>ref|XM_542820.2| PREDICTED: Canis familiaris similar to progestin and adipoQ
           receptor family member IX (LOC485700), mRNA
          Length = 1554

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 88  tgcgctcgccgggggcgtcgctgcaga 114
           ||||| |||||||||||||||||||||
Sbjct: 218 tgcgcgcgccgggggcgtcgctgcaga 192

>gb|AE004724.1| Pseudomonas aeruginosa PAO1, section 285 of 529 of the complete genome
          Length = 16903

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 432   ttcgccttctggacgtcgggcgccg 456
             |||||| ||||||||||||||||||
Sbjct: 10742 ttcgccgtctggacgtcgggcgccg 10766

>gb|AC125142.4| Mus musculus BAC clone RP24-342G10 from chromosome 12, complete
             sequence
          Length = 174908

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 533   tgcttcaagttgttgttgcc 552
             ||||||||||||||||||||
Sbjct: 24944 tgcttcaagttgttgttgcc 24925

>emb|Z82202.1|HS34P24 Human DNA sequence from clone RP1-34P24 on chromosome 22, complete
           sequence
          Length = 105357

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 331 agggagaggcctcgccaggg 350
           ||||||||||||||||||||
Sbjct: 654 agggagaggcctcgccaggg 673

>gb|AC021074.15| Homo sapiens 3 BAC RP11-372E1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183100

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cgccgggggcgtcgctgcag 113
             ||||||||||||||||||||
Sbjct: 35253 cgccgggggcgtcgctgcag 35234

>emb|CR352243.7| Zebrafish DNA sequence from clone DKEYP-117H8 in linkage group 20
             Contains the paics gene for phosphoribosylaminoimidazole
             carboxylase phosphoribosylaminoimidazole
             succinocarboxamide synthetase, the gene for a novel
             AMP-binding enzyme domain containing protein, the gene for
             a novel protein similar to vertebrate phosphoribosyl
             pyrophosphate amidotransferase (PPAT), the 3' end of the
             gene for a novel protein similar to cytochrome P450 family
             2 subfamily J, the 5' end of a novel gene and two novel
             genes, complete sequence
          Length = 121253

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 407   gggaggtggtcgcttggtgcgtgg 430
             ||||||||| ||||||||||||||
Sbjct: 61050 gggaggtgggcgcttggtgcgtgg 61027

>gb|AE005935.1| Caulobacter crescentus CB15 section 261 of 359 of the complete genome
          Length = 13829

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 275   ggccgcaccagccgcagtcc 294
             ||||||||||||||||||||
Sbjct: 13000 ggccgcaccagccgcagtcc 13019

>ref|XM_944799.1| PREDICTED: Homo sapiens hypothetical protein LOC651614 (LOC651614),
           mRNA
          Length = 498

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  cgccgggggcgtcgctgcag 113
           ||||||||||||||||||||
Sbjct: 414 cgccgggggcgtcgctgcag 395

>ref|XM_933896.1| PREDICTED: Homo sapiens hypothetical protein LOC646751 (LOC646751),
           mRNA
          Length = 498

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  cgccgggggcgtcgctgcag 113
           ||||||||||||||||||||
Sbjct: 414 cgccgggggcgtcgctgcag 395

>ref|XM_693791.1| PREDICTED: Danio rerio similar to CG14692-PA (LOC570321), mRNA
          Length = 3601

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 407 gggaggtggtcgcttggtgcgtgg 430
           ||||||||| ||||||||||||||
Sbjct: 634 gggaggtgggcgcttggtgcgtgg 611

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 78      catcgccaaatgcgctcgcc 97
               ||||||||||||||||||||
Sbjct: 4437448 catcgccaaatgcgctcgcc 4437429

>emb|AJ335173.1|HSA335173 Homo sapiens genomic sequence surrounding NotI site, clone
           NL6-CM11C
          Length = 652

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  cgccgggggcgtcgctgcag 113
           ||||||||||||||||||||
Sbjct: 178 cgccgggggcgtcgctgcag 159

>emb|AJ336107.1|HSA336107 Homo sapiens genomic sequence surrounding NotI site, clone NL6-FB5C
          Length = 1031

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  cgccgggggcgtcgctgcag 113
           ||||||||||||||||||||
Sbjct: 178 cgccgggggcgtcgctgcag 159

>emb|AJ327180.1|HSA327180 Homo sapiens genomic sequence surrounding NotI site, clone NR5-CN1R
          Length = 754

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  cgccgggggcgtcgctgcag 113
           ||||||||||||||||||||
Sbjct: 178 cgccgggggcgtcgctgcag 159

>emb|AJ324844.1|HSA324844 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-IO11R
          Length = 731

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  cgccgggggcgtcgctgcag 113
           ||||||||||||||||||||
Sbjct: 178 cgccgggggcgtcgctgcag 159

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 26      tgggctgcgctgtagccttc 45
               ||||||||||||||||||||
Sbjct: 2078062 tgggctgcgctgtagccttc 2078043

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 437    cttctggacgtcgggcgccg 456
              ||||||||||||||||||||
Sbjct: 757423 cttctggacgtcgggcgccg 757404

>emb|AL928681.5| Mouse DNA sequence from clone RP23-82M15 on chromosome 2, complete
             sequence
          Length = 125926

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   cgccatctccgaagggagag 338
             ||||||||||||||||||||
Sbjct: 71150 cgccatctccgaagggagag 71169


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,201,221
Number of Sequences: 3902068
Number of extensions: 3201221
Number of successful extensions: 59476
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59130
Number of HSP's gapped (non-prelim): 346
length of query: 645
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 622
effective length of database: 17,143,297,704
effective search space: 10663131171888
effective search space used: 10663131171888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)