ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal18c23 |
|---|---|
| Clone Library Name | barley_pub |
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 345 bits (884), Expect = 8e-95 Identities = 173/211 (81%), Positives = 187/211 (88%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 ME TGVTF+DVAGVDEAK++F EVV FLKKPERFTAVGA+IPKGVLLVGPPGTGKTLLA Sbjct: 164 MEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLA 223 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN+PCIVF+DEIDAV Sbjct: 224 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQRGT 283 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 NDEREQTLNQLLTEMDGFEGNTGII++AATNR D+LD+ALLRPGRFDRQV+VDVP Sbjct: 284 GIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVP 343 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 DV+GR EIL VH NKK D +SLE+IA RT Sbjct: 344 DVKGRLEILNVHARNKKLDLSISLELIAKRT 374
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 338 bits (868), Expect = 6e-93 Identities = 172/211 (81%), Positives = 185/211 (87%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 ME TGV F+DVAGV+EAK++F EVV FLK+PE FTAVGA+IPKGVLLVGPPGTGKTLLA Sbjct: 164 MEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGKTLLA 223 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPCIVF+DEIDAV Sbjct: 224 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQRGT 283 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 NDEREQTLNQLLTEMDGFEGNTG+IV+AATNRADILDSALLRPGRFDRQVSVDVP Sbjct: 284 GVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVP 343 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 D RGR IL+VH NKK ++ VSLE IA RT Sbjct: 344 DFRGRLAILEVHAKNKKMESKVSLETIARRT 374
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 329 bits (844), Expect = 4e-90 Identities = 164/211 (77%), Positives = 181/211 (85%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 M+ TGV FDDVAG+DEAK++ EVV FLK+PERFTAVGA+IPKGVLLVGPPGTGKTLLA Sbjct: 163 MDAKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLA 222 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC++F+DEIDAV Sbjct: 223 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGA 282 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 NDEREQTLNQLLTEMDGFEGNTGII++AATNR D+LDSAL+RPGRFDRQV VD P Sbjct: 283 GIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAP 342 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 D GR EIL+VH NKK +VS++ IA RT Sbjct: 343 DYSGRKEILEVHARNKKLAPEVSIDSIARRT 373
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 323 bits (827), Expect = 3e-88 Identities = 161/211 (76%), Positives = 179/211 (84%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 ME TGV FDDVAG+DEAK++ EVV FLK+PE+FTA+GA+IP+GVLL+GPPGTGKTLLA Sbjct: 202 MEAKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAIGAKIPRGVLLIGPPGTGKTLLA 261 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC+VF+DEIDAV Sbjct: 262 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQRGV 321 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 NDEREQTLNQLLTEMDGFEGN+GIIV+AATNR D+LD ALLRPGRFDRQV+VD P Sbjct: 322 GYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRPGRFDRQVTVDYP 381 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 DV+GR IL +H NKK +V L IA RT Sbjct: 382 DVQGRELILAIHAQNKKLHEEVQLAAIARRT 412
>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)| Length = 603 Score = 313 bits (803), Expect = 2e-85 Identities = 156/211 (73%), Positives = 174/211 (82%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 M TG+ FDDVAG++EAK++ EVV FLK P +F AVGA IPKGVLLVGPPGTGKTLLA Sbjct: 145 MVAKTGIMFDDVAGIEEAKEELAEVVAFLKNPSKFLAVGASIPKGVLLVGPPGTGKTLLA 204 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KAIAGEA VPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPC+VF+DEIDAV Sbjct: 205 KAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQRGA 264 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 NDEREQTLNQLLTEMDGFEGNTG+IV+AATNR D+LD+ALLRPGRFDRQ+ V +P Sbjct: 265 GIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDAALLRPGRFDRQIMVSMP 324 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 DV+ R ILKVH + KK VSLE +A RT Sbjct: 325 DVKSRIAILKVHANQKKLHPQVSLEAVARRT 355
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 310 bits (793), Expect = 3e-84 Identities = 157/211 (74%), Positives = 173/211 (81%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 MEP T VTF DVAG+++AK + EVV+FLK +RFT +GA+IPKGVLLVGPPGTGKTLLA Sbjct: 152 MEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTELGAKIPKGVLLVGPPGTGKTLLA 211 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KA+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF++AK NAPCIVF+DEIDAV Sbjct: 212 KAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGA 271 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 NDEREQTLNQLLTEMDGFEGNTGII+VAATNR D+LDSAL+RPGRFDRQV VD P Sbjct: 272 GLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPDVLDSALMRPGRFDRQVVVDRP 331 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 D GR EIL VH K DV L+ IA RT Sbjct: 332 DYAGRREILNVHARGKTLSQDVDLDKIARRT 362
>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 614 Score = 307 bits (787), Expect = 1e-83 Identities = 155/211 (73%), Positives = 171/211 (81%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 ME TG+ F+DVAG++EAK++ E+V FLK +FT VGA IPKGVLLVGPPGTGKTLLA Sbjct: 162 MEAKTGIVFEDVAGIEEAKEELQEIVAFLKDSRKFTNVGATIPKGVLLVGPPGTGKTLLA 221 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KAIAGEA PFFSISGSEFVEMFVGVGASRVRDLFKKAKE APCIVF+DEIDAV Sbjct: 222 KAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGV 281 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 NDEREQTLNQLLTEMDGF G+TG+IVVAATNR D+LDSALLRPGRFDRQ+ V +P Sbjct: 282 GIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLP 341 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 ++ GR ILKVH KK DV LEVIA RT Sbjct: 342 NINGRLAILKVHSKKKKIHKDVLLEVIARRT 372
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 302 bits (773), Expect = 6e-82 Identities = 149/209 (71%), Positives = 174/209 (83%) Frame = +3 Query: 9 PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 188 P+TGV+F D+AG+DEAK +F E+V FLK+P+++T VGA+IPKG+LLVGPPGTGKTLLAKA Sbjct: 179 PDTGVSFKDIAGIDEAKTEFEEIVSFLKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKA 238 Query: 189 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 368 IA EA VPFFS++GSEFVEMF+G+GA+RVRDLFKKA ENAPCIVF+DEIDAV Sbjct: 239 IANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERGAGV 298 Query: 369 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 NDEREQTLNQLLTEMDGF+ N G+IVV ATNRADILD+ALLRPGRFDRQV+V++PD Sbjct: 299 GGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDR 358 Query: 549 RGRTEILKVHGSNKKFDADVSLEVIAMRT 635 GR ILKVH NK DVSL +A RT Sbjct: 359 LGRVGILKVHARNKPLGEDVSLVQLANRT 387
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 300 bits (769), Expect = 2e-81 Identities = 148/209 (70%), Positives = 170/209 (81%) Frame = +3 Query: 9 PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 188 P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPPGTGKTLLA+A Sbjct: 243 PETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 302 Query: 189 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 368 +AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEIDAV Sbjct: 303 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGM 362 Query: 369 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDRQV+VD PDV Sbjct: 363 GGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 422 Query: 549 RGRTEILKVHGSNKKFDADVSLEVIAMRT 635 GR +ILKVH K DV E +A RT Sbjct: 423 AGRVQILKVHSRGKAIGKDVDYEKVARRT 451
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 299 bits (766), Expect = 4e-81 Identities = 148/203 (72%), Positives = 169/203 (83%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG 206 F DVAG DE KQ+ +EVVEFLK P +F+A+GARIPKGVLLVGPPGTGKTLLA+A+AGEAG Sbjct: 165 FKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIPKGVLLVGPPGTGKTLLARAVAGEAG 224 Query: 207 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDE 386 VPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAPCI+F+DEIDAV +DE Sbjct: 225 VPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDE 284 Query: 387 REQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEI 566 REQTLNQLL EMDGF N GII++AATNRADILD ALLRPGRFDRQ+ V+ PDV GR E+ Sbjct: 285 REQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQIQVNRPDVNGREEV 344 Query: 567 LKVHGSNKKFDADVSLEVIAMRT 635 LKVH NK + DV+L+ IA RT Sbjct: 345 LKVHARNKPLNDDVNLKTIATRT 367
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 298 bits (764), Expect = 7e-81 Identities = 148/209 (70%), Positives = 170/209 (81%) Frame = +3 Query: 9 PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 188 P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPPGTGKTLLA+A Sbjct: 246 PETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 305 Query: 189 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 368 +AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEIDAV Sbjct: 306 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGM 365 Query: 369 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDRQV+VD PDV Sbjct: 366 GGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 425 Query: 549 RGRTEILKVHGSNKKFDADVSLEVIAMRT 635 GR +IL+VH K DV E IA RT Sbjct: 426 AGRIKILQVHSRGKALTKDVDFEKIARRT 454
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 296 bits (759), Expect = 3e-80 Identities = 150/210 (71%), Positives = 168/210 (80%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E V F DVAG DE KQ+ +EVVEFLK P +F +GARIPKGVLLVGPPGTGKTLLAK Sbjct: 153 EEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAK 212 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 A AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAPC++F+DEIDAV Sbjct: 213 ACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAG 272 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 +DEREQTLNQLL EMDGF N GII++AATNRADILD ALLRPGRFDRQ++VD PD Sbjct: 273 LGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPD 332 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 V GR +LKVH NK D V+L+ IAMRT Sbjct: 333 VIGREAVLKVHARNKPLDETVNLKSIAMRT 362
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 296 bits (757), Expect = 4e-80 Identities = 145/209 (69%), Positives = 170/209 (81%) Frame = +3 Query: 9 PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 188 P TGV+F DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPPGTGKTLLA+A Sbjct: 255 PETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 314 Query: 189 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 368 +AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEIDAV Sbjct: 315 VAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGM 374 Query: 369 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDRQV+VD PDV Sbjct: 375 GGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 434 Query: 549 RGRTEILKVHGSNKKFDADVSLEVIAMRT 635 GR +IL+VH K DV + +A RT Sbjct: 435 AGRVKILQVHSRGKALGKDVDFDKVARRT 463
>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) Length = 706 Score = 296 bits (757), Expect = 4e-80 Identities = 146/209 (69%), Positives = 169/209 (80%) Frame = +3 Query: 9 PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 188 P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPPGTGKTLLA+A Sbjct: 246 PETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 305 Query: 189 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 368 +AGEAG PFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEIDAV Sbjct: 306 VAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGL 365 Query: 369 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFDRQV+VD PDV Sbjct: 366 GGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDV 425 Query: 549 RGRTEILKVHGSNKKFDADVSLEVIAMRT 635 GR +IL+VH K DV + IA RT Sbjct: 426 AGRVKILQVHSRGKALAKDVDFDKIARRT 454
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 291 bits (745), Expect = 1e-78 Identities = 144/209 (68%), Positives = 167/209 (79%) Frame = +3 Query: 9 PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 188 P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPPGTGKTLLA+A Sbjct: 223 PETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARA 282 Query: 189 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 368 +AGEAGVPFFS + SEFVE+FVGVGASRVR LF+ AK APCIVF+DEIDAV Sbjct: 283 VAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEIDAVGRQRGAGL 342 Query: 369 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 NDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPG+FDRQV+VD PDV Sbjct: 343 GGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKFDRQVTVDRPDV 402 Query: 549 RGRTEILKVHGSNKKFDADVSLEVIAMRT 635 GR IL+VH K DV + IA RT Sbjct: 403 AGRVRILQVHSRGKALAKDVDFDKIARRT 431
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 285 bits (730), Expect = 6e-77 Identities = 145/205 (70%), Positives = 165/205 (80%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 V F DVAG +E KQ+ +EVVEFLK P+RFT +GARIP GVLL GPPGTGKTLLAKA+AGE Sbjct: 184 VRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGE 243 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 AGVPFFSISGS+FVEMFVGVGASRVR LF+ AK+ AP I+F+DEIDAV N Sbjct: 244 AGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGN 303 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 DEREQTLNQLL EMDGFEGN GIIV+AATNR+D+LD ALLRPGRFDR+V V PDV+GR Sbjct: 304 DEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGRE 363 Query: 561 EILKVHGSNKKFDADVSLEVIAMRT 635 ILKVH NK DV L+++A +T Sbjct: 364 AILKVHAKNKPLAEDVDLKLVAQQT 388
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 285 bits (730), Expect = 6e-77 Identities = 145/205 (70%), Positives = 165/205 (80%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 V F DVAG +E KQ+ +EVVEFLK P+RFT +GARIP GVLL GPPGTGKTLLAKA+AGE Sbjct: 184 VRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGE 243 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 AGVPFFSISGS+FVEMFVGVGASRVR LF+ AK+ AP I+F+DEIDAV N Sbjct: 244 AGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGN 303 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 DEREQTLNQLL EMDGFEGN GIIV+AATNR+D+LD ALLRPGRFDR+V V PDV+GR Sbjct: 304 DEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGRE 363 Query: 561 EILKVHGSNKKFDADVSLEVIAMRT 635 ILKVH NK DV L+++A +T Sbjct: 364 AILKVHAKNKPLAEDVDLKLVAQQT 388
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 277 bits (709), Expect = 2e-74 Identities = 132/205 (64%), Positives = 163/205 (79%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 +TF DVAG+DEAK++ E+V+FL+ P +F +G +IPKG LL+GPPGTGKTLLAKAIAGE Sbjct: 152 ITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGE 211 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 A VPFFSISGS+FVEMFVGVGASRVRD+F++ K NAPCI+F+DEIDAV N Sbjct: 212 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGN 271 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 DEREQTLNQ+L EMDGFE N G++++AATNR D+LD ALLRPGRFDRQ++V PD+ GR Sbjct: 272 DEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGRE 331 Query: 561 EILKVHGSNKKFDADVSLEVIAMRT 635 +ILKVH K+++ V +IA T Sbjct: 332 QILKVHLKKIKYNSTVLARIIARGT 356
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 277 bits (709), Expect = 2e-74 Identities = 132/205 (64%), Positives = 163/205 (79%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 +TF DVAG+DEAK++ E+V+FL+ P +F +G +IPKG LL+GPPGTGKTLLAKAIAGE Sbjct: 152 ITFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGE 211 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 A VPFFSISGS+FVEMFVGVGASRVRD+F++ K NAPCI+F+DEIDAV N Sbjct: 212 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGN 271 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 DEREQTLNQ+L EMDGFE N G++++AATNR D+LD ALLRPGRFDRQ++V PD+ GR Sbjct: 272 DEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGRE 331 Query: 561 EILKVHGSNKKFDADVSLEVIAMRT 635 +ILKVH K+++ V +IA T Sbjct: 332 QILKVHLKKIKYNSTVLARIIARGT 356
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 277 bits (709), Expect = 2e-74 Identities = 139/210 (66%), Positives = 164/210 (78%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPPGTGKTLLAK Sbjct: 144 EDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAK 203 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEIDAV Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAG 263 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDRQV V +PD Sbjct: 264 LGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 323 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 VRGR +ILKVH D+ +IA T Sbjct: 324 VRGREQILKVHMRRVPLATDIDAAIIARGT 353
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 277 bits (709), Expect = 2e-74 Identities = 139/210 (66%), Positives = 164/210 (78%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPPGTGKTLLAK Sbjct: 144 EDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAK 203 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEIDAV Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAG 263 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDRQV V +PD Sbjct: 264 LGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 323 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 VRGR +ILKVH D+ +IA T Sbjct: 324 VRGREQILKVHMRRVPLATDIDAAIIARGT 353
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 277 bits (708), Expect = 2e-74 Identities = 139/210 (66%), Positives = 164/210 (78%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPPGTGKTLLAK Sbjct: 144 EDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAK 203 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEIDAV Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAG 263 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDRQV V +PD Sbjct: 264 LGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 323 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 VRGR +ILKVH D+ +IA T Sbjct: 324 VRGREQILKVHMRRVPLAPDIDAAIIARGT 353
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 277 bits (708), Expect = 2e-74 Identities = 139/210 (66%), Positives = 164/210 (78%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPPGTGKTLLAK Sbjct: 144 EDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAK 203 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEIDAV Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAG 263 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDRQV V +PD Sbjct: 264 LGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 323 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 VRGR +ILKVH D+ +IA T Sbjct: 324 VRGREQILKVHMRRVPLAPDIDAAIIARGT 353
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 277 bits (708), Expect = 2e-74 Identities = 139/210 (66%), Positives = 164/210 (78%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPPGTGKTLLAK Sbjct: 144 EDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAK 203 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEIDAV Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAG 263 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 +DEREQTLNQ+L EMDGFEGN GIIV+AATNR D+LD ALLRPGRFDRQV V +PD Sbjct: 264 LGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 323 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 VRGR +ILKVH D+ +IA T Sbjct: 324 VRGREQILKVHMRRVPLAPDIDAAIIARGT 353
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 274 bits (700), Expect = 2e-73 Identities = 136/210 (64%), Positives = 164/210 (78%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E TF DVAG DEAK++ E+VE+LK+P RF +G +IPKG+L+VGPPGTGKTLLAK Sbjct: 144 EDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAK 203 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ A+++APCI+F+DEIDAV Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAG 263 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 +DEREQTLNQ+L EMDGF+GN G+I++AATNR D+LD ALLRPGRFDRQV V +PD Sbjct: 264 LGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPD 323 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 VRGR +ILKVH DV +IA T Sbjct: 324 VRGRKQILKVHMRKVPLSEDVDPMIIARGT 353
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 273 bits (697), Expect = 4e-73 Identities = 135/210 (64%), Positives = 164/210 (78%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E TF DVAG DEAK++ E+VE+LK+P RF +G +IPKG+L+VGPPGTGKTLLAK Sbjct: 144 EDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAK 203 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ ++++APCI+F+DEIDAV Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAG 263 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 +DEREQTLNQ+L EMDGF+GN GII++AATNR D+LD ALLRPGRFDRQV V +PD Sbjct: 264 LGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPD 323 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 +RGR +ILKVH DV +IA T Sbjct: 324 IRGREQILKVHMRKVPLSKDVDPMIIARGT 353
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 273 bits (697), Expect = 4e-73 Identities = 134/204 (65%), Positives = 161/204 (78%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 TF DVAGVDEA ++ E+ +FL+ P R+ A+GA+IPKGVLL GPPGTGKTLLA+A+AGEA Sbjct: 161 TFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEA 220 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 GVPFF+ISGS+FVEMFVGVGASRVRDLF++AK+N+PCI+FVDEIDAV +D Sbjct: 221 GVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHD 280 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 EREQTLNQLL EMDGF G+I++AATNR DILD ALLRPGRFDRQ+ V PD+ GR Sbjct: 281 EREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRA 340 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 +L+VH K AD L+ +A RT Sbjct: 341 VLRVHSKGKPMAADADLDGLAKRT 364
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 273 bits (697), Expect = 4e-73 Identities = 134/204 (65%), Positives = 161/204 (78%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 TF DVAGVDEA ++ E+ +FL+ P R+ A+GA+IPKGVLL GPPGTGKTLLA+A+AGEA Sbjct: 161 TFADVAGVDEAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEA 220 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 GVPFF+ISGS+FVEMFVGVGASRVRDLF++AK+N+PCI+FVDEIDAV +D Sbjct: 221 GVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHD 280 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 EREQTLNQLL EMDGF G+I++AATNR DILD ALLRPGRFDRQ+ V PD+ GR Sbjct: 281 EREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRA 340 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 +L+VH K AD L+ +A RT Sbjct: 341 VLRVHSKGKPMAADADLDGLAKRT 364
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 272 bits (695), Expect = 7e-73 Identities = 141/210 (67%), Positives = 167/210 (79%), Gaps = 2/210 (0%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAI 191 +T VTFDDVAGV+EAK + EVV+FLK P+R+TA+GA+IPKGVLLVGPPGTGKTLLAKA Sbjct: 168 STKVTFDDVAGVEEAKTELSEVVDFLKFPQRYTALGAKIPKGVLLVGPPGTGKTLLAKAA 227 Query: 192 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXX 368 AGEAGVPFF ISGSEFVE+FVG GA+RVRDLF++AK+ APCIVF+DE+DA+ Sbjct: 228 AGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAIGKSRASGAF 287 Query: 369 XXXNDEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 NDEREQTLNQLLTEMDGF +IV+AATNR + LD ALLRPGRFDRQV VD PD Sbjct: 288 MGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPD 347 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 + GR +IL+++ K D +V L+ IA RT Sbjct: 348 LAGRLKILEIYAKKIKLDKEVELKNIATRT 377
>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 609 Score = 271 bits (694), Expect = 9e-73 Identities = 132/203 (65%), Positives = 164/203 (80%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG 206 F DVAGVDEAK++ MEVV+FLK P+++T +G +IP+GVLLVGPPGTGKTLLA+A+AGEA Sbjct: 140 FADVAGVDEAKEELMEVVDFLKFPKKYTEIGGKIPRGVLLVGPPGTGKTLLARAVAGEAS 199 Query: 207 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDE 386 VPFF ISGS+F+EMFVG+GASRVRDLFK+A+E AP I+F+DE+DA+ NDE Sbjct: 200 VPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAI-GKSRLNAIHSNDE 258 Query: 387 REQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEI 566 REQTLNQLL EMDGF+ TG+I++AATNR D+LD ALLRPGRFDRQV VD PD++GR I Sbjct: 259 REQTLNQLLVEMDGFDNTTGLILLAATNRPDVLDPALLRPGRFDRQVCVDRPDLKGREAI 318 Query: 567 LKVHGSNKKFDADVSLEVIAMRT 635 L++H N K +V L+ +A T Sbjct: 319 LRIHAQNVKLAPEVDLKAVARIT 341
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 269 bits (688), Expect = 5e-72 Identities = 132/205 (64%), Positives = 161/205 (78%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 VTF DVAG DEAK++ E+V+FL+ P +F +G +IPKG+L+VGPPGTGKTLLA+AIAGE Sbjct: 148 VTFADVAGCDEAKEEVGEIVDFLRDPNKFQNLGGKIPKGILMVGPPGTGKTLLARAIAGE 207 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 A VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+NAPC++F+DEIDAV + Sbjct: 208 AKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGH 267 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 DEREQTLNQ+L EMDGF GN G+IV+AATNR D+LD AL RPGRFDRQV V +PDV+GR Sbjct: 268 DEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGRE 327 Query: 561 EILKVHGSNKKFDADVSLEVIAMRT 635 +ILKVH DV +A T Sbjct: 328 QILKVHMRKVSVAQDVDAMTLARGT 352
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 268 bits (686), Expect = 8e-72 Identities = 131/210 (62%), Positives = 164/210 (78%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E +TF DVAG DEAK++ E+VE+LK+P RF +G +IPKG+L+VGPPGTGKTLLAK Sbjct: 144 EDQVKITFSDVAGCDEAKEEVQELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAK 203 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 AIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ +++ APCI+F+DEIDAV Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQRGAG 263 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 +DEREQTLNQ+L EMDGF+GN GII++AATNR D+LD ALLRPGRFDRQ+ V +PD Sbjct: 264 LGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPD 323 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 +RGR +I++VH +V +IA T Sbjct: 324 IRGREKIIQVHMKKVPLGNNVDPMIIARGT 353
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 268 bits (686), Expect = 8e-72 Identities = 137/212 (64%), Positives = 162/212 (76%), Gaps = 1/212 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 +E VTF DVAG++E K++ E++E+LK P +F +G R PKGVLL G PG GKTLLA Sbjct: 146 IEEKPKVTFKDVAGIEEVKEEVKEIIEYLKDPVKFQKLGGRPPKGVLLYGEPGVGKTLLA 205 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KAIAGEA VPF S+SGS+FVEMFVGVGA+RVRDLF+ AK++APCI+F+DEIDAV Sbjct: 206 KAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGA 265 Query: 363 X-XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 +DEREQTLNQLL EMDGF+ + GIIV+AATNR DILD ALLRPGRFDRQ+ + Sbjct: 266 IPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPK 325 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 PDVRGR EILKVH NKK DV LE +A T Sbjct: 326 PDVRGRYEILKVHARNKKLAKDVDLEFVARAT 357
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 267 bits (682), Expect = 2e-71 Identities = 135/206 (65%), Positives = 162/206 (78%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 V F DVAG +E KQ+ +EVV+FLK P+++ +GARIP GVLL GPPGTGKTLLAKA+AGE Sbjct: 190 VRFADVAGSEEEKQELVEVVDFLKNPKKYHDLGARIPAGVLLEGPPGTGKTLLAKAVAGE 249 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 AGVPF+SISGS+FVEMFVGVGASRVRDLF+ AK+ AP I+F+DEIDAV N Sbjct: 250 AGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLGGGN 309 Query: 381 DEREQTLNQLLTEMDGFEGN-TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 DEREQTLNQLL EMDGF+ + +IV+AATNR+D+LD ALLRPGRFDR+V V PDV+GR Sbjct: 310 DEREQTLNQLLVEMDGFQDDGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPDVKGR 369 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 +LKVH NK +DV L +A +T Sbjct: 370 EAVLKVHAKNKPLASDVDLHNVATQT 395
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 266 bits (681), Expect = 3e-71 Identities = 132/204 (64%), Positives = 158/204 (77%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 TF DVAGVDEA ++ E+ +FL+ P R+ +GA+IPKGVLL GPPGTGKTLLA+A+AGEA Sbjct: 161 TFADVAGVDEAVEELYEIKDFLQNPCRYQTLGAKIPKGVLLYGPPGTGKTLLARAVAGEA 220 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 GVPFF+ISGS+FVEMFVGVGASRVRDLF +AK+N+PCI+FVDEIDAV +D Sbjct: 221 GVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGTGLGGGHD 280 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 EREQTLNQLL EMDGF G+I++AATNR DILD ALLRPGRFDRQ+ V PD+ GR Sbjct: 281 EREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRA 340 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 +L+VH K D L+ +A RT Sbjct: 341 VLRVHSKGKPIADDADLDGLAKRT 364
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 257 bits (657), Expect = 2e-68 Identities = 135/212 (63%), Positives = 163/212 (76%), Gaps = 2/212 (0%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 +PN V F+D+AG +EAK++ +E+V+FLK PER+ +GA+IPKGVLLVGPPGTGKTLLAK Sbjct: 164 KPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAK 221 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXX 362 A+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+DEIDA+ Sbjct: 222 AVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAG 281 Query: 363 XXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 NDEREQTLNQLL EMDGF N +IV+AATNR +ILD AL+RPGRFDRQV VD Sbjct: 282 GVVSGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDK 341 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 PD GR EILKVH K DV+L+ +A T Sbjct: 342 PDFNGRVEILKVHIKGVKLANDVNLQEVAKLT 373
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 632 Score = 257 bits (657), Expect = 2e-68 Identities = 135/212 (63%), Positives = 163/212 (76%), Gaps = 2/212 (0%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 +PN V F+D+AG +EAK++ +E+V+FLK PER+ +GA+IPKGVLLVGPPGTGKTLLAK Sbjct: 164 KPN--VRFNDMAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAK 221 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXX 362 A+AGEA VPFFS+ GS F+EMFVG+GASRVRDLF+ AK+ AP I+F+DEIDA+ Sbjct: 222 AVAGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAG 281 Query: 363 XXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 NDEREQTLNQLL EMDGF N +IV+AATNR +ILD AL+RPGRFDRQV VD Sbjct: 282 GMISGNDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALMRPGRFDRQVLVDK 341 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 PD GR EILKVH K DV+L+ +A T Sbjct: 342 PDFNGRVEILKVHIKGVKLANDVNLQEVAKLT 373
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 638 Score = 257 bits (656), Expect = 2e-68 Identities = 134/207 (64%), Positives = 160/207 (77%), Gaps = 2/207 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 V F+D+AG +EAK++ +E+V+FLK P+R+ ++GA+IPKGVLLVGPPGTGKTLLAKA+AGE Sbjct: 173 VRFNDMAGNEEAKEEVVEIVDFLKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAKAVAGE 232 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXXX 377 A VPFFS+ GS F+EMFVG+GASRVRDLF AK+ AP I+F+DEIDA+ Sbjct: 233 ASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAGGMISG 292 Query: 378 NDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 NDEREQTLNQLL EMDGF N +IV+AATNR +ILD ALLRPGRFDRQV VD PD +G Sbjct: 293 NDEREQTLNQLLAEMDGFGSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDKPDFKG 352 Query: 555 RTEILKVHGSNKKFDADVSLEVIAMRT 635 R EILKVH K DV L+ IA T Sbjct: 353 RVEILKVHIKPVKLANDVDLQEIAKLT 379
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 249 bits (635), Expect = 6e-66 Identities = 123/205 (60%), Positives = 158/205 (77%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIESPMH 395 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 QT+NQLL EMDGF+ N G+I++ ATN + LD+AL+RPGRFD QV+V PDV+GRT Sbjct: 396 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455 Query: 561 EILKVHGSNKKFDADVSLEVIAMRT 635 EILK + + KFD V E+IA T Sbjct: 456 EILKWYLNKIKFDKSVDPEIIARGT 480
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 248 bits (634), Expect = 8e-66 Identities = 123/205 (60%), Positives = 158/205 (77%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 336 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGE 395 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 396 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIESPMH 453 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 QT+NQLL EMDGF+ N G+I++ ATN + LD+AL+RPGRFD QV+V PDV+GRT Sbjct: 454 PYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 513 Query: 561 EILKVHGSNKKFDADVSLEVIAMRT 635 EILK + + KFD V E+IA T Sbjct: 514 EILKWYLNKIKFDQSVDPEIIARGT 538
>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 709 Score = 246 bits (627), Expect = 5e-65 Identities = 117/207 (56%), Positives = 152/207 (73%) Frame = +3 Query: 15 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 194 + V FD++AG+ E K + +E+V++LK P ++ +GAR P+GV+L GPPGTGKTLLAKA+A Sbjct: 223 SSVRFDNIAGLQEEKHELLEIVDYLKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKAVA 282 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 374 GEAGVPFF +GS F +M VGVGA RVRDLF KAK+ APCI+F+DEID+V Sbjct: 283 GEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELS 342 Query: 375 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 EQTLNQLL EMDGF TG++V+AATNR D+LD ALLRPGRFDR + +++PD++ Sbjct: 343 SYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKE 402 Query: 555 RTEILKVHGSNKKFDADVSLEVIAMRT 635 R IL+VH NK + +SL +A RT Sbjct: 403 REGILQVHAKNKNLSSKISLLDVAKRT 429
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 245 bits (625), Expect = 9e-65 Identities = 122/205 (59%), Positives = 157/205 (76%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 VTF+ V GV+EAKQ+ EVVEFLK P++FT +G ++PKG+LLVGPPGTGKTLLA+A+AGE Sbjct: 278 VTFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGE 337 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 A VPF+ SGSEF EMFVGVGASR+R+LF++AK NAPC++F+DE+D+V + Sbjct: 338 ADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIEFPMH 395 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 QT+ QLL EMDGF+ N G+I++ ATN + LD+AL+RPGRFD QV+V PDV+GRT Sbjct: 396 PYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRT 455 Query: 561 EILKVHGSNKKFDADVSLEVIAMRT 635 EILK + + KFD V E+IA T Sbjct: 456 EILKWYLNKIKFDKSVDPEIIARGT 480
>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 702 Score = 244 bits (623), Expect = 2e-64 Identities = 117/205 (57%), Positives = 150/205 (73%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 V F ++AG+ E K + +E+V++LK P ++ +GAR P+GV+L GPPGTGKTLLAKA+AGE Sbjct: 228 VKFTNIAGLQEEKHELLEIVDYLKNPLKYAQMGARSPRGVILYGPPGTGKTLLAKAVAGE 287 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 AGVPFF +GS F +M VGVGA RVRDLF KAK+ APCI+F+DEID+V Sbjct: 288 AGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSY 347 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 EQTLNQLL EMDGF TG++V+AATNR D+LD ALLRPGRFDR + +++PD++ R Sbjct: 348 SVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKERE 407 Query: 561 EILKVHGSNKKFDADVSLEVIAMRT 635 ILKVH NK + +SL +A RT Sbjct: 408 GILKVHAENKNLSSKISLLDVAKRT 432
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein| RCA1 (EC 3.4.24.-) (TAT-binding homolog 12) Length = 825 Score = 244 bits (622), Expect = 2e-64 Identities = 121/202 (59%), Positives = 149/202 (73%), Gaps = 1/202 (0%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E + + F DVAG DEAK++ ME V FLK+P R+ +GA+IP+G +L GPPGTGKTLLAK Sbjct: 340 ETDVKIKFKDVAGCDEAKEEIMEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAK 399 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXX 362 A AGEAGVPF+ +SGSEFVEMFVGVGA+RVRDLFK A+ENAP IVF+DEIDA+ Sbjct: 400 ATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKG 459 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 NDERE TLNQ+L EMDGF ++V+A TNR DILD ALLRPGRFDR +++D P Sbjct: 460 NFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKP 519 Query: 543 DVRGRTEILKVHGSNKKFDADV 608 ++ GR I VH + K ++ Sbjct: 520 ELEGRKAIFAVHLHHLKLAGEI 541
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 241 bits (616), Expect = 1e-63 Identities = 118/204 (57%), Positives = 148/204 (72%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 V F DVAG +EAK + ME V FLK P+++ +GA+IPKG +L GPPGTGKTLLAKA AGE Sbjct: 305 VKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 364 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 A VPF ++SGSEF+EMFVGVG +RVRDLF A++NAPCI+F+DEIDAV Sbjct: 365 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQ 424 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E+E TLNQLL EMDGF T ++++A TNR DILD ALLRPGRFDRQ+ + PD++GR Sbjct: 425 SEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRA 484 Query: 561 EILKVHGSNKKFDADVSLEVIAMR 632 I KVH K D+ + + +A + Sbjct: 485 SIFKVHLRPLKLDSTLEKDKLARK 508
>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 725 Score = 241 bits (616), Expect = 1e-63 Identities = 115/207 (55%), Positives = 151/207 (72%) Frame = +3 Query: 15 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 194 T F D+AG E ++ E+V++LK P+++ A GAR PKG+LL GPPGTGKTLLAKA A Sbjct: 207 TDKKFTDIAGNKEPIEEVQELVDYLKNPKKYAAAGARFPKGILLGGPPGTGKTLLAKATA 266 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 374 GEA VPFF IS S FVE++VG+GA RVR++FK+A++ AP I+F+DE+DAV Sbjct: 267 GEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIGG 326 Query: 375 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 NDEREQTLNQ+L EMDG N GI+++ ATNR D+LD ALLRPGRFDR ++V +PD++ Sbjct: 327 GNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKE 386 Query: 555 RTEILKVHGSNKKFDADVSLEVIAMRT 635 R EILK+H K+ ++ + IA RT Sbjct: 387 REEILKLHSKGKRLSKEIKFDKIAKRT 413
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 241 bits (615), Expect = 1e-63 Identities = 118/204 (57%), Positives = 148/204 (72%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 V F DVAG +EAK + ME V FLK P+++ +GA+IPKG +L GPPGTGKTLLAKA AGE Sbjct: 304 VKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGE 363 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 A VPF ++SGSEF+EMFVGVG +RVRDLF A++NAPCI+F+DEIDAV Sbjct: 364 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQ 423 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E+E TLNQLL EMDGF T ++++A TNR DILD ALLRPGRFDRQ+ + PD++GR Sbjct: 424 SEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRA 483 Query: 561 EILKVHGSNKKFDADVSLEVIAMR 632 I KVH K D+ + + +A + Sbjct: 484 SIFKVHLRPLKLDSALEKDKLARK 507
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 239 bits (611), Expect = 4e-63 Identities = 114/210 (54%), Positives = 152/210 (72%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 ++ N V F DVAG +EAK + ME V FLK P+++ +GA+IPKG +L GPPGTGKTLLA Sbjct: 165 LKNNIDVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLA 224 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KA AGEA VPF +++GSEF+EMFVGVG +RVRD+F A+++APCI+F+DEIDA+ Sbjct: 225 KATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGR 284 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 E+E TLNQ+L EMDGF +T ++V+A TNR DILD AL RPGRFDRQ+ + P Sbjct: 285 GHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPP 344 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVIAMR 632 D++GR+ I KVH K D +S + ++ + Sbjct: 345 DIKGRSSIFKVHLRPLKLDGSLSKDALSRK 374
>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein| AFG3 (EC 3.4.24.-) (TAT-binding homolog 10) Length = 761 Score = 238 bits (608), Expect = 9e-63 Identities = 118/193 (61%), Positives = 145/193 (75%), Gaps = 2/193 (1%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E + ++F +VAG DEAKQ+ ME V FLK P ++T +GA+IP+G +L GPPGTGKTLLAK Sbjct: 280 ETDIKISFKNVAGCDEAKQEIMEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAK 339 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV--XXXXX 359 A AGEA VPF S+SGSEFVEMFVGVGASRVRDLF +A+ AP I+F+DEIDA+ Sbjct: 340 ATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKG 399 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 NDERE TLNQLL EMDGF + ++V+A TNR D+LD+AL+RPGRFDR + +D Sbjct: 400 GALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDS 459 Query: 540 PDVRGRTEILKVH 578 PDV GR +I VH Sbjct: 460 PDVNGRQQIYLVH 472
>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)| Length = 662 Score = 223 bits (568), Expect = 4e-58 Identities = 111/208 (53%), Positives = 147/208 (70%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAI 191 NT V+F DV G DE K++ ++VVEFL+ PE+F +GA++PKGVLLVGPPG GKTLLAKA+ Sbjct: 160 NTDVSFSDVQGCDEVKKELVDVVEFLRNPEKFNQIGAKLPKGVLLVGPPGVGKTLLAKAV 219 Query: 192 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 371 +GEA VPF SGS F E+ VG+GASR+R LF AK+N+PC+VF+DEID+V Sbjct: 220 SGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSV--GGNRTFS 277 Query: 372 XXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 551 + QT+NQLL EMDGF+ GIIV+ ATN+A++LD ALLRPGRFD Q+ V P Sbjct: 278 PHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYE 337 Query: 552 GRTEILKVHGSNKKFDADVSLEVIAMRT 635 GR +L ++ K +++ +E +A T Sbjct: 338 GRIALLNLYLKKVKTGSNIDIEKLAHGT 365
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 222 bits (565), Expect = 8e-58 Identities = 112/207 (54%), Positives = 145/207 (70%) Frame = +3 Query: 15 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 194 T V FDDV G DEA+ + E+V+FLK P ++ ++G ++PKGVLL GPPGTGKTLLA+A A Sbjct: 276 TNVKFDDVCGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATA 335 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 374 GEAGV FF +SGSEF E++VGVGA R+RDLF +A+ AP I+F+DE+DA+ Sbjct: 336 GEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQA 395 Query: 375 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 +QTLNQLL E+DGF +GII++ ATN + LD AL RPGRFD+ V+VD+PDVRG Sbjct: 396 Y---AKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRG 452 Query: 555 RTEILKVHGSNKKFDADVSLEVIAMRT 635 R +ILK H +V +IA T Sbjct: 453 RADILKHHMKKITLADNVDPTIIARGT 479
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 216 bits (551), Expect = 3e-56 Identities = 109/188 (57%), Positives = 138/188 (73%), Gaps = 1/188 (0%) Frame = +3 Query: 18 GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 GV+F DVAG+ EAK + E V++LK PERF +GA++PKG LL+GPPG GKTLLAKA+A Sbjct: 305 GVSFKDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVAT 364 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-XXXXXXXXXX 374 EA VPF +++G EFVE+ G+GA+RVR LFK+A+ APCIV++DEIDAV Sbjct: 365 EAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGF 424 Query: 375 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 N E EQTLNQLL EMDG +IV+A+TNRADILD AL+RPGR DR V +D+P ++ Sbjct: 425 SNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQE 484 Query: 555 RTEILKVH 578 R EI + H Sbjct: 485 RREIFEQH 492
>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)| Length = 676 Score = 214 bits (545), Expect = 2e-55 Identities = 111/194 (57%), Positives = 139/194 (71%) Frame = +3 Query: 45 VDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 224 +DEAK + E+V++LK PE+++ +G R+PKGVLLVGPPGTGKTLLA+AIAGEA VPFF Sbjct: 206 MDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHT 265 Query: 225 SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLN 404 +GSEF E+ VG GA RVRDLF KAK APCI+F+DEID+V + QT+N Sbjct: 266 AGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSV--GSKRVSNSIHPYANQTIN 323 Query: 405 QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGS 584 QLL+EMDGF N GIIV+AATNR D LD ALLRPGRFD +V+V PD+ GR +I + S Sbjct: 324 QLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLS 383 Query: 585 NKKFDADVSLEVIA 626 + +V+A Sbjct: 384 KIVHSGGIDPKVLA 397
>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 430 Score = 207 bits (528), Expect = 2e-53 Identities = 106/212 (50%), Positives = 137/212 (64%), Gaps = 1/212 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 ++ V ++D+ G+++ Q+ EVVE LK PE F VG PKG+LL GPPGTGKTLL Sbjct: 161 VDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLL 220 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA+A E F + GSE V+ F+G GAS V+D+FK AKE AP I+F+DEIDA+ Sbjct: 221 AKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRT 280 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 + E ++TL QLL EMDGF+ + ++ ATNR DILD A+LRPGRFDR + V Sbjct: 281 DALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPA 340 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 PD +GR EILK+H DV+LE IA T Sbjct: 341 PDEKGRLEILKIHTRKMNLAEDVNLEEIAKMT 372
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 201 bits (512), Expect = 1e-51 Identities = 102/193 (52%), Positives = 130/193 (67%), Gaps = 1/193 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E ++F+D+ G++ +D EVVE LK PE F VG PKGVLL GPPGTGKTLL Sbjct: 139 IEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLL 198 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA+A E F + GSE V+ F+G GA VRD+FK AKE +PCI+F+DEIDAV Sbjct: 199 AKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRT 258 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 + E ++TL QLL EMDGF+ + ++AATNR DILD A+LRPGRFDR + + + Sbjct: 259 ESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISM 318 Query: 540 PDVRGRTEILKVH 578 PD GR EILK+H Sbjct: 319 PDEDGRLEILKIH 331
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 201 bits (512), Expect = 1e-51 Identities = 105/212 (49%), Positives = 138/212 (65%), Gaps = 1/212 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 ++ + V++DD+ G+DE ++ EVVE LK+PE F VG PKGVLL GPPGTGKTLL Sbjct: 170 VDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLL 229 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA+A A F ++ E V+ F+G GA VR+LF+ A+E AP I+F+DEIDA+ Sbjct: 230 AKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRM 289 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 + E ++TL QLL EMDGF+ I V+AATNR DILD ALLRPGRFDR + + + Sbjct: 290 RDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPL 349 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 PD GR EI K+H + DV L+ +A T Sbjct: 350 PDEEGRYEIFKIHTRDMNLAEDVDLQKLAKIT 381
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 198 bits (504), Expect = 1e-50 Identities = 104/212 (49%), Positives = 136/212 (64%), Gaps = 1/212 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E V+++ + G++E ++ E VE LKKPE F +G PKGVLL GPPGTGKTLL Sbjct: 142 VEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLL 201 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA+A E F I SEFV ++G GA VR +F+ AKE +P I+F+DEIDAV Sbjct: 202 AKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRL 261 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 + E ++TL QLL E+DGFE + +VAATNR DILD ALLRPGRFDR + V + Sbjct: 262 KSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPL 321 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 P+ GR EILK+H S +V +E++A T Sbjct: 322 PNEDGRREILKIHTSGMALAEEVDIELLARIT 353
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 393 Score = 196 bits (498), Expect = 5e-50 Identities = 99/206 (48%), Positives = 136/206 (66%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+ ++ G++E ++ EVVE LK PE F +G PKGVLL GPPGTGKT+LAKA+A Sbjct: 131 VTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVAT 190 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E+ F + SEF + FVG GA VR+LF+ AK AP I+F+DEIDA+ Sbjct: 191 ESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSG 250 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 E ++TL QLL E+DGF+ + ++AATNR DILD ALLRPGRFDR + V +PD +GR Sbjct: 251 EREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGR 310 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 TEI ++ K + +++LE+++ T Sbjct: 311 TEIFNIYLKKMKIEDNINLELLSQLT 336
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 194 bits (493), Expect = 2e-49 Identities = 98/206 (47%), Positives = 135/206 (65%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V ++D+ G++E KQ+ E VE+ LK E F +G R PKGVLL GPPGTGKTLLAKA+A Sbjct: 449 VKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVAN 508 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E+G F S+ G E +VG +R++F+KA+++APCI+F DEIDA+ Sbjct: 509 ESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSA 568 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ +NQLLTE+DG E ++V+AATNR DI+D ALLRPGR DR + V VPD + R Sbjct: 569 --VTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKAR 626 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 +I K+H + DV+LE +A +T Sbjct: 627 LDIFKIHTRSMNLAEDVNLEELAKKT 652 Score = 182 bits (462), Expect = 7e-46 Identities = 93/203 (45%), Positives = 131/203 (64%), Gaps = 1/203 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G+ E + E++E ++ PE F +G PKGVLLVGPPGTGKTLLAKA+A Sbjct: 176 VTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVAN 235 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 EAG F+ I+G E + +VG +R +F++A+ENAP I+F+DEIDA+ Sbjct: 236 EAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAI---APKRDEAT 292 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + + QLLT MDG +G ++V+ ATNR + LD AL RPGRFDR++ + VPD GR Sbjct: 293 GEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGR 352 Query: 558 TEILKVHGSNKKFDADVSLEVIA 626 EIL++H N DV L+ +A Sbjct: 353 KEILQIHTRNMPLAEDVDLDYLA 375
>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 397 Score = 192 bits (488), Expect = 7e-49 Identities = 104/203 (51%), Positives = 129/203 (63%), Gaps = 1/203 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G+++ Q+ E +E LK PE F VG PKGVLL GPPG GKTL+AKA+A Sbjct: 135 VTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVAN 194 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F + GSE V F+G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 195 HVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGG 254 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V +PD +GR Sbjct: 255 EREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGR 314 Query: 558 TEILKVHGSNKKFDADVSLEVIA 626 EILKVH + K V L VIA Sbjct: 315 LEILKVH-TRKMNLKGVDLRVIA 336
>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 191 bits (486), Expect = 1e-48 Identities = 104/203 (51%), Positives = 128/203 (63%), Gaps = 1/203 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKTL+AKA+A Sbjct: 137 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAH 196 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 197 EVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGG 256 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V +PD GR Sbjct: 257 EREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGR 316 Query: 558 TEILKVHGSNKKFDADVSLEVIA 626 EILKVH K +V L VIA Sbjct: 317 LEILKVHTRRMKL-KNVDLRVIA 338
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 191 bits (485), Expect = 2e-48 Identities = 97/212 (45%), Positives = 133/212 (62%), Gaps = 1/212 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E V+++D+ G+D ++ E VE L KPE F VG PKGVLL GPPGTGKTLL Sbjct: 132 VEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLL 191 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA+A + F + GSEFV+ ++G GA VR++F+ AKE AP I+F+DE+DA+ Sbjct: 192 AKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRT 251 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 + E ++T+ QLL E+DGF+ + V+ ATNR DILD A+LRPGRFDR + V + Sbjct: 252 NSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPL 311 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 P GR +I K+H K DV + +A T Sbjct: 312 PTFEGRIQIFKIHTRKMKLAEDVDFKELARIT 343
>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 396 Score = 191 bits (484), Expect = 2e-48 Identities = 105/206 (50%), Positives = 128/206 (62%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKTL+AKAIA Sbjct: 134 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAH 193 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 194 EVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGG 253 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V +PD GR Sbjct: 254 EREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGR 313 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 EILKVH K V L +IA T Sbjct: 314 LEILKVHTRRMKL-RGVDLRLIAELT 338
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 191 bits (484), Expect = 2e-48 Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 1/212 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E V F DV G++E ++ E V +K P F +G PKGVLL GPPGTGKTLL Sbjct: 130 VEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLL 189 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA+AGE F + GSE V F+G GA VR++F+ A+E AP I+F+DEIDA+ Sbjct: 190 AKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRV 249 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 + E ++T+ QLL E+DGF+ + V+AATNR D++D A+LRPGRFDR + V + Sbjct: 250 DIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPL 309 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 P +RGR EIL +H K DV LE IA T Sbjct: 310 PSLRGRLEILGIHTRKAKMAPDVDLEAIAKLT 341
>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 399 Score = 190 bits (483), Expect = 3e-48 Identities = 104/206 (50%), Positives = 127/206 (61%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G+ + Q+ E +E LK PE F VG PKGVLL GPPG GKTL+AKA+A Sbjct: 137 VTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAH 196 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F + GSE V ++G GA V +LF+ AKE AP I+F+DEIDA+ Sbjct: 197 EVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGG 256 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 E +TL QLL EMDGF+ + V+AATNR DILD ALLRPGRFDR + V +PD GR Sbjct: 257 EREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGR 316 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 EILKVH K V L IA T Sbjct: 317 LEILKVHTRRMKLKG-VDLRAIAEMT 341
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 392 Score = 187 bits (476), Expect = 2e-47 Identities = 98/211 (46%), Positives = 134/211 (63%), Gaps = 1/211 (0%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 +PN V + D+ G++E + EV+E LK PE F +G PKGVLL GPPGTGKTLLA Sbjct: 128 KPN--VHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLA 185 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KA+A E+ F + SEF + FVG GA VR++F+ A+ AP IVF+DEIDA+ Sbjct: 186 KAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVD 245 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 E ++TL QLL E+DGF+ + ++AATNR DILD ALLRPGRFDR + V +P Sbjct: 246 MGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLP 305 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 + GR EI +++ K D ++ +++A T Sbjct: 306 NFEGRKEIFRIYLQKMKTDGNIRYDILASMT 336
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 186 bits (472), Expect = 5e-47 Identities = 93/206 (45%), Positives = 135/206 (65%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V+++D+ ++EAKQ E+VE+ ++ PE F +G PKG+LL GPPGTGKTLLA+A+A Sbjct: 209 VSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALAN 268 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G F +++G E + F G R+R++FK+A+ENAP I+F+DEIDA+ Sbjct: 269 EIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAI---APKREDVT 325 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + ++ + QLLT MDG +G +IV+ ATNR D +D AL RPGRFDR++ + PD +GR Sbjct: 326 GEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGR 385 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 +IL+VH N DV L+ +A T Sbjct: 386 KDILQVHTRNMPITDDVDLDKLAEMT 411 Score = 184 bits (467), Expect = 2e-46 Identities = 98/203 (48%), Positives = 128/203 (63%), Gaps = 1/203 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V ++D+ G+D KQ E VE+ L+ PE FT G PKG+LL GPPGTGKT+LAKA+A Sbjct: 484 VNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVAT 543 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E+G F ++ G E + +VG +R++F+KA++ AP ++F DEID++ Sbjct: 544 ESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSG 603 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ER +NQLL EMDG ++++AATNR DILD ALLRPGRFDR + V PD R Sbjct: 604 VTER--IVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTAR 661 Query: 558 TEILKVHGSNKKFDADVSLEVIA 626 EILKVH N DVSLE IA Sbjct: 662 FEILKVHTKNVPLAEDVSLEDIA 684
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 185 bits (469), Expect = 1e-46 Identities = 93/206 (45%), Positives = 134/206 (65%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V ++D+ G++ AKQ+ ME VE+ LK PE F A + P+G+LL GPPGTGKTLLAKA+A Sbjct: 452 VKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVAN 511 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E+ F S+ G E + +VG VR++F+KA++ APC++F DEID++ Sbjct: 512 ESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGDSH 571 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ER ++QLLTE+DG E ++V+AATNR D++D ALLRPGR +R + + PD + R Sbjct: 572 VTER--VVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKAR 629 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 EI K+H K DV++E +A +T Sbjct: 630 VEIFKIHLRGKPLADDVNIEELAEKT 655 Score = 177 bits (450), Expect = 2e-44 Identities = 93/206 (45%), Positives = 126/206 (61%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G+ + E++E LK PE F +G PKGVLL GPPGTGKTL+AKA+A Sbjct: 179 VTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVAN 238 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F ISG E + + G R+R++F++AKENAP I+F+DEID++ Sbjct: 239 EVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSI---APKREEVT 295 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + + QLL MDG E +IV+AATNR D +D AL RPGRFDR++ + VPD GR Sbjct: 296 GEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGR 355 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 EIL++H DV LE +A T Sbjct: 356 KEILEIHTRKMPLAEDVDLEELAELT 381
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 184 bits (468), Expect = 1e-46 Identities = 92/206 (44%), Positives = 128/206 (62%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +D + G+DE Q+ E VE L PERF +G PKGVLL G PGTGKTLLAKA+A Sbjct: 156 VDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAH 215 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F + GSE V+ ++G G+ VR++F+ A++ AP I+F+DE+D++ Sbjct: 216 RTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGA 275 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++TL QLL EMDGF+ I ++AATNR D+LD A+LRPGRFDR V V +P + R Sbjct: 276 DREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEAR 335 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 +ILK+H D+ + +A T Sbjct: 336 GKILKIHCEKMTLAEDIDFKKLAKAT 361
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 184 bits (466), Expect = 2e-46 Identities = 95/205 (46%), Positives = 132/205 (64%), Gaps = 1/205 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 +T+DDV G+ EAK + E VE+ L +PE+FT +G P GVLL GPPGTGKTL+AKA+A Sbjct: 459 ITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVAN 518 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F S+ G + + +VG +R F+KA++ AP ++F DE+D++ Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSL--APGRGQTGG 576 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 N+ E+ +NQLLTE+DG E ++V+AATNR DI+D AL+R GRFDR V V P + GR Sbjct: 577 NNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGR 636 Query: 558 TEILKVHGSNKKFDADVSLEVIAMR 632 +ILK+H + ADVSL +A R Sbjct: 637 EQILKIHTQDTPLAADVSLRELAER 661 Score = 180 bits (457), Expect = 3e-45 Identities = 90/204 (44%), Positives = 130/204 (63%), Gaps = 1/204 (0%) Frame = +3 Query: 18 GVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 194 G+T++D+ G++ Q E+VE +K P+ F +G P+GVLL GPPGTGKTLLAKA+A Sbjct: 185 GITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVA 244 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 374 E FFSI+G E + + G ++R++F+ AK+++P I+F+DE+D++ Sbjct: 245 NETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSI---APKREDV 301 Query: 375 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 + + + QLLT MDG EG +IV+AATNR D +D AL RPGRFDR++ + VPD G Sbjct: 302 TGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIG 361 Query: 555 RTEILKVHGSNKKFDADVSLEVIA 626 R EILK+H DV+L +A Sbjct: 362 REEILKIHTRGMPLSDDVNLSTLA 385
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 184 bits (466), Expect = 2e-46 Identities = 92/206 (44%), Positives = 129/206 (62%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +D + G+DE Q+ E VE L +PERF +G PKGVLL G PGTGKTLLAKA+A Sbjct: 156 VDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAH 215 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F + GSE V+ ++G G+ VR++F+ A++ AP I+F+DE+D++ Sbjct: 216 RTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGA 275 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++TL QLL EMDGF+ I ++AATNR D+LD A+LRPGRFDR V V +P + R Sbjct: 276 DREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEAR 335 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 +ILK+H D+ + +A T Sbjct: 336 GKILKIHCGKMTLAGDIDFKKLAKVT 361
>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 181 bits (460), Expect = 1e-45 Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326 Query: 561 EILKVHGSNKKFDADVSLEVIA 626 +ILK+H ++L IA Sbjct: 327 DILKIHSRKMNLTRGINLRKIA 348
>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding protein homolog 10) (TBP10) Length = 406 Score = 181 bits (460), Expect = 1e-45 Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326 Query: 561 EILKVHGSNKKFDADVSLEVIA 626 +ILK+H ++L IA Sbjct: 327 DILKIHSRKMNLTRGINLRKIA 348
>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1) Length = 406 Score = 181 bits (460), Expect = 1e-45 Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326 Query: 561 EILKVHGSNKKFDADVSLEVIA 626 +ILK+H ++L IA Sbjct: 327 DILKIHSRKMNLTRGINLRKIA 348
>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid hormone receptor-interacting protein 1) (TRIP1) Length = 406 Score = 181 bits (460), Expect = 1e-45 Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326 Query: 561 EILKVHGSNKKFDADVSLEVIA 626 +ILK+H ++L IA Sbjct: 327 DILKIHSRKMNLTRGINLRKIA 348
>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)| (p45/SUG) (Proteasome 26S subunit ATPase 5) Length = 406 Score = 181 bits (460), Expect = 1e-45 Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 147 TYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 206 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 207 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGD 266 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 267 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 326 Query: 561 EILKVHGSNKKFDADVSLEVIA 626 +ILK+H ++L IA Sbjct: 327 DILKIHSRKMNLTRGINLRKIA 348
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 181 bits (459), Expect = 2e-45 Identities = 94/212 (44%), Positives = 131/212 (61%), Gaps = 1/212 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 ++ + VT+ D+ G+D+ ++ E VE L PE+F AVG P GVLL GPPGTGKT+L Sbjct: 143 VDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTML 202 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA+A + F ++GSE V F+G G+ VRDLF+ A++ P I+F+DEIDAV Sbjct: 203 AKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRT 262 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 + E ++T+ QLL+EMDGF+ I ++AATNR D+LDSA+LRPGRFDR + V Sbjct: 263 DSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPN 322 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 P+ R IL++H V +A T Sbjct: 323 PNPDARERILEIHAGEMNVADSVDFSDLAADT 354
>VAT_THEAC (O05209) VCP-like ATPase| Length = 745 Score = 179 bits (455), Expect = 5e-45 Identities = 97/206 (47%), Positives = 126/206 (61%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DD+ G+++ K++ E VE L KP+ F +G R KG LL GPPG GKTLLAKA+A Sbjct: 464 VHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVAT 523 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E+ F SI G E + +VG +R++FKKAK+ AP IVF+DEID++ Sbjct: 524 ESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSG 583 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ER +NQLLT +DG E G++V+ ATNR DI+D ALLR GRFD+ + + PD R Sbjct: 584 VTER--IVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEAR 641 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 ILKVH N DV L IA RT Sbjct: 642 LSILKVHTKNMPLAPDVDLNDIAQRT 667 Score = 168 bits (425), Expect = 1e-41 Identities = 84/196 (42%), Positives = 123/196 (62%), Gaps = 1/196 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E + ++++D+ G+ E E++E LK PE F +G PKGV+L GPPGTGKTL+ Sbjct: 181 LEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLI 240 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A E+G F SI+G E + + G ++R++F KA+E AP I+F+DEID++ Sbjct: 241 ARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSI---AP 297 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 + + + QLLT MDG + +IV+ ATNR D +D AL RPGRFDR++ + V Sbjct: 298 KREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGV 357 Query: 540 PDVRGRTEILKVHGSN 587 PD GR EIL +H N Sbjct: 358 PDRNGRKEILMIHTRN 373
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 179 bits (454), Expect = 6e-45 Identities = 91/209 (43%), Positives = 128/209 (61%), Gaps = 1/209 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E VT+ DV G E + EVVE L PERF +G PKG++L GPPGTGKTL Sbjct: 170 VEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLC 229 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CI+F DEIDA+ Sbjct: 230 ARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARF 289 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++E ++T+ +L+T++DGF+ I V+ ATNR + LD AL+RPGR DR+V + Sbjct: 290 DDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGL 349 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD+ GR IL++H + D D+ E+IA Sbjct: 350 PDLEGRAHILRIHAKSMAIDKDIRWELIA 378
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 179 bits (454), Expect = 6e-45 Identities = 88/193 (45%), Positives = 127/193 (65%), Gaps = 1/193 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 ++ + V ++D+ G+D+ ++ E VE +K P F VG P GVLL GPPGTGKTL+ Sbjct: 140 VDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTLM 199 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA+A + F ++GSE V F+G GA VRDLF+ A+++ P +VF+DEIDA+ Sbjct: 200 AKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRT 259 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 + E ++T+ QLL+EMDGF+ I ++AATNR D+LD A+LRPGRFDR + V Sbjct: 260 DSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPH 319 Query: 540 PDVRGRTEILKVH 578 P+V GR +I ++H Sbjct: 320 PNVGGREKIFRIH 332
>PRS8_DROME (O18413) 26S protease regulatory subunit 8| Length = 405 Score = 179 bits (453), Expect = 8e-45 Identities = 91/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T++ V G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 146 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 205 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SGSE V+ F+G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 206 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGD 265 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGFE I V+ ATNR DILD ALLRPGR DR++ P+ R Sbjct: 266 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL 325 Query: 561 EILKVHGSNKKFDADVSLEVIA 626 +ILK+H ++L IA Sbjct: 326 DILKIHSRKMNLTRGINLRKIA 347
>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)| Length = 402 Score = 179 bits (453), Expect = 8e-45 Identities = 91/202 (45%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T++ V G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 143 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHH 202 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SGSE V+ F+G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 203 TECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGD 262 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGFE I V+ ATNR DILD ALLRPGR DR++ P+ R Sbjct: 263 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARL 322 Query: 561 EILKVHGSNKKFDADVSLEVIA 626 +ILK+H ++L IA Sbjct: 323 DILKIHSRKMNLTRGINLRKIA 344
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 178 bits (452), Expect = 1e-44 Identities = 90/209 (43%), Positives = 127/209 (60%), Gaps = 1/209 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 166 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLC 225 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARF 285 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ + Sbjct: 286 DDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL 345 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD+ GRT I K+H + + D+ E++A Sbjct: 346 PDLEGRTHIFKIHARSMSVERDIRFELLA 374
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 178 bits (452), Expect = 1e-44 Identities = 90/209 (43%), Positives = 127/209 (60%), Gaps = 1/209 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 165 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLC 224 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 225 ARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARF 284 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ + Sbjct: 285 DDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL 344 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD+ GRT I K+H + + D+ E++A Sbjct: 345 PDLEGRTHIFKIHARSMSVERDIRFELLA 373
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 178 bits (452), Expect = 1e-44 Identities = 90/209 (43%), Positives = 127/209 (60%), Gaps = 1/209 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 165 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLC 224 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 225 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARF 284 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ + Sbjct: 285 DDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL 344 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD+ GRT I K+H + + D+ E++A Sbjct: 345 PDLEGRTHIFKIHARSMSVERDIRFELLA 373
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 178 bits (452), Expect = 1e-44 Identities = 90/209 (43%), Positives = 127/209 (60%), Gaps = 1/209 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E VT+ DV G E + EVVE L PERF +G PKGVLL GPPGTGKTL Sbjct: 165 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLC 224 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDA+ Sbjct: 225 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARF 284 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR++ + Sbjct: 285 DDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSL 344 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD+ GRT I K+H + + D+ E++A Sbjct: 345 PDLEGRTHIFKIHARSMSVERDIRFELLA 373
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 177 bits (450), Expect = 2e-44 Identities = 88/204 (43%), Positives = 127/204 (62%), Gaps = 1/204 (0%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 ++D+ G+++ Q+ +E + + ERF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 170 YNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 229 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 F ++G + V+MF+G GA VRD F+ AKE APCI+F+DEIDA+ + Sbjct: 230 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDR 289 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P R Sbjct: 290 EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 349 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 IL++H DV+ E +A T Sbjct: 350 ILQIHSRKMNVHPDVNFEELARST 373
>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)| Length = 461 Score = 177 bits (450), Expect = 2e-44 Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 1/202 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T++ + G+D+ ++ EV+E +K PE F A+G PKGVLL GPPGTGKTLLA+A+A Sbjct: 142 TYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHH 201 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SGSE V+ F+G GA VR+LF A+E+AP I+F+DEID++ + Sbjct: 202 TDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI-GSRLEGGSGGD 260 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGFE I V+ ATNR DILDSALLRPGR DR++ P+ R Sbjct: 261 SEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARL 320 Query: 561 EILKVHGSNKKFDADVSLEVIA 626 +ILK+H ++L IA Sbjct: 321 DILKIHSRKMNLTRGINLRKIA 342
>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 177 bits (450), Expect = 2e-44 Identities = 90/209 (43%), Positives = 128/209 (61%), Gaps = 1/209 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD+ GRT+I K+H + D+ E++A Sbjct: 339 PDLEGRTQIFKIHTRTMNCERDIRFELLA 367
>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 426 Score = 177 bits (450), Expect = 2e-44 Identities = 90/209 (43%), Positives = 128/209 (61%), Gaps = 1/209 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD+ GRT+I K+H + D+ E++A Sbjct: 339 PDLEGRTQIFKIHTRTMNCERDIRFELLA 367
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 176 bits (447), Expect = 4e-44 Identities = 87/204 (42%), Positives = 127/204 (62%), Gaps = 1/204 (0%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 + D+ G+++ Q+ +E + + ERF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 169 YHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARACAAQT 228 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 F ++G + V+MF+G GA VRD F+ AKE +PCI+F+DEIDA+ + Sbjct: 229 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 288 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P R Sbjct: 289 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARAR 348 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 IL++H + DV+ E +A T Sbjct: 349 ILQIHSRKMNVNPDVNFEELARST 372
>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)| (Proteasomal cap subunit) Length = 437 Score = 176 bits (447), Expect = 4e-44 Identities = 90/200 (45%), Positives = 124/200 (62%), Gaps = 1/200 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 +TFD + G+ E ++ EV+E LK PE F VG + PKGVLL GPPGTGKTLLAKA+A Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 G F S V+ ++G A +R++F AKE+ PCI+F+DE+DA+ Sbjct: 238 TIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSA 297 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++TL +LLT+MDGF+ ++ ATNR D LD ALLRPGR DR+V + +P+ GR Sbjct: 298 DREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGR 357 Query: 558 TEILKVHGSNKKFDADVSLE 617 EI K+H + K + E Sbjct: 358 LEIFKIHTAKVKKTGEFDFE 377
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 176 bits (446), Expect = 5e-44 Identities = 86/204 (42%), Positives = 128/204 (62%), Gaps = 1/204 (0%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 ++D+ G+++ Q+ +E + + +RF +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 175 YNDIGGLEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 234 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 F ++G + V+MF+G GA VRD F+ AKE +PCI+F+DEIDA+ + Sbjct: 235 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 294 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P R Sbjct: 295 EVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARAR 354 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 IL++H + DV+ E +A T Sbjct: 355 ILQIHSRKMNVNPDVNFEELARST 378
>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory particle triple-A ATPase subunit 1) Length = 425 Score = 175 bits (444), Expect = 9e-44 Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 1/209 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 158 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 217 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 218 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 277 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 278 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 337 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD+ RT+I K+H + D+ E++A Sbjct: 338 PDLESRTQIFKIHTRTMNCERDIRFELLA 366
>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit| 7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory particle triple-A ATPase subunit 1a) Length = 426 Score = 175 bits (444), Expect = 9e-44 Identities = 89/209 (42%), Positives = 127/209 (60%), Gaps = 1/209 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E VT++DV G E + EVVE + PE+F +G PKGVL GPPGTGKTLL Sbjct: 159 VEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLL 218 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CIVF DE+DA+ Sbjct: 219 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARF 278 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++E ++T+ +++ ++DGF+ I V+ ATNR D LD ALLRPGR DR+V + Sbjct: 279 DDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGL 338 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD+ RT+I K+H + D+ E++A Sbjct: 339 PDLESRTQIFKIHTRTMNCERDIRFELLA 367
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 175 bits (444), Expect = 9e-44 Identities = 87/204 (42%), Positives = 128/204 (62%), Gaps = 1/204 (0%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 ++D+ G+++ Q+ +E + + E+F +G R PKGVLL GPPGTGKTL+A+A A + Sbjct: 165 YNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQT 224 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 F ++G + V+MF+G GA VRD F AKE +PCI+F+DEIDA+ + Sbjct: 225 NATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDR 284 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 E ++T+ +LL ++DGF + I V+AATNRADILD AL+R GR DR++ P R Sbjct: 285 EVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGR 344 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 IL++H +ADV+ E +A T Sbjct: 345 ILQIHSRKMNVNADVNFEELARST 368
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 175 bits (443), Expect = 1e-43 Identities = 87/206 (42%), Positives = 129/206 (62%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DD+ G + E+VE L+ P+ F A+G + P+GVL+ GPPGTGKTL+A+A+A Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 271 ETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSI---APKRDKTN 327 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + ++QLLT MDG + + ++V+AATNR + +D AL R GRFDR+V + +PD GR Sbjct: 328 GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 387 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 E+L++H N K DV LE +A T Sbjct: 388 LEVLRIHTKNMKLADDVDLEALAAET 413 Score = 169 bits (429), Expect = 5e-42 Identities = 86/209 (41%), Positives = 120/209 (57%), Gaps = 1/209 (0%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 188 + VT+DDV G+DE K++ E VE+ + P+++T G KGVL GPPGTGKTLLAKA Sbjct: 481 SVNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKA 540 Query: 189 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 368 +A E F S+ G E + M+ G S +RD+F KA+ AP +VF+DE+D++ Sbjct: 541 VATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSL 600 Query: 369 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 ++ +NQLLTEMDG + V+ ATNR D +D A+LRPGR D+ + V +PD Sbjct: 601 GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDE 660 Query: 549 RGRTEILKVHGSNKKFDADVSLEVIAMRT 635 R IL + + L IA T Sbjct: 661 NARLSILNAQLRKTPLEPGLELTAIAKAT 689
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 174 bits (441), Expect = 2e-43 Identities = 89/209 (42%), Positives = 126/209 (60%), Gaps = 1/209 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E VT+ DV G + + EVVE L PERF +G PKG+LL GPPGTGKTL Sbjct: 200 VEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLC 259 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A F + GSE V+ +VG GA VR+LF+ A+ CI+F DEIDAV Sbjct: 260 ARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARF 319 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++E ++T+ +L+T++DGF+ I V+ ATNR + LD ALLRPGR DR+V + Sbjct: 320 DDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSL 379 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD+ GR I ++H + + + E+I+ Sbjct: 380 PDLEGRANIFRIHSKSMSVERGIRWELIS 408
>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)| (CIM3 protein) (TAT-binding protein TBY1) Length = 405 Score = 174 bits (441), Expect = 2e-43 Identities = 86/202 (42%), Positives = 128/202 (63%), Gaps = 1/202 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T+D V G+ + ++ EV+E +K PE F ++G PKGV+L GPPGTGKTLLA+A+A Sbjct: 146 TYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHH 205 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SG+E V+ ++G G+ VR+LF A+E+AP I+F+DEID++ + Sbjct: 206 TDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGD 265 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGFE + I ++ ATNR DILD ALLRPGR DR++ P V R Sbjct: 266 SEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARA 325 Query: 561 EILKVHGSNKKFDADVSLEVIA 626 EIL++H ++L +A Sbjct: 326 EILRIHSRKMNLTRGINLRKVA 347
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 174 bits (441), Expect = 2e-43 Identities = 92/208 (44%), Positives = 130/208 (62%), Gaps = 3/208 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 ++F V G++E ++ EV+E LK PE F VG + PKGVLL GPPGTGKTLLA+A+A Sbjct: 129 ISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAA 188 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 GV F + S V+ ++G A +R++F AKE+ PC++F+DEIDA+ Sbjct: 189 SLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSA 248 Query: 378 NDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 551 + E ++TL +LL +MDGF+ G T II+ ATNR D LD ALLRPGR DR++ + +P+ Sbjct: 249 DREIQRTLMELLNQMDGFDYLGQTKIIM--ATNRPDTLDPALLRPGRLDRKIEIPLPNEV 306 Query: 552 GRTEILKVHGSNKKFDADVSLEVIAMRT 635 GR EILK+H ++ E + T Sbjct: 307 GRMEILKIHLEKVSKQGEIDYEALVKLT 334
>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)| Length = 403 Score = 174 bits (440), Expect = 3e-43 Identities = 88/203 (43%), Positives = 128/203 (63%), Gaps = 2/203 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T++ V G+++ ++ EV+E +K PE F ++G PKG+LL GPPGTGKTLLA+A+A Sbjct: 143 TYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHH 202 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 203 TDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSG 262 Query: 381 D-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 D E ++T+ +LL ++DGFE I V+ ATNR DILD ALLRPGR DR++ P R Sbjct: 263 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEAR 322 Query: 558 TEILKVHGSNKKFDADVSLEVIA 626 EIL++H + + L+ IA Sbjct: 323 AEILRIHSRSMNLTRGIDLKSIA 345
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 173 bits (439), Expect = 3e-43 Identities = 89/209 (42%), Positives = 126/209 (60%), Gaps = 1/209 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E VT+ DV G + + EVVE L PER+ +G PKGVLL GPPGTGKTL Sbjct: 168 VEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLC 227 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A+A+A F + GSE V+ +VG GA VR+LF+ A+ C++F DEIDAV Sbjct: 228 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARF 287 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++E ++T+ +L+ ++DGF+ I V+ ATNR D LD AL+RPGR DR+V + Sbjct: 288 DDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFAL 347 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD+ GR ILK+H + D+ +++A Sbjct: 348 PDLAGRAHILKIHAKQMSVERDIRYDLLA 376
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 173 bits (439), Expect = 3e-43 Identities = 85/204 (41%), Positives = 127/204 (62%), Gaps = 1/204 (0%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 244 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 245 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 304 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++ +P+ R Sbjct: 305 EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARAR 364 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 I+++H DV+ E +A T Sbjct: 365 IMQIHSRKMNVSPDVNYEELARCT 388
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 173 bits (439), Expect = 3e-43 Identities = 85/204 (41%), Positives = 127/204 (62%), Gaps = 1/204 (0%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 185 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 244 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 245 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 304 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++ +P+ R Sbjct: 305 EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARAR 364 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 I+++H DV+ E +A T Sbjct: 365 IMQIHSRKMNVSPDVNYEELARCT 388
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 173 bits (439), Expect = 3e-43 Identities = 85/204 (41%), Positives = 127/204 (62%), Gaps = 1/204 (0%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 188 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 247 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 248 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 307 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 E ++T+ +LL ++DGF+ NT + V+AATNR DILD ALLR GR DR++ +P+ R Sbjct: 308 EVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARAR 367 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 I+++H DV+ E +A T Sbjct: 368 IMQIHSRKMNVSPDVNYEELARCT 391
>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome| AAA-ATPase subunit RPT3) (Regulatory particle triple-A ATPase subunit 3) Length = 408 Score = 173 bits (438), Expect = 4e-43 Identities = 88/200 (44%), Positives = 123/200 (61%), Gaps = 1/200 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V+++D+ G D KQ+ E VE L E + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 152 VSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DE+DA+ Sbjct: 212 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 271 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++ L +LL +MDGF+ + V+ ATNRAD LD ALLRPGR DR++ +PD R + Sbjct: 272 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 331 Query: 558 TEILKVHGSNKKFDADVSLE 617 + +V S +V LE Sbjct: 332 RLVFQVCTSKMNLSDEVDLE 351
>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding| protein homolog) Length = 414 Score = 173 bits (438), Expect = 4e-43 Identities = 88/203 (43%), Positives = 128/203 (63%), Gaps = 2/203 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T++ V G+DE ++ EV+E +K PE F ++G PKGV++ GPPGTGKTLLA+A+A Sbjct: 154 TYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHH 213 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 214 TDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGGG 273 Query: 381 D-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 D E ++T+ +LL ++DGFE I ++ ATNR DILD ALLRPGR DR++ P+ R Sbjct: 274 DSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELAR 333 Query: 558 TEILKVHGSNKKFDADVSLEVIA 626 +ILK+H ++L IA Sbjct: 334 LDILKIHSRRMNLTRGINLRKIA 356
>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein| homolog 10) (Fragment) Length = 389 Score = 173 bits (438), Expect = 4e-43 Identities = 90/203 (44%), Positives = 128/203 (63%), Gaps = 2/203 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T+D V G+D+ ++ EV+E +K PE F ++G PKGVLL GPPGTGKTLLA+A+A Sbjct: 129 TYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 188 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++ Sbjct: 189 TDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGG 248 Query: 381 D-EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 D E ++T+ +LL ++DGFE I V+ TNR DILD ALLRPGR DR++ P GR Sbjct: 249 DSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGR 308 Query: 558 TEILKVHGSNKKFDADVSLEVIA 626 +ILK+H ++L+ I+ Sbjct: 309 LDILKIHSRKMNLTRGINLKKIS 331
>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog| Length = 413 Score = 172 bits (436), Expect = 8e-43 Identities = 88/200 (44%), Positives = 123/200 (61%), Gaps = 1/200 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G D KQ+ E VE L E + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 157 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 216 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DE+DA+ Sbjct: 217 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGA 276 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++ L +LL +MDGF+ + V+ ATNRAD LD ALLRPGR DR++ +PD R + Sbjct: 277 DREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 336 Query: 558 TEILKVHGSNKKFDADVSLE 617 + +V + +V LE Sbjct: 337 RLVFQVCTAKMNLGDEVDLE 356
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 172 bits (436), Expect = 8e-43 Identities = 89/206 (43%), Positives = 128/206 (62%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + ++QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD GR Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 E+L++H N K DV LE IA T Sbjct: 382 LEVLRIHTKNMKLSDDVDLERIAKDT 407 Score = 166 bits (419), Expect = 7e-41 Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDA 597 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ LNQLLTEMDG + ++ ATNR DI+D ALLRPGR D+ + + +PD R Sbjct: 598 GGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSR 657 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 +I K +V L +A T Sbjct: 658 HQIFKACLRKSPIAKNVDLRALARHT 683
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 172 bits (435), Expect = 1e-42 Identities = 90/206 (43%), Positives = 127/206 (61%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DDV G + E+VE L+ P F A+G + P+G+LL GPPGTGKTL+A+A+A Sbjct: 200 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 259 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 260 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI---APKREKTH 316 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+V + +PD GR Sbjct: 317 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 376 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 EIL++H N K DV LE +A T Sbjct: 377 LEILQIHTKNMKLADDVDLEQVANET 402 Score = 170 bits (430), Expect = 4e-42 Identities = 82/206 (39%), Positives = 125/206 (60%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD + R Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 652 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 ILK + DV LE +A T Sbjct: 653 VAILKANLRKSPVAKDVDLEFLAKMT 678
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 171 bits (434), Expect = 1e-42 Identities = 89/206 (43%), Positives = 127/206 (61%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGTGKTL+A+A+A Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 261 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI---APKREKTH 317 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+V + +PD GR Sbjct: 318 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGR 377 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 EIL++H N K DV LE +A T Sbjct: 378 LEILQIHTKNMKLSDDVDLEQVANET 403 Score = 166 bits (421), Expect = 4e-41 Identities = 80/206 (38%), Positives = 125/206 (60%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 593 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD + R Sbjct: 594 GGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 ILK + DV ++ +A T Sbjct: 654 MAILKANLRKSPVAKDVDVDFLAKMT 679
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 171 bits (434), Expect = 1e-42 Identities = 89/206 (43%), Positives = 127/206 (61%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGTGKTL+A+A+A Sbjct: 200 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 259 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 260 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI---APKREKTH 316 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+V + +PD GR Sbjct: 317 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 376 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 EIL++H N K DV LE +A T Sbjct: 377 LEILQIHTKNMKLADDVDLEQVANET 402 Score = 170 bits (430), Expect = 4e-42 Identities = 82/206 (39%), Positives = 125/206 (60%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD + R Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 652 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 ILK + DV LE +A T Sbjct: 653 VAILKANLRKSPVAKDVDLEFLAKMT 678
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 171 bits (434), Expect = 1e-42 Identities = 89/206 (43%), Positives = 127/206 (61%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGTGKTL+A+A+A Sbjct: 200 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 259 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 260 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI---APKREKTH 316 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+V + +PD GR Sbjct: 317 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 376 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 EIL++H N K DV LE +A T Sbjct: 377 LEILQIHTKNMKLADDVDLEQVANET 402 Score = 169 bits (427), Expect = 8e-42 Identities = 81/206 (39%), Positives = 125/206 (60%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G+++ K++ ++V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD + R Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 652 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 ILK + DV LE +A T Sbjct: 653 VAILKANLRKSPVAKDVDLEFLAKMT 678
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 171 bits (434), Expect = 1e-42 Identities = 89/206 (43%), Positives = 127/206 (61%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DD+ G + E+VE L+ P F A+G + P+G+LL GPPGTGKTL+A+A+A Sbjct: 200 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 259 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++NAP I+F+DE+DA+ Sbjct: 260 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAI---APKREKTH 316 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + ++QLLT MDG + +IV+AATNR + +D AL R GRFDR+V + +PD GR Sbjct: 317 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 376 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 EIL++H N K DV LE +A T Sbjct: 377 LEILQIHTKNMKLADDVDLEQVANET 402 Score = 170 bits (430), Expect = 4e-42 Identities = 82/206 (39%), Positives = 125/206 (60%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G+++ K++ E+V++ ++ P++F G KGVL GPPG GKTLLAKAIA Sbjct: 473 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 532 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F SI G E + M+ G + VR++F KA++ APC++F DE+D++ Sbjct: 533 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDG 592 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD + R Sbjct: 593 GGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 652 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 ILK + DV LE +A T Sbjct: 653 VAILKANLRKSPVAKDVDLEFLAKMT 678
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 171 bits (434), Expect = 1e-42 Identities = 87/206 (42%), Positives = 128/206 (62%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DD+ G E+VE L+ P+ F ++G + P+G+L+ GPPGTGKTL+A+A+A Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++N+P I+F+DEID++ Sbjct: 281 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSI---APKREKTN 337 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + ++QLLT MDG + + ++V+AATNR + +D AL R GRFDR+V V +PD GR Sbjct: 338 GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGR 397 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 EIL++H N K DV LE IA T Sbjct: 398 LEILRIHTKNMKLADDVDLEQIAAET 423 Score = 162 bits (410), Expect = 8e-40 Identities = 85/206 (41%), Positives = 118/206 (57%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V ++D+ G++E K++ E V+ + E+F G KGVL GPPGTGKTLLAKAIA Sbjct: 494 VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIAN 553 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F S+ G E + M+ G S VRD+F KA+ APC+VF+DE+D++ Sbjct: 554 ECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDS 613 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ +NQLLTEMDG + V+ ATNR D +D AL+RPGR D+ + V +PD R Sbjct: 614 GG-GDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEAR 672 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 IL+ + DV L +A T Sbjct: 673 FSILQTQLRHTPVAEDVDLRAVAKAT 698
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 171 bits (433), Expect = 2e-42 Identities = 91/209 (43%), Positives = 131/209 (62%), Gaps = 2/209 (0%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 E + +DD+ GV + E+VE L+ P+ F A+G + P+G+LL GPPGTGKTL+A Sbjct: 202 ESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIA 261 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 +A+A E G FF I+G E + G S +R F++ ++N P I+F+DEIDA+ Sbjct: 262 RAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAI----AP 317 Query: 363 XXXXXNDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 N E E+ + +QLLT MDG +G + ++V+AATNR + +D AL R GRFDR++ + + Sbjct: 318 KREKTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGI 377 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVIA 626 PD GR EIL++H N K DV LE IA Sbjct: 378 PDAVGRLEILRIHTKNMKLADDVDLEQIA 406 Score = 159 bits (403), Expect = 5e-39 Identities = 82/211 (38%), Positives = 122/211 (57%), Gaps = 2/211 (0%) Frame = +3 Query: 9 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 PNT T+ D+ G+ K++ E+V++ ++ PE++ G + +GVL GPPG GKTLLAK Sbjct: 478 PNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAK 535 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVX-XXXXX 362 AIA E F SI G E + M+ G + VRD+F KA+ APC++F DE+D++ Sbjct: 536 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGG 595 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +P Sbjct: 596 AGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLP 655 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 D R +ILK D+ L +A T Sbjct: 656 DEASRHQILKASLRKTPLSKDLDLTFLAKNT 686
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 171 bits (433), Expect = 2e-42 Identities = 84/204 (41%), Positives = 126/204 (61%), Gaps = 1/204 (0%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 150 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 209 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 210 KATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDR 269 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 E ++T+ +LL ++DGF+ T + V+AATNR DILD ALLR GR DR++ +P+ R Sbjct: 270 EVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARAR 329 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 I+++H DV+ E +A T Sbjct: 330 IMQIHSRKMNVSPDVNYEELARCT 353
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 171 bits (432), Expect = 2e-42 Identities = 83/201 (41%), Positives = 125/201 (62%), Gaps = 1/201 (0%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 + D+ G+D+ Q+ +E + + E+F +G + PKGVL+ GPPGTGKTLLA+A A + Sbjct: 169 YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQT 228 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 F ++G + V+MF+G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 229 KATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDR 288 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 E ++T+ +LL ++DGF+ N + V+AATNR DILD ALLR GR DR++ +P+ R Sbjct: 289 EVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARAR 348 Query: 564 ILKVHGSNKKFDADVSLEVIA 626 I+++H DV+ E +A Sbjct: 349 IMQIHSRKMNVSPDVNYEELA 369
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 170 bits (431), Expect = 3e-42 Identities = 88/206 (42%), Positives = 131/206 (63%), Gaps = 4/206 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+ D+ +++ +++ M ++ ++ P++F A+G P GVLL GPPG GKTLLAKA+A Sbjct: 578 VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVAN 637 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E+G+ F S+ G E + M+VG VR +F++AK +APC++F DE+DA+ Sbjct: 638 ESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGA 697 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + +NQLLTEMDG E + ++AATNR DI+D A+LRPGR D+ + V +P R Sbjct: 698 S---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADR 754 Query: 558 TEILKV---HGSNKKFDADVSLEVIA 626 ILK +G+ DADV+LE IA Sbjct: 755 LAILKTITKNGTKPPLDADVNLEAIA 780 Score = 139 bits (350), Expect = 7e-33 Identities = 76/189 (40%), Positives = 109/189 (57%), Gaps = 3/189 (1%) Frame = +3 Query: 15 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 194 + V F+DV G D ++ +++ ++ PE + +G P+GVLL GPPG GKTLLA AIA Sbjct: 260 SNVKFEDVGGNDMTLKEVCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIA 319 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 374 GE +P ++ E V G ++R+LF++A NAPCI+F+DEIDA+ Sbjct: 320 GELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAI---TPKREVA 376 Query: 375 XNDEREQTLNQLLTEMDGFE---GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 D + + QLLT MD ++V+ ATNR D LD AL R GRFDR++ + +PD Sbjct: 377 SKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 436 Query: 546 VRGRTEILK 572 R IL+ Sbjct: 437 EASRERILQ 445
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 170 bits (431), Expect = 3e-42 Identities = 91/207 (43%), Positives = 130/207 (62%), Gaps = 2/207 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI----APKREKT 319 Query: 378 NDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 N E E+ + +QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD G Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379 Query: 555 RTEILKVHGSNKKFDADVSLEVIAMRT 635 R E+L++H N K DV LE I+ T Sbjct: 380 RLEVLRIHTKNMKLAEDVDLERISKDT 406 Score = 161 bits (408), Expect = 1e-39 Identities = 82/207 (39%), Positives = 121/207 (58%), Gaps = 2/207 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXX-XXXXXXXX 374 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGD 596 Query: 375 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 ++ LNQLLTEMDG + ++ ATNR DI+DSALLRPGR D+ + + +PD Sbjct: 597 GGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDS 656 Query: 555 RTEILKVHGSNKKFDADVSLEVIAMRT 635 R I K DV + +A T Sbjct: 657 RLNIFKAALRKSPIAKDVDIGALAKYT 683
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 170 bits (431), Expect = 3e-42 Identities = 91/207 (43%), Positives = 130/207 (62%), Gaps = 2/207 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 264 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI----APKREKT 319 Query: 378 NDEREQTL-NQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 N E E+ + +QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD G Sbjct: 320 NGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIG 379 Query: 555 RTEILKVHGSNKKFDADVSLEVIAMRT 635 R E+L++H N K DV LE I+ T Sbjct: 380 RLEVLRIHTKNMKLAEDVDLERISKDT 406 Score = 166 bits (421), Expect = 4e-41 Identities = 82/206 (39%), Positives = 121/206 (58%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDA 596 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ LNQLLTEMDG + ++ ATNR DI+DSALLRPGR D+ + + +PD R Sbjct: 597 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSR 656 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 I K DV + +A T Sbjct: 657 LNIFKACLRKSPVAKDVDVTALAKYT 682
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 170 bits (430), Expect = 4e-42 Identities = 87/199 (43%), Positives = 124/199 (62%), Gaps = 1/199 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T+ DV G+D+ Q+ E VE L PE + +G R PKGV+L G PGTGKTLLAKA+A + Sbjct: 186 TYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQ 245 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F I GSE ++ ++G G VR+LF+ A+ENAP IVF+DEIDAV Sbjct: 246 TSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGE 305 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD + + Sbjct: 306 REIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKR 365 Query: 561 EILKVHGSNKKFDADVSLE 617 I ++H S +V+LE Sbjct: 366 RIFQIHTSRMTLGKEVNLE 384
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 170 bits (430), Expect = 4e-42 Identities = 81/205 (39%), Positives = 127/205 (61%), Gaps = 1/205 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T+ DV G+D+ ++ +E + +K+ ++F +G R PKG L+ GPPGTGKTLLA+A A + Sbjct: 179 TYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQ 238 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F ++ + V+M++G GA VRD F AKE AP I+F+DE+DA+ + Sbjct: 239 TNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGD 298 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGF + + V+AATNR D+LD ALLR GR DR++ +P R Sbjct: 299 REVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRA 358 Query: 561 EILKVHGSNKKFDADVSLEVIAMRT 635 +IL++H D D++ + +A T Sbjct: 359 QILQIHSRKMTTDDDINWQELARST 383
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 169 bits (429), Expect = 5e-42 Identities = 87/206 (42%), Positives = 128/206 (62%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + ++QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD GR Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGR 381 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 E+L++H N K DV LE ++ T Sbjct: 382 LEVLRIHTKNMKLAEDVDLERVSKDT 407 Score = 166 bits (421), Expect = 4e-41 Identities = 83/206 (40%), Positives = 121/206 (58%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F SI G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDA 597 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ LNQLLTEMDG + ++ ATNR DI+D ALLRPGR D+ + + +PD R Sbjct: 598 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESR 657 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 +I K DV L +A T Sbjct: 658 YQIFKSCLRKSPVAKDVDLRALAKYT 683
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 169 bits (429), Expect = 5e-42 Identities = 86/203 (42%), Positives = 127/203 (62%), Gaps = 1/203 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DD+ GV + E+VE L+ P+ F A+G + P+G+LL GPPGTGKTL+A+A+A Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F + ++N+P I+F+DEIDA+ Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAI---APKREKAH 322 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + ++ ++QLLT MDG + ++V+AATNR + +D AL R GRFDR++ + +PD GR Sbjct: 323 GEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGR 382 Query: 558 TEILKVHGSNKKFDADVSLEVIA 626 EIL++H N K DV LE +A Sbjct: 383 LEILRIHTKNMKLGEDVDLEQVA 405 Score = 166 bits (419), Expect = 7e-41 Identities = 82/210 (39%), Positives = 122/210 (58%), Gaps = 1/210 (0%) Frame = +3 Query: 9 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 PNT T+ D+ G+ K++ E+V++ ++ PE++ G + +GVL GPPG GKTLLAK Sbjct: 477 PNT--TWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAK 534 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 AIA E F SI G E + M+ G + VRD+F KA+ APC++F DE+D++ Sbjct: 535 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGS 594 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 ++ +NQ+LTEMDG + ++ ATNR DI+D A+LRPGR D+ + + +PD Sbjct: 595 VGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPD 654 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 R +I K AD+ L +A T Sbjct: 655 EASRLQIFKASLRKTPLSADLDLNFLAKNT 684
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 169 bits (429), Expect = 5e-42 Identities = 84/203 (41%), Positives = 126/203 (62%), Gaps = 1/203 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD + + Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKK 362 Query: 561 EILKVHGSNKKFDADVSLEVIAM 629 I ++H S DV+L+ + M Sbjct: 363 RIFQIHTSRMTLADDVTLDDLIM 385
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 169 bits (429), Expect = 5e-42 Identities = 84/203 (41%), Positives = 126/203 (62%), Gaps = 1/203 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD + + Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKK 362 Query: 561 EILKVHGSNKKFDADVSLEVIAM 629 I ++H S DV+L+ + M Sbjct: 363 RIFQIHTSRMTLADDVTLDDLIM 385
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 169 bits (429), Expect = 5e-42 Identities = 84/203 (41%), Positives = 126/203 (62%), Gaps = 1/203 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD + + Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKK 362 Query: 561 EILKVHGSNKKFDADVSLEVIAM 629 I ++H S DV+L+ + M Sbjct: 363 RIFQIHTSRMTLADDVTLDDLIM 385
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 169 bits (427), Expect = 8e-42 Identities = 85/203 (41%), Positives = 124/203 (61%), Gaps = 1/203 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 182 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 241 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F + GSE ++ ++G G VR+LF+ A+E+AP IVF+DEIDAV Sbjct: 242 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE 301 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD + + Sbjct: 302 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKR 361 Query: 561 EILKVHGSNKKFDADVSLEVIAM 629 I +H S DV+L + M Sbjct: 362 RIFTIHTSRMTLAEDVNLSELIM 384
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 168 bits (426), Expect = 1e-41 Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V+++D+ G++ K++ E V++ ++ PE+F G KGVL GPPG GKTLLAKAIA Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F S+ G E + M+ G + VR++F KA+++APC++F DE+D++ Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDA 597 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ LNQLLTEMDG + ++ ATNR DI+D ALLRPGR D+ + + +PD R Sbjct: 598 GGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSR 657 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 +I K D+ L +A T Sbjct: 658 HQIFKACLRKSPLSKDIDLRALAKHT 683 Score = 167 bits (422), Expect = 3e-41 Identities = 87/206 (42%), Positives = 127/206 (61%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DDV GV + E+VE L+ P+ F ++G + PKG+LL GPPG+GKTL+A+A+A Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E G FF I+G E + G S +R F++A++NAP I+F+DEID++ Sbjct: 265 ETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSI---APKREKTH 321 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + ++QLLT MDG + +IV+ ATNR + +D AL R GRFDR++ + VPD GR Sbjct: 322 GEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGR 381 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 E+L +H N K +V LE I+ T Sbjct: 382 LEVLGIHTKNMKLAEEVDLERISKDT 407
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 168 bits (426), Expect = 1e-41 Identities = 83/203 (40%), Positives = 125/203 (61%), Gaps = 1/203 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 T+ D+ G+D Q+ E VE L PE + +G + PKGV+L GPPGTGKTLLAKA+A + Sbjct: 183 TYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQ 242 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F + GSE ++ ++G G VR+LF+ A+E+ P IVF+DEIDA+ Sbjct: 243 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGE 302 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGF+ + V+ ATNR + LD AL+RPGR DR++ +PD + + Sbjct: 303 REIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKK 362 Query: 561 EILKVHGSNKKFDADVSLEVIAM 629 I ++H S DV+L+ + M Sbjct: 363 RIFQIHTSRMTLADDVTLDELIM 385
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 168 bits (426), Expect = 1e-41 Identities = 88/208 (42%), Positives = 128/208 (61%), Gaps = 1/208 (0%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 E N +T++D+ G+ + E++E LK PE F ++G PKGVL+ G PGTGKT +A Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KAIA E+ + I+G E + +G ++R +FKKA E PCI+F+DEID++ Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSI---ANK 635 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 N+ ++ ++QLLT MDG + N ++V+AATNR + +D AL R GRFDR++ + VP Sbjct: 636 RSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVP 695 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVIA 626 D +GR EIL K D DV+L IA Sbjct: 696 DEQGRYEILLTKTKKMKLDPDVNLRKIA 723 Score = 164 bits (415), Expect = 2e-40 Identities = 85/206 (41%), Positives = 122/206 (59%), Gaps = 1/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT++D+ G++E K+ E + + L+ + + KG+LL GPPG GKTLLAKAIA Sbjct: 931 VTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIAN 990 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E F S+ G E + M+ G + VRDLF KA+ +PCI+F DEID++ Sbjct: 991 ECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSL--AKERNSNTN 1048 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ND ++ +NQ+LTE+DG I ++AATNR DILD AL RPGR D+ + + +PD++ R Sbjct: 1049 NDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSR 1108 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 I K N + DV + +A RT Sbjct: 1109 YSIFKAILKNTPLNEDVDIHDMAKRT 1134
>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B| Length = 414 Score = 168 bits (425), Expect = 1e-41 Identities = 85/200 (42%), Positives = 121/200 (60%), Gaps = 1/200 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 +++ D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 217 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F + GSEFV+ ++G G VRD+F+ AKEN+P I+F+DEIDA+ Sbjct: 218 NTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGA 277 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++ L +LL +MDGF+ +T + V+ ATNR D LD ALLRPGR DR++ +PD R + Sbjct: 278 DREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQK 337 Query: 558 TEILKVHGSNKKFDADVSLE 617 + S DV LE Sbjct: 338 RLVFSTVCSRMNLSDDVDLE 357
>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog| Length = 423 Score = 167 bits (424), Expect = 2e-41 Identities = 89/208 (42%), Positives = 128/208 (61%), Gaps = 4/208 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 163 VTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F ++GSEFV+ ++G G VRD+F+ A+EN+P I+F+DEIDA+ Sbjct: 223 STTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTGA 282 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++ L +LL +MDGFE ++ + V+ ATNRAD LD ALLRPGR DR+ ++ P +R R Sbjct: 283 DREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRK--IEFPSLRDR 340 Query: 558 TE---ILKVHGSNKKFDADVSLEVIAMR 632 E I S +V L+ + +R Sbjct: 341 RERRLIFSTIASKMSLSPEVDLDSLIVR 368
>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)| (TBP-7) Length = 418 Score = 167 bits (424), Expect = 2e-41 Identities = 88/200 (44%), Positives = 120/200 (60%), Gaps = 1/200 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLRPGR DR++ +PD R + Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341 Query: 558 TEILKVHGSNKKFDADVSLE 617 I S +V LE Sbjct: 342 RLIFSTITSKMNLSEEVDLE 361
>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) (CIP21) Length = 418 Score = 167 bits (424), Expect = 2e-41 Identities = 88/200 (44%), Positives = 120/200 (60%), Gaps = 1/200 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLRPGR DR++ +PD R + Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341 Query: 558 TEILKVHGSNKKFDADVSLE 617 I S +V LE Sbjct: 342 RLIFSTITSKMNLSEEVDLE 361
>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)| (MB67-interacting protein) (TAT-binding protein 7) (TBP-7) Length = 418 Score = 167 bits (424), Expect = 2e-41 Identities = 88/200 (44%), Positives = 120/200 (60%), Gaps = 1/200 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LAKA+A Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F + GSEFV+ ++G G VRD+F+ AKENAP I+F+DEIDA+ Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGA 281 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++ L +LL +MDGF+ N + V+ ATNRAD LD ALLRPGR DR++ +PD R + Sbjct: 282 DREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 341 Query: 558 TEILKVHGSNKKFDADVSLE 617 I S +V LE Sbjct: 342 RLIFSTITSKMNLSEEVDLE 361
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 167 bits (424), Expect = 2e-41 Identities = 86/203 (42%), Positives = 122/203 (60%), Gaps = 1/203 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 ++ D+ G+D Q+ E VE L PE + +G R PKGV+L G PGTGKTLLAKA+A Sbjct: 191 SYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANS 250 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F + GSE ++ ++G G VR+LF+ A E +P IVF+DEIDAV Sbjct: 251 TSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGE 310 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++T+ +LL ++DGF+ + V+ ATNR + LD ALLRPGR DR++ +PD++ R Sbjct: 311 REIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRR 370 Query: 561 EILKVHGSNKKFDADVSLEVIAM 629 I ++H S DV+LE M Sbjct: 371 RIFQIHTSKMTLADDVNLEEFVM 393
>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome| regulatory particle ATPase-like protein 4) Length = 406 Score = 167 bits (423), Expect = 2e-41 Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 1/202 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 +++ DV G+ E ++ EVVE L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 147 ISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVAS 206 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + F + S V+ ++G A +R++F A+++ PCIVF+DEIDA+ Sbjct: 207 QLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSA 266 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++TL +LL ++DGF+ + V+ ATNR D LD ALLRPGR DR++ + +P+ + R Sbjct: 267 DREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSR 326 Query: 558 TEILKVHGSNKKFDADVSLEVI 623 EILK+H + ++ E + Sbjct: 327 LEILKIHSNKITKHGEIDFEAV 348
>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)| Length = 415 Score = 167 bits (423), Expect = 2e-41 Identities = 86/205 (41%), Positives = 120/205 (58%), Gaps = 1/205 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V + D+ G+D KQ+ E VE L E + +G P+GVL+ GPPG GKT+LA A+A Sbjct: 159 VQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAH 218 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F + GSEFV+ ++G G VRD+F+ AKEN+P I+F+DEIDA+ Sbjct: 219 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGA 278 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++ L +LL +MDGF+ T + V+ ATNRAD LD ALLRPGR DR++ +PD R + Sbjct: 279 DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 338 Query: 558 TEILKVHGSNKKFDADVSLEVIAMR 632 I + +V LE R Sbjct: 339 RLIFSTITAKMNLSEEVDLEEFVAR 363
>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog| Length = 387 Score = 167 bits (422), Expect = 3e-41 Identities = 84/205 (40%), Positives = 123/205 (60%), Gaps = 1/205 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 131 VTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVAN 190 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F ++GSEFV+ ++G G VRD+F+ A+E AP IVF+DE+D++ Sbjct: 191 HTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSA 250 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++ L +LL +MDGF+ + V+ ATNRAD +D ALLRPGR DR++ +PD R + Sbjct: 251 DREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQK 310 Query: 558 TEILKVHGSNKKFDADVSLEVIAMR 632 + S + V +E + R Sbjct: 311 RLVFNAITSKMSLNDSVDIESLVCR 335
>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)| (TAT-binding homolog 2) Length = 428 Score = 166 bits (420), Expect = 5e-41 Identities = 85/189 (44%), Positives = 122/189 (64%), Gaps = 1/189 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F ++GSEFV ++G G VRD+F+ A+ENAP I+F+DE+D++ Sbjct: 229 STKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS 288 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++ L +LLT+MDGF+ +T + V+ ATNRAD LD ALLRPGR DR+ ++ P +R R Sbjct: 289 DREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRK--IEFPYLRDR 346 Query: 558 TEILKVHGS 584 E + G+ Sbjct: 347 RERRLIFGT 355
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 166 bits (419), Expect = 7e-41 Identities = 85/206 (41%), Positives = 128/206 (62%), Gaps = 4/206 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+ D+ +++ + + M ++ ++ P++F +G P G+LL GPPG GKTLLAKA+A Sbjct: 577 VTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVAN 636 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E+G+ F S+ G E + M+VG VR +F++AK +APC++F DE+DA+ Sbjct: 637 ESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGA 696 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + + +NQLLTEMDG E + ++AATNR DI+D A+LRPGR D+ + V +P R Sbjct: 697 S---VRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADR 753 Query: 558 TEILKV---HGSNKKFDADVSLEVIA 626 ILK +G+ D DV+LE IA Sbjct: 754 VAILKTITKNGTKPPLDEDVNLETIA 779 Score = 140 bits (352), Expect = 4e-33 Identities = 78/189 (41%), Positives = 108/189 (57%), Gaps = 3/189 (1%) Frame = +3 Query: 15 TGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIA 194 + V F+DV G D ++ +++ ++ PE + +G P+GVLL GPPG GKTLLA AIA Sbjct: 259 SNVKFEDVGGNDATLKEVCKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIA 318 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 374 GE +P ++ E V G ++R+LF +A NAPCIVF+DEIDA+ Sbjct: 319 GELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAI---TPKREVA 375 Query: 375 XNDEREQTLNQLLTEMDGFE---GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 D + + QLLT MD ++V+ ATNR D LD AL R GRFDR+V + +PD Sbjct: 376 SKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPD 435 Query: 546 VRGRTEILK 572 R IL+ Sbjct: 436 EAARERILQ 444
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 165 bits (417), Expect = 1e-40 Identities = 81/202 (40%), Positives = 124/202 (61%), Gaps = 1/202 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLRPGR DR++ +D+P+ + R Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309 Query: 558 TEILKVHGSNKKFDADVSLEVI 623 +ILK+H ++ E I Sbjct: 310 LDILKIHAGPITKHGEIDYEAI 331
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 165 bits (417), Expect = 1e-40 Identities = 81/202 (40%), Positives = 124/202 (61%), Gaps = 1/202 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLRPGR DR++ +D+P+ + R Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309 Query: 558 TEILKVHGSNKKFDADVSLEVI 623 +ILK+H ++ E I Sbjct: 310 LDILKIHAGPITKHGEIDYEAI 331
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 165 bits (417), Expect = 1e-40 Identities = 81/202 (40%), Positives = 124/202 (61%), Gaps = 1/202 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V++ ++ G+ E ++ EV+E L PE F VG PKG LL GPPGTGKTLLA+A+A Sbjct: 130 VSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 189 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + F + S V+ ++G A +R++F A+++ PCI+F+DEIDA+ Sbjct: 190 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSA 249 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + E ++TL +LL +MDGF+ + ++ ATNR D LD ALLRPGR DR++ +D+P+ + R Sbjct: 250 DREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQAR 309 Query: 558 TEILKVHGSNKKFDADVSLEVI 623 +ILK+H ++ E I Sbjct: 310 LDILKIHAGPITKHGEIDYEAI 331
>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog| Length = 389 Score = 164 bits (415), Expect = 2e-40 Identities = 87/206 (42%), Positives = 123/206 (59%), Gaps = 2/206 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V++ DV G+D KQ+ E VE L + + + +G P+GVLL GPPGTGKT+L KA+A Sbjct: 131 VSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 F + GSEFV+ ++G G VRD+F+ A+ENAP I+F+DEIDA+ Sbjct: 191 STAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGA 250 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV-DVPDVRG 554 + E ++ L +LLT+MDGF+ + V+ ATNRAD LD ALLRPGR DR++ D R Sbjct: 251 DREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQ 310 Query: 555 RTEILKVHGSNKKFDADVSLEVIAMR 632 R + + + +V L+ MR Sbjct: 311 RRLVFQTITAKMLLSPEVDLDTFIMR 336
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 164 bits (415), Expect = 2e-40 Identities = 85/199 (42%), Positives = 120/199 (60%), Gaps = 1/199 (0%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 ++ D+ G D KQ+ E VE L + +G P+GVLL GPPGTGKT+LAKA+A Sbjct: 148 SYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHH 207 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F + GSEFV+ ++G G VRD+F+ A+EN+P I+F+DEIDA+ + Sbjct: 208 TSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGAD 267 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 E ++ L +LL +MDGF+ + + V+ ATNR D LD ALLRPGR DR++ +PD R + Sbjct: 268 REVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKR 327 Query: 561 EILKVHGSNKKFDADVSLE 617 I +V S +V LE Sbjct: 328 LIFQVITSKMNLSDEVDLE 346
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 164 bits (414), Expect = 3e-40 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 1/208 (0%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 M+ + ++ D+ G++ Q+ E VE L PE + +G + PKGV+L G PGTGKTLL Sbjct: 173 MDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLL 232 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA+A + F I GSE ++ ++G G R +FK A ENAP IVF+DEIDA+ Sbjct: 233 AKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRY 292 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 E ++T+ +LL ++DGF+ + V+ ATN+ + LD AL+RPGR DR++ + Sbjct: 293 DSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFEN 352 Query: 540 PDVRGRTEILKVHGSNKKFDADVSLEVI 623 PD+ + +IL +H S DV+LE + Sbjct: 353 PDLSTKKKILGIHTSKMNLSEDVNLETL 380
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 162 bits (410), Expect = 8e-40 Identities = 77/204 (37%), Positives = 124/204 (60%), Gaps = 1/204 (0%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 + D+ G+ + ++ E + +++ ++F +G + PKG L+ GPPGTGKTLLA+A A ++ Sbjct: 184 YSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQS 243 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 F ++ + V+MF+G GA VRD F AKE +P I+F+DE+DA+ + Sbjct: 244 NATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEKAGDR 303 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 E ++T+ +LL ++DGF + + V+AATNR D LD ALLR GR DR++ +P+ R Sbjct: 304 EVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVG 363 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 IL++H D D++ E +A T Sbjct: 364 ILRIHSRKMAIDDDINWEELARST 387
>AFG2_YEAST (P32794) Protein AFG2| Length = 780 Score = 156 bits (395), Expect = 4e-38 Identities = 89/209 (42%), Positives = 120/209 (57%), Gaps = 4/209 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V + D+ G +E K E+++ L+ E F +G PKGVLL GPPG KTL AKA+A Sbjct: 513 VYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALAT 572 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E+G+ F ++ G E +VG +R++F+KA+ AP I+F DEIDA+ Sbjct: 573 ESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDGSSTSA 632 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 L LL E+DG E G+++VAATNR D +D+ALLRPGR DR + V PDV R Sbjct: 633 ---ANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNAR 689 Query: 558 TEILKVHGSNKKFDAD---VSLEVIAMRT 635 EILK KKF+ + V L +A RT Sbjct: 690 LEILK--KCTKKFNTEESGVDLHELADRT 716 Score = 130 bits (327), Expect = 3e-30 Identities = 72/210 (34%), Positives = 118/210 (56%), Gaps = 5/210 (2%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 +++ V G+D+ + +E L +P F++ G P+G+LL GPPGTGKT+L + +A Sbjct: 242 LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 301 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + +I+G V ++G + +RD+F +A++ P I+F+DEID++ Sbjct: 302 TSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSGE 361 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 + R + LLT MDG ++V+AATNR + +D AL RPGRFD++V + +PDV R Sbjct: 362 VESR--VVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDAR 419 Query: 558 TEILKVHGSNKKFDADV----SLEVIAMRT 635 +IL S D V +++ IA +T Sbjct: 420 FDILTKQFSRMSSDRHVLDSEAIKYIASKT 449
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 155 bits (391), Expect = 1e-37 Identities = 81/200 (40%), Positives = 119/200 (59%), Gaps = 2/200 (1%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 ++ D+ G++ Q+ E VE L PE + +G + PKGV+L G PGTGKTLLAKA+A + Sbjct: 189 SYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 248 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 F + GSE ++ ++G G VR LF A+E++P IVF+DEIDA+ Sbjct: 249 TSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAE 308 Query: 381 DEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 E ++T+ +LL ++DGF+ I V+ ATNR LD AL+RPGR DR++ + PD + Sbjct: 309 REIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATK 368 Query: 558 TEILKVHGSNKKFDADVSLE 617 +I +H S DV+LE Sbjct: 369 RKIFTIHTSKMNLGEDVNLE 388
>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAY4) Length = 1024 Score = 154 bits (388), Expect = 3e-37 Identities = 85/211 (40%), Positives = 126/211 (59%), Gaps = 3/211 (1%) Frame = +3 Query: 9 PNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 188 PN G +DDV G++ K+D ++ +E K + + G + G+L GPPGTGKTLLAKA Sbjct: 714 PNVG--WDDVGGMEGVKKDILDTIETPLKYPHWFSDGVKKRSGILFYGPPGTGKTLLAKA 771 Query: 189 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 368 IA + FFS+ G E + M++G + VR +F+KA++ PC+VF DE+D+V Sbjct: 772 IATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSV-APQRGNQ 830 Query: 369 XXXNDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 ++ ++QLL E+DG G G+ VV ATNR D+LD ALLRPGRFD+ + + + Sbjct: 831 GDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIS 890 Query: 543 DVRGRTE-ILKVHGSNKKFDADVSLEVIAMR 632 D + + I++ + ADVSLE I+ R Sbjct: 891 DTHEKQQTIMEALTRKFRLAADVSLEAISKR 921
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 153 bits (387), Expect = 4e-37 Identities = 82/203 (40%), Positives = 121/203 (59%), Gaps = 1/203 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DD+ G+ +AK +E +E+ K F++ R+ G+LL G PG GKTLLA A+A Sbjct: 796 VRWDDIGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVAA 855 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + G+ F SI G E + ++G VR+LF++A+ PCI+F DE D++ Sbjct: 856 QCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 915 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 D + +NQ+LT+MDG EG G+ V+AAT+R D++DSALLRPGR D+ V D+PD R Sbjct: 916 TD---RVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDR 972 Query: 558 TEILKVHGSNKKFDADVSLEVIA 626 +IL+ N V+L +A Sbjct: 973 LDILQSVTRNMNVSKSVNLSSVA 995
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 153 bits (387), Expect = 4e-37 Identities = 89/207 (42%), Positives = 121/207 (58%), Gaps = 2/207 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+DDV G+ + K+ + VE+ +K F +G +G+LL GPPG KT LAKA A Sbjct: 283 VTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAAN 342 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 A FFS+S +E M+VG G + +R+ F++A+ +P I+F DE D V Sbjct: 343 AAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSN 402 Query: 378 NDE-REQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 + E+ L+ LLTEMDG E GI+V+AATNR +D+AL+RPGRFD + V PD+ Sbjct: 403 SSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEA 462 Query: 555 RTEILKVHGSNKKFDADVSLEVIAMRT 635 R EIL+VH N DV L IA T Sbjct: 463 RFEILQVHTRNMTLGDDVDLRKIAEET 489 Score = 103 bits (256), Expect = 6e-22 Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 8/207 (3%) Frame = +3 Query: 33 DVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGV 209 ++ G + A Q E++ F + P +G + P+G+LL GPPGTGKT L +A+ E Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82 Query: 210 PFFSISGSEFVEMFVGVGASRVRDLFKKAKENA----PCIVFVDEIDAVXXXXXXXXXXX 377 +S G +R+ F +A +A P ++F+DEID + Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDAR---- 138 Query: 378 NDEREQTLNQLLTEMDGFEGNTG---IIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 ++ + +QL T MD + ++ ++VVA+TNR D +D AL R GRFD V V P+ Sbjct: 139 REQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNE 198 Query: 549 RGRTEILKVHGSNKKFDADVSLEVIAM 629 R +IL+++ D V L+ IA+ Sbjct: 199 EDRLKILQLYTKKVNLDPSVDLQAIAI 225
>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS8) Length = 1030 Score = 151 bits (382), Expect = 1e-36 Identities = 81/205 (39%), Positives = 127/205 (61%), Gaps = 2/205 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+DD+ G+D K + ++ ++ LK PE FT+ G + G+L GPPGTGKTL+AKAIA Sbjct: 729 VTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAIAT 787 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + FFS+ G E + M++G + VR +F+KA+E PC++F DEID+V Sbjct: 788 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSV-APKRGNQGDS 846 Query: 378 NDEREQTLNQLLTEMDGFEGNT-GIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 ++ ++QLL E+DG + G+ V+ ATNR D+LD ALLRPGRFD+ + + +PD Sbjct: 847 GGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDT 906 Query: 555 RTEILKVHGSNKKFDADVSLEVIAM 629 + ++ + +KF D +++I + Sbjct: 907 K-QLNILEALTRKFVLDNDVKLIEL 930
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 151 bits (381), Expect = 2e-36 Identities = 80/204 (39%), Positives = 126/204 (61%), Gaps = 3/204 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+DD+ G+D K + M+ ++ LK PE F++ G + G+L GPPGTGKTLLAKAIA Sbjct: 699 VTWDDIGGMDVVKGEIMDTIDMPLKHPELFSS-GMKKRSGILFYGPPGTGKTLLAKAIAS 757 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 758 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 816 Query: 378 NDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV-R 551 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + + D + Sbjct: 817 GGVMDRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDTDK 876 Query: 552 GRTEILKVHGSNKKFDADVSLEVI 623 + I+K +KF + ++++ Sbjct: 877 KQANIIK--ALTRKFTLESGIDIL 898
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 150 bits (379), Expect = 3e-36 Identities = 81/204 (39%), Positives = 123/204 (60%), Gaps = 4/204 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V ++DV G+D K + ++ +E LK PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 810 VKWEDVGGLDVVKDEILDTIEMPLKHPELFSK-GMKKRSGILFYGPPGTGKTLLAKAIAT 868 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 869 NFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 927 Query: 378 NDEREQTLNQLLTEMDGF---EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 ++ ++QLL E+DG EG G+ VV ATNR D+LD ALLRPGRFD+ + + + D Sbjct: 928 GGVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADT 987 Query: 549 RGRTEILKVHGSNKKFDADVSLEV 620 + + + +KF D S+++ Sbjct: 988 HEKQAKI-IQALTRKFQLDPSVDL 1010 Score = 30.8 bits (68), Expect = 3.5 Identities = 35/167 (20%), Positives = 73/167 (43%), Gaps = 10/167 (5%) Frame = +3 Query: 165 GKTLLAKAIAGEAGVPFFSISGSEFV-EMFVGVGASRVRDLFKKAKENA-PCIVFVDEID 338 GK L + IA E G + + + + V +R + ++ I+++ I+ Sbjct: 576 GKATLVRRIATEFGANLLELDAYDLLNQASVSKTIGTIRGKSDRVVDSCCSVILYIRHIE 635 Query: 339 AVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 518 A+ N +++ +++ L E+ + G I + +TN AD + + +FD Sbjct: 636 ALAKKPDP-----NQQQKDSMSLRLAELIDEYTSKGAIFIGSTNDADAISELIRSKFKFD 690 Query: 519 RQVSVDVPDVRGR----TEILKVHGSNKK----FDADVSLEVIAMRT 635 +S++VP R T++L + K DVSL+ +A+++ Sbjct: 691 --ISINVPTEPERKLILTDLLDDMKTKDKTPVVLRPDVSLDTLALQS 735
>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1459 Score = 149 bits (377), Expect = 5e-36 Identities = 87/212 (41%), Positives = 127/212 (59%), Gaps = 6/212 (2%) Frame = +3 Query: 9 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 PN G +DDV G+ K +E ++ L++PE F A G + G+L GPPGTGKTLLAK Sbjct: 1025 PNVG--WDDVGGLTNVKDALVETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAK 1081 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 AIA E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1082 AIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGN 1140 Query: 366 XXXXNDEREQTLNQLLTEMDGFEG----NTGIIVVAATNRADILDSALLRPGRFDRQVSV 533 ++ ++QLL E+DG G + G+ V+ ATNR D+LD+ALLRPGRFD+ + + Sbjct: 1141 QGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYL 1200 Query: 534 DVPDV-RGRTEILKVHGSNKKFDADVSLEVIA 626 V D R + IL+ DVSL+ +A Sbjct: 1201 GVSDTHRKQATILEALTRKFALHPDVSLDRVA 1232
>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)| Length = 820 Score = 149 bits (377), Expect = 5e-36 Identities = 84/203 (41%), Positives = 114/203 (56%), Gaps = 1/203 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DDV G+D + F +V +KKP+ + A G + G LL GPPG GKTL+AKA A Sbjct: 525 VKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAAN 584 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 EAG F I G+E + +VG +R LF++A+ APC++F DE+DA+ Sbjct: 585 EAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGAWV 644 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 E+ LNQ L E+DG E + V+ ATNR D++D A LRPGRF + V +P+ R Sbjct: 645 ---VERLLNQFLVELDGGE-RRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPNADER 700 Query: 558 TEILKVHGSNKKFDADVSLEVIA 626 ILK K D V L+ IA Sbjct: 701 ASILKAIARKKPIDPSVDLDGIA 723 Score = 143 bits (361), Expect = 4e-34 Identities = 89/226 (39%), Positives = 119/226 (52%), Gaps = 15/226 (6%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 +E G TF D G+ + + M V+ + PE F +G + P G+L GPPG GKT L Sbjct: 224 VEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKL 283 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 A AIA EAGVPF+ IS +E + G +R+LF KA AP IVF+DEIDA+ Sbjct: 284 ANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAI----- 338 Query: 360 XXXXXXNDERE---QTLNQLLTEMDGFEGNTG-----------IIVVAATNRADILDSAL 497 N +RE + + QLLT MDG GN G ++V+ ATNR D LD AL Sbjct: 339 -GSKRENQQREMEKRIVTQLLTCMDG-PGNKGDKNAPDSSAGFVLVIGATNRPDALDPAL 396 Query: 498 LRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 R GRF+ ++++ PD R EIL V + + + IA T Sbjct: 397 RRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLT 442
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 149 bits (376), Expect = 7e-36 Identities = 76/200 (38%), Positives = 118/200 (59%), Gaps = 5/200 (2%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+ +V + + + M +V+ +K+PE + VG P GVLL GPPG GKTLLAKA+A Sbjct: 530 VTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVAN 589 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E+ F SI G E + +VG +R +F +A+ + PC++F DE+DA+ Sbjct: 590 ESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDAL---VPRRDTSL 646 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 ++ + +N LLTE+DG GI V+ ATNR D++D A+LRPGR D+ + +++P+ + Sbjct: 647 SESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEK 706 Query: 558 TEILKV----HGSNKKFDAD 605 +I+K HG+ D D Sbjct: 707 LDIIKTLTKSHGTPLSSDVD 726 Score = 142 bits (357), Expect = 1e-33 Identities = 86/214 (40%), Positives = 117/214 (54%), Gaps = 5/214 (2%) Frame = +3 Query: 9 PNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 PN+ + + G+D+ ME++ + PE F + G P+GVLL GPPG GKT +A Sbjct: 200 PNSSLK--SLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIAN 257 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 A+AGE VPF SIS V G ++RDLF +A+ APC+VF DEIDA+ Sbjct: 258 ALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGG 317 Query: 366 XXXXNDEREQTLNQLLTEMD--GFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSV 533 + R + QLLT MD E G +I++ ATNR D LD+AL R GRFDR++ + Sbjct: 318 AQREMERR--IVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICL 375 Query: 534 DVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 +VP+ R ILK N K D + +A T Sbjct: 376 NVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKLT 409
>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1017 Score = 148 bits (373), Expect = 2e-35 Identities = 79/202 (39%), Positives = 121/202 (59%), Gaps = 3/202 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+DDV G+ K ME ++ LK PE F + G + G+L GPPGTGKTLLAKAIA Sbjct: 715 VTWDDVGGLSSVKDAIMETIDLPLKHPELFGS-GLKKRSGILFYGPPGTGKTLLAKAIAT 773 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 774 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSV-APKRGNQGDS 832 Query: 378 NDEREQTLNQLLTEMDGFEGN-TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 ++ ++QLL E+DG + G+ ++ ATNR D+LD ALLRPGRFD+ + + + D R Sbjct: 833 GGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTRE 892 Query: 555 R-TEILKVHGSNKKFDADVSLE 617 + I++ K +D++ + Sbjct: 893 KQANIMRALTRKFKVSSDINFD 914
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 148 bits (373), Expect = 2e-35 Identities = 82/204 (40%), Positives = 117/204 (57%), Gaps = 1/204 (0%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 +D + G+ E +Q M+ ++ K PE F + R G+LL GPPGTGKTLLA IA E+ Sbjct: 839 WDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIARES 898 Query: 204 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXND 383 + F S+ G E + ++G VRD+F +A+ PCI+F DE +++ D Sbjct: 899 RMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTD 958 Query: 384 EREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTE 563 + +NQLLT++DG EG G+ V+AAT+R D++D ALLRPGR D+ V PD R E Sbjct: 959 ---RVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLE 1015 Query: 564 ILKVHGSNKKFDADVSLEVIAMRT 635 IL V + DV L+ +A T Sbjct: 1016 ILNVLSDSLPLADDVDLQHVASVT 1039
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 147 bits (370), Expect = 3e-35 Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 7/211 (3%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+DDV G+ K E ++ L++PE F A G + G+L GPPGTGKTLLAKAIA Sbjct: 988 VTWDDVGGLGNVKDAITETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAKAIAT 1046 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1047 EYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGNQGDS 1105 Query: 378 NDEREQTLNQLLTEMDGFEGNT----GIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + V D Sbjct: 1106 GGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSD 1165 Query: 546 VRGRTEILKVHGSNKKF--DADVSLEVIAMR 632 + ++ + +KF VSL +A R Sbjct: 1166 THDK-QVTIMEALTRKFTLHPTVSLRSVAER 1195
>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)| Length = 1388 Score = 146 bits (369), Expect = 4e-35 Identities = 84/210 (40%), Positives = 124/210 (59%), Gaps = 6/210 (2%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 VT+DDV G++ K E ++ L++PE F A G + G+L GPPGTGKTLLAKAIA Sbjct: 991 VTWDDVGGLNNVKDAVTETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAKAIAT 1049 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 1050 EYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSV-APKRGNQGDS 1108 Query: 378 NDEREQTLNQLLTEMDGFEG----NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 ++ ++QLL E+DG G + G+ V+ ATNR D+LD ALLRPGRFD+ + + V D Sbjct: 1109 GGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSD 1168 Query: 546 VRGR-TEILKVHGSNKKFDADVSLEVIAMR 632 + +IL+ VSL +A + Sbjct: 1169 THDKQLKILEALTRKFTLHPSVSLHSVAQQ 1198
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 145 bits (367), Expect = 8e-35 Identities = 83/211 (39%), Positives = 124/211 (58%), Gaps = 7/211 (3%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V ++D+ G+D K + M+ ++ LK PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 836 VKWEDIGGLDLVKDEIMDTIDMPLKHPELFSN-GLKKRSGILFYGPPGTGKTLLAKAIAT 894 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + FFS+ G E + M++G + VR +F+KA++ PC++F DE+D+V Sbjct: 895 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSV-APKRGNQGDS 953 Query: 378 NDEREQTLNQLLTEMDGFEGNT-----GIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 ++ ++QLL E+DG G G+ VV ATNR D+LD ALLRPGRFD+ + + + Sbjct: 954 GGVMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIS 1013 Query: 543 DV-RGRTEILKVHGSNKKFDADVSLEVIAMR 632 D +++IL+ K +V L IA R Sbjct: 1014 DTDEKQSKILEALTRKFKLADNVDLYEIAKR 1044
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 144 bits (363), Expect = 2e-34 Identities = 79/205 (38%), Positives = 123/205 (60%), Gaps = 3/205 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V ++D+ G++ K + ++ ++ LK PE F A G + G+L GPPGTGKTLLAKA+A Sbjct: 720 VFWEDIGGLEMVKGEILDTIDMPLKFPELF-ASGMKKRSGILFYGPPGTGKTLLAKAVAT 778 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + FFS+ G E + M++G + VR +F++A++ PC++F DE+D+V Sbjct: 779 NFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSV-APKRGNQGDS 837 Query: 378 NDEREQTLNQLLTEMDGFE-GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 ++ ++QLL E+DG G G+ V+ ATNR D+LD ALLRPGRFD+ + + + D Sbjct: 838 GGVMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNE 897 Query: 555 R-TEILKVHGSNKKFDADVSLEVIA 626 + IL+ D DVSL+ +A Sbjct: 898 KQANILRALTRKFTLDPDVSLDDLA 922
>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 948 Score = 144 bits (362), Expect = 3e-34 Identities = 80/206 (38%), Positives = 123/206 (59%), Gaps = 4/206 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V +DD+ G++EAK + ++ L+ PE F+ G + GVLL GPPGTGKTLLAKA+A Sbjct: 652 VNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVAT 710 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E + F SI G E + M+VG + VR++F+KA+ ++PC++F DE+D++ Sbjct: 711 ELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG 770 Query: 378 NDEREQTLNQLLTEMDGF--EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV-PDV 548 N ++ ++QLL E+D + N + V+ ATNR D+LD +LLRPGRFD+ V + + Sbjct: 771 N-VMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSE 829 Query: 549 RGRTEILKVHGSNKKFDADVSLEVIA 626 + +L+ K D + L IA Sbjct: 830 ESKASMLRALTKTFKLDETIDLNEIA 855 Score = 50.1 bits (118), Expect = 6e-06 Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 2/167 (1%) Frame = +3 Query: 141 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC-I 317 LL G P TGKT + +A P F+IS EF + +++ D+F + +PC I Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKL-DMFVQNVVKSPCAI 484 Query: 318 VFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTG-IIVVAATNRADILDSA 494 +FV ++D + +++ LL+++D + G IV+ + + + Sbjct: 485 IFVKDLDVLSISSDEGNIVPG---SKSIQILLSKIDLVKSPQGRYIVIGTCHSIEKIPYE 541 Query: 495 LLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 +L F+ + S ++ R E+LK++ +N D +SL+ +A++T Sbjct: 542 ILSESFFELKFS--ELEMDERLELLKIYANNVIIDKRISLKDVALKT 586
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 144 bits (362), Expect = 3e-34 Identities = 78/204 (38%), Positives = 123/204 (60%), Gaps = 4/204 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V ++DV G+D K + ++ ++ +K PE F+ G + G+L GPPGTGKTLLAKAIA Sbjct: 816 VKWEDVGGLDVVKDEILDTIDMPMKHPELFSN-GIKKRSGILFYGPPGTGKTLLAKAIAT 874 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 + FFS+ G E + M++G + VR +F++A++ PC+VF DE+D+V Sbjct: 875 NFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPCVVFFDELDSV-APKRGNQGDS 933 Query: 378 NDEREQTLNQLLTEMDGF---EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 ++ ++QLL E+DG +G G+ VV ATNR D+LD ALLRPGRFD+ + + V D Sbjct: 934 EGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSDT 993 Query: 549 RGRTEILKVHGSNKKFDADVSLEV 620 + + + ++KF S+++ Sbjct: 994 HEKQSKI-MEALSRKFHLHPSVDL 1016
>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 980 Score = 144 bits (362), Expect = 3e-34 Identities = 75/201 (37%), Positives = 119/201 (59%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 V++ DV G+ E K++ +E ++ + ++G R G+LL GPPGTGKTLLAKA+A E Sbjct: 702 VSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATE 760 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 + F S+ G E + M+VG VR++F +A+ APCI+F DE+D++ Sbjct: 761 CSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSL-APSRGRSGDSG 819 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 560 ++ ++QLL E+DG + V+ ATNR D+LD ALLRPGRFD+ V V + R + Sbjct: 820 GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRA-S 878 Query: 561 EILKVHGSNKKFDADVSLEVI 623 ++ + +KF + S+ ++ Sbjct: 879 QLRVLSAITRKFKLEPSVSLV 899 Score = 45.8 bits (107), Expect = 1e-04 Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 1/166 (0%) Frame = +3 Query: 138 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 317 VLL GPPG GKT + A G+ + S G ++++ +F +A+ P + Sbjct: 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAV 525 Query: 318 VFVDEIDAVXXXXXXXXXXXNDEREQ-TLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 494 + + +D + D R L LL D ++VVA T+RA L + Sbjct: 526 LLLTAVDLL---GRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDLPAD 582 Query: 495 LLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMR 632 + F ++ V R IL+ ++ +V+L +A R Sbjct: 583 V--QTAFPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARR 626
>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 981 Score = 144 bits (362), Expect = 3e-34 Identities = 77/199 (38%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 V++ DV G+ + K++ +E ++ + ++G R G+LL GPPGTGKTLLAKA+A E Sbjct: 703 VSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATE 761 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 + F S+ G E + M+VG VR++F +A+ APCI+F DE+D++ Sbjct: 762 CSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSL-APSRGRSGDSG 820 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR-GR 557 ++ ++QLL E+DG + V+ ATNR D+LD ALLRPGRFD+ V V + R + Sbjct: 821 GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQ 880 Query: 558 TEILKVHGSNKKFDADVSL 614 +L K +A VSL Sbjct: 881 LRVLSAITRKFKLEASVSL 899 Score = 44.3 bits (103), Expect = 3e-04 Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 1/166 (0%) Frame = +3 Query: 138 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 317 VLL GPPG+GKT A G+ + S ++++ F +A+ P + Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526 Query: 318 VFVDEIDAVXXXXXXXXXXXNDER-EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 494 + + +D + D R TL LL + D ++VVA T+R L + Sbjct: 527 LLLTAVDLL---GRDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPTD 583 Query: 495 LLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMR 632 + F ++ V V R IL+ ++ +V+L +A R Sbjct: 584 V--QTAFPHELEVPVLSEAQRLSILQALTAHLPLGQEVNLPQLARR 627
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 144 bits (362), Expect = 3e-34 Identities = 76/196 (38%), Positives = 115/196 (58%), Gaps = 1/196 (0%) Frame = +3 Query: 15 TGVTFDDVAGVDEAKQDFMEVVEFLKKPER-FTAVGARIPKGVLLVGPPGTGKTLLAKAI 191 T + + D+ + AK +E +E+ K E F R+ G+LL G PG GKTLLA A+ Sbjct: 692 TNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAV 751 Query: 192 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 371 A + G+ F S+ G E + F+G +R+LF++A+ PCI+F DE D++ Sbjct: 752 AQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDST 811 Query: 372 XXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 551 D + +NQLLT+MDG EG G+ ++AAT+R D++DSALLRPGR D+ V ++P Sbjct: 812 GVTD---RVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTES 868 Query: 552 GRTEILKVHGSNKKFD 599 R +IL+ ++K D Sbjct: 869 ERLDILQAIVNSKDKD 884
>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type| ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6) Length = 978 Score = 144 bits (362), Expect = 3e-34 Identities = 77/199 (38%), Positives = 116/199 (58%), Gaps = 1/199 (0%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 V++ DV G+ + K++ +E ++ + ++G R G+LL GPPGTGKTLLAKA+A E Sbjct: 700 VSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLR-RSGLLLHGPPGTGKTLLAKAVATE 758 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 + F S+ G E + M+VG VR++F +A+ APCI+F DE+D++ Sbjct: 759 CSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSL-APSRGRSGDSG 817 Query: 381 DEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR-GR 557 ++ ++QLL E+DG + V+ ATNR D+LD ALLRPGRFD+ V V + R + Sbjct: 818 GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQ 877 Query: 558 TEILKVHGSNKKFDADVSL 614 +L K +A VSL Sbjct: 878 LRVLSAITRKFKLEASVSL 896 Score = 42.7 bits (99), Expect = 9e-04 Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 1/166 (0%) Frame = +3 Query: 138 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCI 317 VLL GPPG+GKT A G+ + S ++++ F +A+ P + Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525 Query: 318 VFVDEIDAVXXXXXXXXXXXNDER-EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 494 + + +D + D R TL LL + D ++VVA T+R L + Sbjct: 526 LLLTALDLL---GRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTD 582 Query: 495 LLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMR 632 + F ++ V V R +L+ ++ +V+L +A R Sbjct: 583 VRT--AFPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARR 626
>TBP7_CAEEL (P54816) TAT-binding homolog 7| Length = 1242 Score = 132 bits (333), Expect = 7e-31 Identities = 83/219 (37%), Positives = 118/219 (53%), Gaps = 8/219 (3%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 M ++ V FD V G+ Q EVV F + PE F PKGV+ GPPGTGKTL+ Sbjct: 382 MSVDSSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441 Query: 180 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 344 A+A+A E V FF G++ + +VG ++R LF +A P I+F DEID + Sbjct: 442 ARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGL 501 Query: 345 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 524 + ++ LL MDG +G ++V+ ATNR D LD AL RPGRFDR+ Sbjct: 502 APVRSSKQDQIH---ASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPGRFDRE 558 Query: 525 VSVDVPDVRGRTEILKVHGSNKKFDADV--SLEVIAMRT 635 + +PD+ R +IL +H S + + + +L+ IA RT Sbjct: 559 LRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERT 597
>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)| Length = 890 Score = 130 bits (328), Expect = 3e-30 Identities = 74/209 (35%), Positives = 112/209 (53%), Gaps = 18/209 (8%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 +TF D+ G++ KQ+ + V FL K + ++ P G L GPPGTGKTL+AKA++ E Sbjct: 346 ITFRDIGGMESLKQE-LATVAFLLKQKNYSN---SYPMGYLFAGPPGTGKTLMAKAMSYE 401 Query: 201 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXN 380 A P+ + GS+F GV +RV DLFK+ + +PCI+++DEID++ Sbjct: 402 AETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANKQLE 461 Query: 381 DER------------------EQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRP 506 + + L Q L MDG++ +I++ ATNR + LD A++RP Sbjct: 462 QLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRP 521 Query: 507 GRFDRQVSVDVPDVRGRTEILKVHGSNKK 593 GRFDRQ+ P R +IL++ N K Sbjct: 522 GRFDRQIVFSPPFFEERKDILRIFLRNTK 550
>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494| Length = 371 Score = 130 bits (327), Expect = 3e-30 Identities = 67/203 (33%), Positives = 115/203 (56%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG 206 F ++ G +EAK+ ++++L+ P+ F G PK VL GPPGTGKTL+A+A+A E Sbjct: 123 FSEIIGQEEAKKKCRIIMKYLENPKLF---GEWAPKNVLFYGPPGTGKTLMARALATETN 179 Query: 207 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDE 386 F + E + VG + +R+L+++A E+APCIVF+DE+DA+ + Sbjct: 180 SSFILVKAPELIGEHVGDASKMIRELYQRASESAPCIVFIDELDAI--GLSREYQSLRGD 237 Query: 387 REQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEI 566 + +N LLTE+DG + N G++ +AATN +LD A+ RF+ ++ +P+ R +I Sbjct: 238 VSEVVNALLTELDGIKENEGVVTIAATNNPAMLDPAI--RSRFEEEIEFKLPNDEERLKI 295 Query: 567 LKVHGSNKKFDADVSLEVIAMRT 635 ++++ +L+ +T Sbjct: 296 MELYAKKMPLPVKANLKEFVEKT 318
>TBP7_YEAST (P40340) TAT-binding homolog 7| Length = 1379 Score = 128 bits (321), Expect = 2e-29 Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 6/207 (2%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG 197 V FDD+ G+D E+V L PE + P+GVL GPPGTGKTL+A+A+A Sbjct: 410 VNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAA 469 Query: 198 -----EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 E + FF G++ + +VG ++R LF++AK++ P I+F DEID + Sbjct: 470 SCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRSS 529 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 + ++ LL MDG + +IV+ ATNR D +D AL RPGRFDR+ +P Sbjct: 530 KQEQIH---ASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLP 586 Query: 543 DVRGRTEILKVHGSNKKFDADVSLEVI 623 DV+ R +IL++ +K+ + +S I Sbjct: 587 DVKARFKILQI--QTRKWSSPLSTNFI 611
>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2| Length = 1040 Score = 128 bits (321), Expect = 2e-29 Identities = 78/198 (39%), Positives = 105/198 (53%), Gaps = 6/198 (3%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 M+ +T V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 72 MQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 131 Query: 180 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 344 A+A+A E V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 132 ARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGL 191 Query: 345 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 524 + TL L MDG + I+V+ ATNR D +D AL RPGRFDR+ Sbjct: 192 APVRSSRQDQIHSSIVSTL---LALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDRE 248 Query: 525 VSVDVPDVRGRTEILKVH 578 +PD R EILK+H Sbjct: 249 FLFSLPDKNARKEILKIH 266
>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c| Length = 609 Score = 127 bits (319), Expect = 3e-29 Identities = 86/239 (35%), Positives = 123/239 (51%), Gaps = 30/239 (12%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 176 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYADIGGLSRQIEQIRDAVELPFLHK-ELYREYSLRPPKGVLLYGPPGCGKTL 301 Query: 177 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 308 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 309 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRAD 479 P IVF DE+D++ +D + QLL+E+DG EG +IV+ A+NR D Sbjct: 362 EGTPVIVFFDEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNRED 419 Query: 480 ILDSALLRPGRFDRQVSVDVPDVRGR--------TEILKVHGSN-KKFDADVSLEVIAM 629 ++D A+LRPGR D ++ ++ PD TE L VH + +FD D S + AM Sbjct: 420 MIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAEFDGDRSACIKAM 478
>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175| Length = 609 Score = 127 bits (319), Expect = 3e-29 Identities = 86/239 (35%), Positives = 123/239 (51%), Gaps = 30/239 (12%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 176 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYADIGGLSRQIEQIRDAVELPFLHK-ELYREYSLRPPKGVLLYGPPGCGKTL 301 Query: 177 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 308 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 309 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRAD 479 P IVF DE+D++ +D + QLL+E+DG EG +IV+ A+NR D Sbjct: 362 EGTPVIVFFDEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNRED 419 Query: 480 ILDSALLRPGRFDRQVSVDVPDVRGR--------TEILKVHGSN-KKFDADVSLEVIAM 629 ++D A+LRPGR D ++ ++ PD TE L VH + +FD D S + AM Sbjct: 420 MIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTEFLPVHADDLAEFDGDRSACIKAM 478
>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2| Length = 1091 Score = 126 bits (317), Expect = 5e-29 Identities = 77/198 (38%), Positives = 105/198 (53%), Gaps = 6/198 (3%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 M+ ++ V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 248 MQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 307 Query: 180 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 344 A+A+A E V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 308 ARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGL 367 Query: 345 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 524 + TL L MDG + I+V+ ATNR D +D AL RPGRFDR+ Sbjct: 368 APVRSSRQDQIHSSIVSTL---LALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFDRE 424 Query: 525 VSVDVPDVRGRTEILKVH 578 +PD R EILK+H Sbjct: 425 FLFSLPDKEARKEILKIH 442
>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2| Length = 1390 Score = 126 bits (316), Expect = 6e-29 Identities = 77/198 (38%), Positives = 105/198 (53%), Gaps = 6/198 (3%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLL 179 M+ ++ V FD V G+ E+V F L PE F + P+G L GPPGTGKTL+ Sbjct: 417 MQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLV 476 Query: 180 AKAIAGEAG-----VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 344 A+A+A E V FF G++ + +VG ++R LF +A + P I+F DEID + Sbjct: 477 ARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGL 536 Query: 345 XXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQ 524 + TL L MDG + I+V+ ATNR D +D AL RPGRFDR+ Sbjct: 537 APVRSSRQDQIHSSIVSTL---LALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDRE 593 Query: 525 VSVDVPDVRGRTEILKVH 578 +PD R EILK+H Sbjct: 594 FLFSLPDKEARKEILKIH 611
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 125 bits (315), Expect = 8e-29 Identities = 79/194 (40%), Positives = 112/194 (57%), Gaps = 4/194 (2%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLK-KPERFTAVGARIP-KGVLLVGPPGTGKTL 176 ++ T V FDD+AG D AKQ E+V +PE FT G R P +G+LL GPPG GKT+ Sbjct: 333 VDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFT--GLRAPARGLLLFGPPGNGKTM 390 Query: 177 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 356 LAKA+A E+ FF+IS + +VG G VR LF A+E P I+F+DE+D++ Sbjct: 391 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSL---L 447 Query: 357 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVS 530 +D + + L E DG + G+ ++V+ ATNR LD A+LR RF ++V Sbjct: 448 CERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 505 Query: 531 VDVPDVRGRTEILK 572 V +P+ R +LK Sbjct: 506 VSLPNEETRLLLLK 519
>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316| Length = 609 Score = 125 bits (315), Expect = 8e-29 Identities = 85/239 (35%), Positives = 123/239 (51%), Gaps = 30/239 (12%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVE--FLKKPERFTAVGARIPKGVLLVGPPGTGKTL 176 +E V++ D+ G+ + + VE FL K E + R PKGVLL GPPG GKTL Sbjct: 243 LEEVPDVSYQDIGGLTRQIEQIRDAVELPFLHK-ELYREYALRPPKGVLLYGPPGCGKTL 301 Query: 177 LAKAIAG---------------EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA- 308 +AKA+A EA F +I G E + FVG +R +F++A+E A Sbjct: 302 IAKAVANSLAKKMAEVRGDDAREAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKAS 361 Query: 309 ---PCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRAD 479 P IVF DE+D++ +D + QLL+E+DG EG +IV+ A+NR D Sbjct: 362 EGTPVIVFFDEMDSIFRTRGTGVS--SDVETTVVPQLLSEIDGVEGLENVIVIGASNRED 419 Query: 480 ILDSALLRPGRFDRQVSVDVPDVRGR--------TEILKVHGSN-KKFDADVSLEVIAM 629 ++D A+LRPGR D ++ ++ PD TE L VH + +FD D + + AM Sbjct: 420 MIDPAILRPGRLDVKIKIERPDAEAAQDIYSKYLTESLPVHADDLTEFDGDRAACIKAM 478
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 125 bits (314), Expect = 1e-28 Identities = 83/220 (37%), Positives = 125/220 (56%), Gaps = 12/220 (5%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 185 N + +DD+A ++EAK+ E V + P+ F G R P KGVL+VGPPGTGKT+LAK Sbjct: 200 NPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAK 257 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 A+A E G FF++S S + G VR LF+ A+ AP +F+DEID++ Sbjct: 258 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CS 312 Query: 366 XXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRF 515 +DE E + ++LL +MDG G + ++V+AATN +D AL R R Sbjct: 313 RRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RL 370 Query: 516 DRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 ++++ + +P +GR E+LK+ + D D+ LE IA +T Sbjct: 371 EKRIYIPLPTAKGRAELLKISLREVELDPDIHLEDIAEKT 410
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 125 bits (314), Expect = 1e-28 Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 12/220 (5%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 185 N + +DD+A ++EAK+ E V + P+ F G R P KGVL+VGPPGTGKT+LAK Sbjct: 200 NPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAK 257 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 A+A E G FF++S S + G VR LF+ A+ AP +F+DEID++ Sbjct: 258 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CS 312 Query: 366 XXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRF 515 +DE E + ++LL +MDG G + ++V+AATN +D AL R R Sbjct: 313 RRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RL 370 Query: 516 DRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 ++++ + +P +GR E+LK+ + D DV LE IA +T Sbjct: 371 EKRIYIPLPTAKGRAELLKISLREVELDPDVHLEDIADKT 410
>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 125 bits (314), Expect = 1e-28 Identities = 68/210 (32%), Positives = 115/210 (54%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E + +T DDV G ++AK ++ +L+ P+RF P+ VL G PGTGKT+LAK Sbjct: 119 EVKSDITMDDVIGQEDAKIKCRIIMRYLEDPDRFRDWA---PRNVLFHGSPGTGKTMLAK 175 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 ++A E VP + I + + VG GA ++ +L++ A + AP ++F+DE+DA+ Sbjct: 176 SLANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAI--GLDRR 233 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 + + +N LLTEMDG N G++ + ATN ++LD+A+ RF+ ++ +P Sbjct: 234 FQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDNAI--RSRFEEEIEFKLPG 291 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 R +L+ + D D S++ + T Sbjct: 292 DDERRMMLEKYIETMPLDVDFSVDKLVKLT 321
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 124 bits (312), Expect = 2e-28 Identities = 82/217 (37%), Positives = 124/217 (57%), Gaps = 12/217 (5%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 185 N + +DD+A ++EAK+ E V + P+ F G R P KGVL+VGPPGTGKT+LAK Sbjct: 202 NPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAK 259 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 A+A E G FF++S S + G VR LF+ A+ AP +F+DEID++ Sbjct: 260 AVATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSI-----CS 314 Query: 366 XXXXNDERE---QTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRF 515 +DE E + ++LL +MDG G + ++V+AATN +D AL R R Sbjct: 315 RRGTSDEHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RL 372 Query: 516 DRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIA 626 ++++ + +P +GR E+LK++ + D D+ LE IA Sbjct: 373 EKRIYIPLPTAKGRAELLKINLREVELDPDIQLEDIA 409
>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011| Length = 372 Score = 124 bits (311), Expect = 2e-28 Identities = 67/210 (31%), Positives = 114/210 (54%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAK 185 E + +T DDV G ++AK ++++L+ P+RF P+ VL G PGTGKT+LAK Sbjct: 119 EVRSSITMDDVIGQEDAKIKCRIIMKYLEDPDRFRDWA---PRNVLFHGSPGTGKTMLAK 175 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 ++A E VP + I + + VG GA ++ +L++ A + AP ++F+DE+DA+ Sbjct: 176 SLANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAI--GLDRR 233 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 + + +N LLTEMDG N G++ + ATN ++LD A+ RF+ ++ +PD Sbjct: 234 YQSLRGDVSEVVNALLTEMDGINQNWGVVTIGATNNPELLDKAI--RSRFEEEIEFKLPD 291 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 R +L+ + D ++ + T Sbjct: 292 DEERKLMLEKYIETMPLKVDFPVDKLVKLT 321
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 124 bits (311), Expect = 2e-28 Identities = 78/194 (40%), Positives = 112/194 (57%), Gaps = 4/194 (2%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEFLK-KPERFTAVGARIP-KGVLLVGPPGTGKTL 176 ++ T V FDD+AG + AKQ E+V +PE FT G R P +G+LL GPPG GKT+ Sbjct: 331 VDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFT--GLRAPARGLLLFGPPGNGKTM 388 Query: 177 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 356 LAKA+A E+ FF+IS + +VG G VR LF A+E P I+F+DE+D++ Sbjct: 389 LAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSL---L 445 Query: 357 XXXXXXXNDEREQTLNQLLTEMDGFE--GNTGIIVVAATNRADILDSALLRPGRFDRQVS 530 +D + + L E DG + G+ ++V+ ATNR LD A+LR RF ++V Sbjct: 446 CERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVY 503 Query: 531 VDVPDVRGRTEILK 572 V +P+ R +LK Sbjct: 504 VSLPNEETRLLLLK 517
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 120 bits (301), Expect = 3e-27 Identities = 80/214 (37%), Positives = 119/214 (55%), Gaps = 9/214 (4%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 185 N + +DD+A ++EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 200 NPNIRWDDIADLEEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 257 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 A+A E FF+IS S + G VR LF+ A+ AP +F+DEID++ Sbjct: 258 AVATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTS 317 Query: 366 XXXXNDEREQTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRFDRQ 524 R + +LL +MDG G + ++V+AATN +D AL R R +++ Sbjct: 318 EEHEASRRVKA--ELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRR--RLEKR 373 Query: 525 VSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIA 626 + + +P +GR E+L+++ + DV++E IA Sbjct: 374 IYIPLPSAKGREELLRINLKELELADDVNIECIA 407
>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 824 Score = 120 bits (300), Expect = 4e-27 Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 14/194 (7%) Frame = +3 Query: 96 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 269 PE +G + +G+LL GPPGTGKTL+A+ I A P ++G + ++ +VG S Sbjct: 319 PEFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKI-VNGPQILDKYVGESES 377 Query: 270 RVRDLFKKAKEN-APC-------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 425 VR LF A+E C I+ DEIDA+ + + +NQLL++MD Sbjct: 378 NVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSS-VHDTVVNQLLSKMD 436 Query: 426 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSN----KK 593 G E I+V+ TNR D++D ALLRPGR + Q+ V +PD GR +ILK+H + K Sbjct: 437 GVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQILKIHTARMREYNK 496 Query: 594 FDADVSLEVIAMRT 635 D +V LE I+ RT Sbjct: 497 MDPNVDLEDISKRT 510 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = +3 Query: 138 VLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFVGVGASRVRDLFKKAKENAPC 314 V+L G TGKT LA +A + PF IS + V ++ F+ AK + Sbjct: 616 VVLAGAAKTGKTSLAAQMAKSSDFPFVKVISPEDTVGFSESAKCMALKKAFEDAKRSKLS 675 Query: 315 IVFVDEID 338 ++ +D ++ Sbjct: 676 VLLIDNLE 683
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 120 bits (300), Expect = 4e-27 Identities = 75/194 (38%), Positives = 117/194 (60%), Gaps = 3/194 (1%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLL 179 +PN V ++DVAG++ AK+ E V +K P F G R P G+LL GPPGTGK+ L Sbjct: 127 KPN--VKWEDVAGLEGAKEALKEAVILPVKFPHLFK--GNRKPTSGILLYGPPGTGKSYL 182 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA+A EA FFS+S S+ V ++G V+ LF A+EN P I+F+DE+DA+ Sbjct: 183 AKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDAL---TG 239 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNT-GIIVVAATNRADILDSALLRPGRFDRQVSVD 536 ++ + +LL +M+G ++ G++V+ ATN LDSA+ R RF+R++ + Sbjct: 240 TRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RFERRIYIP 297 Query: 537 VPDVRGRTEILKVH 578 +PD+ RT + +++ Sbjct: 298 LPDLAARTTMFEIN 311
>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 119 bits (298), Expect = 8e-27 Identities = 77/210 (36%), Positives = 121/210 (57%), Gaps = 5/210 (2%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 194 V + DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ LAKA+A Sbjct: 131 VKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVA 188 Query: 195 GEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 371 EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ Sbjct: 189 TEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL---CGSRSE 245 Query: 372 XXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 ++ + + L +M G N GI+V+ ATN +LDSA+ R RF++++ + +P+ Sbjct: 246 NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEA 303 Query: 549 RGRTEILKVH-GSNKKFDADVSLEVIAMRT 635 R + ++H GS + + + + +T Sbjct: 304 HARAAMFRLHLGSTQNSLTEADFQELGRKT 333
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 119 bits (297), Expect = 1e-26 Identities = 71/193 (36%), Positives = 116/193 (60%), Gaps = 2/193 (1%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 +PN V +DD+AG++ AK+ E V +K P+ F+ G + G+LL GPPGTGK+ LA Sbjct: 123 KPN--VRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLA 179 Query: 183 KAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXX 362 KA+A EAG FFSIS S+ V ++G VR LF+ A+E P I+F+DEID++ Sbjct: 180 KAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSL---CGS 236 Query: 363 XXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDV 539 ++ + + L +M+G + +G++V+ ATN LDSA+ R RF++++ + + Sbjct: 237 RSEGESESSRRIKTEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPL 294 Query: 540 PDVRGRTEILKVH 578 P+ R + +++ Sbjct: 295 PNAHARARMFELN 307
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 119 bits (297), Expect = 1e-26 Identities = 81/222 (36%), Positives = 122/222 (54%), Gaps = 11/222 (4%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTL 176 ++ GV +DDVAG+ EAK+ E V L PE F G R P KGVL+ GPPGTGKTL Sbjct: 230 LDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTGKTL 287 Query: 177 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 356 LAKA+A E G FF++S + + G VR LF A+ AP +F+DEID++ Sbjct: 288 LAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSR 347 Query: 357 XXXXXXXNDEREQTLNQLLTEMDGFEGNTG---------IIVVAATNRADILDSALLRPG 509 + R + ++LL ++DG NT ++V+AATN +D AL R Sbjct: 348 GGSGEHESSRRVK--SELLVQVDGV-SNTATNEDGSRKIVMVLAATNFPWDIDEALRR-- 402 Query: 510 RFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 R ++++ + +PD R ++ ++ + +DV++E +A RT Sbjct: 403 RLEKRIYIPLPDFESRKALININLRTVEVASDVNIEDVARRT 444
>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)| Length = 444 Score = 118 bits (296), Expect = 1e-26 Identities = 75/190 (39%), Positives = 113/190 (59%), Gaps = 4/190 (2%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 194 V + DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ LAKA+A Sbjct: 131 VKWSDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYLAKAVA 188 Query: 195 GEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 371 EA FFSIS S+ V ++G V++LF+ A+EN P I+F+DEID++ Sbjct: 189 TEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSL---CGSRSE 245 Query: 372 XXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 ++ + + L +M G N GI+V+ ATN +LDSA+ R RF++++ + +P+ Sbjct: 246 NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEP 303 Query: 549 RGRTEILKVH 578 R + K+H Sbjct: 304 HARAAMFKLH 313
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 118 bits (295), Expect = 2e-26 Identities = 76/217 (35%), Positives = 122/217 (56%), Gaps = 9/217 (4%) Frame = +3 Query: 3 MEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTL 176 ++ N V + D+AG+ EAK+ E V L P+ F G R P KGVL+VGPPGTGKT+ Sbjct: 225 VQRNPNVHWADIAGLTEAKRLLEEAVVLPLWMPDYFK--GIRRPWKGVLMVGPPGTGKTM 282 Query: 177 LAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 356 LAKA+A E G FF++S + + G VR LF+ A+ AP +F+DEID++ Sbjct: 283 LAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSI--CS 340 Query: 357 XXXXXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVVAATNRADILDSALLRPGRF 515 ++ + ++LL +MDG G + ++V+AATN +D AL R R Sbjct: 341 KRGTGSEHEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRR--RL 398 Query: 516 DRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIA 626 ++++ + +P++ GR ++L+++ D+ L+ IA Sbjct: 399 EKRIYIPLPEIDGREQLLRINLKEVPLADDIDLKSIA 435
>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) Length = 742 Score = 117 bits (293), Expect = 3e-26 Identities = 70/193 (36%), Positives = 105/193 (54%), Gaps = 13/193 (6%) Frame = +3 Query: 96 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA-GVPFFSISGSEFVEMFVGVGASR 272 P + +G + KG+LL GPPGTGKTL+A+ I G ++G E + FVG Sbjct: 239 PHVTSRLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKN 298 Query: 273 VRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDG 428 VRDLF A+++ ++ DEIDA+ + +NQLLT++DG Sbjct: 299 VRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTG-VHDSIVNQLLTKIDG 357 Query: 429 FEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKK----F 596 E ++++ TNR D+LD ALLRPGR + QV + +PD GR +IL++H + K Sbjct: 358 VEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFL 417 Query: 597 DADVSLEVIAMRT 635 D++L+ +A RT Sbjct: 418 GTDINLQELAART 430 Score = 35.0 bits (79), Expect = 0.19 Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = +3 Query: 141 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSE-FVEMFVGVGASRVRDLFKKAKENAPCI 317 LL GP G+GKT LA I ++ P+ I +E + + + + +F+ A ++ I Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAETMIGLSESTKCAHIVKVFEDAYKSPMSI 593 Query: 318 VFVDEID 338 + +D+I+ Sbjct: 594 IILDDIE 600
>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a| Length = 437 Score = 115 bits (288), Expect = 1e-25 Identities = 74/215 (34%), Positives = 126/215 (58%), Gaps = 5/215 (2%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLL 179 +PN + ++DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ L Sbjct: 121 KPN--IRWNDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYL 176 Query: 180 AKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 356 AKA+A EA FFS+S S+ + ++G V++LF+ A+++ P I+F+DE+D++ Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSL---C 233 Query: 357 XXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 533 ++ + + L +M G N G +V+ ATN +LDSA+ R RF++++ + Sbjct: 234 GSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYI 291 Query: 534 DVPDVRGRTEILKVH-GSNKKFDADVSLEVIAMRT 635 +P+ R ++ ++H GS D ++ +A +T Sbjct: 292 PLPEEAARAQMFRLHLGSTPHNLTDANIHELARKT 326
>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)| (VPS4-1) Length = 437 Score = 115 bits (288), Expect = 1e-25 Identities = 74/215 (34%), Positives = 126/215 (58%), Gaps = 5/215 (2%) Frame = +3 Query: 6 EPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLL 179 +PN + ++DVAG++ AK+ E V +K P FT G R P +G+LL GPPGTGK+ L Sbjct: 121 KPN--IRWNDVAGLEGAKEALKEAVILPIKFPHLFT--GKRTPWRGILLFGPPGTGKSYL 176 Query: 180 AKAIAGEAG-VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX 356 AKA+A EA FFS+S S+ + ++G V++LF+ A+++ P I+F+DE+D++ Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSL---C 233 Query: 357 XXXXXXXNDEREQTLNQLLTEMDGF-EGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 533 ++ + + L +M G N G +V+ ATN +LDSA+ R RF++++ + Sbjct: 234 GSRNENESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYI 291 Query: 534 DVPDVRGRTEILKVH-GSNKKFDADVSLEVIAMRT 635 +P+ R ++ ++H GS D ++ +A +T Sbjct: 292 PLPEEAARAQMFRLHLGSTPHNLTDANIHELARKT 326
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 115 bits (287), Expect = 1e-25 Identities = 79/214 (36%), Positives = 115/214 (53%), Gaps = 9/214 (4%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 185 N V +DD+A + EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 203 NPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 260 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 A+A E FF++S S + G VR LF+ A+ +P +F+DEID++ Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320 Query: 366 XXXXNDEREQTLNQLLTEMDGFEGNTG-------IIVVAATNRADILDSALLRPGRFDRQ 524 R + +LL +MDG G + ++V+AATN +D AL R R +++ Sbjct: 321 EEHEASRRVKA--ELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKR 376 Query: 525 VSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIA 626 + + +P +GR E+L++ + DV L IA Sbjct: 377 IYIPLPSAKGREELLRISLRELELADDVDLASIA 410
>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog| Length = 792 Score = 111 bits (278), Expect = 2e-24 Identities = 77/225 (34%), Positives = 112/225 (49%), Gaps = 19/225 (8%) Frame = +3 Query: 18 GVTFDDVAGVDEAKQDFMEV-----VEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLA 182 G F+D+ G+ +F + L P +G KG+LL GPPGTGKTL+A Sbjct: 263 GFKFEDM-GIGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIA 321 Query: 183 KAIAG--EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK--------ENAPCIVFVDE 332 + I A P ++G E + +VG VR LF A+ E+ I+ DE Sbjct: 322 RQIGKMLNAREPKI-VNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDE 380 Query: 333 IDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGR 512 +DA+ +Q +NQLL +MDG + I+V+ TNR D++D ALLRPGR Sbjct: 381 LDAICKKRGSSGGDTG-VGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGR 439 Query: 513 FDRQVSVDVPDVRGRTEILKVH----GSNKKFDADVSLEVIAMRT 635 + + + +PD GR +ILK+H SN + DV +E +A T Sbjct: 440 LEVHMEISLPDEHGRLQILKIHTSRMASNGILENDVDMEELASLT 484 Score = 40.8 bits (94), Expect = 0.003 Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 4/186 (2%) Frame = +3 Query: 78 VEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFV 254 V+ +K ER V VLL GP +GKT LA IA + PF +S V M Sbjct: 574 VQQVKNSERTRLVS------VLLSGPIASGKTALAATIALGSEFPFVKLVSAESMVGMNE 627 Query: 255 GVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE 434 + V +F+ + ++ ++ VDEI+ + N TL Q L + + Sbjct: 628 NARVAHVNRVFEDSYKSPLSVIVVDEIERIIDWVPIGPRFSN-----TLLQTLMVLFKKQ 682 Query: 435 GNTG--IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKF-DAD 605 G ++++A T+ +L S + FD +++ VP+V TE+ ++ S F D++ Sbjct: 683 PPKGHRLLILATTSERTML-SRMDMTQSFDAEIA--VPNVSNVTELDRIIQSIDSFADSN 739 Query: 606 VSLEVI 623 V + + Sbjct: 740 VRADTL 745
>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18| Length = 794 Score = 111 bits (278), Expect = 2e-24 Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 15/215 (6%) Frame = +3 Query: 36 VAGVDEAKQDFMEVV--EFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA-G 206 + G+D QD + PE + + KG+LL GPPGTGKTL+A+ ++ G Sbjct: 277 IGGLDAEFQDIFRRAFNSRILPPELAEKLDYKHCKGLLLYGPPGTGKTLIARKLSKMLNG 336 Query: 207 VPFFSISGSEFVEMFVGVGASRVRDLFK--------KAKENAPCIVFVDEIDAVXXXXXX 362 ++G E + +VG +R+LFK K +++ ++ DE+D+V Sbjct: 337 KEPKIVNGPEMLSKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQRGS 396 Query: 363 XXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVP 542 + +NQLL++MDG + I+V+ TNR D++D+ALLRPGRF+ Q+ + +P Sbjct: 397 GKSDGTGVGDNVVNQLLSKMDGVDQLNNILVIGMTNRLDLIDTALLRPGRFEIQIEISLP 456 Query: 543 DVRGRTEILKVH----GSNKKFDADVSLEVIAMRT 635 D +GR +I +H N +DV+ + ++ T Sbjct: 457 DEKGRKDIFLIHTKKLTENGILSSDVNFDELSTLT 491 Score = 38.9 bits (89), Expect = 0.013 Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 4/75 (5%) Frame = +3 Query: 132 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASR----VRDLFKKAK 299 + +LL GPPG GKT +A +A + PF + + E VG+G R + ++F+ Sbjct: 594 RSILLYGPPGVGKTSIATTLALNSDFPFIKMLSA---ETLVGMGELRKIQEIDNVFRDVH 650 Query: 300 ENAPCIVFVDEIDAV 344 ++ ++ +D+I+ + Sbjct: 651 KSPLNVLVIDKIENI 665
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 111 bits (278), Expect = 2e-24 Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 9/214 (4%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 185 N V + D+A + EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 203 NPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 260 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 A+A E FF++S S + G VR LF+ A+ +P +F+DEID++ Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320 Query: 366 XXXXNDEREQTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRFDRQ 524 R + +LL +MDG G + ++V+AATN +D AL R R +++ Sbjct: 321 EEHEASRRVKA--ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKR 376 Query: 525 VSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIA 626 + + +P +GR E+L++ + DV+L IA Sbjct: 377 IYIPLPSAKGREELLRISLRELELADDVNLASIA 410
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 111 bits (278), Expect = 2e-24 Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 9/214 (4%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAK 185 N V + D+A + EAK+ E V + PE F G R P KGVL+VGPPGTGKTLLAK Sbjct: 203 NPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPGTGKTLLAK 260 Query: 186 AIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXX 365 A+A E FF++S S + G VR LF+ A+ +P +F+DEID++ Sbjct: 261 AVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTS 320 Query: 366 XXXXNDEREQTLNQLLTEMDGFEG-------NTGIIVVAATNRADILDSALLRPGRFDRQ 524 R + +LL +MDG G + ++V+AATN +D AL R R +++ Sbjct: 321 EEHEASRRMKA--ELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKR 376 Query: 525 VSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIA 626 + + +P +GR E+L++ + DV+L IA Sbjct: 377 IYIPLPSAKGREELLRISLRELELADDVNLASIA 410
>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) (SKD2 protein) Length = 744 Score = 110 bits (276), Expect = 3e-24 Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 17/197 (8%) Frame = +3 Query: 96 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGV 260 PE +G + KG+LL GPPG GKTLLA+ I A E V ++G E + +VG Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGE 297 Query: 261 GASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLT 416 + +R LF A+E + I+ DEIDA+ + +NQLL+ Sbjct: 298 SEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLS 356 Query: 417 EMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKK- 593 ++DG E I+V+ TNR D++D ALLRPGR + ++ + +PD +GR +IL +H + + Sbjct: 357 KIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRG 416 Query: 594 ---FDADVSLEVIAMRT 635 ADV ++ +A+ T Sbjct: 417 HQLLSADVDIKELAVET 433 Score = 37.7 bits (86), Expect = 0.029 Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Frame = +3 Query: 138 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 314 VLL GPP +GKT +A IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTAVAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 315 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 485 V VD+I+ + N + L +L + +G ++++ T+R D+L Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALL--VLLKKAPPQGRK-LLIIGTTSRKDVL 652
>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 110 bits (276), Expect = 3e-24 Identities = 69/197 (35%), Positives = 106/197 (53%), Gaps = 17/197 (8%) Frame = +3 Query: 96 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----AGEAGVPFFSISGSEFVEMFVGV 260 PE +G + KG+LL GPPG GKTLLA+ I A E V ++G E + +VG Sbjct: 242 PEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKV----VNGPEILNKYVGE 297 Query: 261 GASRVRDLFKKAKE--------NAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLT 416 + +R LF A+E + I+ DEIDA+ + +NQLL+ Sbjct: 298 SEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTG-VHDTVVNQLLS 356 Query: 417 EMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKK- 593 ++DG E I+V+ TNR D++D ALLRPGR + ++ + +PD +GR +IL +H + + Sbjct: 357 KIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRG 416 Query: 594 ---FDADVSLEVIAMRT 635 ADV ++ +A+ T Sbjct: 417 HQLLSADVDIKELAVET 433 Score = 38.9 bits (89), Expect = 0.013 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Frame = +3 Query: 138 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 314 VLL GPP +GKT LA IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 315 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 485 V VD+I+ + N + L +L + +G ++++ T+R D+L Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALL--VLLKKAPPQGRK-LLIIGTTSRKDVL 652
>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive| fusion protein 2) (NEM-sensitive fusion protein 2) (dNsf-2) Length = 752 Score = 109 bits (273), Expect = 6e-24 Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 14/194 (7%) Frame = +3 Query: 96 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 269 PE +G + KG+LL GPPGTGKTL+A+ I A P ++G + ++ +VG + Sbjct: 247 PELVEQLGIKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEA 305 Query: 270 RVRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 425 +R LF +A+E I+ DEIDA+ + +NQLL ++D Sbjct: 306 NIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSG-VHDTVVNQLLAKID 364 Query: 426 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSN----KK 593 G E I+V+ TNR D++D ALLRPGR + Q+ + +P+ +GR +IL +H K Sbjct: 365 GVEQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMRDFNK 424 Query: 594 FDADVSLEVIAMRT 635 +DV IA +T Sbjct: 425 IASDVDNNEIAAKT 438 Score = 30.4 bits (67), Expect = 4.6 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 1/99 (1%) Frame = +3 Query: 45 VDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSI 224 V E +D M V+ K E V VL+ G P +GK+ LA +A + PF + Sbjct: 519 VTELLEDGMLSVQQAKATESSGLVS------VLIEGAPNSGKSALAANLAQLSDFPFVKV 572 Query: 225 -SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 338 S + V +R +F A + + VD ++ Sbjct: 573 CSPEDMVGFTESAKCLHIRKIFDDAYRSTLSCIVVDNVE 611
>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18| Length = 758 Score = 109 bits (273), Expect = 6e-24 Identities = 70/194 (36%), Positives = 102/194 (52%), Gaps = 14/194 (7%) Frame = +3 Query: 96 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 269 P +G KG+LL GPPGTGKTL+A+ I A P ++G E + +VG Sbjct: 263 PSVIEKLGISHVKGLLLYGPPGTGKTLIARKIGTMLNAKEPKI-VNGPEILSKYVGSSEE 321 Query: 270 RVRDLFK--------KAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 425 +R+LFK K +E++ I+ DE+D+V + +NQLL +MD Sbjct: 322 NIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTG-VGDNVVNQLLAKMD 380 Query: 426 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH----GSNKK 593 G + I+V+ TNR D++DSALLRPGRF+ QV + +PD +GR +I + N Sbjct: 381 GVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNM 440 Query: 594 FDADVSLEVIAMRT 635 DV+L +A T Sbjct: 441 MSDDVNLAELAALT 454 Score = 36.6 bits (83), Expect = 0.064 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%) Frame = +3 Query: 138 VLLVGPPGTGKTLLAKAIAGEAGVPFFS-ISGSEFVEMFVGVGASRVRDLFKKAKENAPC 314 +L+ GP G+GKT LA IA ++G PF IS +E M + + + F+ A ++ Sbjct: 560 LLIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAKIAYIDNTFRDAYKSPLN 619 Query: 315 IVFVDEIDAV 344 I+ +D ++ + Sbjct: 620 ILVIDSLETL 629
>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive| fusion protein 1) (NEM-sensitive fusion protein 1) (dNsf-1) (Protein comatose) Length = 745 Score = 109 bits (273), Expect = 6e-24 Identities = 69/194 (35%), Positives = 104/194 (53%), Gaps = 14/194 (7%) Frame = +3 Query: 96 PERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAG--EAGVPFFSISGSEFVEMFVGVGAS 269 PE +G + KG+LL GPPGTGKTL+A+ I A P ++G + ++ +VG + Sbjct: 242 PELVEQLGCKHVKGILLYGPPGTGKTLMARQIGTMLNAREPKI-VNGPQILDKYVGESEA 300 Query: 270 RVRDLFKKAKENAPC--------IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 425 VR LF +A+E I+ DEIDA+ + +NQLLT++D Sbjct: 301 NVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSG-VHDTVVNQLLTKID 359 Query: 426 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSN----KK 593 G + I+V+ TNR D++D ALLRPGR + Q+ + +P+ +GR +IL +H K Sbjct: 360 GVDQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQILNIHTKRMREFNK 419 Query: 594 FDADVSLEVIAMRT 635 + DV + IA T Sbjct: 420 INDDVDNKEIAALT 433 Score = 35.0 bits (79), Expect = 0.19 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 1/101 (0%) Frame = +3 Query: 39 AGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 218 A V +D M V+ K PE V VL+ G P +GKT LA +A + PF Sbjct: 512 APVSNLLEDGMLYVQQAKAPESSGLVS------VLVAGAPNSGKTALAAQLAKMSDFPFV 565 Query: 219 SI-SGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 338 + S + V +R +F A + + VD ++ Sbjct: 566 KVCSPEDMVGYTESAKCLHIRKIFDDAYRSMLSCIVVDNVE 606
>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 381 Score = 109 bits (272), Expect = 8e-24 Identities = 54/86 (62%), Positives = 63/86 (73%) Frame = +3 Query: 378 NDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGR 557 +DEREQTLNQ+L EMDGF GN G+IV+AATNR D+LD AL RPGRFDRQV V +PDV+GR Sbjct: 13 HDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKGR 72 Query: 558 TEILKVHGSNKKFDADVSLEVIAMRT 635 +ILKVH DV +A T Sbjct: 73 EQILKVHMRKVSVAQDVDAMTLARGT 98
>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion| protein NSF) (N-ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein) Length = 744 Score = 109 bits (272), Expect = 8e-24 Identities = 74/219 (33%), Positives = 114/219 (52%), Gaps = 19/219 (8%) Frame = +3 Query: 36 VAGVDEAKQD-FMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAI-----A 194 + G+D+ D F F + PE +G KG+LL GPPG GKTLLA+ I A Sbjct: 220 IGGLDKEFSDIFRRAFAFRVFPPEIVEQMGCIHVKGILLYGPPGCGKTLLARQIGKMLNA 279 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE--------NAPCIVFVDEIDAVXX 350 E V ++G E + +VG + +R LF A+E + I+ DEIDA+ Sbjct: 280 REPKV----VNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICK 335 Query: 351 XXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVS 530 + +NQLL+++DG E I+V+ TNR D++D ALLRPGR + ++ Sbjct: 336 QRGSMAGSTG-VHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKME 394 Query: 531 VDVPDVRGRTEILKVHGSNKK----FDADVSLEVIAMRT 635 + +PD +GR +IL +H + + ADV ++ +A+ T Sbjct: 395 IGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVET 433 Score = 38.9 bits (89), Expect = 0.013 Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%) Frame = +3 Query: 138 VLLVGPPGTGKTLLAKAIAGEAGVPFFSI-SGSEFVEMFVGVGASRVRDLFKKAKENAPC 314 VLL GPP +GKT LA IA E+ PF I S + + ++ +F A ++ Sbjct: 539 VLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLS 598 Query: 315 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADIL 485 V VD+I+ + N + L +L + +G ++++ T+R D+L Sbjct: 599 CVVVDDIERLLDYVPIGPRFSNLVLQALL--VLLKKAPPQGRK-LLIIGTTSRKDVL 652
>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B| Length = 362 Score = 108 bits (269), Expect = 2e-23 Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 5/210 (2%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI---PKGVLLVGPPGTGKTLLAKAI 191 +T+ D+AG+DE + + V L +R G+R+ PKGVLL GPPG GKTL+AKA Sbjct: 92 ITWHDIAGLDEVITELKDTV-ILPIQKRHLFEGSRLLQPPKGVLLYGPPGCGKTLIAKAT 150 Query: 192 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 371 A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 151 AKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLRNRSS 207 Query: 372 XXNDEREQTLNQLLTEMDGFEG--NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 ++ Q ++ DG + N +I++ ATNR LDSA+LR R + ++ P+ Sbjct: 208 SDHEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILR--RMPTRFHINQPN 265 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 VR R +ILK+ N+ ++ V L IA +T Sbjct: 266 VRQRKDILKLILENENVESAVELSEIAKQT 295
>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)| Length = 362 Score = 107 bits (267), Expect = 3e-23 Identities = 75/209 (35%), Positives = 110/209 (52%), Gaps = 4/209 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFT-AVGARIPKGVLLVGPPGTGKTLLAKAIA 194 +TF D+ G+D D E V + L PE ++ + + P GVLL GPPG GKT+LAKA+A Sbjct: 88 ITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKALA 147 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 374 E+G F SI S ++ + G V +F A + PCI+F+DEID+ Sbjct: 148 KESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDS----FLRERSS 203 Query: 375 XNDEREQTLN-QLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 551 + E TL + +T DG N ++++ ATNR + +D A LR R ++ V +P Sbjct: 204 TDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSD 261 Query: 552 GRTEILKVHGSNKKFDAD-VSLEVIAMRT 635 R +IL V + K D D L++IA T Sbjct: 262 QRYKILSVLLKDTKLDEDEFDLQLIADNT 290
>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)| (Katanin ATPase-containing subunit) Length = 472 Score = 103 bits (257), Expect = 4e-22 Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 5/210 (2%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 194 ++ DD+ G+ + KQ E V L PE F G R P K ++L GPPGTGKTL+A+AIA Sbjct: 190 MSLDDIIGMHDVKQVLHEAVTLPLLVPEFFQ--GLRSPWKAMVLAGPPGTGKTLIARAIA 247 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 374 E+ FF++S ++ + G VR LF+ A+ AP I+F+DEID + Sbjct: 248 SESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTL--GGQRGNSG 305 Query: 375 XNDEREQTLNQLLTEMDGFEG---NTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 ++ + ++ L +MDG + + + V+AATN LD AL R RF++++ + +PD Sbjct: 306 EHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRR--RFEKRIFIPLPD 363 Query: 546 VRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 + R ++++ +++ + +A RT Sbjct: 364 IDARKKLIEKSMEGTPKSDEINYDDLAART 393
>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)| Length = 754 Score = 101 bits (251), Expect = 2e-21 Identities = 72/220 (32%), Positives = 110/220 (50%), Gaps = 15/220 (6%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 194 V ++D+AG+ AK E V + +P+ F G R P +G+LL GPPGTGKT++AKA+A Sbjct: 468 VYWEDIAGLRNAKNSLKEAVVYPFLRPDLFK--GLREPVRGMLLFGPPGTGKTMIAKAVA 525 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 374 E+ FFS+S S + ++G VR LF AK+ +P I+F+DEID++ Sbjct: 526 TESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSM---LTARSDN 582 Query: 375 XNDEREQTLNQLLTEMDGFEGNTG------------IIVVAATNRADILDSALLRPGRFD 518 N+ + +LL + T ++V+ ATN +D A R RF Sbjct: 583 ENESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RFS 640 Query: 519 RQVSVDVPDVRGRTEILK-VHGSNKKFDADVSLEVIAMRT 635 R++ + +PD R LK + K D+ E+I T Sbjct: 641 RKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMT 680
>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1| Length = 361 Score = 100 bits (250), Expect = 3e-21 Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 6/214 (2%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 179 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLR 199 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSV 533 ++ Q ++ DG + + +IV+ ATNR LDSA++R R + + Sbjct: 200 NRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHI 257 Query: 534 DVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 + P ++ R ILK+ N+ D V L +A T Sbjct: 258 NQPALKQREAILKLILKNENVDRHVDLLEVAQET 291
>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1| Length = 361 Score = 100 bits (250), Expect = 3e-21 Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 6/214 (2%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 179 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLR 199 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSV 533 ++ Q ++ DG + + +IV+ ATNR LDSA++R R + + Sbjct: 200 NRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHI 257 Query: 534 DVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 + P ++ R ILK+ N+ D V L +A T Sbjct: 258 NQPALKQREAILKLILKNENVDRHVDLLEVAQET 291
>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1| Length = 361 Score = 100 bits (250), Expect = 3e-21 Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 6/214 (2%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARI---PKGVLLVGPPGTGKTLL 179 N VT+ D+AG+D+ D + V +KK F +R+ PKGVLL GPPG GKTL+ Sbjct: 85 NMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFE--NSRLLQPPKGVLLYGPPGCGKTLI 142 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA A EAG F ++ S + + G +F A + P I+F+DEID+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDS---FLR 199 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGNTG--IIVVAATNRADILDSALLRPGRFDRQVSV 533 ++ Q ++ DG + + +IV+ ATNR LDSA++R R + + Sbjct: 200 NRSSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHI 257 Query: 534 DVPDVRGRTEILKVHGSNKKFDADVSLEVIAMRT 635 + P ++ R ILK+ N+ D V L +A T Sbjct: 258 NQPALKQREAILKLILKNENVDRHVDLLEVAQET 291
>SAP1_YEAST (P39955) Protein SAP1| Length = 897 Score = 99.4 bits (246), Expect = 8e-21 Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 22/201 (10%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIP-KGVLLVGPPGTGKTLLAKAIA 194 V +DD+AG++ AK E V + +P+ F G R P +G+LL GPPGTGKT+LA+A+A Sbjct: 602 VHWDDIAGLESAKYSLKEAVVYPFLRPDLFR--GLREPVRGMLLFGPPGTGKTMLARAVA 659 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 374 E+ FFSIS S ++G VR LF AK+ +P I+FVDEID++ Sbjct: 660 TESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSI--MGSRNNEN 717 Query: 375 XNDEREQTLNQLL--------------------TEMDGFEGNTGIIVVAATNRADILDSA 494 N+ + N+ L ++ +G E +T ++V+AATN +D A Sbjct: 718 ENESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEA 777 Query: 495 LLRPGRFDRQVSVDVPDVRGR 557 R RF R+ + +P+ + R Sbjct: 778 ARR--RFVRRQYIPLPEDQTR 796
>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A| Length = 380 Score = 99.0 bits (245), Expect = 1e-20 Identities = 68/208 (32%), Positives = 106/208 (50%), Gaps = 3/208 (1%) Frame = +3 Query: 21 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARI---PKGVLLVGPPGTGKTLLAKAI 191 VT+ DVAG+DE + + V L +R G+++ PKGVLL GPPG GKTL+AKA Sbjct: 91 VTWRDVAGLDEIISEMQDTV-ILPFQKRHLFSGSKLLQPPKGVLLYGPPGCGKTLIAKAT 149 Query: 192 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXX 371 A +G F ++ S + + G +F A + PCI+F+DEID+ Sbjct: 150 AKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDH 209 Query: 372 XXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVR 551 + L +D E N+ ++V+ ATNR +D+A+LR R V +P+ Sbjct: 210 EATAMMKAQFMSLWDGLDTGE-NSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAA 266 Query: 552 GRTEILKVHGSNKKFDADVSLEVIAMRT 635 R EIL++ S + ++L+ IA ++ Sbjct: 267 QREEILRLILSGENLSNAINLKEIASQS 294
>MSP1_CAEEL (P54815) Protein MSP1 homolog| Length = 342 Score = 98.6 bits (244), Expect = 1e-20 Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 5/210 (2%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAV-GARI---PKGVLLVGPPGTGKTLL 179 + G +D++ G +E E+ + + P RF + G+ + P+G+LL GPPG GKTLL Sbjct: 77 DVGADWDEIGGCEEL---VAELKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLL 133 Query: 180 AKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXX 359 AKA+A AG F ++ S + + G +F A++ P I+F+DEID+ Sbjct: 134 AKAVARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDS---FLR 190 Query: 360 XXXXXXNDEREQTLNQLLTEMDGFEGN-TGIIVVAATNRADILDSALLRPGRFDRQVSVD 536 ++ Q +T DGF + IIV+ ATNR +D+A+LR R + V Sbjct: 191 DRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMGATNRPRDVDAAILR--RMTARFQVP 248 Query: 537 VPDVRGRTEILKVHGSNKKFDADVSLEVIA 626 VP+ + R++IL V N+K + V+L IA Sbjct: 249 VPNAKQRSQILNVILRNEKINNTVNLGEIA 278
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 97.4 bits (241), Expect = 3e-20 Identities = 63/190 (33%), Positives = 91/190 (47%), Gaps = 1/190 (0%) Frame = +3 Query: 12 NTGVTFDDVAGVDEAKQDF-MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKA 188 N D+ G++E K F K+ E + G IPKG+LLVG GTGK+L AK+ Sbjct: 238 NPVTKISDIGGLNELKSWLKFRAASFSKRAEEY---GLPIPKGLLLVGIQGTGKSLTAKS 294 Query: 189 IAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX 368 IA E +P + +G +RVR + + A+ +PCI+++DEID Sbjct: 295 IANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNN 354 Query: 369 XXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDV 548 +R +T + E + + VVA N D L LLR GRFD + +PD+ Sbjct: 355 DSGTTKR--VFGTFITWLS--EKKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDL 410 Query: 549 RGRTEILKVH 578 + R I KVH Sbjct: 411 KERECIFKVH 420
>FTSH_CHLVU (P56369) Cell division protein ftsH homolog| Length = 1720 Score = 92.8 bits (229), Expect = 8e-19 Identities = 52/136 (38%), Positives = 77/136 (56%) Frame = +3 Query: 27 FDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAG 206 F D+ G+ + + E+V FL+ R +P G+LL GPPGTGKTLL +A+AGEA Sbjct: 973 FTDIVGIQKVLLELYEIVLFLRNSGRNFTHSETLPHGILLTGPPGTGKTLLVQALAGEAQ 1032 Query: 207 VPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDE 386 VP +SGS +E A +++ +F++A++ APCIVF+DEID + + + Sbjct: 1033 VPVIVLSGSSLMEPGES-AAFKLQLVFQEARQLAPCIVFIDEIDTL-----------SSK 1080 Query: 387 REQTLNQLLTEMDGFE 434 R Q L + GFE Sbjct: 1081 RSQLLQNPMANDPGFE 1096 Score = 76.3 bits (186), Expect = 7e-14 Identities = 43/125 (34%), Positives = 63/125 (50%) Frame = +3 Query: 261 GASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN 440 GA + D FKK K+N N+++ L+QLL E+DG +G Sbjct: 1125 GAKKEFDNFKKQKKNP----------------AEYNSKQNEKQVSLLSQLLIELDGIQGR 1168 Query: 441 TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEV 620 G+++ ATNR ++LD ALLRPGRFD+ V V +P + R EIL+ +G + + Sbjct: 1169 NGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFYGQTLGYQKTMPWAY 1228 Query: 621 IAMRT 635 RT Sbjct: 1229 FGERT 1233
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 91.3 bits (225), Expect = 2e-18 Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 9/191 (4%) Frame = +3 Query: 33 DVAGVDEAKQDFMEVVEFLKKPERFTAV-----GARIPKGVLLVGPPGTGKTLLAKAIAG 197 ++ GVD K ++LKK + + G P+G+LL+G GTGK+L AKAIA Sbjct: 229 NIGGVDNLK-------DWLKKRKTSFTIQASNYGLPTPRGLLLIGIQGTGKSLTAKAIAT 281 Query: 198 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXX 377 E +P + VG SR+R + A+ +PCI+++DE+D Sbjct: 282 EWQLPLLKLDVGRLFGGIVGESESRLRQMIDVAETLSPCILWIDEMD--------KAFSN 333 Query: 378 NDER--EQTLNQLLTEMDGF--EGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPD 545 ND R T N++L + E + VVA N D+L ++R GRFD +D+P+ Sbjct: 334 NDSRGDSGTSNRVLATFISWLSEKTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDLPE 393 Query: 546 VRGRTEILKVH 578 + R EI K+H Sbjct: 394 LEERKEIFKIH 404
>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)| Length = 491 Score = 85.5 bits (210), Expect = 1e-16 Identities = 60/188 (31%), Positives = 89/188 (47%), Gaps = 5/188 (2%) Frame = +3 Query: 30 DDVAGVDEAKQDFMEVVEFLKKPERFTA-----VGARIPKGVLLVGPPGTGKTLLAKAIA 194 +D+ G+D K +LKK R + G PKG+LLVG GTGK+L AKAIA Sbjct: 228 EDIGGLDALKS-------WLKKRSRSFSKQSFNYGIPTPKGLLLVGIQGTGKSLTAKAIA 280 Query: 195 GEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXX 374 + +P + + VG SR+R++ A+ +PC++++DEID Sbjct: 281 NDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEIDKAFSNLYSQGDS 340 Query: 375 XNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRG 554 R +T + E T + VVA N L S +LR GRFD +D+P+ Sbjct: 341 GTSAR--VFGTFITWLS--EKTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNNEE 396 Query: 555 RTEILKVH 578 R I ++H Sbjct: 397 RELIFQIH 404
>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL| Length = 330 Score = 78.2 bits (191), Expect = 2e-14 Identities = 50/171 (29%), Positives = 85/171 (49%) Frame = +3 Query: 75 VVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFV 254 +V+ ++ + G ++ +L GPPG GKTL A+ A E G+P F + + ++ Sbjct: 100 LVKEFRRADEIRQHGLKVRSKMLFCGPPGCGKTLCAEIFAAELGLPLFRVKLDRLISSYL 159 Query: 255 GVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFE 434 G A+ +R F+ A++ PC++F DE DA+ ++E + +N LL +D + Sbjct: 160 GETATNIRKTFEFARKQ-PCVLFFDEFDAL--ARTRDDSGEHNELRRVVNSLLLFIDNMQ 216 Query: 435 GNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSN 587 ++AATN LD+A+ R RFD + D P+ LK+ N Sbjct: 217 PKG--FLIAATNLDRSLDAAIWR--RFDEVLWFDRPEAAMIGRFLKLKFKN 263
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1| Length = 456 Score = 63.2 bits (152), Expect = 6e-10 Identities = 48/165 (29%), Positives = 77/165 (46%) Frame = +3 Query: 39 AGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 218 +G+ E D +V +F+K + ++ G +G LL GPPG+GKT +A+AGE Sbjct: 232 SGIKEGILD--DVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNIC 289 Query: 219 SISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQT 398 ++ SE + R+ L E + I+ +++IDA T Sbjct: 290 ILNLSE-----NNLTDDRLNHLMNNMPERS--ILLLEDIDA-AFNKRSQTGEQGFHSSVT 341 Query: 399 LNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 533 + LL +DG + I TN + LD+A++RPGR D +V V Sbjct: 342 FSGLLNALDGVTSSEETITFMTTNHPEKLDAAIMRPGRIDYKVFV 386
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like protein) (H-BCS1)| Length = 419 Score = 63.2 bits (152), Expect = 6e-10 Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 7/156 (4%) Frame = +3 Query: 72 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA--GVPFFSISGSEFVE 245 +V EF+ P+ +T G +G LL GPPG GK+ A+AGE + S++ S + Sbjct: 204 DVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD 263 Query: 246 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQ-----TLNQL 410 R+ L A + + +V ++++DA N + Q T + L Sbjct: 264 -------DRLNHLLSVAPQQS--LVLLEDVDA--AFLSRDLAVENPVKYQGLGRLTFSGL 312 Query: 411 LTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 518 L +DG IV TN D LD AL+RPGR D Sbjct: 313 LNALDGVASTEARIVFMTTNHVDRLDPALIRPGRVD 348
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 420 Score = 62.4 bits (150), Expect = 1e-09 Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 4/164 (2%) Frame = +3 Query: 39 AGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFF 218 +GV E D +V EF+ P+ +T G +G LL GPPG GK+ A+AGE G Sbjct: 195 SGVAERIVD--DVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSIC 252 Query: 219 SISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXX----XXXXXXXNDE 386 +S S+ + R+ L A + + I+ ++++DA Sbjct: 253 LMSLSD-----RSLSDDRLNHLLSVAPQQS--IILLEDVDAAFVSRELLPTENPLAYQGM 305 Query: 387 REQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 518 T + LL +DG + IV TN + LD AL+RPGR D Sbjct: 306 GRLTFSGLLNALDGVASSEARIVFMTTNFIERLDPALVRPGRVD 349
>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)| Length = 69 Score = 60.8 bits (146), Expect = 3e-09 Identities = 27/62 (43%), Positives = 41/62 (66%) Frame = +3 Query: 447 IIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDADVSLEVIA 626 ++V+A TNR D+LD AL+RPGRF RQ+ P ++GR+ I KVH K D ++ + +A Sbjct: 1 VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLA 60 Query: 627 MR 632 + Sbjct: 61 RK 62
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 419 Score = 60.5 bits (145), Expect = 4e-09 Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 5/154 (3%) Frame = +3 Query: 72 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA--GVPFFSISGSEFVE 245 +V F++ P+ ++ G +G LL GPPG GK+ A+AGE + S+S S + Sbjct: 204 DVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSD 263 Query: 246 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXX---XXXNDEREQTLNQLLT 416 R+ L A + + I+ ++++DA T + LL Sbjct: 264 -------DRLNHLLSVAPQQS--IILLEDVDAAFVSRDLNKQNPTAYQGMGRLTFSGLLN 314 Query: 417 EMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 518 +DG IV TN D LD AL+RPGR D Sbjct: 315 ALDGVASTEARIVFMTTNHIDRLDPALIRPGRVD 348
>YCF2_ANTFO (Q859W7) Protein ycf2| Length = 2392 Score = 60.1 bits (144), Expect = 5e-09 Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 17/172 (9%) Frame = +3 Query: 132 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV--------EMFVGV---GASRVR 278 KG+LLVGP GK+ L K +A ++ VP IS S+ + E ++ + R+ Sbjct: 1652 KGILLVGPTEIGKSYLIKNLAADSYVPLIKISISKLLYNKPDVITESWINILMESLQRLT 1711 Query: 279 DLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQT------LNQLLTEMDGFEGN 440 + + AK+ +PCI+++ +I + N E + T L TE + Sbjct: 1712 LILELAKKMSPCIIWIQDIHEL----NVNRSTENVESDPTFLLGILLKYFHTEFIS-KST 1766 Query: 441 TGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKF 596 GII++ +T+ +D AL+ P R D+ +++ + D+ R E + +K+F Sbjct: 1767 KGIIIIGSTHLPRKVDPALISPNRLDKLMNIRIIDIFERQEKFSILLHSKRF 1818
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 449 Score = 58.5 bits (140), Expect = 2e-08 Identities = 42/149 (28%), Positives = 67/149 (44%) Frame = +3 Query: 72 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 251 +V +FL+ + + G +G LL GPPG+GKT A+AGE ++ +E Sbjct: 223 DVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAE----- 277 Query: 252 VGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGF 431 G+ R+ L A +V ++++D+ T + LL +DG Sbjct: 278 KGLTDDRLNHLLSNVPPKA--VVLLEDVDS-AFQGRERSGEVGFHANVTFSGLLNALDGV 334 Query: 432 EGNTGIIVVAATNRADILDSALLRPGRFD 518 + I+ TN + LD AL+RPGR D Sbjct: 335 TSSDERIIFMTTNHPEKLDPALVRPGRVD 363
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like protein)| Length = 418 Score = 58.5 bits (140), Expect = 2e-08 Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 7/156 (4%) Frame = +3 Query: 72 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA--GVPFFSISGSEFVE 245 ++ EF+ P+ + G +G LL GPPG GK+ A+AGE + S++ S + Sbjct: 204 DIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSD 263 Query: 246 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQ-----TLNQL 410 R+ L A + + +V ++++DA N + Q T + L Sbjct: 264 -------DRLNHLLSVAPQQS--LVLLEDVDA--AFLSRDLAVENPIKYQGLGRLTFSGL 312 Query: 411 LTEMDGFEGNTGIIVVAATNRADILDSALLRPGRFD 518 L +DG IV TN D LD AL+RPGR D Sbjct: 313 LNALDGVASTEARIVFMTTNYIDRLDPALIRPGRVD 348
>ATD3B_HUMAN (Q5T9A4) ATPase family AAA domain-containing protein 3B| Length = 648 Score = 56.2 bits (134), Expect = 8e-08 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 1/151 (0%) Frame = +3 Query: 138 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK-ENAPC 314 +LL GPPGTGKTL AK +A +G+ + ++G + M G + + LF A Sbjct: 348 ILLYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHKLFDWANTSRRGL 406 Query: 315 IVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVVAATNRADILDSA 494 ++F+DE DA + + TLN L M + + ++V A+N + D A Sbjct: 407 LLFMDEADA--FLRKRATEEISKDLRATLNAFLYHMG--QHSNKFMLVLASNLPEQFDCA 462 Query: 495 LLRPGRFDRQVSVDVPDVRGRTEILKVHGSN 587 + R D V D+P R ++++H N Sbjct: 463 I--NSRIDVMVHFDLPQQEERERLVRLHFDN 491
>YCF2_PINTH (P41653) Protein ycf2| Length = 2054 Score = 56.2 bits (134), Expect = 8e-08 Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 22/161 (13%) Frame = +3 Query: 117 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSIS-----------------GSEFVE 245 G+ + KG+LL+GP GTG++ L K++A ++ VP IS +EF + Sbjct: 1366 GSLLSKGILLIGPMGTGRSYLVKSLAADSYVPLIRISLKKLWYGEYLDYPLERIPTEF-D 1424 Query: 246 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 425 FV + AK +PCI+++ I + + L+ L+ + Sbjct: 1425 PFVKDKMEDFHITLELAKRMSPCIIWIPNIHELNLNDATNYLFGFGFTDLFLSVLMNNLF 1484 Query: 426 GF-----EGNTGIIVVAATNRADILDSALLRPGRFDRQVSV 533 F + I+V+A+T+ +D AL+ P R DR +++ Sbjct: 1485 RFRDGEKDSMRNILVIASTHIPQRVDPALIAPNRLDRSINI 1525
>YCF2_MARPO (P09975) Protein ycf2| Length = 2136 Score = 54.7 bits (130), Expect = 2e-07 Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 17/183 (9%) Frame = +3 Query: 117 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV--------EMFVGVGASR 272 G KG+LL+GP TG++ L K +A E+ VP F IS ++ + E ++ + Sbjct: 1393 GLSYSKGILLIGPIETGRSYLIKNLAAESYVPLFKISINKLLYNKPDVITESWMNILIES 1452 Query: 273 VRDL---FKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQT------LNQLLTEMD 425 +R L AK+ +PCI+++ I + N E + T L T+ Sbjct: 1453 LRRLNLTLDFAKKMSPCIIWIQNIHQL----NVNRLTQNVESDPTFLLGILLKYFQTDFS 1508 Query: 426 GFEGNTGIIVVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHGSNKKFDAD 605 + N IIV+ +T+ +D AL+ P R D+ ++V + ++ R + + K F Sbjct: 1509 KTKKN-NIIVIGSTHLPKKVDPALISPNRLDKIINVRLFNISQRKKQFPLLLKKKNFQLK 1567 Query: 606 VSL 614 +L Sbjct: 1568 ENL 1570
>ATD3A_HUMAN (Q9NVI7) ATPase family AAA domain-containing protein 3A| Length = 634 Score = 52.0 bits (123), Expect = 1e-06 Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 1/160 (0%) Frame = +3 Query: 102 RFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRD 281 R T + + +L+ GPPGTGKTL AK +A +G+ + ++G + M G + + Sbjct: 384 RNTKKNRSLYRNILMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHK 442 Query: 282 LFKKAK-ENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVV 458 LF A ++FVDE DA +++ TLN L + + ++V Sbjct: 443 LFDWANTSRRGLLLFVDEADA--FLRKRATEKISEDLRATLNAFLYRTG--QHSNKFMLV 498 Query: 459 AATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 578 A+N+ + D A+ R + V D+P R +++++ Sbjct: 499 LASNQPEQFDWAI--NDRINEMVHFDLPGQEERERLVRMY 536
>ATAD3_MOUSE (Q925I1) ATPase family AAA domain-containing protein 3 (AAA-ATPase| TOB3) Length = 591 Score = 50.4 bits (119), Expect = 4e-06 Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 1/160 (0%) Frame = +3 Query: 102 RFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRD 281 R T + + VL+ GPPGTGKTL AK +A +G+ + ++G + M G + + Sbjct: 335 RNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPM-GREGVTAMHK 393 Query: 282 LFKKAK-ENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGNTGIIVV 458 +F A ++FVDE DA +++ TLN L + ++ ++V Sbjct: 394 VFDWASTSRRGLLLFVDEADA--FLRKRATEKISEDLRATLNAFLHRTG--QHSSKFMLV 449 Query: 459 AATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVH 578 A+N+ + D A+ R D V +P R +++++ Sbjct: 450 LASNQPEQFDWAI--NDRIDEMVCFALPQREERERLVRMY 487
>YCF2_PINKO (Q85WV5) Protein ycf2| Length = 1320 Score = 50.4 bits (119), Expect = 4e-06 Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 20/159 (12%) Frame = +3 Query: 117 GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV-----------------E 245 G+ KG+LL+GP GTG++ L K++A ++ VP IS + + Sbjct: 619 GSLFSKGILLIGPMGTGRSYLIKSLAADSYVPLIRISLKKLLYGKFLYYPDPGRIPTEFN 678 Query: 246 MFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMD 425 F F+ AK +PCI+++ I + + L LL + Sbjct: 679 TFWRDTIDHFHITFELAKRMSPCIIWIPNIHELNVNDTITHLFGLGFTDSFLGLLLNYIS 738 Query: 426 -GFEGNT--GIIVVAATNRADILDSALLRPGRFDRQVSV 533 G E ++ I+ +A+T+ +D AL+ P R D +++ Sbjct: 739 RGGEKDSIRNILFIASTHIPQRVDPALIAPNRLDSSINI 777
>RFCL_AERPE (Q9YBS5) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 479 Score = 49.3 bits (116), Expect = 1e-05 Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 8/113 (7%) Frame = +3 Query: 30 DDVAGVDEAKQDFMEVVEFL---KKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 200 +DV D+AK+ + + +KP++ + LL GPPG GKT L +AIA E Sbjct: 22 EDVVNQDQAKKILVPWFKAWLEGRKPDK---------RAALLYGPPGVGKTSLVEAIASE 72 Query: 201 AGVPFFSISGSEF-----VEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 344 + ++ S++ +E VG ASR R +FK+ ++ +DE+D + Sbjct: 73 FNLEMIELNASDYRRRSDIERIVG-AASRKRSMFKRG-----VVILLDEVDGI 119
>PCH2_CAEEL (Q09535) Putative pachytene checkpoint protein 2| Length = 424 Score = 48.9 bits (115), Expect = 1e-05 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 15/160 (9%) Frame = +3 Query: 138 VLLVGPPGTGKTLLAKAIAGEAGVPFFS----------ISGSEFVEMFVGVG--ASRVRD 281 +LL GPPGTGKT L K +A + S S F + F G ++ D Sbjct: 175 ILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFD 234 Query: 282 LFKKAKENAPCIVFV--DEIDAVXXXXXXXXXXXN-DEREQTLNQLLTEMDGFEGNTGII 452 + E+ C+VFV DE++++ + + +N LLT++D ++ Sbjct: 235 QIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDNVL 294 Query: 453 VVAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILK 572 ++ +N LD AL+ R D +V P R +LK Sbjct: 295 ILCTSNLESTLDKALV--DRADIVKNVGQPSDFARYSMLK 332
>RFCL_NANEQ (P60373) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 430 Score = 48.9 bits (115), Expect = 1e-05 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 5/112 (4%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 T D+V ++AKQ + V KK + K +LL GPPGTGKT A+A E Sbjct: 41 TLDEVENQEQAKQILRDYVINYKKKYK--------GKALLLYGPPGTGKTSSVYALANEL 92 Query: 204 GVPFFSISGSE-----FVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 344 G ++ S+ + VG AS+ + LF K + I+ VDE+D + Sbjct: 93 GYEVLEVNASDERDAIHIHHIVG-EASKGKPLFHKGR-----IILVDEVDGL 138
>RFCL_METMP (Q6M0E9) Replication factor C large subunit (RFC large subunit)| (Clamp loader large subunit) Length = 486 Score = 48.9 bits (115), Expect = 1e-05 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 5/112 (4%) Frame = +3 Query: 24 TFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEA 203 + +DVAG ++ KQ +E +E + +G + K +LL GPPG+GKT LA AIA + Sbjct: 12 SLNDVAGHNKTKQALIEWIESI--------IGGQNQKPILLAGPPGSGKTTLAYAIANDY 63 Query: 204 GVPFFSISGS-----EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 344 ++ S + + VG A+ K+ ++ +DE+D + Sbjct: 64 AFDVIELNASDKRNKDVISQVVGTAAT------SKSLTGRRTLIVLDEVDGL 109
>CLPX_PORGI (Q7MX10) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 411 Score = 48.1 bits (113), Expect = 2e-05 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 10/141 (7%) Frame = +3 Query: 36 VAGVDEAKQDFMEVV---EFLKKPERFTAVGARIPKG-VLLVGPPGTGKTLLAKAIAGEA 203 V G D+AK+ F+ V + + ++ + G I K +++VGP GTGKTLLA+ IA Sbjct: 77 VIGQDDAKR-FLSVAVYNHYKRLLQQEDSDGVEIEKSNIIMVGPTGTGKTLLARTIAKML 135 Query: 204 GVPFFSISGSEFVEM-FVGVGASRVRDLFKKA-----KENAPCIVFVDEIDAVXXXXXXX 365 VPF + + E +VG + +A K+ IVF+DEID + Sbjct: 136 HVPFAVVDATVLTEAGYVGEDIESILTRLLQAADYDVKQAERGIVFIDEIDKIARKSDNP 195 Query: 366 XXXXNDEREQTLNQLLTEMDG 428 + E LL ++G Sbjct: 196 SITRDVSGEGVQQGLLKLLEG 216
>Y1189_COXBU (P39918) Hypothetical protein CBU1189| Length = 440 Score = 47.8 bits (112), Expect = 3e-05 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 11/147 (7%) Frame = +3 Query: 138 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK--ENAP 311 ++L GPPG+GKT LA+ IA +AG SIS V G +RD+ ++A+ + Sbjct: 47 MILWGPPGSGKTTLAEIIAQKAGARVESISA-------VLAGVKDIRDVVERAERHKGQA 99 Query: 312 CIVFVDEIDAVXXXXXXXXXXXNDEREQTLNQLLTEMDGFEGN------TGIIVVAATNR 473 I+FVDE+ ++ TL TE F+ N T + V+ Sbjct: 100 TILFVDEVHGFNKSQQDAFLPHVEKGTITLIGATTENPSFQLNNALLSRTRVYVLKQLTE 159 Query: 474 AD---ILDSALLRPGRFDRQVSVDVPD 545 AD IL++AL R + ++++P+ Sbjct: 160 ADLLSILENALANEERGLGKKALEIPE 186
>HSLU_OCEIH (Q8CXH1) ATP-dependent hsl protease ATP-binding subunit hslU| Length = 465 Score = 47.8 bits (112), Expect = 3e-05 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Frame = +3 Query: 126 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM-FVGVGA-SRVRDLFKKA 296 +PK +L++GP G GKT +A+ +A G PF + ++F E+ +VG S VRDL + A Sbjct: 50 VPKNILMIGPTGVGKTEIARRLAKLVGAPFIKVEATKFTEVGYVGRDVESMVRDLVEMA 108 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,899,271 Number of Sequences: 219361 Number of extensions: 1738913 Number of successful extensions: 12099 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 10517 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11588 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
