ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal17n10 |
|---|---|
| Clone Library Name | barley_pub |
>TLP40_SPIOL (O49939) Peptidyl-prolyl cis-trans isomerase, chloroplast precursor| (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase) (40 kDa thylakoid lumen rotamase) Length = 449 Score = 204 bits (520), Expect = 1e-52 Identities = 104/158 (65%), Positives = 129/158 (81%), Gaps = 1/158 (0%) Frame = +3 Query: 120 LSGEKGNSFSWNKCAISIALSVGLITCPPTFGWSAHAFPL-EPVIPDISVLISGPPIKDP 296 L +K SFS +CAIS+AL+ LI+ P+ W HA L PV+PD++VLISGPPIKDP Sbjct: 56 LDKQKKRSFSVKECAISLALAAALISGVPSLSWERHAEALTSPVLPDLAVLISGPPIKDP 115 Query: 297 GALLRYALPIDNKAIREVQKPLEDITDSLKVSGVRALDSVERNVRQASRALTNGRSLILT 476 ALLRYALPIDNKAIREVQKPLEDIT+SL+V G++ALDSVERN++QASRAL NG+SLI+ Sbjct: 116 EALLRYALPIDNKAIREVQKPLEDITESLRVLGLKALDSVERNLKQASRALKNGKSLIIA 175 Query: 477 GLAESKRENGEKILDKLAVGLEELQRIIEDRNRNAVAP 590 GLAESK++ G ++LDKL G+ ELQ+I+E+RNR VAP Sbjct: 176 GLAESKKDRGVELLDKLEAGMGELQQIVENRNREGVAP 213
>PER50_ARATH (Q43731) Peroxidase 50 precursor (EC 1.11.1.7) (Atperox P50)| (PRXR2) (ATP9a) Length = 329 Score = 32.0 bits (71), Expect = 1.4 Identities = 17/50 (34%), Positives = 28/50 (56%) Frame = -2 Query: 292 SLMGGPEIRTEISGITGSSGKAWADHPNVGGQVINPTDNAIEIAHLFQLN 143 +L GGP+ E+ + G S A +VGG++ +PTD+ ++ LF N Sbjct: 138 NLAGGPQYDVELGRLDGLSSTA----ASVGGKLPHPTDDVNKLTSLFAKN 183
>PPNK1_BACHK (Q6HLY2) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 265 Score = 31.2 bits (69), Expect = 2.3 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 11/78 (14%) Frame = -2 Query: 331 LSMGKAYLNKAPGSLMGGPEIRTE-----------ISGITGSSGKAWADHPNVGGQVINP 185 L+M +A + A G+L+ EIR E IS +GS+ A + +GG +I+P Sbjct: 119 LAMNEATVKSAEGTLVTEVEIRGEYFETFRGDGLCISTPSGST----AYNKALGGAIIHP 174 Query: 184 TDNAIEIAHLFQLNEFPF 131 + AI+IA + +N F Sbjct: 175 SIEAIQIAEMASINNRVF 192
>PPNK1_BACCZ (Q63EG5) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 265 Score = 31.2 bits (69), Expect = 2.3 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 11/78 (14%) Frame = -2 Query: 331 LSMGKAYLNKAPGSLMGGPEIRTE-----------ISGITGSSGKAWADHPNVGGQVINP 185 L+M +A + A G+L+ EIR E IS +GS+ A + +GG +I+P Sbjct: 119 LAMNEATVKSAEGTLVTEVEIRGEYFETFRGDGLCISTPSGST----AYNKALGGAIIHP 174 Query: 184 TDNAIEIAHLFQLNEFPF 131 + AI+IA + +N F Sbjct: 175 SIEAIQIAEMASINNRVF 192
>PPNK1_BACCR (Q81GJ9) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 265 Score = 31.2 bits (69), Expect = 2.3 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 11/78 (14%) Frame = -2 Query: 331 LSMGKAYLNKAPGSLMGGPEIRTE-----------ISGITGSSGKAWADHPNVGGQVINP 185 L+M +A + A G+L+ EIR E IS +GS+ A + +GG +I+P Sbjct: 119 LAMNEATVKSAEGTLVTEVEIRGEYFETFRGDGLCISTPSGST----AYNKALGGAIIHP 174 Query: 184 TDNAIEIAHLFQLNEFPF 131 + AI+IA + +N F Sbjct: 175 SIEAIQIAEMASINNRVF 192
>PPNK1_BACC1 (Q73BU7) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 265 Score = 31.2 bits (69), Expect = 2.3 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 11/78 (14%) Frame = -2 Query: 331 LSMGKAYLNKAPGSLMGGPEIRTE-----------ISGITGSSGKAWADHPNVGGQVINP 185 L+M +A + A G+L+ EIR E IS +GS+ A + +GG +I+P Sbjct: 119 LAMNEATVKSAEGTLVTEVEIRGEYFETFRGDGLCISTPSGST----AYNKALGGAIIHP 174 Query: 184 TDNAIEIAHLFQLNEFPF 131 + AI+IA + +N F Sbjct: 175 SIEAIQIAEMASINNRVF 192
>PPNK1_BACAN (Q81TQ3) Probable inorganic polyphosphate/ATP-NAD kinase 1 (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase 1) Length = 265 Score = 31.2 bits (69), Expect = 2.3 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 11/78 (14%) Frame = -2 Query: 331 LSMGKAYLNKAPGSLMGGPEIRTE-----------ISGITGSSGKAWADHPNVGGQVINP 185 L+M +A + A G+L+ EIR E IS +GS+ A + +GG +I+P Sbjct: 119 LAMNEATVKSAEGTLVTEVEIRGEYFETFRGDGLCISTPSGST----AYNKALGGAIIHP 174 Query: 184 TDNAIEIAHLFQLNEFPF 131 + AI+IA + +N F Sbjct: 175 SIEAIQIAEMASINNRVF 192
>VG22_ICHV1 (Q00105) Hypothetical gene 22 protein| Length = 1403 Score = 30.4 bits (67), Expect = 4.0 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Frame = +3 Query: 303 LLRYALPIDNKAIREVQKPLEDITDSLKVSGVRALDSVERNVRQASRALTNGRS-LILTG 479 +L L + +RE+Q+ L + + + R + S E +R+ R LT+ R L+ TG Sbjct: 978 VLNAGLTLARTELREIQRELVHEKNKSRDAEQRHVAS-EAALREQIRTLTDERDRLLATG 1036 Query: 480 LAESKRENGE 509 +A+ +REN E Sbjct: 1037 VADLQRENAE 1046
>AMID_RHORH (P84650) Enantioselective amidase (EC 3.5.1.4)| Length = 517 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = +3 Query: 108 VRCALSGEKGNSFSWNKCAISIALSV-GLITCPPTFGWSAHAFPLEPVI 251 V CA+ G+ G S I I L+ G++ C PT G + FP+E I Sbjct: 186 VDCAVGGDGGGS-------IRIPLACCGIVGCKPTHGLKPYTFPIERTI 227
>LUZP1_RAT (Q9ESV1) Leucine zipper protein 1 (Leucine zipper motif-containing| protein) Length = 1051 Score = 29.3 bits (64), Expect = 8.9 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 9/89 (10%) Frame = +3 Query: 342 REVQKPLEDITDSLKVSGVRALDSVERNVRQASRALTNG----RSLILTGLAE-----SK 494 R + K + + L+V V+ L+S E + + ++L + +SL L+ + E K Sbjct: 145 RNLTKKISSELEMLRVK-VKELESSEDRLEKTEQSLVSELEKLKSLTLSFVNERKYLNEK 203 Query: 495 RENGEKILDKLAVGLEELQRIIEDRNRNA 581 + EK++ +L LE+ ++I D RNA Sbjct: 204 EKENEKLIKELTQKLEQNKKINRDHMRNA 232
>SMC3_YEAST (P47037) Structural maintenance of chromosome 3 (DA-box protein| SMC3) Length = 1230 Score = 29.3 bits (64), Expect = 8.9 Identities = 22/79 (27%), Positives = 36/79 (45%) Frame = +3 Query: 339 IREVQKPLEDITDSLKVSGVRALDSVERNVRQASRALTNGRSLILTGLAESKRENGEKIL 518 I +V K L I SLK+ L + + S+ LTN I + + ++ L Sbjct: 274 IDQVSKKLSSIEASLKIKNATDLQQAKLRESEISQKLTNVNVKIKDVQQQIESNEEQRNL 333 Query: 519 DKLAVGLEELQRIIEDRNR 575 D + L+E++ IIE R + Sbjct: 334 D--SATLKEIKSIIEQRKQ 350
>YR034_MIMIV (Q5UPB0) Hypothetical protein R34| Length = 409 Score = 29.3 bits (64), Expect = 8.9 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +2 Query: 164 NFYSIVCWINYLPTNIWMVGPCFSARTC 247 N+Y+I CW YL + I+ S R+C Sbjct: 120 NYYNITCWNYYLQSKIFRYSDLSSIRSC 147
>A6_DROME (O46341) Protein a6| Length = 409 Score = 29.3 bits (64), Expect = 8.9 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = -2 Query: 508 SPFSLFDSARPVSIKLLPLVSALEACLTFLSTESNALTPETLRLSVISSNGF*TS 344 +P + ++ V++ L+P S CLT +S P+ R S +SNGF T+ Sbjct: 162 APLTQSETIEEVTVSLVPRTSTTANCLTRVSGH-----PKPCRASTAASNGFATA 211
>PGCA_CHICK (P07898) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2109 Score = 29.3 bits (64), Expect = 8.9 Identities = 19/55 (34%), Positives = 31/55 (56%) Frame = -2 Query: 295 GSLMGGPEIRTEISGITGSSGKAWADHPNVGGQVINPTDNAIEIAHLFQLNEFPF 131 G G PE+ E SG+ G SG+A+ + P + G+ T+ + E + L +L+ PF Sbjct: 1007 GEQSGVPELSGEHSGVPGLSGEAF-EVPELSGEHSGVTELSGEHSGLPELSGEPF 1060
>PTOCB_ECOLI (P19642) PTS system maltose- and glucose-specific EIICB component| [Includes: Maltose and glucose permease IIC component (PTS system maltose- and glucose-specific EIIC component); Maltose- and glucose-specific phosphotransferase enzyme IIB com Length = 530 Score = 29.3 bits (64), Expect = 8.9 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%) Frame = -2 Query: 415 TESNALTPETLRLSVISSNGF*TSRIALLSMGK--AYLNKAPGSLM-----GGPEIRTEI 257 T S ALT +LS +++GF S LS GK A+L PG+ + PE R +I Sbjct: 262 TVSGALTIFQAQLSCPTTHGFSESATRFLSQGKMPAFLGGLPGAALAMYHCARPENRHKI 321 Query: 256 SGI 248 G+ Sbjct: 322 KGL 324
>ILVH_GUITH (O78451) Acetolactate synthase small subunit (EC 2.2.1.6) (AHAS)| (Acetohydroxy-acid synthase small subunit) (ALS) Length = 169 Score = 29.3 bits (64), Expect = 8.9 Identities = 17/58 (29%), Positives = 29/58 (50%) Frame = +3 Query: 255 DISVLISGPPIKDPGALLRYALPIDNKAIREVQKPLEDITDSLKVSGVRALDSVERNV 428 +I L GP K + + +P D + I ++ K L + + LKV + L +VER + Sbjct: 29 NIESLAVGPTEKLGISRITMVVPSDERTIEQLTKQLYKLVNILKVEDITNLPTVEREL 86 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,684,275 Number of Sequences: 219361 Number of extensions: 1288120 Number of successful extensions: 3869 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3791 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3868 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
