ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal18c11 |
|---|---|
| Clone Library Name | barley_pub |
>ASPP1_HUMAN (Q96KQ4) Apoptosis stimulating of p53 protein 1 (Protein| phosphatase 1 regulatory subunit 13B) Length = 1090 Score = 38.1 bits (87), Expect = 0.022 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%) Frame = +1 Query: 208 TEALGVDVGCPSPPRLRLEDAIDASY--------LEPSQSATTAIRQQGALPRPSTGTPA 363 TE G+++G PP + + SY L P +++ R++G+LPRPS G P+ Sbjct: 437 TEKPGIEIGKVPPPIPGVGKQLPPSYGTYPSPTPLGPGSTSSLERRKEGSLPRPSAGLPS 496 Query: 364 QHTL*MLPA 390 + +LPA Sbjct: 497 RQRPTLLPA 505
>ASPP1_MOUSE (Q62415) Apoptosis stimulating of p53 protein 1 (Protein| phosphatase 1 regulatory subunit 13B) Length = 1087 Score = 36.6 bits (83), Expect = 0.065 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 10/122 (8%) Frame = +1 Query: 52 SRCANRWSMPPSYRRSPTPGWSAATAPPRPTWMSFVSNGSSALATARPWR--DTTEALGV 225 S+ AN + PP + S + + T + + M + + P TE LG+ Sbjct: 381 SKSANDGNWPPLKQNSASVKSTQMTGDWKDSGMEGTLKQGAISSQPLPLSALGATEKLGI 440 Query: 226 DVGCPSPPRLRLEDAIDASY--------LEPSQSATTAIRQQGALPRPSTGTPAQHTL*M 381 ++G PP + + SY L P +++ R++G+LPRP G P++ Sbjct: 441 EIGKGPPPIPGVGKPLPPSYGTYPSSGPLGPGSTSSLERRKEGSLPRPGAGPPSRQKPAP 500 Query: 382 LP 387 LP Sbjct: 501 LP 502
>PROA_SYNEL (Q8DKU1) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 439 Score = 33.1 bits (74), Expect = 0.72 Identities = 32/109 (29%), Positives = 43/109 (39%), Gaps = 6/109 (5%) Frame = +3 Query: 24 GRSMAAALPQPLRQSLVYAPLLPPFAYTRLVCSYG------SASADMDELCLQRIVRTGH 185 G AALP PL Q ++ L +R+ C G A D +++G+ Sbjct: 91 GVRQVAALPDPLGQRQLHRELDTGLILSRVTCPLGVLGVIFEARPDAVVQIASLAIKSGN 150 Query: 186 RTALEGYDRGSRSGCRMPLPTSTEAGGCHRCLLPRAVPVGYHRYTTTRS 332 L+G SRS C+ + T HR L AVP G T RS Sbjct: 151 GAILKGGQEASRS-CQTIMQT------IHRGLEKSAVPAGAIALLTQRS 192
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 33.1 bits (74), Expect = 0.72 Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 4/116 (3%) Frame = +1 Query: 16 PHLAGPWRPPFPSRCANRWSMPPSYRRSPTPGWSAATAPPRPTWMSFVSNGSSALAT--- 186 P +GP R P P + S+ P+ +P P A+T P + MS SS A Sbjct: 2789 PVTSGPTRAPPPD---SPTSLAPTPALAP-PASQASTLSPSTSSMSANQALSSLKAVGPP 2844 Query: 187 -ARPWRDTTEALGVDVGCPSPPRLRLEDAIDASYLEPSQSATTAIRQQGALPRPST 351 A P R L PSPP + + + S++ + + T QG P PS+ Sbjct: 2845 PATPPRKHRGLLATQQAEPSPPSIVVTPSEPRSFVPDTGTLTPTSSPQGVKPAPSS 2900
>ANLN_XENLA (Q801E2) Actin-binding protein anillin| Length = 1116 Score = 33.1 bits (74), Expect = 0.72 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = +2 Query: 398 AWEENVNHGQLESREEKPSPGASCLRSSSPTSSAA 502 +WE++++H ++ ++ PG +CL S TSSA+ Sbjct: 201 SWEDDLSHPFVKPNNKQEKPGTACLSKESTTSSAS 235
>ANLN_MOUSE (Q8K298) Actin-binding protein anillin| Length = 1121 Score = 32.7 bits (73), Expect = 0.94 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +2 Query: 398 AWEENVNHGQLESREEKPSPGASCLRSSSPTSSAA 502 +WE++V+H + + PG +CL SS S A+ Sbjct: 209 SWEDDVSHSSAKQNSVQEQPGTACLSKSSSASGAS 243
>DGC14_CAEEL (P34420) DGCR14 protein homolog (DiGeorge syndrome critical region| 14 homolog) Length = 531 Score = 32.7 bits (73), Expect = 0.94 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Frame = +1 Query: 37 RPPFPS-RCANRWSMPPSYRRSPTPG--WSAATAPPRPTW 147 + PF S + + WS P S +RS TPG WS + P +W Sbjct: 451 KSPFASPKIMSNWSRPSSSKRSTTPGSAWSRGSTTPGSSW 490
>NGF_PIG (Q29074) Beta-nerve growth factor precursor (Beta-NGF) (Fragment)| Length = 229 Score = 32.7 bits (73), Expect = 0.94 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 13/59 (22%) Frame = +2 Query: 473 RSSSPTSSAAEDGDGRHW-------------LDGDGATAAWRDGRLTTVCV*TMTSKKG 610 R +P S D +HW L DG AAWR R+ T CV ++ K G Sbjct: 168 RDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKAG 226
>NGF_BOVIN (P13600) Beta-nerve growth factor precursor (Beta-NGF) (Fragment)| Length = 231 Score = 32.7 bits (73), Expect = 0.94 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 13/59 (22%) Frame = +2 Query: 473 RSSSPTSSAAEDGDGRHW-------------LDGDGATAAWRDGRLTTVCV*TMTSKKG 610 R +P S D +HW L DG AAWR R+ T CV ++ K G Sbjct: 170 RDPNPVDSGCRGIDAKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRKTG 228
>NGF_CHICK (P05200) Beta-nerve growth factor precursor (Beta-NGF)| Length = 243 Score = 32.3 bits (72), Expect = 1.2 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 13/59 (22%) Frame = +2 Query: 473 RSSSPTSSAAEDGDGRHW-------------LDGDGATAAWRDGRLTTVCV*TMTSKKG 610 R P SS D +HW L +G AAWR R+ T CV ++ K G Sbjct: 183 RDPRPVSSGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACVCVLSRKSG 241
>POLS_RUBVM (P08563) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 992 Score = 32.3 bits (72), Expect = 1.2 Identities = 21/71 (29%), Positives = 25/71 (35%), Gaps = 8/71 (11%) Frame = +1 Query: 40 PPFPSRCANRWSMPP----SYRRSPTPGWSAATAPPRPTWMSFVSNGSSALATARP---- 195 P +P CA RW +PP P GW+ P P AT P Sbjct: 464 PAYPVCCAMRWGLPPWELVILTARPEDGWTCRGVPAHPGTRCPELVSPMGRATCSPASAL 523 Query: 196 WRDTTEALGVD 228 W T AL +D Sbjct: 524 WLATANALSLD 534
>NGFV_NAJKA (P61899) Vemon nerve growth factor (v-NGF)| Length = 116 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 13/81 (16%) Frame = +2 Query: 407 ENVNHGQLESREEKPSPGASCLRSSSPTSSAAEDGDGRHW-------------LDGDGAT 547 ENVN L+++ K + ++ +P S D HW L +G Sbjct: 38 ENVN---LDNKVYKEYFFETKCKNPNPEPSGCRGIDSSHWNSYCTETDTFIKALTMEGNQ 94 Query: 548 AAWRDGRLTTVCV*TMTSKKG 610 A+WR R+ T CV +T KKG Sbjct: 95 ASWRFIRIETACVCVITKKKG 115
>NGFV_NAJAT (P61898) Vemon nerve growth factor (v-NGF)| Length = 116 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 13/81 (16%) Frame = +2 Query: 407 ENVNHGQLESREEKPSPGASCLRSSSPTSSAAEDGDGRHW-------------LDGDGAT 547 ENVN L+++ K + ++ +P S D HW L +G Sbjct: 38 ENVN---LDNKVYKEYFFETKCKNPNPEPSGCRGIDSSHWNSYCTETDTFIKALTMEGNQ 94 Query: 548 AAWRDGRLTTVCV*TMTSKKG 610 A+WR R+ T CV +T KKG Sbjct: 95 ASWRFIRIETACVCVITKKKG 115
>ANLN_HUMAN (Q9NQW6) Actin-binding protein anillin| Length = 1124 Score = 31.2 bits (69), Expect = 2.7 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +2 Query: 398 AWEENVNHGQLESREEKPSPGASCLRSSSPTSSAA 502 +WE++VNH + + PG +CL S S A+ Sbjct: 211 SWEDDVNHSFAKQNSVQEQPGTACLSKFSSASGAS 245
>SMG1_DROME (Q70PP2) Serine/threonine-protein kinase Smg1 (EC 2.7.11.1)| Length = 3218 Score = 31.2 bits (69), Expect = 2.7 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 8/75 (10%) Frame = -1 Query: 212 SVVSLQGRAVASADDPLETKLIHVGRGGAVAADQPGVGER--------R*EGGIDQRLAQ 57 SV+S+ G + D L+ LI++G G V D E+ + + Q L Q Sbjct: 2091 SVMSMIGYVIGLGDRHLDNVLINLGSGDIVHIDYNVCFEKGRTLRIPEKVPFRLTQNLVQ 2150 Query: 56 RLGKGGRHGPARCGC 12 +G G GP R GC Sbjct: 2151 AMGITGIEGPFRLGC 2165
>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 348 Score = 31.2 bits (69), Expect = 2.7 Identities = 49/198 (24%), Positives = 67/198 (33%), Gaps = 17/198 (8%) Frame = +1 Query: 28 GPWRPPFPSRCANRWSMPPSYRRSPTPG--------------WSAATAPPRPTWMSFVSN 165 G WR P+ RW+ P SPT G W T RP +F Sbjct: 47 GEWRVVQPAYGQARWTTSPP-PASPTSGSLRRPTLSASKATCWGGCTIWTRPIIEAFHGK 105 Query: 166 GSSALATARPWRDTTEALGV-DVGCPSPPRLRLEDAIDASYLEPSQSATTAIRQQGALPR 342 G +A T E + C PPRL ++ P + R+ G R Sbjct: 106 GVQVIADIVINHRTAEHKDSRGIYCRLPPRL------GPAHDLPRRPLRRRHRKPGHRRR 159 Query: 343 PSTGTPAQHTL*MLPA*SCLGRKCKSWAT*ESRRKT*SRCELPEEFVADVIGCGRRR--W 516 ST + + + S G W + +R + S P + R W Sbjct: 160 TSTTSTSASS-----GSSSAGSTGSRWTSASTRGASTSPRATPPTWQRSTSMPPSRASPW 214 Query: 517 PTLAGRRWRNSGLAGRTS 570 P GRRWR +G A RT+ Sbjct: 215 PRY-GRRWRTAGTASRTT 231
>NGF_PANTR (Q9N2F1) Beta-nerve growth factor precursor (Beta-NGF)| Length = 241 Score = 30.8 bits (68), Expect = 3.6 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 13/57 (22%) Frame = +2 Query: 473 RSSSPTSSAAEDGDGRHW-------------LDGDGATAAWRDGRLTTVCV*TMTSK 604 R +P S D +HW L DG AAWR R+ T CV ++ K Sbjct: 180 RDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRK 236
>NGF_HUMAN (P01138) Beta-nerve growth factor precursor (Beta-NGF)| Length = 241 Score = 30.8 bits (68), Expect = 3.6 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 13/57 (22%) Frame = +2 Query: 473 RSSSPTSSAAEDGDGRHW-------------LDGDGATAAWRDGRLTTVCV*TMTSK 604 R +P S D +HW L DG AAWR R+ T CV ++ K Sbjct: 180 RDPNPVDSGCRGIDSKHWNSYCTTTHTFVKALTMDGKQAAWRFIRIDTACVCVLSRK 236
>SI1L3_HUMAN (O60292) Signal-induced proliferation-associated 1-like protein 3| (SPA-1-like protein 3) Length = 1781 Score = 30.8 bits (68), Expect = 3.6 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +1 Query: 37 RPPFPSRCANRWSMPPSYRRSPTPGWSAATAP 132 RPP+ S +WS P S+ P W+ T P Sbjct: 1073 RPPYRSNAPWQWSGPASHNSLPASKWATPTTP 1104
>NGF_XENLA (P21617) Nerve growth factor precursor (NGF)| Length = 231 Score = 30.8 bits (68), Expect = 3.6 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 13/59 (22%) Frame = +2 Query: 473 RSSSPTSSAAEDGDGRHW-------------LDGDGATAAWRDGRLTTVCV*TMTSKKG 610 R P SS D +HW L +G AAWR R+ T CV + S+KG Sbjct: 172 RDPKPVSSGCRGIDAKHWNSYCTTTHTFVKALTMEGKQAAWRFIRIDTACV-CVLSRKG 229
>YI31_AGRT7 (P05680) Insertion element IS136 hypothetical 16.9 kDa protein| Length = 159 Score = 30.8 bits (68), Expect = 3.6 Identities = 26/96 (27%), Positives = 32/96 (33%), Gaps = 1/96 (1%) Frame = +1 Query: 82 PSYRRSPTPGWSAATAPPRPT-WMSFVSNGSSALATARPWRDTTEALGVDVGCPSPPRLR 258 P S TP S A+ P W S +A AR W G SP + Sbjct: 66 PPISLSSTPNGSIASWVTTPCYWRSTQPFARAASTMARSWSCAPTCAGARTAWSSPAGMA 125 Query: 259 LEDAIDASYLEPSQSATTAIRQQGALPRPSTGTPAQ 366 S++ PS S + R P P PAQ Sbjct: 126 ------RSFVSPSSSTPSTARSSPGRPLPMQAFPAQ 155
>POLS_RUBVH (P21480) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 1063 Score = 30.4 bits (67), Expect = 4.6 Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 8/71 (11%) Frame = +1 Query: 40 PPFPSRCANRWSMPP----SYRRSPTPGWSAATAPPRPTWMSFVSNGSSALATARP---- 195 PP CA RW +PP P GW+ P P AT P Sbjct: 466 PPTRFGCAMRWGLPPWELVVLTARPEDGWTCRGVPAHPGTRCPELVSPMGRATCSPASAL 525 Query: 196 WRDTTEALGVD 228 W T AL +D Sbjct: 526 WLATANALSLD 536
>NGF_PRANA (P20675) Beta-nerve growth factor precursor (Beta-NGF)| Length = 241 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 13/57 (22%) Frame = +2 Query: 473 RSSSPTSSAAEDGDGRHW-------------LDGDGATAAWRDGRLTTVCV*TMTSK 604 R+ +P S D +HW L D AAWR R+ T CV +T K Sbjct: 180 RARNPVESGCRGIDSKHWNSYCTTTHTFVKALTTDDRQAAWRFIRIDTACVCVLTRK 236
>NGF_MOUSE (P01139) Beta-nerve growth factor precursor (Beta-NGF)| Length = 241 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 13/57 (22%) Frame = +2 Query: 473 RSSSPTSSAAEDGDGRHW-------------LDGDGATAAWRDGRLTTVCV*TMTSK 604 R+S+P S D +HW L D AAWR R+ T CV ++ K Sbjct: 180 RASNPVESGCRGIDSKHWNSYCTTTHTFVKALTTDEKQAAWRFIRIDTACVCVLSRK 236
>INO80_NEUCR (Q872I5) Putative DNA helicase ino-80 (EC 3.6.1.-)| Length = 2001 Score = 30.4 bits (67), Expect = 4.6 Identities = 26/95 (27%), Positives = 36/95 (37%) Frame = +1 Query: 28 GPWRPPFPSRCANRWSMPPSYRRSPTPGWSAATAPPRPTWMSFVSNGSSALATARPWRDT 207 GP PP P R R + P S +AA APP P + S+ +A + P + Sbjct: 32 GPAPPPPPPRGGLRDILNPVSSNSAVQSQAAAAAPPPPP--AVASSSLHGIAASVPPPSS 89 Query: 208 TEALGVDVGCPSPPRLRLEDAIDASYLEPSQSATT 312 T ++ S LR + Y P S T Sbjct: 90 TNSMRATPHSSSSFNLRSPTREPSEYRHPLSSLAT 124
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 30.4 bits (67), Expect = 4.6 Identities = 31/118 (26%), Positives = 45/118 (38%), Gaps = 4/118 (3%) Frame = +1 Query: 16 PHLAGPWRPPFPSRCANRWSMPPSYRRSPTPGWSAATAPPRPTWMSFVSNGSSALAT--- 186 P +GP R P P + PP + A+T P + MS SS A Sbjct: 2786 PVTSGPTRAPPPDSPTSLVPTPPLAPQVS----QASTLSPSTSSMSANQALSSLKAVGPP 2841 Query: 187 -ARPWRDTTEALGVDVGCPSPPRLRLEDAIDASYLEPSQSATTAIRQQGALPRPSTGT 357 A P R L PSPP + + + S++ + + T QG P PS+ + Sbjct: 2842 PATPPRKHRGLLATQQAEPSPPSILVTPSEHKSFVPDTGTLTPTSSPQGVKPAPSSSS 2899
>MUCDL_MOUSE (Q8VHF2) Mucin and cadherin-like protein precursor| (Mu-protocadherin) Length = 831 Score = 30.4 bits (67), Expect = 4.6 Identities = 24/91 (26%), Positives = 38/91 (41%) Frame = +1 Query: 94 RSPTPGWSAATAPPRPTWMSFVSNGSSALATARPWRDTTEALGVDVGCPSPPRLRLEDAI 273 ++P PG S TAP T S ++ S + +T P T++ + G + + Sbjct: 542 QTPKPGTSHPTAPTSRTSTSLMTTSSRSDSTQTPKPGTSQPMVPIPGASTSSQPATPSGS 601 Query: 274 DASYLEPSQSATTAIRQQGALPRPSTGTPAQ 366 +P S +TA G + PSTG Q Sbjct: 602 SPQTPKPGTSQSTA---TGPISLPSTGAGEQ 629
>CHX10_CHICK (Q9IAL1) Homeobox protein Chx10 (Ceh-10 homeodomain-containing| homolog) Length = 377 Score = 30.4 bits (67), Expect = 4.6 Identities = 23/77 (29%), Positives = 34/77 (44%) Frame = +1 Query: 73 SMPPSYRRSPTPGWSAATAPPRPTWMSFVSNGSSALATARPWRDTTEALGVDVGCPSPPR 252 ++ PS P P +AA APP P + S E LG++ PS PR Sbjct: 8 ALAPSLPGKPKPDGAAAAAPPPPPPAAGAKPSSGPTPPRCTGFGIQEILGLNKEPPSHPR 67 Query: 253 LRLEDAIDASYLEPSQS 303 L D++ A +L ++S Sbjct: 68 AAL-DSLPAGHLLAARS 83
>L100_ADE41 (P11824) Late 100 kDa protein| Length = 777 Score = 30.4 bits (67), Expect = 4.6 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -1 Query: 143 VGRGGAVAADQPGVGERR*EGGIDQRLAQRLGKGGRHGPARCGCSSR 3 VGRGG + QPG G R GG + R G GG+ R G + R Sbjct: 698 VGRGGGILGRQPGRGSFR-RGGNGELGKSRRGAGGQTPQGRGGRNHR 743
>NBEA_DROME (Q9W4E2) Protein neurobeachin (Protein rugose) (A-kinase anchor| protein 550) (AKAP 550) (dAKAP550) Length = 3584 Score = 30.4 bits (67), Expect = 4.6 Identities = 22/63 (34%), Positives = 30/63 (47%) Frame = -1 Query: 260 SLSRGGEGHPTSTPRASVVSLQGRAVASADDPLETKLIHVGRGGAVAADQPGVGERR*EG 81 +L GG + +S+P S +QG A A A + + VG GGAV GV G Sbjct: 2216 NLRNGGGANSSSSPPGSHQVIQGVATAGAVN--ANAAVGVGMGGAVGVGMGGVA-----G 2268 Query: 80 GID 72 G+D Sbjct: 2269 GLD 2271
>CAP2_DICDI (P34122) CABP1-related protein p31/p34| Length = 287 Score = 30.4 bits (67), Expect = 4.6 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 6/79 (7%) Frame = +1 Query: 31 PWRPPFPSRCANRWSMPPSYRRSPTPGWSAATAPPR----PTWMSFVSNGSSALATARPW 198 P PP PS A ++SMPP ++ G PP T +S V + +L+ P+ Sbjct: 53 PSAPP-PSAPAGQYSMPPPPQQQQQAGQYGMPPPPSGSGIGTGVSLVKDQQISLSKEDPY 111 Query: 199 -RDTTEALGVDVG-CPSPP 249 R T LG DV PS P Sbjct: 112 LRKLTVGLGWDVNTTPSAP 130
>ANF_SHEEP (O46540) Atrial natriuretic factor precursor (ANF) (Atrial| natriuretic peptide) (ANP) (Prepronatriodilatin) Length = 152 Score = 30.4 bits (67), Expect = 4.6 Identities = 22/78 (28%), Positives = 35/78 (44%) Frame = -1 Query: 332 APCCRIAVVADWDGSR*EASMASSSLSRGGEGHPTSTPRASVVSLQGRAVASADDPLETK 153 AP ++ V WDG R S + +G P + PR+ ++ + RA+ +A L Sbjct: 71 APLSPLSEVPPWDGGR---STQPREMGAPSDGDPGNPPRSVLLKSKLRALLTAPRSLRRS 127 Query: 152 LIHVGRGGAVAADQPGVG 99 GR + A Q G+G Sbjct: 128 SCFGGRMDRIGA-QSGLG 144
>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 1063 Score = 30.0 bits (66), Expect = 6.1 Identities = 21/71 (29%), Positives = 24/71 (33%), Gaps = 8/71 (11%) Frame = +1 Query: 40 PPFPSRCANRWSMPP----SYRRSPTPGWSAATAPPRPTWMSFVSNGSSALATARP---- 195 PP CA RW +PP P GW+ P P AT P Sbjct: 466 PPTRFGCAMRWGLPPWELVVLTARPEDGWTCRGVPAHPGARCPELVSPMGRATCSPASAL 525 Query: 196 WRDTTEALGVD 228 W T AL +D Sbjct: 526 WLATANALSLD 536
>NGFV2_NAJSP (Q5YF89) Venom nerve growth factor 2 precursor (vNGF-2) (Nerve| growth factor II) Length = 241 Score = 30.0 bits (66), Expect = 6.1 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 13/81 (16%) Frame = +2 Query: 407 ENVNHGQLESREEKPSPGASCLRSSSPTSSAAEDGDGRHW-------------LDGDGAT 547 ENVN L+++ K + ++ +P S D HW L +G Sbjct: 163 ENVN---LDNKVYKQYFFETKCKNPNPVPSGCRGIDSSHWNSYCTETDTFIKALTMEGNQ 219 Query: 548 AAWRDGRLTTVCV*TMTSKKG 610 A+WR R+ T CV +T K G Sbjct: 220 ASWRFIRIDTACVCVITKKTG 240
>ALU6_HUMAN (P39193) Alu subfamily SP sequence contamination warning entry| Length = 593 Score = 30.0 bits (66), Expect = 6.1 Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 4/47 (8%) Frame = +1 Query: 52 SRCANRWSMPPSYRRSPTPG----WSAATAPPRPTWMSFVSNGSSAL 180 S C + WS P R S G W PPRP F +G S L Sbjct: 361 SPCWSGWSRTPDLRXSARLGLPKCWDYRREPPRPAXXXFFXDGVSLL 407
>P100_HCMVA (P08318) Large structural phosphoprotein (pp150) (150 kDa matrix| phosphoprotein) (Basic phosphoprotein) (BPP) (Tegument protein UL32) Length = 1048 Score = 30.0 bits (66), Expect = 6.1 Identities = 30/121 (24%), Positives = 43/121 (35%), Gaps = 2/121 (1%) Frame = +2 Query: 158 SPTDRPHWPPHGPGGIRQRLSEWMSDAPPHLD*GWXXXXXXXXXXXXXXXXXXYDNKERC 337 S + H P G S W P + YD +E+ Sbjct: 315 SSVPKKHVPTQPLDGWSWIASPWKGHKPFRFEAHGSLAPAAEAHAARSAAVGYYDEEEKR 374 Query: 338 RVRPRVPLLSILCRCYQHSLAWEENVNHGQLESREEKPSPGASCLRSSSPT--SSAAEDG 511 R R + ++ R Q AWEE + L+ R+++P P A +S SSA ED Sbjct: 375 RERQKRVDDEVVQREKQQLKAWEERQQN--LQQRQQQPPPPARKPSASRRLFGSSADEDD 432 Query: 512 D 514 D Sbjct: 433 D 433
>ACSA_RHOCA (O68040) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) Length = 656 Score = 30.0 bits (66), Expect = 6.1 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 11/83 (13%) Frame = +3 Query: 69 LVYAPLLPPFAYTRLVCSYGSA------SADMDELCLQRIVRTGHRTALEGYDRGSRSGC 230 ++Y P++P AY L C+ A + + RI G + + D R G Sbjct: 143 VIYLPMIPEAAYAMLACARIGAIHSIVFAGFSPDALANRINDCGAKLVITA-DTAPRGGR 201 Query: 231 RMPLPTSTEAGGCH-----RCLL 284 R PL +T+A H RCL+ Sbjct: 202 RTPLKANTDAALLHCSDKVRCLV 224
>SYNP2_HUMAN (Q9UMS6) Synaptopodin-2 (Myopodin) (Genethonin 2)| Length = 1093 Score = 30.0 bits (66), Expect = 6.1 Identities = 21/86 (24%), Positives = 35/86 (40%) Frame = +1 Query: 103 TPGWSAATAPPRPTWMSFVSNGSSALATARPWRDTTEALGVDVGCPSPPRLRLEDAIDAS 282 +P WS AP +P A T+ P + T + + + PS P R ++ + Sbjct: 777 SPVWSPGVAPTQPP----------AFPTSNPSKGTVVS-SIKIAQPSYPPARPASTLNVA 825 Query: 283 YLEPSQSATTAIRQQGALPRPSTGTP 360 P + A+ Q P+P+ TP Sbjct: 826 --GPFKGPQAAVASQNYTPKPTVSTP 849
>NH150_CAEEL (O17573) Nuclear hormone receptor family member nhr-150| Length = 342 Score = 30.0 bits (66), Expect = 6.1 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Frame = +2 Query: 329 ERCRVRPRVPLLSILCRCYQHSLAWEENVNHGQLESREEKPSPGA-SCLRSSSPTSSAAE 505 ++C + R+ L S CR + +E + +++S +K S A SC+ + S ++S + Sbjct: 37 KKCTCKTRI-LDSHPCRSCRILKCFEAGMTSKKIQSGRDKTSTKAISCISTESTSNSLSA 95 Query: 506 DGDGRHWLDGDGATAAWRDGRLTTVCV*TMTSKKGIKIN 622 R L+ GA W++ T C KKG K N Sbjct: 96 RIIPRSSLNIHGAVHLWQEFENTRAC------KKGTKRN 128
>Y3447_MYCBO (P65082) Hypothetical protein Mb3447c| Length = 299 Score = 30.0 bits (66), Expect = 6.1 Identities = 29/113 (25%), Positives = 37/113 (32%) Frame = +1 Query: 31 PWRPPFPSRCANRWSMPPSYRRSPTPGWSAATAPPRPTWMSFVSNGSSALATARPWRDTT 210 P P P N W+ PTP A+ A P SA + P ++T Sbjct: 204 PSNPAAPGSVGNSWTPLAPVVEPPTPPTPASAAEP----------SMSAGVSESPMPNST 253 Query: 211 EALGVDVGCPSPPRLRLEDAIDASYLEPSQSATTAIRQQGALPRPSTGTPAQH 369 + PS P + E LEP+ AT Q P P T H Sbjct: 254 STVAAS---PSTPSSKPEPGSIDPSLEPADEATNPAGQ----PAPETPVSPTH 299
>Y3413_MYCTU (P65081) Hypothetical protein Rv3413c/MT3522| Length = 299 Score = 30.0 bits (66), Expect = 6.1 Identities = 29/113 (25%), Positives = 37/113 (32%) Frame = +1 Query: 31 PWRPPFPSRCANRWSMPPSYRRSPTPGWSAATAPPRPTWMSFVSNGSSALATARPWRDTT 210 P P P N W+ PTP A+ A P SA + P ++T Sbjct: 204 PSNPAAPGSVGNSWTPLAPVVEPPTPPTPASAAEP----------SMSAGVSESPMPNST 253 Query: 211 EALGVDVGCPSPPRLRLEDAIDASYLEPSQSATTAIRQQGALPRPSTGTPAQH 369 + PS P + E LEP+ AT Q P P T H Sbjct: 254 STVAAS---PSTPSSKPEPGSIDPSLEPADEATNPAGQ----PAPETPVSPTH 299
>RIR1_PRVKA (P50643) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 835 Score = 30.0 bits (66), Expect = 6.1 Identities = 31/107 (28%), Positives = 40/107 (37%), Gaps = 21/107 (19%) Frame = +1 Query: 16 PHLAGPWRPPFPSRCANRWSMPPSYRRSPTPGWSAATAPPRP-TWMSFVSNGSSALATAR 192 P AG PPFP PP R+P S T+P R M+ V +++ + A Sbjct: 6 PRPAGAVSPPFPPLAG-----PPLKARAPRARDSPLTSPCRAHAAMASVVAPAASSSAAA 60 Query: 193 PWRDT--------------------TEALGVDVGCPSPPRLRLEDAI 273 P D ALG DVG P+P R E A+ Sbjct: 61 PGADAFLDAACPEDVARALAAELEALRALGHDVGAPAPGASRREAAL 107
>C3G_DROME (O77086) Guanine nucleotide-releasing factor 2 (CRK SH3-binding| GNRP) Length = 1571 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/80 (31%), Positives = 36/80 (45%) Frame = +1 Query: 4 RDEHPHLAGPWRPPFPSRCANRWSMPPSYRRSPTPGWSAATAPPRPTWMSFVSNGSSALA 183 RD P P +PP P+R +N +PP R P+ SA T + + SN +S L Sbjct: 529 RDTSP----PPKPPLPNRASNPPPLPPKRRSQPSA--SAGTVGVGCSSSTSTSNQASPLP 582 Query: 184 TARPWRDTTEALGVDVGCPS 243 A + +L D+ C S Sbjct: 583 YA---QSHNISLNSDLDCSS 599
>MUTL_AGRT5 (Q8UHI3) DNA mismatch repair protein mutL| Length = 606 Score = 29.6 bits (65), Expect = 7.9 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 79 PPSYRRSPTPGWSAATAPPRPTWMS 153 P R SP+ WSAAT+P RP +S Sbjct: 349 PSGLRPSPSATWSAATSPSRPLAVS 373
>SYN_DROME (Q24546) Synapsin [Contains: Synapsin-1 (Syn1) (Syn1-S); Synapsin-2| (Syn2)] Length = 1025 Score = 29.6 bits (65), Expect = 7.9 Identities = 28/85 (32%), Positives = 34/85 (40%) Frame = +1 Query: 79 PPSYRRSPTPGWSAATAPPRPTWMSFVSNGSSALATARPWRDTTEALGVDVGCPSPPRLR 258 PP+ P PG A AP +SF + + A A P R V P+ P Sbjct: 42 PPNMPPPPAPGQPAGAAPELS--LSFGAGKTPATAAPAPPR--------GVSAPTSPAKS 91 Query: 259 LEDAIDASYLEPSQSATTAIRQQGA 333 E S L+ QS T A R QGA Sbjct: 92 RE-----SLLQRVQSLTGAARDQGA 111
>GA2L2_HUMAN (Q8NHY3) GAS2-like protein 2 (Growth arrest-specific 2-like 2)| (GAS2-related protein on chromosome 17) (GAR17 protein) Length = 880 Score = 29.6 bits (65), Expect = 7.9 Identities = 37/123 (30%), Positives = 50/123 (40%), Gaps = 19/123 (15%) Frame = +1 Query: 55 RCANRWSMPPSYRRSPTPGWSAATAPPRPTWMSFVSNGSSALATARPWRDT--------- 207 RC R S+ PS+R+ PT G S PP P S G T+ R+ Sbjct: 362 RCQER-SLIPSWRQ-PTAGDS----PPSPQ-SSSTQKGRDPQCTSSGKREERYPPELPRG 414 Query: 208 ----------TEALGVDVGCPSPPRLRLEDAIDASYLEPSQSATTAIRQQGALPRPSTGT 357 T++ G D G P+P RLR AI+A+ T I +G P P + Sbjct: 415 RIPTSWVHEETDSWGTDAGNPTPQRLR---AIEAT--------TKGISARGPSPLPRSFG 463 Query: 358 PAQ 366 PA+ Sbjct: 464 PAE 466
>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3| Length = 266 Score = 29.6 bits (65), Expect = 7.9 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = +3 Query: 126 GSASADMDELCLQRIVRTGHRTALE-GYDRGSRSGCRMPLPTSTEAGGCHRCLLPRAV-P 299 GSA E+ + ++ +RTA + GYD G G S GGC C LP A P Sbjct: 22 GSAKDIWTEVNELKSIQHANRTARQSGYDAGVNGG-------SASTGGCDACCLPGAAGP 74 Query: 300 VG 305 G Sbjct: 75 AG 76
>NGFV_NAJNA (P01140) Vemon nerve growth factor (v-NGF)| Length = 116 Score = 29.6 bits (65), Expect = 7.9 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 13/81 (16%) Frame = +2 Query: 407 ENVNHGQLESREEKPSPGASCLRSSSPTSSAAEDGDGRHW-------------LDGDGAT 547 ENVN L+++ K + ++ +P S D HW L +G Sbjct: 38 ENVN---LDNKVYKEYFFETKCKNPNPEPSGCRGIDSSHWNSYCTETDTFIKALTMEGNQ 94 Query: 548 AAWRDGRLTTVCV*TMTSKKG 610 A+WR R+ T CV +T K G Sbjct: 95 ASWRFIRIDTACVCVITKKTG 115
>WASF3_HUMAN (Q9UPY6) Wiskott-Aldrich syndrome protein family member 3| (WASP-family protein member 3) (WAVE-3 protein) (Verprolin homology domain-containing protein 3) Length = 502 Score = 26.9 bits (58), Expect(2) = 9.9 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +1 Query: 31 PWRPPFPSRCANRWSMPPSYRRSPTPGWSAATAPPRP 141 P +PPFP+ ++ + PP P+ G TAPP P Sbjct: 366 PMQPPFPASASSTHAAPP---HPPSTG-LLVTAPPPP 398 Score = 20.8 bits (42), Expect(2) = 9.9 Identities = 11/28 (39%), Positives = 11/28 (39%) Frame = +2 Query: 161 PTDRPHWPPHGPGGIRQRLSEWMSDAPP 244 P P PP GP G LS PP Sbjct: 396 PPPGPPPPPPGPPGPGSSLSSSPMHGPP 423 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,264,749 Number of Sequences: 219361 Number of extensions: 2474397 Number of successful extensions: 10550 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 9268 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10491 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
