ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal17n10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482125.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1522 Score = 377 bits (190), Expect = e-101 Identities = 385/450 (85%) Strand = Plus / Plus Query: 141 tcatttagctggaacaaatgtgcaatttctatagcattgtctgttggattaattacttgc 200 |||||||||||||| ||| |||||||||| ||||||| || | ||||||||| ||| || Sbjct: 192 tcatttagctggaaagaatatgcaatttctgtagcattatcggctggattaatcactggc 251 Query: 201 ccaccaacatttggatggtcggcccatgcttttccgctcgaacctgtaatccctgatatt 260 ||||||| || |||||| | || ||||||| ||| || ||||| || ||||| ||| || Sbjct: 252 gcaccaacgttaggatggccagcacatgcttctcctcttgaaccagtgatcccagatgtt 311 Query: 261 tcagttctgatttctggacctcccattaaagatccaggggctttgttgagatatgctttg 320 |||||| |||| ||||||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 312 tcagttttgatctctggacctcccattaaagatcctggtgctttattgagatatgctttg 371 Query: 321 cccatagataataaagctattcgtgaagttcaaaaaccgttagaggatatcaccgatagt 380 || ||||||||||||||| ||||||||||||||||||| ||||||||||||| || ||| Sbjct: 372 ccaatagataataaagctgttcgtgaagttcaaaaaccactagaggatatcactgacagt 431 Query: 381 ctcaaagtttctggtgttagagcgttggattcagttgaaagaaatgtgaggcaggcctcg 440 || || || ||||||||||||| ||||||||||||||||||||||| || || || ||| Sbjct: 432 cttaagattgctggtgttagagccttggattcagttgaaagaaatgtaagacaagcatcg 491 Query: 441 agagcgctgactaatgggaggagtttaatacttactggtcttgctgaatcaaaaagagaa 500 || || |||| ||||||||||| |||| ||| |||||||||||||| ||||||| | Sbjct: 492 agggcactgagtaatgggaggaacctaattcttggcggtcttgctgaatccaaaagagca 551 Query: 501 aatggagaaaaaatattggataaattagctgttggacttgaagagcttcaacgaattatt 560 ||||| || || ||||||||||||| |||||||||||||| ||||||||||| ||| || Sbjct: 552 aatggggaggaattattggataaattggctgttggacttgatgagcttcaacggattgtt 611 Query: 561 gaggatagaaacaggaatgcggtagctcca 590 ||||| ||||||||| |||| ||||||||| Sbjct: 612 gaggacagaaacagggatgcagtagctcca 641
>dbj|AK099874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G22, full insert sequence Length = 1523 Score = 377 bits (190), Expect = e-101 Identities = 385/450 (85%) Strand = Plus / Plus Query: 141 tcatttagctggaacaaatgtgcaatttctatagcattgtctgttggattaattacttgc 200 |||||||||||||| ||| |||||||||| ||||||| || | ||||||||| ||| || Sbjct: 193 tcatttagctggaaagaatatgcaatttctgtagcattatcggctggattaatcactggc 252 Query: 201 ccaccaacatttggatggtcggcccatgcttttccgctcgaacctgtaatccctgatatt 260 ||||||| || |||||| | || ||||||| ||| || ||||| || ||||| ||| || Sbjct: 253 gcaccaacgttaggatggccagcacatgcttctcctcttgaaccagtgatcccagatgtt 312 Query: 261 tcagttctgatttctggacctcccattaaagatccaggggctttgttgagatatgctttg 320 |||||| |||| ||||||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 313 tcagttttgatctctggacctcccattaaagatcctggtgctttattgagatatgctttg 372 Query: 321 cccatagataataaagctattcgtgaagttcaaaaaccgttagaggatatcaccgatagt 380 || ||||||||||||||| ||||||||||||||||||| ||||||||||||| || ||| Sbjct: 373 ccaatagataataaagctgttcgtgaagttcaaaaaccactagaggatatcactgacagt 432 Query: 381 ctcaaagtttctggtgttagagcgttggattcagttgaaagaaatgtgaggcaggcctcg 440 || || || ||||||||||||| ||||||||||||||||||||||| || || || ||| Sbjct: 433 cttaagattgctggtgttagagccttggattcagttgaaagaaatgtaagacaagcatcg 492 Query: 441 agagcgctgactaatgggaggagtttaatacttactggtcttgctgaatcaaaaagagaa 500 || || |||| ||||||||||| |||| ||| |||||||||||||| ||||||| | Sbjct: 493 agggcactgagtaatgggaggaacctaattcttggcggtcttgctgaatccaaaagagca 552 Query: 501 aatggagaaaaaatattggataaattagctgttggacttgaagagcttcaacgaattatt 560 ||||| || || ||||||||||||| |||||||||||||| ||||||||||| ||| || Sbjct: 553 aatggggaggaattattggataaattggctgttggacttgatgagcttcaacggattgtt 612 Query: 561 gaggatagaaacaggaatgcggtagctcca 590 ||||| ||||||||| |||| ||||||||| Sbjct: 613 gaggacagaaacagggatgcagtagctcca 642
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 258 bits (130), Expect = 2e-65 Identities = 244/282 (86%) Strand = Plus / Plus Query: 141 tcatttagctggaacaaatgtgcaatttctatagcattgtctgttggattaattacttgc 200 |||||||||||||| ||| |||||||||| ||||||| || | ||||||||| ||| || Sbjct: 18014108 tcatttagctggaaagaatatgcaatttctgtagcattatcggctggattaatcactggc 18014167 Query: 201 ccaccaacatttggatggtcggcccatgcttttccgctcgaacctgtaatccctgatatt 260 ||||||| || |||||| | || ||||||| ||| || ||||| || ||||| ||| || Sbjct: 18014168 gcaccaacgttaggatggccagcacatgcttctcctcttgaaccagtgatcccagatgtt 18014227 Query: 261 tcagttctgatttctggacctcccattaaagatccaggggctttgttgagatatgctttg 320 |||||| |||| ||||||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 18014228 tcagttttgatctctggacctcccattaaagatcctggtgctttattgagatatgctttg 18014287 Query: 321 cccatagataataaagctattcgtgaagttcaaaaaccgttagaggatatcaccgatagt 380 || ||||||||||||||| ||||||||||||||||||| ||||||||||||| || ||| Sbjct: 18014288 ccaatagataataaagctgttcgtgaagttcaaaaaccactagaggatatcactgacagt 18014347 Query: 381 ctcaaagtttctggtgttagagcgttggattcagttgaaaga 422 || || || ||||||||||||| |||||||||||||||||| Sbjct: 18014348 cttaagattgctggtgttagagccttggattcagttgaaaga 18014389 Score = 123 bits (62), Expect = 7e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 477 ggtcttgctgaatcaaaaagagaaaatggagaaaaaatattggataaattagctgttgga 536 |||||||||||||| ||||||| |||||| || || ||||||||||||| ||||||||| Sbjct: 18014605 ggtcttgctgaatccaaaagagcaaatggggaggaattattggataaattggctgttgga 18014664 Query: 537 cttgaagagcttcaacgaattattgaggatagaaacaggaatgcggtagctcca 590 ||||| ||||||||||| ||| ||||||| ||||||||| |||| ||||||||| Sbjct: 18014665 cttgatgagcttcaacggattgttgaggacagaaacagggatgcagtagctcca 18014718
>dbj|AP005489.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0013H03 Length = 152998 Score = 258 bits (130), Expect = 2e-65 Identities = 244/282 (86%) Strand = Plus / Plus Query: 141 tcatttagctggaacaaatgtgcaatttctatagcattgtctgttggattaattacttgc 200 |||||||||||||| ||| |||||||||| ||||||| || | ||||||||| ||| || Sbjct: 99143 tcatttagctggaaagaatatgcaatttctgtagcattatcggctggattaatcactggc 99202 Query: 201 ccaccaacatttggatggtcggcccatgcttttccgctcgaacctgtaatccctgatatt 260 ||||||| || |||||| | || ||||||| ||| || ||||| || ||||| ||| || Sbjct: 99203 gcaccaacgttaggatggccagcacatgcttctcctcttgaaccagtgatcccagatgtt 99262 Query: 261 tcagttctgatttctggacctcccattaaagatccaggggctttgttgagatatgctttg 320 |||||| |||| ||||||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 99263 tcagttttgatctctggacctcccattaaagatcctggtgctttattgagatatgctttg 99322 Query: 321 cccatagataataaagctattcgtgaagttcaaaaaccgttagaggatatcaccgatagt 380 || ||||||||||||||| ||||||||||||||||||| ||||||||||||| || ||| Sbjct: 99323 ccaatagataataaagctgttcgtgaagttcaaaaaccactagaggatatcactgacagt 99382 Query: 381 ctcaaagtttctggtgttagagcgttggattcagttgaaaga 422 || || || ||||||||||||| |||||||||||||||||| Sbjct: 99383 cttaagattgctggtgttagagccttggattcagttgaaaga 99424 Score = 123 bits (62), Expect = 7e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 477 ggtcttgctgaatcaaaaagagaaaatggagaaaaaatattggataaattagctgttgga 536 |||||||||||||| ||||||| |||||| || || ||||||||||||| ||||||||| Sbjct: 99640 ggtcttgctgaatccaaaagagcaaatggggaggaattattggataaattggctgttgga 99699 Query: 537 cttgaagagcttcaacgaattattgaggatagaaacaggaatgcggtagctcca 590 ||||| ||||||||||| ||| ||||||| ||||||||| |||| ||||||||| Sbjct: 99700 cttgatgagcttcaacggattgttgaggacagaaacagggatgcagtagctcca 99753
>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1090H08 Length = 200720 Score = 258 bits (130), Expect = 2e-65 Identities = 244/282 (86%) Strand = Plus / Plus Query: 141 tcatttagctggaacaaatgtgcaatttctatagcattgtctgttggattaattacttgc 200 |||||||||||||| ||| |||||||||| ||||||| || | ||||||||| ||| || Sbjct: 17904 tcatttagctggaaagaatatgcaatttctgtagcattatcggctggattaatcactggc 17963 Query: 201 ccaccaacatttggatggtcggcccatgcttttccgctcgaacctgtaatccctgatatt 260 ||||||| || |||||| | || ||||||| ||| || ||||| || ||||| ||| || Sbjct: 17964 gcaccaacgttaggatggccagcacatgcttctcctcttgaaccagtgatcccagatgtt 18023 Query: 261 tcagttctgatttctggacctcccattaaagatccaggggctttgttgagatatgctttg 320 |||||| |||| ||||||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 18024 tcagttttgatctctggacctcccattaaagatcctggtgctttattgagatatgctttg 18083 Query: 321 cccatagataataaagctattcgtgaagttcaaaaaccgttagaggatatcaccgatagt 380 || ||||||||||||||| ||||||||||||||||||| ||||||||||||| || ||| Sbjct: 18084 ccaatagataataaagctgttcgtgaagttcaaaaaccactagaggatatcactgacagt 18143 Query: 381 ctcaaagtttctggtgttagagcgttggattcagttgaaaga 422 || || || ||||||||||||| |||||||||||||||||| Sbjct: 18144 cttaagattgctggtgttagagccttggattcagttgaaaga 18185 Score = 123 bits (62), Expect = 7e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 477 ggtcttgctgaatcaaaaagagaaaatggagaaaaaatattggataaattagctgttgga 536 |||||||||||||| ||||||| |||||| || || ||||||||||||| ||||||||| Sbjct: 18401 ggtcttgctgaatccaaaagagcaaatggggaggaattattggataaattggctgttgga 18460 Query: 537 cttgaagagcttcaacgaattattgaggatagaaacaggaatgcggtagctcca 590 ||||| ||||||||||| ||| ||||||| ||||||||| |||| ||||||||| Sbjct: 18461 cttgatgagcttcaacggattgttgaggacagaaacagggatgcagtagctcca 18514
>gb|AF030709.1|AF030709 Pisum sativum poly(A) polymerase mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1668 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/130 (82%) Strand = Plus / Plus Query: 268 tgatttctggacctcccattaaagatccaggggctttgttgagatatgctttgcccatag 327 |||| |||||||| || ||||| || || ||||| ||||||||||||||| | || || | Sbjct: 339 tgatatctggaccgccgattaaggaccccggggcattgttgagatatgctcttcctattg 398 Query: 328 ataataaagctattcgtgaagttcaaaaaccgttagaggatatcaccgatagtctcaaag 387 | ||||| || ||| | ||||| ||||||||| |||| ||||| || ||||||||||| Sbjct: 399 acaataaggcgattagagaagtgcaaaaaccgctagaagatattacagatagtctcaaga 458 Query: 388 tttctggtgt 397 |||||||||| Sbjct: 459 tttctggtgt 468
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 490 caaaaagagaaaatggagaaaaaat 514 ||||||||||||||||||||||||| Sbjct: 1190875 caaaaagagaaaatggagaaaaaat 1190899
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 490 caaaaagagaaaatggagaaaaaat 514 ||||||||||||||||||||||||| Sbjct: 1167446 caaaaagagaaaatggagaaaaaat 1167470
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 490 caaaaagagaaaatggagaaaaaat 514 ||||||||||||||||||||||||| Sbjct: 1167338 caaaaagagaaaatggagaaaaaat 1167362
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 490 caaaaagagaaaatggagaaaaaat 514 ||||||||||||||||||||||||| Sbjct: 1167324 caaaaagagaaaatggagaaaaaat 1167348
>emb|CR713406.2|CNS0GDEY Tetraodon nigroviridis full-length cDNA Length = 784 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||||||||||||||||||||| Sbjct: 406 cctcctcccgctgctgccgccgcc 429
>ref|XM_417317.1| PREDICTED: Gallus gallus similar to KIAA1688 protein (LOC419132), mRNA Length = 5814 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 41 gctcgcctcctcccgctgctgcc 63 ||||||||||||||||||||||| Sbjct: 38 gctcgcctcctcccgctgctgcc 60
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 tatagcattgtctgttggatta 191 |||||||||||||||||||||| Sbjct: 33787 tatagcattgtctgttggatta 33766
>emb|BX942819.18| Zebrafish DNA sequence from clone CH211-197E10 in linkage group 23, complete sequence Length = 141473 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 486 gaatcaaaaagagaaaatggagaaaaaata 515 |||| ||||| ||||||||||||||||||| Sbjct: 62322 gaattaaaaaaagaaaatggagaaaaaata 62351
>emb|BX927290.22| Zebrafish DNA sequence from clone CH211-212K5 in linkage group 14, complete sequence Length = 222032 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 486 gaatcaaaaagagaaaatggagaaaaaata 515 |||| ||||| ||||||||||||||||||| Sbjct: 38151 gaattaaaaaaagaaaatggagaaaaaata 38122
>emb|CR759843.7| Zebrafish DNA sequence from clone DKEYP-82B4 in linkage group 22, complete sequence Length = 190165 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 486 gaatcaaaaagagaaaatggagaaaaaata 515 |||| ||||| ||||||||||||||||||| Sbjct: 117936 gaattaaaaaaagaaaatggagaaaaaata 117907
>emb|BX901980.12| Zebrafish DNA sequence from clone CH211-258F1 in linkage group 22, complete sequence Length = 163109 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 486 gaatcaaaaagagaaaatggagaaaaaata 515 |||| ||||| ||||||||||||||||||| Sbjct: 69164 gaattaaaaaaagaaaatggagaaaaaata 69135
>emb|BX935335.2| Gallus gallus finished cDNA, clone ChEST959l17 Length = 904 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 cgcctcctcccgctgctgccgccgcc 69 |||||||||||||||| ||||||||| Sbjct: 45 cgcctcctcccgctgccgccgccgcc 20
>gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228481 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 tatagcattgtctgttggatta 191 |||||||||||||||||||||| Sbjct: 213607 tatagcattgtctgttggatta 213586
>gb|AF336133.1|AF336133 Homo sapiens CECR2 protein (CECR2) mRNA, complete cds Length = 6178 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 ctcctcccgctgctgccgccgc 68 |||||||||||||||||||||| Sbjct: 300 ctcctcccgctgctgccgccgc 279
>emb|BX932256.2| Gallus gallus finished cDNA, clone ChEST356a18 Length = 798 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 44 cgcctcctcccgctgctgccgccgcc 69 |||||||||||||||| ||||||||| Sbjct: 47 cgcctcctcccgctgccgccgccgcc 22
>gb|AC151264.2| Mus musculus BAC clone RP24-347M6 from 17, complete sequence Length = 153677 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 atttctatagcattgtctgttg 186 |||||||||||||||||||||| Sbjct: 53456 atttctatagcattgtctgttg 53477
>emb|BX004879.21| Zebrafish DNA sequence from clone CH211-157L7 in linkage group 22, complete sequence Length = 195947 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 486 gaatcaaaaagagaaaatggagaaaaaata 515 |||| ||||| ||||||||||||||||||| Sbjct: 77255 gaattaaaaaaagaaaatggagaaaaaata 77284 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 486 gaatcaaaaagagaaaatggagaaaaaata 515 |||| ||||| ||||||||||||||||||| Sbjct: 9526 gaattaaaaaaagaaaatggagaaaaaata 9555
>emb|CR854899.16| Zebrafish DNA sequence from clone CH211-268B14 in linkage group 14, complete sequence Length = 142230 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 486 gaatcaaaaagagaaaatggagaaaaaata 515 |||| ||||| ||||||||||||||||||| Sbjct: 60024 gaattaaaaaaagaaaatggagaaaaaata 59995
>emb|BX571878.20| Zebrafish DNA sequence from clone DKEY-265E7 in linkage group 14, complete sequence Length = 177362 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 486 gaatcaaaaagagaaaatggagaaaaaata 515 |||| ||||| ||||||||||||||||||| Sbjct: 9456 gaattaaaaaaagaaaatggagaaaaaata 9427
>emb|AL929029.7| Zebrafish DNA sequence from clone CH211-15F21, complete sequence Length = 192579 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 486 gaatcaaaaagagaaaatggagaaaaaata 515 |||| ||||| ||||||||||||||||||| Sbjct: 38762 gaattaaaaaaagaaaatggagaaaaaata 38791
>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0081F16 map E50055S, complete sequence Length = 148220 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cctcctcccgctgctgccgcc 66 ||||||||||||||||||||| Sbjct: 119400 cctcctcccgctgctgccgcc 119420
>gb|BC076995.1| Xenopus tropicalis MGC89624 protein, mRNA (cDNA clone MGC:89624 IMAGE:6995502), complete cds Length = 4290 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ccgctgctgccgccgcccttc 73 ||||||||||||||||||||| Sbjct: 2933 ccgctgctgccgccgcccttc 2913
>ref|XM_588864.2| PREDICTED: Bos taurus similar to mammalian retrotransposon derived 8b (LOC511516), mRNA Length = 1228 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tcccgctgctgccgccgccct 71 ||||||||||||||||||||| Sbjct: 587 tcccgctgctgccgccgccct 607
>ref|XM_957058.1| Neurospora crassa OR74A hypothetical protein (NCU07297.1) partial mRNA Length = 1818 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 gcctcctcccgctgctgccgccgcc 69 ||||||| ||||||||||||||||| Sbjct: 624 gcctcctgccgctgctgccgccgcc 648
>ref|XM_327582.1| Neurospora crassa OR74A hypothetical protein (NCU07297.1) partial mRNA Length = 1818 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 45 gcctcctcccgctgctgccgccgcc 69 ||||||| ||||||||||||||||| Sbjct: 624 gcctcctgccgctgctgccgccgcc 648
>ref|NM_002581.3| Homo sapiens pregnancy-associated plasma protein A, pappalysin 1 (PAPPA), mRNA Length = 11025 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cctcccgctgctgccgccgcc 69 ||||||||||||||||||||| Sbjct: 628 cctcccgctgctgccgccgcc 608
>gb|BC116150.1| Bos taurus cDNA clone MGC:140692 IMAGE:8275199, complete cds Length = 1224 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 tcccgctgctgccgccgccct 71 ||||||||||||||||||||| Sbjct: 581 tcccgctgctgccgccgccct 601
>gb|AC011809.2| Arabidopsis thaliana chromosome I BAC F6A14 genomic sequence, complete sequence Length = 108767 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 cttgcccaccaacatttggatggtc 220 |||| |||||||||||||||||||| Sbjct: 71066 cttgaccaccaacatttggatggtc 71090
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 490 caaaaagagaaaatggagaaaaaat 514 ||||||||||||| ||||||||||| Sbjct: 1198901 caaaaagagaaaacggagaaaaaat 1198925
>emb|AL691426.9| Human DNA sequence from clone RP11-787B4 on chromosome 9 Contains the 5' end of the PAPPA gene for pregnancy-associated plasma protein A, a novel gene and a CpG island, complete sequence Length = 182777 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cctcccgctgctgccgccgcc 69 ||||||||||||||||||||| Sbjct: 170423 cctcccgctgctgccgccgcc 170403
>emb|AL390777.13| Human DNA sequence from clone RP11-301F14 on chromosome 9 Contains the 5' end of the NTRK2 gene for Neurotrophic tyrosine kinase, receptor, type 2 (TRKB) and a CpG island, complete sequence Length = 182914 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 aaaagagaaaatggagaaaaa 512 ||||||||||||||||||||| Sbjct: 50351 aaaagagaaaatggagaaaaa 50331
>gb|AC093903.3| Homo sapiens BAC clone RP11-733C7 from 4, complete sequence Length = 161280 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 488 atcaaaaagagaaaatggagaaaaa 512 |||||| |||||||||||||||||| Sbjct: 80654 atcaaagagagaaaatggagaaaaa 80678
>gb|AC011339.5| Homo sapiens chromosome 5 clone CTC-260J12, complete sequence Length = 152560 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 agcattgtctgttggattaat 193 ||||||||||||||||||||| Sbjct: 127886 agcattgtctgttggattaat 127906
>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome Length = 2174500 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 agaaaatggagaaaaaatatt 517 ||||||||||||||||||||| Sbjct: 1333620 agaaaatggagaaaaaatatt 1333640
>gb|AC134913.6| Mus musculus BAC clone RP23-195M6 from chromosome 13, complete sequence Length = 223130 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 484 ctgaatcaaaaagagaaaatg 504 ||||||||||||||||||||| Sbjct: 81654 ctgaatcaaaaagagaaaatg 81674
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cctcctcccgctgctgccgcc 66 ||||||||||||||||||||| Sbjct: 3114030 cctcctcccgctgctgccgcc 3114050
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 492 aaaagagaaaatggagaaaaaatattgga 520 |||||| |||| ||||||||||||||||| Sbjct: 105033 aaaagaaaaaaaggagaaaaaatattgga 105061
>emb|BX814066.1|CNS0ADRF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB55ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1565 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 196 cttgcccaccaacatttggatggtc 220 |||| |||||||||||||||||||| Sbjct: 905 cttgaccaccaacatttggatggtc 929
>ref|NM_001005076.1| Xenopus tropicalis MGC89624 protein (MGC89624), mRNA Length = 4290 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ccgctgctgccgccgcccttc 73 ||||||||||||||||||||| Sbjct: 2933 ccgctgctgccgccgcccttc 2913
>gb|AC116917.2| Homo sapiens chromosome 5 clone RP11-756G12, complete sequence Length = 165764 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 agcattgtctgttggattaat 193 ||||||||||||||||||||| Sbjct: 69537 agcattgtctgttggattaat 69557
>gb|AC023696.4| Drosophila melanogaster X BAC RP98-17J10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174367 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 aatcaaaaagagaaaatggagaaaa 511 |||||||| |||||||||||||||| Sbjct: 145339 aatcaaaacgagaaaatggagaaaa 145363
>gb|AC023743.4| Drosophila melanogaster X BAC RP98-40O10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185405 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 aatcaaaaagagaaaatggagaaaa 511 |||||||| |||||||||||||||| Sbjct: 22748 aatcaaaacgagaaaatggagaaaa 22772
>ref|XM_306462.2| Anopheles gambiae str. PEST ENSANGP00000001699 (ENSANGG00000001418), partial mRNA Length = 483 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gcggcgctcgcctcctcccgc 56 ||||||||||||||||||||| Sbjct: 382 gcggcgctcgcctcctcccgc 402
>gb|AC158127.3| Mus musculus chromosome 19, clone RP23-135N12, complete sequence Length = 217544 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 493 aaagagaaaatggagaaaaaa 513 ||||||||||||||||||||| Sbjct: 118767 aaagagaaaatggagaaaaaa 118787
>gb|AC111065.20| Mus musculus chromosome 19, clone RP23-315E4, complete sequence Length = 193977 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 493 aaagagaaaatggagaaaaaa 513 ||||||||||||||||||||| Sbjct: 160714 aaagagaaaatggagaaaaaa 160694
>gb|AE003444.3| Drosophila melanogaster chromosome X, section 28 of 74 of the complete sequence Length = 299633 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 aatcaaaaagagaaaatggagaaaa 511 |||||||| |||||||||||||||| Sbjct: 139793 aatcaaaacgagaaaatggagaaaa 139817
>dbj|AP006256.1| Homo sapiens genomic DNA, chromosome 9, clone:RP11-433N8, complete sequence Length = 198664 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cctcccgctgctgccgccgcc 69 ||||||||||||||||||||| Sbjct: 24868 cctcccgctgctgccgccgcc 24848
>gb|U28727.1|HSU28727 Human pregnancy-associated plasma protein-A preproform (PAPPA) mRNA, complete cds Length = 8400 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cctcccgctgctgccgccgcc 69 ||||||||||||||||||||| Sbjct: 3458 cctcccgctgctgccgccgcc 3438
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cctcctcccgctgctgccgcc 66 ||||||||||||||||||||| Sbjct: 3123061 cctcctcccgctgctgccgcc 3123081
>gb|BC078657.1| Homo sapiens pregnancy-associated plasma protein A, pappalysin 1, mRNA (cDNA clone MGC:87189 IMAGE:30340336), complete cds Length = 6773 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cctcccgctgctgccgccgcc 69 ||||||||||||||||||||| Sbjct: 258 cctcccgctgctgccgccgcc 238
>emb|AL672249.6| Mouse DNA sequence from clone RP23-92P11 on chromosome X, complete sequence Length = 191671 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 aaaagagaaaatggagaaaaa 512 ||||||||||||||||||||| Sbjct: 14559 aaaagagaaaatggagaaaaa 14579
>gb|AC166798.3| Mus musculus chromosome 3, clone RP23-442J19, complete sequence Length = 216754 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 gagaaaatggagaaaaaata 515 |||||||||||||||||||| Sbjct: 89864 gagaaaatggagaaaaaata 89883
>gb|DQ166519.1| Fagus sylvatica putative 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1 mRNA, partial cds Length = 841 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 ctgatttctggacctcccat 286 |||||||||||||||||||| Sbjct: 373 ctgatttctggacctcccat 392
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 cctcctcccgctgctgccgccgcc 69 ||||||||||| |||||||||||| Sbjct: 142881 cctcctcccgccgctgccgccgcc 142904
>gb|BC051905.1| Homo sapiens zinc finger protein 281, mRNA (cDNA clone MGC:60368 IMAGE:6165292), complete cds Length = 3047 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||| ||||||||||||||||| Sbjct: 133 cctcctgccgctgctgccgccgcc 110
>gb|AE010443.1| Methanopyrus kandleri AV19 section 142 of 157 of the complete genome Length = 10110 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 ggccgcggcgctcgcctcctcccg 55 ||||||||||||||| |||||||| Sbjct: 6228 ggccgcggcgctcgcgtcctcccg 6251
>ref|NM_001031097.1| Gallus gallus RAB10, member RAS oncogene family (RAB10), mRNA Length = 3247 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 atcaaaaagagaaaatggagaaaa 511 ||||||||| |||||||||||||| Sbjct: 2433 atcaaaaagggaaaatggagaaaa 2456
>ref|XM_518378.1| PREDICTED: Pan troglodytes similar to Pre-B-cell leukemia transcription factor-2 (Homeobox protein PBX2) (G17 protein) (LOC462585), mRNA Length = 3345 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cctcccattaaagatccagg 298 |||||||||||||||||||| Sbjct: 2713 cctcccattaaagatccagg 2732
>ref|NM_205231.1| Gallus gallus neurotrophic tyrosine kinase, receptor, type 2 (NTRK2), mRNA Length = 3201 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 ||||||||||||||||| |||||| Sbjct: 319 cctcctcccgctgctgctgccgcc 296
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 ||||||||||| |||||||||||| Sbjct: 126470 cctcctcccgccgctgccgccgcc 126447
>gb|AC164423.2| Mus musculus chromosome 3, clone RP24-361M10, complete sequence Length = 151556 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 gagaaaatggagaaaaaata 515 |||||||||||||||||||| Sbjct: 67572 gagaaaatggagaaaaaata 67591
>gb|AC078891.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0092N12, complete sequence Length = 109198 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 22 ccaaccgcatggccgcggcgctcgcctcctcc 53 |||||||| | ||||| ||||||||||||||| Sbjct: 102576 ccaaccgcctcgccgccgcgctcgcctcctcc 102607
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 ||||||||||| |||||||||||| Sbjct: 30821 cctcctcccgccgctgccgccgcc 30798
>ref|XM_458945.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D12122g) partial mRNA Length = 1515 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cagttctgatttctggacct 281 |||||||||||||||||||| Sbjct: 289 cagttctgatttctggacct 270
>ref|XM_957966.1| Neurospora crassa OR74A hypothetical protein (NCU05697.1) partial mRNA Length = 2166 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ctcccgctgctgccgccgcc 69 |||||||||||||||||||| Sbjct: 986 ctcccgctgctgccgccgcc 1005
>ref|XM_325551.1| Neurospora crassa OR74A hypothetical protein (NCU05697.1) partial mRNA Length = 2166 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ctcccgctgctgccgccgcc 69 |||||||||||||||||||| Sbjct: 986 ctcccgctgctgccgccgcc 1005
>ref|XM_709904.1| Candida albicans SC5314 pyruvate kinase (CaO19.11059), mRNA Length = 1515 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cagttctgatttctggacct 281 |||||||||||||||||||| Sbjct: 289 cagttctgatttctggacct 270
>ref|XM_709841.1| Candida albicans SC5314 hypothetical protein (CaO19.3575), mRNA Length = 1515 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 cagttctgatttctggacct 281 |||||||||||||||||||| Sbjct: 289 cagttctgatttctggacct 270
>gb|AC146408.3| Pan troglodytes BAC clone RP43-41L7 from 7, complete sequence Length = 198021 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 aaagagaaaatggagaaaaa 512 |||||||||||||||||||| Sbjct: 187117 aaagagaaaatggagaaaaa 187136
>gb|AC122363.4| Mus musculus BAC clone RP23-437C1 from chromosome 19, complete sequence Length = 180129 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gcaatttctatagcattgtc 181 |||||||||||||||||||| Sbjct: 113467 gcaatttctatagcattgtc 113486
>ref|NM_012482.3| Homo sapiens zinc finger protein 281 (ZNF281), mRNA Length = 3535 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||| ||||||||||||||||| Sbjct: 224 cctcctgccgctgctgccgccgcc 201
>gb|DQ100365.1| Ambystoma mexicanum homeodomain transcription factor Meis2a mRNA, complete cds Length = 1306 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 gcttttccgctcgaacctgt 247 |||||||||||||||||||| Sbjct: 503 gcttttccgctcgaacctgt 484
>ref|XM_549297.2| PREDICTED: Canis familiaris similar to CG4768-PA, transcript variant 1 (LOC492177), mRNA Length = 843 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 cggcgctcgcctcctcccgc 56 |||||||||||||||||||| Sbjct: 133 cggcgctcgcctcctcccgc 114
>gb|AC148932.3| Pan troglodytes BAC clone CH251-571G8 from chromosome 7, complete sequence Length = 232604 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 aaagagaaaatggagaaaaa 512 |||||||||||||||||||| Sbjct: 121302 aaagagaaaatggagaaaaa 121321
>gb|AY386264.1| Orf virus strain OV-SA00, complete genome Length = 139962 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ctcccgctgctgccgccgcc 69 |||||||||||||||||||| Sbjct: 13669 ctcccgctgctgccgccgcc 13650
>gb|AY386263.1| Orf virus strain OV-IA82, complete genome Length = 137241 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ctcccgctgctgccgccgcc 69 |||||||||||||||||||| Sbjct: 12458 ctcccgctgctgccgccgcc 12439
>gb|AC127315.4| Mus musculus BAC clone RP23-218F21 from chromosome 8, complete sequence Length = 207577 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 atggagaaaaaatattggat 521 |||||||||||||||||||| Sbjct: 27362 atggagaaaaaatattggat 27343
>gb|AC130843.3| Mus musculus BAC clone RP24-501N9 from chromosome 1, complete sequence Length = 141921 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 ||||||||||| |||||||||||| Sbjct: 112567 cctcctcccgccgctgccgccgcc 112544
>gb|AC139296.4| Mus musculus BAC clone RP24-131C5 from chromosome 18, complete sequence Length = 165703 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 ttggacttgaagagcttcaa 551 |||||||||||||||||||| Sbjct: 103094 ttggacttgaagagcttcaa 103075
>gb|AC111096.15| Mus musculus chromosome 3, clone RP23-174B18, complete sequence Length = 209936 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 agttctgatttctggacctc 282 |||||||||||||||||||| Sbjct: 181787 agttctgatttctggacctc 181768
>ref|NG_000839.1| Homo sapiens cystatin locus (CST@) on chromosome 20 Length = 477159 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 491 aaaaagagaaaatggagaaaaaat 514 ||||| |||||||||||||||||| Sbjct: 50750 aaaaaaagaaaatggagaaaaaat 50773
>ref|XM_646352.1| Entamoeba histolytica HM-1:IMSS amino acid transporter, putative (165.t00001) partial mRNA Length = 2103 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 492 aaaagagaaaatggagaaaaaata 515 |||||||||||||||||| ||||| Sbjct: 205 aaaagagaaaatggagaagaaata 228
>ref|XM_724346.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01647) partial mRNA Length = 9850 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 489 tcaaaaagagaaaatggagaaaaa 512 |||||||||||||| ||||||||| Sbjct: 7472 tcaaaaagagaaaaaggagaaaaa 7449
>emb|AL031005.2|HS329E20 Human DNA sequence from clone RP3-329E20 on chromosome 1p34.4-36.13 Contains the 5' UTR of the EIF4G3 gene for eukaryotic translation initiation factor 4 gamma, 3, the 3' end of the ECE1 gene for endothelin converting enzyme 1, a novel gene and a CpG island, complete sequence Length = 109906 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 cctgatatttcagttctgat 271 |||||||||||||||||||| Sbjct: 29373 cctgatatttcagttctgat 29392
>emb|Z83846.1|HS415G2 Human DNA sequence from clone CTA-415G2 on chromosome 22 Contains the 5' end of the SYN3 gene for Synapsin III, a novel pseudogene and a CpG island, complete sequence Length = 129957 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 aatcaaaaagagaaaatgga 506 |||||||||||||||||||| Sbjct: 13125 aatcaaaaagagaaaatgga 13106
>emb|AL591074.10| Human DNA sequence from clone XXyac-60D10 on chromosome 20 Contains the CST5 gene for cystatin D, the CST2 gene for cystatin SA, the CST1 gene for cystatin SN and the CSTP2 gene for cystatin pseudogene 2, complete sequence Length = 203076 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 491 aaaaagagaaaatggagaaaaaat 514 ||||| |||||||||||||||||| Sbjct: 155962 aaaaaaagaaaatggagaaaaaat 155939
>emb|AL359997.8| Human DNA sequence from clone RP11-71A24 on chromosome 9 Contains the 5' end of the ALDH1A1 gene for member A1 of the aldehyde dehydrogenase 1 family, a cytochrome P450 family 1 subfamily A polypeptide 1 (CYP1A1) pseudogene and the ANXA1 gene for annexin I, complete sequence Length = 169102 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 agaaaatggagaaaaaatat 516 |||||||||||||||||||| Sbjct: 82172 agaaaatggagaaaaaatat 82153
>gb|AE014836.1| Plasmodium falciparum 3D7 chromosome 11 section 1 of 8 of the complete sequence Length = 250743 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 489 tcaaaaagagaaaatggagaaaaa 512 ||||||||| |||||||||||||| Sbjct: 70846 tcaaaaagataaaatggagaaaaa 70823
>gb|AC116320.5| Mus musculus chromosome 18 clone RP23-269B16, complete sequence Length = 195630 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 ttggacttgaagagcttcaa 551 |||||||||||||||||||| Sbjct: 57019 ttggacttgaagagcttcaa 57000
>gb|AC011597.27| Homo sapiens 3 BAC RP11-85F14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 190069 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 aagagaaaatggagaaaaaa 513 |||||||||||||||||||| Sbjct: 5639 aagagaaaatggagaaaaaa 5620
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 22 ccaaccgcatggccgcggcgctcgcctcctcc 53 |||||||| | ||||| ||||||||||||||| Sbjct: 899978 ccaaccgcctcgccgccgcgctcgcctcctcc 899947
>gb|AC096051.7| Rattus norvegicus 10 BAC CH230-21G1 (Children's Hospital Oakland Research Institute) complete sequence Length = 216194 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cgcctcctcccgctgctgcc 63 |||||||||||||||||||| Sbjct: 195439 cgcctcctcccgctgctgcc 195458
>emb|X77251.1|GGTRKBRFL G.gallus trkB receptor mRNA (full length) Length = 3201 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 ||||||||||||||||| |||||| Sbjct: 319 cctcctcccgctgctgctgccgcc 296
>gb|AF263550.5| Homo sapiens chromosome 8 clone SCb-334C17 map 8p21-p11, complete sequence Length = 108541 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ttctgatttctggacctccc 284 |||||||||||||||||||| Sbjct: 22796 ttctgatttctggacctccc 22815
>emb|X77252.1|GGTRKBT G.gallus trkB receptor mRNA (truncated) Length = 1910 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 ||||||||||||||||| |||||| Sbjct: 94 cctcctcccgctgctgctgccgcc 71
>emb|X74109.1|GDTRKB G.domesticus trkB mRNA Length = 2697 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 ||||||||||||||||| |||||| Sbjct: 92 cctcctcccgctgctgctgccgcc 69
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces hansenii Length = 1602771 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 262 cagttctgatttctggacct 281 |||||||||||||||||||| Sbjct: 914297 cagttctgatttctggacct 914316
>gb|BC060820.1| Homo sapiens zinc finger protein 281, mRNA (cDNA clone MGC:71675 IMAGE:30344180), complete cds Length = 3535 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||| ||||||||||||||||| Sbjct: 224 cctcctgccgctgctgccgccgcc 201
>emb|AJ132592.1|HSA132592 Homo sapiens mRNA for zinc finger protein, 3115 BP Length = 3115 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||| ||||||||||||||||| Sbjct: 224 cctcctgccgctgctgccgccgcc 201
>emb|BX511186.13| Zebrafish DNA sequence from clone DKEY-246J23 in linkage group 18, complete sequence Length = 138351 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 502 atggagaaaaaatattggataaattagc 529 |||||||||||||||| | ||||||||| Sbjct: 128591 atggagaaaaaatatttgctaaattagc 128564
>emb|CR931732.2| Medicago truncatula chromosome 5 clone mth2-117e11, COMPLETE SEQUENCE Length = 117393 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 gaaaatggagaaaaaatatt 517 |||||||||||||||||||| Sbjct: 108512 gaaaatggagaaaaaatatt 108493
>emb|AJ720699.1| Gallus gallus mRNA for hypothetical protein, clone 23k10 Length = 3247 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 atcaaaaagagaaaatggagaaaa 511 ||||||||| |||||||||||||| Sbjct: 2433 atcaaaaagggaaaatggagaaaa 2456
>emb|BX530018.8| Zebrafish DNA sequence from clone DKEY-228B21 in linkage group 1, complete sequence Length = 221617 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 491 aaaaagagaaaatggagaaaaaatattg 518 |||||| |||||||| |||||||||||| Sbjct: 105121 aaaaagtgaaaatggtgaaaaaatattg 105094
>gb|AC104320.2| Homo sapiens chromosome 8 clone CTD-2204N4 map 8p21-p11, complete sequence Length = 134133 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 agttctgatttctggacctc 282 |||||||||||||||||||| Sbjct: 13194 agttctgatttctggacctc 13175
>gb|AC175467.3| Pan troglodytes BAC clone CH251-302C22 from chromosome unknown, complete sequence Length = 186532 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 aatcaaaaagagaaaatgga 506 |||||||||||||||||||| Sbjct: 87595 aatcaaaaagagaaaatgga 87576
>gb|AC183302.2| Pan troglodytes BAC clone CH251-258O5 from chromosome unknown, complete sequence Length = 211208 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 aatcaaaaagagaaaatgga 506 |||||||||||||||||||| Sbjct: 12915 aatcaaaaagagaaaatgga 12934
>emb|AJ786651.1| Struthio camelus mRNA for iron binding protein (trfe gene) Length = 2409 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 acctgtaatccctgatattt 261 |||||||||||||||||||| Sbjct: 1870 acctgtaatccctgatattt 1851
>emb|BX649282.8| Zebrafish DNA sequence from clone DKEYP-3F10 in linkage group 11, complete sequence Length = 175316 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cttgcccaccaacatttgga 215 |||||||||||||||||||| Sbjct: 60316 cttgcccaccaacatttgga 60335
>dbj|AK094701.1| Homo sapiens cDNA FLJ37382 fis, clone BRAMY2026091, highly similar to Homo sapiens zinc finger DNA binding protein 99 (ZNF281) mRNA Length = 2932 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||| ||||||||||||||||| Sbjct: 183 cctcctgccgctgctgccgccgcc 160
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12, complete sequence Length = 129420 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 22 ccaaccgcatggccgcggcgctcgcctcctcc 53 |||||||| | ||||| ||||||||||||||| Sbjct: 36204 ccaaccgcctcgccgccgcgctcgcctcctcc 36235
>dbj|AK027284.1| Homo sapiens cDNA FLJ14378 fis, clone HEMBA1001804, highly similar to Homo sapiens zinc finger DNA binding protein 99 (ZNF281) mRNA Length = 1738 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||| ||||||||||||||||| Sbjct: 242 cctcctgccgctgctgccgccgcc 219
>dbj|AK022916.1| Homo sapiens cDNA FLJ12854 fis, clone NT2RP2003480, highly similar to Homo sapiens zinc finger DNA binding protein 99 (ZNF281) mRNA Length = 3046 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||| ||||||||||||||||| Sbjct: 175 cctcctgccgctgctgccgccgcc 152
>gb|AC104461.2| Homo sapiens chromosome 1 clone RP11-469A15, complete sequence Length = 165496 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||| ||||||||||||||||| Sbjct: 96404 cctcctgccgctgctgccgccgcc 96427
>gb|AC099685.2| Homo sapiens chromosome 8, clone RP11-87N16, complete sequence Length = 182413 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agttctgatttctggacctc 282 |||||||||||||||||||| Sbjct: 32254 agttctgatttctggacctc 32273
>gb|AC104562.3| Homo sapiens chromosome 8, clone XX-334C17, complete sequence Length = 108542 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ttctgatttctggacctccc 284 |||||||||||||||||||| Sbjct: 22796 ttctgatttctggacctccc 22815
>gb|AC015584.18| Mus musculus, clone RP23-400H17, complete sequence Length = 214875 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 aatacttactggtcttgctg 486 |||||||||||||||||||| Sbjct: 190668 aatacttactggtcttgctg 190649
>gb|AC020713.7| Homo sapiens BAC clone RP11-439B18 from 4, complete sequence Length = 187350 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 gagaaaatggagaaaaaata 515 |||||||||||||||||||| Sbjct: 151216 gagaaaatggagaaaaaata 151197
>gb|DQ184476.1| Orf virus strain NZ2, complete genome Length = 137820 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ctcccgctgctgccgccgcc 69 |||||||||||||||||||| Sbjct: 12870 ctcccgctgctgccgccgcc 12851
>emb|CR385604.1| Gallus gallus finished cDNA, clone ChEST856i21 Length = 1109 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 atcaaaaagagaaaatggagaaaa 511 ||||||||| |||||||||||||| Sbjct: 230 atcaaaaagggaaaatggagaaaa 253
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence Length = 158050 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ctcccgctgctgccgccgcc 69 |||||||||||||||||||| Sbjct: 89307 ctcccgctgctgccgccgcc 89326
>gb|AC010085.3|AC010085 Homo sapiens BAC clone RP11-168P10 from 7, complete sequence Length = 121912 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 aaagagaaaatggagaaaaa 512 |||||||||||||||||||| Sbjct: 56536 aaagagaaaatggagaaaaa 56517
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 22 ccaaccgcatggccgcggcgctcgcctcctcc 53 |||||||| | ||||| ||||||||||||||| Sbjct: 899978 ccaaccgcctcgccgccgcgctcgcctcctcc 899947
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||||||||||||||| ||||| Sbjct: 23006264 cctcctcccgctgctgccaccgcc 23006241
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 ||||||||||| |||||||||||| Sbjct: 21778412 cctcctcccgccgctgccgccgcc 21778389
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ctcccgctgctgccgccgcc 69 |||||||||||||||||||| Sbjct: 29273323 ctcccgctgctgccgccgcc 29273304
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cctcccgctgctgccgccgc 68 |||||||||||||||||||| Sbjct: 21412392 cctcccgctgctgccgccgc 21412373 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gccgcggcgctcgcctcctcccgc 56 ||||||||| |||||||||||||| Sbjct: 11081296 gccgcggcgatcgcctcctcccgc 11081319
>gb|AC115914.6| Mus musculus chromosome 8, clone RP24-487J5, complete sequence Length = 163170 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 atggagaaaaaatattggat 521 |||||||||||||||||||| Sbjct: 66793 atggagaaaaaatattggat 66774
>gb|AC116667.2| Homo sapiens chromosome 16 clone RP11-346C20, complete sequence Length = 156100 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 46 cctcctcccgctgctgccgccgcc 69 ||||||||||| |||||||||||| Sbjct: 150184 cctcctcccgccgctgccgccgcc 150207
>gb|AC016747.7| Homo sapiens BAC clone RP11-493E12 from 2, complete sequence Length = 152345 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 497 agaaaatggagaaaaaatat 516 |||||||||||||||||||| Sbjct: 74284 agaaaatggagaaaaaatat 74265
>dbj|AP003267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0496H05 Length = 147817 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cctcccgctgctgccgccgc 68 |||||||||||||||||||| Sbjct: 134330 cctcccgctgctgccgccgc 134311
>dbj|AP003578.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0682B08 Length = 138376 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 33 gccgcggcgctcgcctcctcccgc 56 ||||||||| |||||||||||||| Sbjct: 110178 gccgcggcgatcgcctcctcccgc 110201
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 acagtgatcgtcgccgccgc 101 |||||||||||||||||||| Sbjct: 6901644 acagtgatcgtcgccgccgc 6901625
>gb|AC138779.2| Homo sapiens BAC clone RP11-601I15 from 4, complete sequence Length = 132003 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gctcgaacctgtaatccctg 255 |||||||||||||||||||| Sbjct: 60366 gctcgaacctgtaatccctg 60347
>emb|BX323990.6| Zebrafish DNA sequence from clone DKEYP-69B4 in linkage group 1, complete sequence Length = 199414 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 491 aaaaagagaaaatggagaaaaaatattg 518 |||||| |||||||| |||||||||||| Sbjct: 187816 aaaaagtgaaaatggtgaaaaaatattg 187843
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||||||||||||||| ||||| Sbjct: 72808 cctcctcccgctgctgccaccgcc 72785
>dbj|AP003075.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468H06 Length = 155031 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 cctcccgctgctgccgccgc 68 |||||||||||||||||||| Sbjct: 53778 cctcccgctgctgccgccgc 53759
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0060O16 Length = 164373 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ctcccgctgctgccgccgcc 69 |||||||||||||||||||| Sbjct: 70668 ctcccgctgctgccgccgcc 70649
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 ctcccgctgctgccgccgcc 69 |||||||||||||||||||| Sbjct: 163291 ctcccgctgctgccgccgcc 163272
>gb|AC018633.2|AC018633 Homo sapiens clone UWGC:djs1 or RP11-16G1 from 7p14-15, complete sequence Length = 169234 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 aaagagaaaatggagaaaaa 512 |||||||||||||||||||| Sbjct: 125143 aaagagaaaatggagaaaaa 125162
>emb|AL928733.14| Mouse DNA sequence from clone RP23-190O13 on chromosome 2, complete sequence Length = 110511 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 467 aatacttactggtcttgctg 486 |||||||||||||||||||| Sbjct: 20858 aatacttactggtcttgctg 20839
>gb|AF125158.1|AF125158 Homo sapiens zinc finger DNA binding protein 99 (ZNF281) mRNA, complete cds Length = 3029 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 46 cctcctcccgctgctgccgccgcc 69 |||||| ||||||||||||||||| Sbjct: 140 cctcctgccgctgctgccgccgcc 117
>gb|AC154438.2| Mus musculus BAC clone RP23-178P20 from 16, complete sequence Length = 213575 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 479 tcttgctgaatcaaaaagagaaaa 502 |||| ||||||||||||||||||| Sbjct: 31353 tctttctgaatcaaaaagagaaaa 31330
>dbj|AK064623.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E04, full insert sequence Length = 1687 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 33 gccgcggcgctcgcctcctcccgc 56 ||||||||| |||||||||||||| Sbjct: 263 gccgcggcgatcgcctcctcccgc 240
>gb|AC006504.1|AC006504 Homo sapiens chromosome 19, BAC 326584 (CIT-B-459F4), complete sequence Length = 210137 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cgcctcctcccgctgctgcc 63 |||||||||||||||||||| Sbjct: 203194 cgcctcctcccgctgctgcc 203213
>gb|AC156636.2| Mus musculus BAC clone RP24-401F19 from chromosome 12, complete sequence Length = 170370 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 ctcccgctgctgccgccgcc 69 |||||||||||||||||||| Sbjct: 127967 ctcccgctgctgccgccgcc 127986
>gb|AC112685.16| Mus musculus chromosome 3, clone RP23-340E10, complete sequence Length = 248750 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 agttctgatttctggacctc 282 |||||||||||||||||||| Sbjct: 3616 agttctgatttctggacctc 3597
>gb|AC005758.1|AC005758 Homo sapiens chromosome 19, cosmid R27946, complete sequence Length = 41414 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 cgcctcctcccgctgctgcc 63 |||||||||||||||||||| Sbjct: 7591 cgcctcctcccgctgctgcc 7610
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 22 ccaaccgcatggccgcggcgctcgcctcctcc 53 |||||||| | ||||| ||||||||||||||| Sbjct: 899975 ccaaccgcctcgccgccgcgctcgcctcctcc 899944
>emb|AL772152.16| Mouse DNA sequence from clone RP23-157O1 on chromosome 4, complete sequence Length = 195937 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 506 agaaaaaatattggataaattagc 529 |||||||||||||||| ||||||| Sbjct: 58478 agaaaaaatattggattaattagc 58501
>gb|AC154672.2| Mus musculus BAC clone RP24-297H12 from 14, complete sequence Length = 163733 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 aagagaaaatggagaaaaaa 513 |||||||||||||||||||| Sbjct: 69239 aagagaaaatggagaaaaaa 69258
>gb|AC004712.1|AC004712 Homo sapiens chromosome 7 clone NHGRI:yWSS1564 map 7p14-15, complete sequence Length = 39275 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 aaagagaaaatggagaaaaa 512 |||||||||||||||||||| Sbjct: 22785 aaagagaaaatggagaaaaa 22804
>emb|AL954771.5| Zebrafish DNA sequence from clone CH211-220B15 in linkage group 21, complete sequence Length = 197721 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 502 atggagaaaaaatattggataaattagc 529 |||||||||||||||| | ||||||||| Sbjct: 34566 atggagaaaaaatatttgctaaattagc 34539
>emb|CT025592.14| Mouse DNA sequence from clone RP23-431J17 on chromosome 16, complete sequence Length = 215987 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 479 tcttgctgaatcaaaaagagaaaa 502 |||| ||||||||||||||||||| Sbjct: 36848 tctttctgaatcaaaaagagaaaa 36871
>emb|Z50857.1|CEF11A1 Caenorhabditis elegans Cosmid F11A1, complete sequence Length = 39353 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 aagagaaaatggagaaaaaa 513 |||||||||||||||||||| Sbjct: 11009 aagagaaaatggagaaaaaa 10990
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 cctcccgctgctgccgccgc 68 |||||||||||||||||||| Sbjct: 2999847 cctcccgctgctgccgccgc 2999866
>emb|AL691489.20| Mouse DNA sequence from clone RP23-176N9 on chromosome 2, complete sequence Length = 194864 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 gaaaatggagaaaaaatatt 517 |||||||||||||||||||| Sbjct: 67920 gaaaatggagaaaaaatatt 67901
>emb|AL772215.8| Mouse DNA sequence from clone RP23-114N20 on chromosome 2, complete sequence Length = 187537 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ccctgatatttcagttctga 270 |||||||||||||||||||| Sbjct: 28618 ccctgatatttcagttctga 28599
>emb|AL929570.7| Mouse DNA sequence from clone RP23-74G9 on chromosome 2, complete sequence Length = 230193 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 497 agaaaatggagaaaaaatattgga 520 ||||||||||||| |||||||||| Sbjct: 180011 agaaaatggagaagaaatattgga 179988 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,297,315 Number of Sequences: 3902068 Number of extensions: 7297315 Number of successful extensions: 152008 Number of sequences better than 10.0: 164 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 150429 Number of HSP's gapped (non-prelim): 1577 length of query: 590 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 567 effective length of database: 17,143,297,704 effective search space: 9720249798168 effective search space used: 9720249798168 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
