | || || | Sbjct: 57002 ctgaagtgcttcatctccagctcaggaactatctttactcatttcagtttctccttgacg 56943 Query: 322 acaagagttggagggcgtcaattcacaggtacgtatctgggaagacaagatatgcgcatt 381 |||||||||||||||| ||||| ||||| ||| |||| ||||| || |||||||||| Sbjct: 56942 acaagagttggagggcttcaatacacagataccgggctggaaagacgaggtatgcgcatt 56883 Query: 382 ttcggcagacagatgtgcttcttgccgattcagggtggcactgcagtttttgtttccggc 441 | ||||| ||||| | ||||| ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 56882 tccggcaaacagacgaccttctggccgactcagggtggcactgcagcttttgcttccggc 56823 Query: 442 acatcagtgattttgtcttcaagatgcaagcttatagccatgt 484 |||| | ||||||||||||||| ||||||||||| |||||||| Sbjct: 56822 acataaatgattttgtcttcaaaatgcaagcttacagccatgt 56780 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatgg 76 ||||||||||||||| || || ||| |||||||||||| ||| |||||||||| Sbjct: 70774 cttcaaggaaaaccgtcaacgttttgaatttgctgaatcacggttgacctatgg 70721
>dbj|AK070690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058I02, full insert sequence Length = 2261 Score = 276 bits (139), Expect = 7e-71 Identities = 337/403 (83%) Strand = Plus / Plus Query: 97 tgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttc 156 ||||||| || || |||||||| |||||||| |||||||||||||| || ||||||||| Sbjct: 1242 tgaagggggagaacccatttgtcgaggagtcatatcagagggttgctcttgaccagctta 1301 Query: 157 ttaggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcc 216 ||| ||||| | || |||||| ||| | ||||||||||| ||||||||||| || | Sbjct: 1302 ttaaaattgccgggatcacagatgatgacctgttgatcatgtctgatgttgatgagattc 1361 Query: 217 caagtggccacaccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatc 276 ||||||| || || ||||| |||||||||||||| || |||| ||| | || |||||| Sbjct: 1362 caagtgggcatacgatcaacctcttgagatggtgtgatgacatacctgaagtactccatc 1421 Query: 277 ttcagctcaggaattatctgtactcatttgagttttttctggatgacaagagttggaggg 336 | ||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 1422 tccagctcaggaactatctgtactcatttgaatttttccttgatgacaaaagttggaggg 1481 Query: 337 cgtcaattcacaggtacgtatctgggaagacaagatatgcgcattttcggcagacagatg 396 | ||||||||||| ||| |||| ||||| || ||||| ||||| ||||| ||||||| Sbjct: 1482 cttcaattcacagataccgggctggaaagacgaggtatgcacatttccggcaaacagatg 1541 Query: 397 tgcttcttgccgattcagggtggcactgcagtttttgtttccggcacatcagtgattttg 456 ||||| || |||||||| ||||||||||| |||||||| || |||| |||||||||| Sbjct: 1542 accttctggctgattcaggatggcactgcagcttttgttttcgctacattagtgattttg 1601 Query: 457 tcttcaagatgcaagcttatagccatgtggataggatcagatt 499 ||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 1602 tcttcaaaatgcaagcttatagccatgttgatcggattagatt 1644 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatgg 76 ||||||||||||||| || || ||| |||||||||||| ||| |||||||||| Sbjct: 1168 cttcaaggaaaaccgtcaacgttttgaatttgctgaatcacggttgacctatgg 1221
>dbj|AK065136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A04, full insert sequence Length = 3334 Score = 276 bits (139), Expect = 7e-71 Identities = 337/403 (83%) Strand = Plus / Plus Query: 97 tgaagggcgaaaatccatttgttgaggagtcgtatcagagggttgccctggaccagcttc 156 ||||||| || || |||||||| |||||||| |||||||||||||| || ||||||||| Sbjct: 2171 tgaagggggagaacccatttgtcgaggagtcatatcagagggttgctcttgaccagctta 2230 Query: 157 ttaggattgcaagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcc 216 ||| ||||| | || |||||| ||| | ||||||||||| ||||||||||| || | Sbjct: 2231 ttaaaattgccgggatcacagatgatgacctgttgatcatgtctgatgttgatgagattc 2290 Query: 217 caagtggccacaccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatc 276 ||||||| || || ||||| |||||||||||||| || |||| ||| | || |||||| Sbjct: 2291 caagtgggcatacgatcaacctcttgagatggtgtgatgacatacctgaagtactccatc 2350 Query: 277 ttcagctcaggaattatctgtactcatttgagttttttctggatgacaagagttggaggg 336 | ||||||||||| ||||||||||||||||| ||||| || |||||||| |||||||||| Sbjct: 2351 tccagctcaggaactatctgtactcatttgaatttttccttgatgacaaaagttggaggg 2410 Query: 337 cgtcaattcacaggtacgtatctgggaagacaagatatgcgcattttcggcagacagatg 396 | ||||||||||| ||| |||| ||||| || ||||| ||||| ||||| ||||||| Sbjct: 2411 cttcaattcacagataccgggctggaaagacgaggtatgcacatttccggcaaacagatg 2470 Query: 397 tgcttcttgccgattcagggtggcactgcagtttttgtttccggcacatcagtgattttg 456 ||||| || |||||||| ||||||||||| |||||||| || |||| |||||||||| Sbjct: 2471 accttctggctgattcaggatggcactgcagcttttgttttcgctacattagtgattttg 2530 Query: 457 tcttcaagatgcaagcttatagccatgtggataggatcagatt 499 ||||||| |||||||||||||||||||| ||| |||| ||||| Sbjct: 2531 tcttcaaaatgcaagcttatagccatgttgatcggattagatt 2573 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatgg 76 ||||||||||||||| || || ||| |||||||||||| ||| |||||||||| Sbjct: 2097 cttcaaggaaaaccgtcaacgttttgaatttgctgaatcacggttgacctatgg 2150
>ref|XM_466518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1739 Score = 260 bits (131), Expect = 4e-66 Identities = 382/463 (82%), Gaps = 2/463 (0%) Strand = Plus / Plus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatggcac-at 81 ||||||||||||||| || || ||| |||||||||||| ||| |||||||||| | || Sbjct: 764 cttcaaggaaaaccgtcaacgctttgaatttgctgaatcacggttgacctatggtatgat 823 Query: 82 atgggggaagattcatgaagggcgaaaatccatttgttgaggagtcgtatcagagggttg 141 | || |||||||| ||||||| || || |||||||| |||||||| ||||| ||||||| Sbjct: 824 a-ggtggaagatttgtgaagggggagaacccatttgtcgaggagtcatatcaaagggttg 882 Query: 142 ccctggaccagcttcttaggattgcaagaattgaagatgacgacatattgatcatgtcag 201 | || ||||||||| | | ||||| |||| |||||| ||| | ||||||||||| | Sbjct: 883 ctcttgaccagcttatcaaaattgctggaatcacagatgatgaccttttgatcatgtctg 942 Query: 202 atgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgacgacacgc 261 |||||||||| ||||| |||||||| || ||||| |||||||| ||||| || ||||| | Sbjct: 943 atgttgatgagatccccagtggccatacaatcaacctcttgaggtggtgtgatgacactc 1002 Query: 262 ctaagatagtccatcttcagctcaggaattatctgtactcatttgagttttttctggatg 321 || | | | ||||| ||||||||||| ||||| ||||||||| ||||| | || || | Sbjct: 1003 ctgaagtgcttcatctccagctcaggaactatctttactcatttcagtttctccttgacg 1062 Query: 322 acaagagttggagggcgtcaattcacaggtacgtatctgggaagacaagatatgcgcatt 381 |||||||||||||||| ||||| ||||| ||| |||| ||||| || |||||||||| Sbjct: 1063 acaagagttggagggcttcaatacacagataccgggctggaaagacgaggtatgcgcatt 1122 Query: 382 ttcggcagacagatgtgcttcttgccgattcagggtggcactgcagtttttgtttccggc 441 | ||||| ||||| | ||||| ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 1123 tccggcaaacagacgaccttctggccgactcagggtggcactgcagcttttgcttccggc 1182 Query: 442 acatcagtgattttgtcttcaagatgcaagcttatagccatgt 484 |||| | ||||||||||||||| ||||||||||| |||||||| Sbjct: 1183 acataaatgattttgtcttcaaaatgcaagcttacagccatgt 1225
>dbj|AK060490.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H10, full insert sequence Length = 1738 Score = 244 bits (123), Expect = 2e-61 Identities = 381/463 (82%), Gaps = 3/463 (0%) Strand = Plus / Plus Query: 23 cttcaaggaaaaccgccatcgatttagatttgctgaatcgcggctgacctatggcac-at 81 ||||||||||||||| || || ||| |||||||||||| ||| |||||||||| | || Sbjct: 764 cttcaaggaaaaccgtcaacgctttgaatttgctgaatcacggttgacctatggtatgat 823 Query: 82 atgggggaagattcatgaagggcgaaaatccatttgttgaggagtcgtatcagagggttg 141 | || |||||||| ||||||| | || |||||||| |||||||| ||||| ||||||| Sbjct: 824 a-ggtggaagatttgtgaaggggggaac-ccatttgtcgaggagtcatatcaaagggttg 881 Query: 142 ccctggaccagcttcttaggattgcaagaattgaagatgacgacatattgatcatgtcag 201 | || ||||||||| | | ||||| |||| |||||| ||| | ||||||||||| | Sbjct: 882 ctcttgaccagcttatcaaaattgctggaatcacagatgatgaccttttgatcatgtctg 941 Query: 202 atgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgacgacacgc 261 |||||||||| ||||| |||||||| || ||||| |||||||| ||||| || ||||| | Sbjct: 942 atgttgatgagatccccagtggccatacaatcaacctcttgaggtggtgtgatgacactc 1001 Query: 262 ctaagatagtccatcttcagctcaggaattatctgtactcatttgagttttttctggatg 321 || | | | ||||| ||||||||||| ||||| ||||||||| ||||| | || || | Sbjct: 1002 ctgaagtgcttcatctccagctcaggaactatctttactcatttcagtttctccttgacg 1061 Query: 322 acaagagttggagggcgtcaattcacaggtacgtatctgggaagacaagatatgcgcatt 381 |||||||||||||||| ||||| ||||| ||| |||| ||||| || |||||||||| Sbjct: 1062 acaagagttggagggcttcaatacacagataccgggctggaaagacgaggtatgcgcatt 1121 Query: 382 ttcggcagacagatgtgcttcttgccgattcagggtggcactgcagtttttgtttccggc 441 | ||||| ||||| | ||||| ||||| ||||||||||||||||| ||||| ||||||| Sbjct: 1122 tccggcaaacagacgaccttctggccgactcagggtggcactgcagcttttgcttccggc 1181 Query: 442 acatcagtgattttgtcttcaagatgcaagcttatagccatgt 484 |||| | ||||||||||||||| ||||||||||| |||||||| Sbjct: 1182 acataaatgattttgtcttcaaaatgcaagcttacagccatgt 1224
>ref|NM_111028.2| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase, transferring glycosyl groups AT3G01620 mRNA, complete cds Length = 1493 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 |||||||| ||||| |||||||| |||||| | ||||||| ||| || || ||||||||| Sbjct: 1052 gattcaggttggcattgcagtttctgtttcagacacatcaatgacttcgtgttcaagatg 1111 Query: 468 caagcttatagccat 482 |||||||||||||| Sbjct: 1112 aaagcttatagccat 1126 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Plus Query: 189 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 248 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 833 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 892 Query: 249 tgcgacg 255 || |||| Sbjct: 893 tgtgacg 899
>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete sequence Length = 105543 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 |||||||| ||||| |||||||| |||||| | ||||||| ||| || || ||||||||| Sbjct: 57629 gattcaggttggcattgcagtttctgtttcagacacatcaatgacttcgtgttcaagatg 57570 Query: 468 caagcttatagccat 482 |||||||||||||| Sbjct: 57569 aaagcttatagccat 57555 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Minus Query: 189 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 248 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 57848 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 57789 Query: 249 tgcgacg 255 || |||| Sbjct: 57788 tgtgacg 57782
>gb|BT004421.1| Arabidopsis thaliana clone U20435 unknown protein (At3g01620) mRNA, complete cds Length = 1198 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 |||||||| ||||| |||||||| |||||| | ||||||| ||| || || ||||||||| Sbjct: 856 gattcaggttggcattgcagtttctgtttcagacacatcaatgacttcgtgttcaagatg 915 Query: 468 caagcttatagccat 482 |||||||||||||| Sbjct: 916 aaagcttatagccat 930 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Plus Query: 189 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 248 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 637 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 696 Query: 249 tgcgacg 255 || |||| Sbjct: 697 tgtgacg 703
>gb|BT002978.1| Arabidopsis thaliana clone RAFL15-02-G18 (R20435) unknown protein (At3g01620) mRNA, complete cds Length = 1512 Score = 69.9 bits (35), Expect = 8e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 |||||||| ||||| |||||||| |||||| | ||||||| ||| || || ||||||||| Sbjct: 1052 gattcaggttggcattgcagtttctgtttcagacacatcaatgacttcgtgttcaagatg 1111 Query: 468 caagcttatagccat 482 |||||||||||||| Sbjct: 1112 aaagcttatagccat 1126 Score = 46.1 bits (23), Expect = 0.11 Identities = 56/67 (83%) Strand = Plus / Plus Query: 189 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 248 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 833 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 892 Query: 249 tgcgacg 255 || |||| Sbjct: 893 tgtgacg 899
>ref|NM_121452.3| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase, transferring glycosyl groups AT5G14480 mRNA, complete cds Length = 1787 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 ||||| || ||||| |||||||| |||||| ||||||||||||| ||| | ||||||||| Sbjct: 1063 gattctggttggcattgcagtttctgtttcaggcacatcagtgagtttatattcaagatg 1122 Query: 468 caagc 472 |||| Sbjct: 1123 aaagc 1127
>gb|BT020186.1| Arabidopsis thaliana At5g14480 mRNA, complete cds Length = 1164 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 ||||| || ||||| |||||||| |||||| ||||||||||||| ||| | ||||||||| Sbjct: 853 gattctggttggcattgcagtttctgtttcaggcacatcagtgagtttatattcaagatg 912 Query: 468 caagc 472 |||| Sbjct: 913 aaagc 917
>gb|BT015874.1| Arabidopsis thaliana At5g14480 gene, complete cds Length = 1404 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 ||||| || ||||| |||||||| |||||| ||||||||||||| ||| | ||||||||| Sbjct: 877 gattctggttggcattgcagtttctgtttcaggcacatcagtgagtttatattcaagatg 936 Query: 468 caagc 472 |||| Sbjct: 937 aaagc 941
>emb|AL163817.1|ATF18O22 Arabidopsis thaliana DNA chromosome 5, BAC clone F18O22 (ESSA project) Length = 100269 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 ||||| || ||||| |||||||| |||||| ||||||||||||| ||| | ||||||||| Sbjct: 88132 gattctggttggcattgcagtttctgtttcaggcacatcagtgagtttatattcaagatg 88191 Query: 468 caagc 472 |||| Sbjct: 88192 aaagc 88196
>emb|AL163792.1|ATT15N1 Arabidopsis thaliana DNA chromosome 5, BAC clone T15N1 (ESSA project) Length = 86574 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 ||||| || ||||| |||||||| |||||| ||||||||||||| ||| | ||||||||| Sbjct: 6302 gattctggttggcattgcagtttctgtttcaggcacatcagtgagtttatattcaagatg 6361 Query: 468 caagc 472 |||| Sbjct: 6362 aaagc 6366
>emb|BX830059.1|CNS0A27A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB56ZF04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1649 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 ||||| || ||||| |||||||| |||||| ||||||||||||| ||| | ||||||||| Sbjct: 940 gattctggttggcattgcagtttctgtttcaggcacatcagtgagtttatattcaagatg 999 Query: 468 caagc 472 |||| Sbjct: 1000 aaagc 1004
>emb|BX830288.1|CNS0A1Y3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 607 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 ||||| || ||||| |||||||| |||||| ||||||||||||| ||| | ||||||||| Sbjct: 1 gattctggttggcattgcagtttctgtttcaggcacatcagtgagtttatattcaagatg 60 Query: 468 caagc 472 |||| Sbjct: 61 aaagc 65
>gb|AY111666.1| Zea mays CL56912_1 mRNA sequence Length = 810 Score = 54.0 bits (27), Expect = 5e-04 Identities = 116/146 (79%) Strand = Plus / Plus Query: 358 ctgggaagacaagatatgcgcattttcggcagacagatgtgcttcttgccgattcagggt 417 |||||||||| || ||||| ||||| |||||||| || | || || || |||||||||| Sbjct: 21 ctgggaagacgaggtatgcacatttccggcagacggacgacctcctggctgattcagggt 80 Query: 418 ggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatgcaagcttata 477 ||| |||||| || || ||||| |||| | || || ||||||||||| |||| || | Sbjct: 81 ggcnctgcagcttctgcttccgctacataaacgacttcatcttcaagatgaaagcctaca 140 Query: 478 gccatgtggataggatcagattcaag 503 |||| || || |||||||||||||| Sbjct: 141 gccacgtcgaccggatcagattcaag 166
>emb|AJ629867.2| Cucumis sativus mRNA for putative N-acetylglucosaminyltransferase III (gnT-III gene) Length = 2192 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 189 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 248 ||||| ||||| |||||||| ||||| ||||| | ||||| || ||||||||||||||| Sbjct: 1249 ttgataatgtctgatgttgacgaaattccaagcaggcacacaattaatctcttgagatgg 1308 Query: 249 tg 250 || Sbjct: 1309 tg 1310 Score = 46.1 bits (23), Expect = 0.11 Identities = 62/75 (82%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgtttccggcacatcagtgattttgtcttcaagatg 467 ||||| ||||||||||| || || |||||||| | ||||| || |||||||| |||||| Sbjct: 1468 gattcggggtggcactgtagcttctgtttccgacgtatcagcgactttgtctttaagatg 1527 Query: 468 caagcttatagccat 482 |||| || |||||| Sbjct: 1528 aaagcatacagccat 1542
>emb|AJ891043.1| Populus tremula x Populus alba mRNA for beta 1,4 N-acetylglucosaminyltransferase (poGNT3 gene), clone INRA 717 1B4 Length = 1167 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 195 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgac 254 ||||||||||||||||| || || || | ||||| |||||||||||||| ||||| || Sbjct: 643 atgtcagatgttgatgagataccgagcagacacactatcaatctcttgaggtggtgtgat 702 Query: 255 gacac 259 ||||| Sbjct: 703 gacac 707 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 412 cagggtggcactgcagtttttgtttccg 439 |||||||||||||||| ||||||||||| Sbjct: 860 cagggtggcactgcagcttttgtttccg 887
>ref|NM_101170.2| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase, transferring glycosyl groups AT1G12990 mRNA, complete cds Length = 2030 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 444 atcagtgattttgtcttcaagatgcaagcttatagccat 482 |||||||| ||| | ||||||||| |||||||||||||| Sbjct: 1237 atcagtgagtttatattcaagatgaaagcttatagccat 1275 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 195 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcga 253 ||||| ||||| ||||| || |||||| | |||||||| || || |||||||||||||| Sbjct: 988 atgtctgatgtcgatgagattccaagtagacacaccattaaccttttgagatggtgcga 1046
>emb|BX818732.1|CNS0AAN4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL95ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1776 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 444 atcagtgattttgtcttcaagatgcaagcttatagccat 482 |||||||| ||| | ||||||||| |||||||||||||| Sbjct: 1234 atcagtgagtttatattcaagatgaaagcttatagccat 1272 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 195 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcga 253 ||||| ||||| ||||| || |||||| | |||||||| || || |||||||||||||| Sbjct: 985 atgtctgatgtcgatgagattccaagtagacacaccattaaccttttgagatggtgcga 1043
>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence Length = 99758 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 444 atcagtgattttgtcttcaagatgcaagcttatagccat 482 |||||||| ||| | ||||||||| |||||||||||||| Sbjct: 7967 atcagtgagtttatattcaagatgaaagcttatagccat 8005 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 195 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcga 253 ||||| ||||| ||||| || |||||| | |||||||| || || |||||||||||||| Sbjct: 7718 atgtctgatgtcgatgagattccaagtagacacaccattaaccttttgagatggtgcga 7776
>ref|NM_113670.3| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase, transferring glycosyl groups AT3G27540 mRNA, complete cds Length = 1772 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 248 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 812 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 871 Query: 249 tg 250 || Sbjct: 872 tg 873
>gb|AC098711.2| Mus musculus BAC clone RP23-1M11 from 13, complete sequence Length = 204508 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 185 catattgatcatgtcagatgtt 206 |||||||||||||||||||||| Sbjct: 156646 catattgatcatgtcagatgtt 156667
>gb|BT000311.1| Arabidopsis thaliana unknown protein (At3g27540) mRNA, complete cds Length = 1432 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 248 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 631 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 690 Query: 249 tg 250 || Sbjct: 691 tg 692
>gb|AY099829.1| Arabidopsis thaliana unknown protein (At3g27540) mRNA, complete cds Length = 1717 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 248 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 757 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 816 Query: 249 tg 250 || Sbjct: 817 tg 818
>emb|BX824115.1|CNS0A5JW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZD10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1682 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 248 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 811 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 870 Query: 249 tg 250 || Sbjct: 871 tg 872
>dbj|AB025626.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MMJ24 Length = 54452 Score = 44.1 bits (22), Expect = 0.44 Identities = 52/62 (83%) Strand = Plus / Plus Query: 189 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 248 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 35659 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 35718 Query: 249 tg 250 || Sbjct: 35719 tg 35720
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 423 tgcagtttttgtttccggcaca 444 |||||||||||||||||||||| Sbjct: 1700958 tgcagtttttgtttccggcaca 1700979
>ref|NM_105458.2| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase, transferring glycosyl groups AT1G67880 mRNA, complete cds Length = 1615 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgttt 436 |||||||||||||| |||||||| ||||| Sbjct: 1144 gattcagggtggcattgcagtttctgttt 1172
>emb|AL354937.12| Human DNA sequence from clone RP11-50K12 on chromosome 9 Contains a novel pseuodgene, complete sequence Length = 164276 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 462 aagatgcaagcttatagccat 482 ||||||||||||||||||||| Sbjct: 3041 aagatgcaagcttatagccat 3061
>gb|AY080715.1| Arabidopsis thaliana unknown protein (At1g67880) mRNA, complete cds Length = 1632 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgttt 436 |||||||||||||| |||||||| ||||| Sbjct: 1144 gattcagggtggcattgcagtttctgttt 1172
>gb|AC093555.2| Homo sapiens chromosome 3 clone RP11-30A19, complete sequence Length = 163790 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 gtcagatgttgatgaaatccc 217 ||||||||||||||||||||| Sbjct: 88260 gtcagatgttgatgaaatccc 88280
>gb|AC012563.7|AC012563 Arabidopsis thaliana chromosome 1 BAC T23K23 genomic sequence, complete sequence Length = 101966 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 408 gattcagggtggcactgcagtttttgttt 436 |||||||||||||| |||||||| ||||| Sbjct: 89998 gattcagggtggcattgcagtttctgttt 90026
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 tgataaagccctcttcttca 27 |||||||||||||||||||| Sbjct: 1936998 tgataaagccctcttcttca 1937017
>gb|U58991.1|SIU58991 Simian immunodeficiency virus - agm.tan-1, complete genome Length = 9784 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 catgtggataggatcagatt 499 |||||||||||||||||||| Sbjct: 3309 catgtggataggatcagatt 3328
>gb|AY687989.1| Cortaderia jubata tRNA-Ser (trnS), ribosomal protein S4, and tRNA-Thr (trnT) genes, complete sequence; chloroplast Length = 1241 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 cagatgttgatgaaatccca 218 |||||||||||||||||||| Sbjct: 1059 cagatgttgatgaaatccca 1040
>gb|AY687988.1| Cortaderia selloana tRNA-Ser (trnS), ribosomal protein S4, tRNA-Thr (trnT) genes, complete sequence; chloroplast Length = 1241 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 cagatgttgatgaaatccca 218 |||||||||||||||||||| Sbjct: 1059 cagatgttgatgaaatccca 1040
>gb|AC004855.1| Homo sapiens PAC clone RP4-673O11 from 7, complete sequence Length = 74816 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tactcatttgagttttttct 316 |||||||||||||||||||| Sbjct: 54123 tactcatttgagttttttct 54142
>gb|AC123936.4| Mus musculus BAC clone RP23-408L3 from chromosome 15, complete sequence Length = 221204 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 tggcactgcagtttttgttt 436 |||||||||||||||||||| Sbjct: 118867 tggcactgcagtttttgttt 118848
>gb|AC142331.1| Pan troglodytes BAC clone RP43-28J15 from 7, complete sequence Length = 140363 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tactcatttgagttttttct 316 |||||||||||||||||||| Sbjct: 127560 tactcatttgagttttttct 127541
>gb|AC145774.1| Pan troglodytes BAC clone RP43-160F1 from 7, complete sequence Length = 208178 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 tactcatttgagttttttct 316 |||||||||||||||||||| Sbjct: 130409 tactcatttgagttttttct 130390
>ref|XM_775479.1| PREDICTED: Strongylocentrotus purpuratus similar to fetal Alzheimer antigen isoform 2 (LOC575060), mRNA Length = 10259 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 atcatgtcagatgttgatgaaatc 215 ||||||||||||| |||||||||| Sbjct: 9072 atcatgtcagatggtgatgaaatc 9095
>gb|AC147976.3| Pan troglodytes BAC clone CH251-543E22 from chromosome 7, complete sequence Length = 231294 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 tactcatttgagttttttct 316 |||||||||||||||||||| Sbjct: 62484 tactcatttgagttttttct 62503
>gb|AC140939.1| Gallus gallus BAC clone TAM32-30G17 from chromosome ul, complete sequence Length = 86189 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 ttatagccatgtggatagga 492 |||||||||||||||||||| Sbjct: 61946 ttatagccatgtggatagga 61965 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,508,540 Number of Sequences: 3902068 Number of extensions: 4508540 Number of successful extensions: 80101 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79898 Number of HSP's gapped (non-prelim): 173 length of query: 503 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 481 effective length of database: 17,147,199,772 effective search space: 8247803090332 effective search space used: 8247803090332 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)