ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal18b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK122164.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 5e-37
2dbj|AK106550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 5e-37
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
4dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
5dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
6dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic D... 153 5e-34
7emb|AJ563423.1|ZMA563423 Zea mays partial ivr2b pseudogene 115 1e-22
8ref|XM_550450.1| Oryza sativa (japonica cultivar-group), mRNA 88 2e-14
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
10dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
11dbj|AK106556.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
12gb|AC137077.26| Medicago truncatula clone mth2-8g15, complete se... 74 4e-10
13emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g1... 74 4e-10
14gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha... 72 1e-09
15gb|BT018888.1| Zea mays clone EL01T0205G11.d mRNA sequence 66 9e-08
16dbj|AP006400.1| Lotus japonicus genomic DNA, chromosome 4, clone... 66 9e-08
17gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 64 3e-07
18ref|NM_211930.1| Eremothecium gossypii AGR202Wp (AGR202W), mRNA 64 3e-07
19gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete se... 52 0.001
20emb|BX324172.22| Zebrafish DNA sequence from clone DKEYP-86D6 in... 44 0.32
21ref|XM_686368.1| PREDICTED: Danio rerio hypothetical protein LOC... 44 0.32
22gb|AC112223.2| Homo sapiens chromosome 3 clone RP11-237P23, comp... 42 1.2
23ref|NM_124121.2| Arabidopsis thaliana unknown protein AT5G47480 ... 40 4.9
24emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chr... 40 4.9
25gb|AY271165.1| Homo sapiens clone SKG02-C06 putative promoter se... 40 4.9
26emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 4.9
27emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, ... 40 4.9
28emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome 4, B... 40 4.9
29emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 ... 40 4.9
30gb|AC153361.5| Mus musculus BAC clone RP23-291L20 from chromosom... 40 4.9
31gb|AC022267.8|AC022267 Homo sapiens BAC clone RP11-407H18 from 4... 40 4.9
32dbj|AB025628.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 4.9
33dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 4.9
34emb|AL929443.4| Mouse DNA sequence from clone RP23-467A7 on chro... 40 4.9

>dbj|AK122164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147K10, full
            insert sequence
          Length = 5501

 Score =  163 bits (82), Expect = 5e-37
 Identities = 161/186 (86%), Gaps = 6/186 (3%)
 Strand = Plus / Plus

                                                                        
Query: 1    atttgtttcaaaatcccgcc---aggcaaaattagggcaacagaacaagttttactacga 57
            ||||||||||||||||| ||   |||| |||||||||||||| |||||||||||||| ||
Sbjct: 3984 atttgtttcaaaatcccaccggcaggctaaattagggcaacaaaacaagttttactatga 4043

                                                                        
Query: 58   tgaaaagctgaagcgatgggtagaggaaggtgctgagattcctgctgaggagcctcctct 117
             |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 4044 cgaaaagctaaagcgatgggtggaggaaggtgctgagattcctgccgaggagcctcctct 4103

                                                                        
Query: 118  cgcgccacctccaacaaaatcctcctcataccagaatggaatgccggactataacttaaa 177
            | | ||||||||| ||||| ||||   || |||||||||  ||   |||||||| |||||
Sbjct: 4104 ccctccacctccatcaaaaccctc---attccagaatggtgtggtagactataaattaaa 4160

                  
Query: 178  tggccc 183
            ||||||
Sbjct: 4161 tggccc 4166



 Score =  141 bits (71), Expect = 2e-30
 Identities = 98/107 (91%)
 Strand = Plus / Plus

                                                                        
Query: 238  ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297
            |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 4221 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 4280

                                                           
Query: 298  tggacgaatgggtgtccggtccagatatgtggacacattcaataagg 344
            |||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4281 tggacggatgggtgtccggtccagatatgtggacacattcaacaagg 4327



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>dbj|AK106550.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G03, full
           insert sequence
          Length = 1647

 Score =  163 bits (82), Expect = 5e-37
 Identities = 161/186 (86%), Gaps = 6/186 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttgtttcaaaatcccgcc---aggcaaaattagggcaacagaacaagttttactacga 57
           ||||||||||||||||| ||   |||| |||||||||||||| |||||||||||||| ||
Sbjct: 131 atttgtttcaaaatcccaccggcaggctaaattagggcaacaaaacaagttttactatga 190

                                                                       
Query: 58  tgaaaagctgaagcgatgggtagaggaaggtgctgagattcctgctgaggagcctcctct 117
            |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 191 cgaaaagctaaagcgatgggtggaggaaggtgctgagattcctgccgaggagcctcctct 250

                                                                       
Query: 118 cgcgccacctccaacaaaatcctcctcataccagaatggaatgccggactataacttaaa 177
           | | ||||||||| ||||| ||||   || |||||||||  ||   |||||||| |||||
Sbjct: 251 ccctccacctccatcaaaaccctc---attccagaatggtgtggtagactataaattaaa 307

                 
Query: 178 tggccc 183
           ||||||
Sbjct: 308 tggccc 313



 Score =  141 bits (71), Expect = 2e-30
 Identities = 98/107 (91%)
 Strand = Plus / Plus

                                                                       
Query: 238 ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297
           |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 368 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 427

                                                          
Query: 298 tggacgaatgggtgtccggtccagatatgtggacacattcaataagg 344
           |||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 428 tggacggatgggtgtccggtccagatatgtggacacattcaacaagg 474



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score =  153 bits (77), Expect = 5e-34
 Identities = 142/163 (87%), Gaps = 3/163 (1%)
 Strand = Plus / Plus

                                                                          
Query: 21     aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80
              |||| |||||||||||||| |||||||||||||| || |||||||| ||||||||||| |
Sbjct: 284869 aggctaaattagggcaacaaaacaagttttactatgacgaaaagctaaagcgatgggtgg 284928

                                                                          
Query: 81     aggaaggtgctgagattcctgctgaggagcctcctctcgcgccacctccaacaaaatcct 140
              |||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||| |||
Sbjct: 284929 aggaaggtgctgagattcctgccgaggagcctcctctccctccacctccatcaaaaccct 284988

                                                         
Query: 141    cctcataccagaatggaatgccggactataacttaaatggccc 183
              |   || |||||||||  ||   |||||||| |||||||||||
Sbjct: 284989 c---attccagaatggtgtggtagactataaattaaatggccc 285028



 Score =  103 bits (52), Expect = 4e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                          
Query: 238    ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297
              |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 285083 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 285142

                                      
Query: 298    tggacgaatgggtgtccggtccag 321
              |||||| |||||||||||||||||
Sbjct: 285143 tggacggatgggtgtccggtccag 285166



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 320    agatatgtggacacattcaataagg 344
              |||||||||||||||||||| ||||
Sbjct: 285250 agatatgtggacacattcaacaagg 285274



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>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1359_D06
          Length = 146805

 Score =  153 bits (77), Expect = 5e-34
 Identities = 142/163 (87%), Gaps = 3/163 (1%)
 Strand = Plus / Plus

                                                                         
Query: 21    aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80
             |||| |||||||||||||| |||||||||||||| || |||||||| ||||||||||| |
Sbjct: 13653 aggctaaattagggcaacaaaacaagttttactatgacgaaaagctaaagcgatgggtgg 13712

                                                                         
Query: 81    aggaaggtgctgagattcctgctgaggagcctcctctcgcgccacctccaacaaaatcct 140
             |||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||| |||
Sbjct: 13713 aggaaggtgctgagattcctgccgaggagcctcctctccctccacctccatcaaaaccct 13772

                                                        
Query: 141   cctcataccagaatggaatgccggactataacttaaatggccc 183
             |   || |||||||||  ||   |||||||| |||||||||||
Sbjct: 13773 c---attccagaatggtgtggtagactataaattaaatggccc 13812



 Score =  103 bits (52), Expect = 4e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                         
Query: 238   ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297
             |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 13867 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 13926

                                     
Query: 298   tggacgaatgggtgtccggtccag 321
             |||||| |||||||||||||||||
Sbjct: 13927 tggacggatgggtgtccggtccag 13950



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 320   agatatgtggacacattcaataagg 344
             |||||||||||||||||||| ||||
Sbjct: 14034 agatatgtggacacattcaacaagg 14058



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>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_C06
          Length = 110989

 Score =  153 bits (77), Expect = 5e-34
 Identities = 142/163 (87%), Gaps = 3/163 (1%)
 Strand = Plus / Plus

                                                                         
Query: 21    aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80
             |||| |||||||||||||| |||||||||||||| || |||||||| ||||||||||| |
Sbjct: 94844 aggctaaattagggcaacaaaacaagttttactatgacgaaaagctaaagcgatgggtgg 94903

                                                                         
Query: 81    aggaaggtgctgagattcctgctgaggagcctcctctcgcgccacctccaacaaaatcct 140
             |||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||| |||
Sbjct: 94904 aggaaggtgctgagattcctgccgaggagcctcctctccctccacctccatcaaaaccct 94963

                                                        
Query: 141   cctcataccagaatggaatgccggactataacttaaatggccc 183
             |   || |||||||||  ||   |||||||| |||||||||||
Sbjct: 94964 c---attccagaatggtgtggtagactataaattaaatggccc 95003



 Score =  103 bits (52), Expect = 4e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                         
Query: 238   ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297
             |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 95058 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 95117

                                     
Query: 298   tggacgaatgggtgtccggtccag 321
             |||||| |||||||||||||||||
Sbjct: 95118 tggacggatgggtgtccggtccag 95141



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 320   agatatgtggacacattcaataagg 344
             |||||||||||||||||||| ||||
Sbjct: 95225 agatatgtggacacattcaacaagg 95249



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>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             clone:OJA1212_C06
          Length = 113554

 Score =  153 bits (77), Expect = 5e-34
 Identities = 142/163 (87%), Gaps = 3/163 (1%)
 Strand = Plus / Plus

                                                                         
Query: 21    aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80
             |||| |||||||||||||| |||||||||||||| || |||||||| ||||||||||| |
Sbjct: 97409 aggctaaattagggcaacaaaacaagttttactatgacgaaaagctaaagcgatgggtgg 97468

                                                                         
Query: 81    aggaaggtgctgagattcctgctgaggagcctcctctcgcgccacctccaacaaaatcct 140
             |||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||| |||
Sbjct: 97469 aggaaggtgctgagattcctgccgaggagcctcctctccctccacctccatcaaaaccct 97528

                                                        
Query: 141   cctcataccagaatggaatgccggactataacttaaatggccc 183
             |   || |||||||||  ||   |||||||| |||||||||||
Sbjct: 97529 c---attccagaatggtgtggtagactataaattaaatggccc 97568



 Score =  103 bits (52), Expect = 4e-19
 Identities = 76/84 (90%)
 Strand = Plus / Plus

                                                                         
Query: 238   ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297
             |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| ||
Sbjct: 97623 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 97682

                                     
Query: 298   tggacgaatgggtgtccggtccag 321
             |||||| |||||||||||||||||
Sbjct: 97683 tggacggatgggtgtccggtccag 97706



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 320   agatatgtggacacattcaataagg 344
             |||||||||||||||||||| ||||
Sbjct: 97790 agatatgtggacacattcaacaagg 97814



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>emb|AJ563423.1|ZMA563423 Zea mays partial ivr2b pseudogene
          Length = 7411

 Score =  115 bits (58), Expect = 1e-22
 Identities = 103/118 (87%)
 Strand = Plus / Plus

                                                                        
Query: 21   aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80
            |||||||||||||| | |||||||| |||||||| ||||||||| ||||||| ||||| |
Sbjct: 2387 aggcaaaattaggggatcagaacaaattttactatgatgaaaagttgaagcggtgggtgg 2446

                                                                      
Query: 81   aggaaggtgctgagattcctgctgaggagcctcctctcgcgccacctccaacaaaatc 138
            | |||||||||| | ||||||| ||||||||||||||  | || ||||||||||||||
Sbjct: 2447 aagaaggtgctgcggttcctgccgaggagcctcctcttcctccccctccaacaaaatc 2504



 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 62/70 (88%)
 Strand = Plus / Plus

                                                                        
Query: 252  tggggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtg 311
            |||| ||||||||||||||||| ||||| |||||||| ||| ||||||| || |||||||
Sbjct: 2615 tgggtatgccaccaattccacctagccaaaaccagttttcttctcgtgggcggatgggtg 2674

                      
Query: 312  tccggtccag 321
            |||| |||||
Sbjct: 2675 tccgatccag 2684



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>ref|XM_550450.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2157

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                        
Query: 36   aacagaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctgaga 95
            |||| |||||||| ||||| || || ||||||||||| ||||| || ||||||||||| |
Sbjct: 1014 aacaaaacaagttctactatgacgagaagctgaagcggtgggtggaagaaggtgctgaca 1073

                                                    
Query: 96   ttcctgctgaggagcctcctctcgcgccacctccaacaaa 135
            | ||||||||||||||||| ||  | ||||||||||||||
Sbjct: 1074 tacctgctgaggagcctccccttcccccacctccaacaaa 1113



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                        
Query: 254  gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgtc 313
            |||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||| 
Sbjct: 1229 gggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgtt 1288

                                                    
Query: 314  cggtccagatatgtggacacattcaataaggctggtgcaa 353
             | || ||||| || |||||||| || |||| ||||||||
Sbjct: 1289 agatcaagatacgtcgacacatttaacaagggtggtgcaa 1328



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                          
Query: 36     aacagaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctgaga 95
              |||| |||||||| ||||| || || ||||||||||| ||||| || ||||||||||| |
Sbjct: 387455 aacaaaacaagttctactatgacgagaagctgaagcggtgggtggaagaaggtgctgaca 387396

                                                      
Query: 96     ttcctgctgaggagcctcctctcgcgccacctccaacaaa 135
              | ||||||||||||||||| ||  | ||||||||||||||
Sbjct: 387395 tacctgctgaggagcctccccttcccccacctccaacaaa 387356



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                         
Query: 254    gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgt 312
              |||||||||||||| ||||| ||||||||||| ||||| || |||||||| ||||||||
Sbjct: 387240 gggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgt 387182



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>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644B06
          Length = 194509

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 36    aacagaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctgaga 95
             |||| |||||||| ||||| || || ||||||||||| ||||| || ||||||||||| |
Sbjct: 97408 aacaaaacaagttctactatgacgagaagctgaagcggtgggtggaagaaggtgctgaca 97349

                                                     
Query: 96    ttcctgctgaggagcctcctctcgcgccacctccaacaaa 135
             | ||||||||||||||||| ||  | ||||||||||||||
Sbjct: 97348 tacctgctgaggagcctccccttcccccacctccaacaaa 97309



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254   gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgt 312
             |||||||||||||| ||||| ||||||||||| ||||| || |||||||| ||||||||
Sbjct: 97193 gggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgt 97135



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>dbj|AK106556.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-H03, full
            insert sequence
          Length = 2157

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                        
Query: 36   aacagaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctgaga 95
            |||| |||||||| ||||| || || ||||||||||| ||||| || ||||||||||| |
Sbjct: 1014 aacaaaacaagttctactatgacgagaagctgaagcggtgggtggaagaaggtgctgaca 1073

                                                    
Query: 96   ttcctgctgaggagcctcctctcgcgccacctccaacaaa 135
            | ||||||||||||||||| ||  | ||||||||||||||
Sbjct: 1074 tacctgctgaggagcctccccttcccccacctccaacaaa 1113



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                        
Query: 254  gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgtc 313
            |||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||| 
Sbjct: 1229 gggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgtt 1288

                                                    
Query: 314  cggtccagatatgtggacacattcaataaggctggtgcaa 353
             | || ||||| || |||||||| || |||| ||||||||
Sbjct: 1289 agatcaagatacgtcgacacatttaacaagggtggtgcaa 1328



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>gb|AC137077.26| Medicago truncatula clone mth2-8g15, complete sequence
          Length = 138303

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                 
Query: 41   aacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctga 93
            ||||||||||| || || |||||||||||| ||||||||||||||||||||||
Sbjct: 1405 aacaagttttattatgacgaaaagctgaagagatgggtagaggaaggtgctga 1353



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>emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g10, COMPLETE SEQUENCE
          Length = 153273

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                   
Query: 41     aacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctga 93
              ||||||||||| || || |||||||||||| ||||||||||||||||||||||
Sbjct: 146105 aacaagttttattatgacgaaaagctgaagagatgggtagaggaaggtgctga 146053



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>gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha subunit, membrane
             protein homolog, and Myb-related protein genes, complete
             cds; and unknown gene
          Length = 33178

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                         
Query: 36    aacagaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctgaga 95
             |||| |||||||| ||||| ||  | ||||||||||| ||||| || ||||||||||| |
Sbjct: 12973 aacaaaacaagttctactatgacaagaagctgaagcggtgggtggaagaaggtgctgaca 12914

                                                     
Query: 96    ttcctgctgaggagcctcctctcgcgccacctccaacaaa 135
             | |||| |||||||||||| ||  | ||||||||||||||
Sbjct: 12913 tacctgttgaggagcctccccttcccccacctccaacaaa 12874



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254   gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgt 312
             |||||||||||||| ||||| ||||||||||| ||||| || |||||||| ||||||||
Sbjct: 12758 gggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgt 12700



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>gb|BT018888.1| Zea mays clone EL01T0205G11.d mRNA sequence
          Length = 1902

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                        
Query: 254  gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgtc 313
            ||||||||||| || ||||||| ||||||||||||||| || |||||| | |||||||| 
Sbjct: 956  gggatgccaccgatgccacccacccagaaccagttctcagcacgtggaaggatgggtgtt 1015

                             
Query: 314  cggtccagatatgtgga 330
             | || |||||||||||
Sbjct: 1016 agatcaagatatgtgga 1032



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 68/79 (86%), Gaps = 3/79 (3%)
 Strand = Plus / Plus

                                                                       
Query: 3   ttgtttcaaaatc---ccgccaggcaaaattagggcaacagaacaagttttactacgatg 59
           |||||||||||||   ||||||||||||  ||||| ||||||||||||| ||||| || |
Sbjct: 729 ttgtttcaaaatctcaccgccaggcaaagctaggggaacagaacaagttctactatgacg 788

                              
Query: 60  aaaagctgaagcgatgggt 78
           | ||||||||||| |||||
Sbjct: 789 agaagctgaagcggtgggt 807



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>dbj|AP006400.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT22I23, TM0281b,
             complete sequence
          Length = 48187

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                         
Query: 21    aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80
             |||| ||||| ||| || |||||||||| || || |||||||| |||||  |||||||||
Sbjct: 43722 aggctaaattgggggaaaagaacaagttctattatgatgaaaacctgaaaagatgggtag 43663

                          
Query: 81    aggaaggtgctga 93
             |||||||||||||
Sbjct: 43662 aggaaggtgctga 43650



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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
               complete sequence
          Length = 1476513

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                       
Query: 39      agaacaagttttactacgatgaaaagctgaagcgatgggt 78
               ||||||| |||||||||||||||||||||||||| |||||
Sbjct: 1138501 agaacaacttttactacgatgaaaagctgaagcgctgggt 1138540



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>ref|NM_211930.1| Eremothecium gossypii AGR202Wp (AGR202W), mRNA
          Length = 6819

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                    
Query: 39   agaacaagttttactacgatgaaaagctgaagcgatgggt 78
            ||||||| |||||||||||||||||||||||||| |||||
Sbjct: 6392 agaacaacttttactacgatgaaaagctgaagcgctgggt 6431



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>gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete sequence
          Length = 130194

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                  
Query: 39   agaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctg 92
            |||||||||| || || |||||||| || ||  |||||||||||||||||||||
Sbjct: 9905 agaacaagttctattatgatgaaaacctaaaaagatgggtagaggaaggtgctg 9958



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>emb|BX324172.22| Zebrafish DNA sequence from clone DKEYP-86D6 in linkage group 13,
              complete sequence
          Length = 184555

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 90     ctgagattcctgctgaggagcc 111
              ||||||||||||||||||||||
Sbjct: 147888 ctgagattcctgctgaggagcc 147867



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>ref|XM_686368.1| PREDICTED: Danio rerio hypothetical protein LOC563004 (LOC563004),
           mRNA
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 90  ctgagattcctgctgaggagcc 111
           ||||||||||||||||||||||
Sbjct: 350 ctgagattcctgctgaggagcc 371



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>gb|AC112223.2| Homo sapiens chromosome 3 clone RP11-237P23, complete sequence
          Length = 166745

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 239   tcagatcatggtttggggatg 259
             |||||||||||||||||||||
Sbjct: 51644 tcagatcatggtttggggatg 51664



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>ref|NM_124121.2| Arabidopsis thaliana unknown protein AT5G47480 mRNA, complete cds
          Length = 4345

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 281  aaccagttctctgctcgtggacgaatgggtgt 312
            ||||| ||||| ||||||||||| ||||||||
Sbjct: 3532 aaccaattctcagctcgtggacgtatgggtgt 3563



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>emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chromosome 9, complete
             sequence
          Length = 130718

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   caacaaaatcctcctcatac 148
             ||||||||||||||||||||
Sbjct: 50987 caacaaaatcctcctcatac 51006



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>gb|AY271165.1| Homo sapiens clone SKG02-C06 putative promoter sequence
          Length = 327

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 129 caacaaaatcctcctcatac 148
           ||||||||||||||||||||
Sbjct: 247 caacaaaatcctcctcatac 266



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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 266    attccacccagccagaacca 285
              ||||||||||||||||||||
Sbjct: 507058 attccacccagccagaacca 507077



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>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65
          Length = 198320

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 226   atctccaaaacattcagatcatgg 249
             |||||||||| |||||||||||||
Sbjct: 27223 atctccaaaaaattcagatcatgg 27200



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>emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome 4, BAC clone  (ESSA project)
          Length = 89904

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 226   atctccaaaacattcagatcatgg 249
             |||||||||| |||||||||||||
Sbjct: 74155 atctccaaaaaattcagatcatgg 74132



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>emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 clone M3E9 (ESSA project)
          Length = 80677

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 226   atctccaaaacattcagatcatgg 249
             |||||||||| |||||||||||||
Sbjct: 79185 atctccaaaaaattcagatcatgg 79208



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>gb|AC153361.5| Mus musculus BAC clone RP23-291L20 from chromosome 10, complete sequence
          Length = 212761

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 188    agtggaatgcatattcctaa 207
              ||||||||||||||||||||
Sbjct: 153536 agtggaatgcatattcctaa 153517



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>gb|AC022267.8|AC022267 Homo sapiens BAC clone RP11-407H18 from 4, complete sequence
          Length = 199472

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 233   aaacattcagatcatggttt 252
             ||||||||||||||||||||
Sbjct: 95466 aaacattcagatcatggttt 95447



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>dbj|AB025628.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ7
          Length = 80117

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 281   aaccagttctctgctcgtggacgaatgggtgt 312
             ||||| ||||| ||||||||||| ||||||||
Sbjct: 22253 aaccaattctcagctcgtggacgtatgggtgt 22284



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>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13
          Length = 85992

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 226   atctccaaaacattcagatcatgg 249
             |||||||||| |||||||||||||
Sbjct: 38077 atctccaaaaaattcagatcatgg 38100



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>emb|AL929443.4| Mouse DNA sequence from clone RP23-467A7 on chromosome 2, complete
             sequence
          Length = 189821

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   caaaatcctcctcataccag 151
             ||||||||||||||||||||
Sbjct: 62933 caaaatcctcctcataccag 62914


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,259,902
Number of Sequences: 3902068
Number of extensions: 3259902
Number of successful extensions: 63533
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63419
Number of HSP's gapped (non-prelim): 112
length of query: 370
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 348
effective length of database: 17,147,199,772
effective search space: 5967225520656
effective search space used: 5967225520656
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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