| Clone Name | baal18b09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK122164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147K10, full insert sequence Length = 5501 Score = 163 bits (82), Expect = 5e-37 Identities = 161/186 (86%), Gaps = 6/186 (3%) Strand = Plus / Plus Query: 1 atttgtttcaaaatcccgcc---aggcaaaattagggcaacagaacaagttttactacga 57 ||||||||||||||||| || |||| |||||||||||||| |||||||||||||| || Sbjct: 3984 atttgtttcaaaatcccaccggcaggctaaattagggcaacaaaacaagttttactatga 4043 Query: 58 tgaaaagctgaagcgatgggtagaggaaggtgctgagattcctgctgaggagcctcctct 117 |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 4044 cgaaaagctaaagcgatgggtggaggaaggtgctgagattcctgccgaggagcctcctct 4103 Query: 118 cgcgccacctccaacaaaatcctcctcataccagaatggaatgccggactataacttaaa 177 | | ||||||||| ||||| |||| || ||||||||| || |||||||| ||||| Sbjct: 4104 ccctccacctccatcaaaaccctc---attccagaatggtgtggtagactataaattaaa 4160 Query: 178 tggccc 183 |||||| Sbjct: 4161 tggccc 4166 Score = 141 bits (71), Expect = 2e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 238 ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297 |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| || Sbjct: 4221 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 4280 Query: 298 tggacgaatgggtgtccggtccagatatgtggacacattcaataagg 344 |||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 4281 tggacggatgggtgtccggtccagatatgtggacacattcaacaagg 4327
>dbj|AK106550.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G03, full insert sequence Length = 1647 Score = 163 bits (82), Expect = 5e-37 Identities = 161/186 (86%), Gaps = 6/186 (3%) Strand = Plus / Plus Query: 1 atttgtttcaaaatcccgcc---aggcaaaattagggcaacagaacaagttttactacga 57 ||||||||||||||||| || |||| |||||||||||||| |||||||||||||| || Sbjct: 131 atttgtttcaaaatcccaccggcaggctaaattagggcaacaaaacaagttttactatga 190 Query: 58 tgaaaagctgaagcgatgggtagaggaaggtgctgagattcctgctgaggagcctcctct 117 |||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 191 cgaaaagctaaagcgatgggtggaggaaggtgctgagattcctgccgaggagcctcctct 250 Query: 118 cgcgccacctccaacaaaatcctcctcataccagaatggaatgccggactataacttaaa 177 | | ||||||||| ||||| |||| || ||||||||| || |||||||| ||||| Sbjct: 251 ccctccacctccatcaaaaccctc---attccagaatggtgtggtagactataaattaaa 307 Query: 178 tggccc 183 |||||| Sbjct: 308 tggccc 313 Score = 141 bits (71), Expect = 2e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 238 ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297 |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| || Sbjct: 368 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 427 Query: 298 tggacgaatgggtgtccggtccagatatgtggacacattcaataagg 344 |||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 428 tggacggatgggtgtccggtccagatatgtggacacattcaacaagg 474
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 153 bits (77), Expect = 5e-34 Identities = 142/163 (87%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 21 aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80 |||| |||||||||||||| |||||||||||||| || |||||||| ||||||||||| | Sbjct: 284869 aggctaaattagggcaacaaaacaagttttactatgacgaaaagctaaagcgatgggtgg 284928 Query: 81 aggaaggtgctgagattcctgctgaggagcctcctctcgcgccacctccaacaaaatcct 140 |||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||| ||| Sbjct: 284929 aggaaggtgctgagattcctgccgaggagcctcctctccctccacctccatcaaaaccct 284988 Query: 141 cctcataccagaatggaatgccggactataacttaaatggccc 183 | || ||||||||| || |||||||| ||||||||||| Sbjct: 284989 c---attccagaatggtgtggtagactataaattaaatggccc 285028 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 238 ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297 |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| || Sbjct: 285083 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 285142 Query: 298 tggacgaatgggtgtccggtccag 321 |||||| ||||||||||||||||| Sbjct: 285143 tggacggatgggtgtccggtccag 285166 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 agatatgtggacacattcaataagg 344 |||||||||||||||||||| |||| Sbjct: 285250 agatatgtggacacattcaacaagg 285274
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 153 bits (77), Expect = 5e-34 Identities = 142/163 (87%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 21 aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80 |||| |||||||||||||| |||||||||||||| || |||||||| ||||||||||| | Sbjct: 13653 aggctaaattagggcaacaaaacaagttttactatgacgaaaagctaaagcgatgggtgg 13712 Query: 81 aggaaggtgctgagattcctgctgaggagcctcctctcgcgccacctccaacaaaatcct 140 |||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||| ||| Sbjct: 13713 aggaaggtgctgagattcctgccgaggagcctcctctccctccacctccatcaaaaccct 13772 Query: 141 cctcataccagaatggaatgccggactataacttaaatggccc 183 | || ||||||||| || |||||||| ||||||||||| Sbjct: 13773 c---attccagaatggtgtggtagactataaattaaatggccc 13812 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 238 ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297 |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| || Sbjct: 13867 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 13926 Query: 298 tggacgaatgggtgtccggtccag 321 |||||| ||||||||||||||||| Sbjct: 13927 tggacggatgggtgtccggtccag 13950 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 agatatgtggacacattcaataagg 344 |||||||||||||||||||| |||| Sbjct: 14034 agatatgtggacacattcaacaagg 14058
>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_C06 Length = 110989 Score = 153 bits (77), Expect = 5e-34 Identities = 142/163 (87%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 21 aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80 |||| |||||||||||||| |||||||||||||| || |||||||| ||||||||||| | Sbjct: 94844 aggctaaattagggcaacaaaacaagttttactatgacgaaaagctaaagcgatgggtgg 94903 Query: 81 aggaaggtgctgagattcctgctgaggagcctcctctcgcgccacctccaacaaaatcct 140 |||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||| ||| Sbjct: 94904 aggaaggtgctgagattcctgccgaggagcctcctctccctccacctccatcaaaaccct 94963 Query: 141 cctcataccagaatggaatgccggactataacttaaatggccc 183 | || ||||||||| || |||||||| ||||||||||| Sbjct: 94964 c---attccagaatggtgtggtagactataaattaaatggccc 95003 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 238 ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297 |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| || Sbjct: 95058 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 95117 Query: 298 tggacgaatgggtgtccggtccag 321 |||||| ||||||||||||||||| Sbjct: 95118 tggacggatgggtgtccggtccag 95141 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 agatatgtggacacattcaataagg 344 |||||||||||||||||||| |||| Sbjct: 95225 agatatgtggacacattcaacaagg 95249
>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, clone:OJA1212_C06 Length = 113554 Score = 153 bits (77), Expect = 5e-34 Identities = 142/163 (87%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 21 aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80 |||| |||||||||||||| |||||||||||||| || |||||||| ||||||||||| | Sbjct: 97409 aggctaaattagggcaacaaaacaagttttactatgacgaaaagctaaagcgatgggtgg 97468 Query: 81 aggaaggtgctgagattcctgctgaggagcctcctctcgcgccacctccaacaaaatcct 140 |||||||||||||||||||||| ||||||||||||||| | ||||||||| ||||| ||| Sbjct: 97469 aggaaggtgctgagattcctgccgaggagcctcctctccctccacctccatcaaaaccct 97528 Query: 141 cctcataccagaatggaatgccggactataacttaaatggccc 183 | || ||||||||| || |||||||| ||||||||||| Sbjct: 97529 c---attccagaatggtgtggtagactataaattaaatggccc 97568 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 238 ttcagatcatggtttggggatgccaccaattccacccagccagaaccagttctctgctcg 297 |||||| ||||||| ||| |||||||||||||| || |||||||||||||| ||||| || Sbjct: 97623 ttcagagcatggttcgggaatgccaccaattccgccaagccagaaccagttttctgcccg 97682 Query: 298 tggacgaatgggtgtccggtccag 321 |||||| ||||||||||||||||| Sbjct: 97683 tggacggatgggtgtccggtccag 97706 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 agatatgtggacacattcaataagg 344 |||||||||||||||||||| |||| Sbjct: 97790 agatatgtggacacattcaacaagg 97814
>emb|AJ563423.1|ZMA563423 Zea mays partial ivr2b pseudogene Length = 7411 Score = 115 bits (58), Expect = 1e-22 Identities = 103/118 (87%) Strand = Plus / Plus Query: 21 aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80 |||||||||||||| | |||||||| |||||||| ||||||||| ||||||| ||||| | Sbjct: 2387 aggcaaaattaggggatcagaacaaattttactatgatgaaaagttgaagcggtgggtgg 2446 Query: 81 aggaaggtgctgagattcctgctgaggagcctcctctcgcgccacctccaacaaaatc 138 | |||||||||| | ||||||| |||||||||||||| | || |||||||||||||| Sbjct: 2447 aagaaggtgctgcggttcctgccgaggagcctcctcttcctccccctccaacaaaatc 2504 Score = 75.8 bits (38), Expect = 9e-11 Identities = 62/70 (88%) Strand = Plus / Plus Query: 252 tggggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtg 311 |||| ||||||||||||||||| ||||| |||||||| ||| ||||||| || ||||||| Sbjct: 2615 tgggtatgccaccaattccacctagccaaaaccagttttcttctcgtgggcggatgggtg 2674 Query: 312 tccggtccag 321 |||| ||||| Sbjct: 2675 tccgatccag 2684
>ref|XM_550450.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 Score = 87.7 bits (44), Expect = 2e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 36 aacagaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctgaga 95 |||| |||||||| ||||| || || ||||||||||| ||||| || ||||||||||| | Sbjct: 1014 aacaaaacaagttctactatgacgagaagctgaagcggtgggtggaagaaggtgctgaca 1073 Query: 96 ttcctgctgaggagcctcctctcgcgccacctccaacaaa 135 | ||||||||||||||||| || | |||||||||||||| Sbjct: 1074 tacctgctgaggagcctccccttcccccacctccaacaaa 1113 Score = 79.8 bits (40), Expect = 6e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 254 gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgtc 313 |||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 1229 gggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgtt 1288 Query: 314 cggtccagatatgtggacacattcaataaggctggtgcaa 353 | || ||||| || |||||||| || |||| |||||||| Sbjct: 1289 agatcaagatacgtcgacacatttaacaagggtggtgcaa 1328
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 87.7 bits (44), Expect = 2e-14 Identities = 86/100 (86%) Strand = Plus / Minus Query: 36 aacagaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctgaga 95 |||| |||||||| ||||| || || ||||||||||| ||||| || ||||||||||| | Sbjct: 387455 aacaaaacaagttctactatgacgagaagctgaagcggtgggtggaagaaggtgctgaca 387396 Query: 96 ttcctgctgaggagcctcctctcgcgccacctccaacaaa 135 | ||||||||||||||||| || | |||||||||||||| Sbjct: 387395 tacctgctgaggagcctccccttcccccacctccaacaaa 387356 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 254 gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgt 312 |||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 387240 gggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgt 387182
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 87.7 bits (44), Expect = 2e-14 Identities = 86/100 (86%) Strand = Plus / Minus Query: 36 aacagaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctgaga 95 |||| |||||||| ||||| || || ||||||||||| ||||| || ||||||||||| | Sbjct: 97408 aacaaaacaagttctactatgacgagaagctgaagcggtgggtggaagaaggtgctgaca 97349 Query: 96 ttcctgctgaggagcctcctctcgcgccacctccaacaaa 135 | ||||||||||||||||| || | |||||||||||||| Sbjct: 97348 tacctgctgaggagcctccccttcccccacctccaacaaa 97309 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 254 gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgt 312 |||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 97193 gggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgt 97135
>dbj|AK106556.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-H03, full insert sequence Length = 2157 Score = 87.7 bits (44), Expect = 2e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 36 aacagaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctgaga 95 |||| |||||||| ||||| || || ||||||||||| ||||| || ||||||||||| | Sbjct: 1014 aacaaaacaagttctactatgacgagaagctgaagcggtgggtggaagaaggtgctgaca 1073 Query: 96 ttcctgctgaggagcctcctctcgcgccacctccaacaaa 135 | ||||||||||||||||| || | |||||||||||||| Sbjct: 1074 tacctgctgaggagcctccccttcccccacctccaacaaa 1113 Score = 79.8 bits (40), Expect = 6e-12 Identities = 85/100 (85%) Strand = Plus / Plus Query: 254 gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgtc 313 |||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 1229 gggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgtt 1288 Query: 314 cggtccagatatgtggacacattcaataaggctggtgcaa 353 | || ||||| || |||||||| || |||| |||||||| Sbjct: 1289 agatcaagatacgtcgacacatttaacaagggtggtgcaa 1328
>gb|AC137077.26| Medicago truncatula clone mth2-8g15, complete sequence Length = 138303 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 41 aacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctga 93 ||||||||||| || || |||||||||||| |||||||||||||||||||||| Sbjct: 1405 aacaagttttattatgacgaaaagctgaagagatgggtagaggaaggtgctga 1353
>emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g10, COMPLETE SEQUENCE Length = 153273 Score = 73.8 bits (37), Expect = 4e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 41 aacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctga 93 ||||||||||| || || |||||||||||| |||||||||||||||||||||| Sbjct: 146105 aacaagttttattatgacgaaaagctgaagagatgggtagaggaaggtgctga 146053
>gb|AF149806.1| Oryza sativa hypothetical protein, fertilin alpha subunit, membrane protein homolog, and Myb-related protein genes, complete cds; and unknown gene Length = 33178 Score = 71.9 bits (36), Expect = 1e-09 Identities = 84/100 (84%) Strand = Plus / Minus Query: 36 aacagaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctgaga 95 |||| |||||||| ||||| || | ||||||||||| ||||| || ||||||||||| | Sbjct: 12973 aacaaaacaagttctactatgacaagaagctgaagcggtgggtggaagaaggtgctgaca 12914 Query: 96 ttcctgctgaggagcctcctctcgcgccacctccaacaaa 135 | |||| |||||||||||| || | |||||||||||||| Sbjct: 12913 tacctgttgaggagcctccccttcccccacctccaacaaa 12874 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 254 gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgt 312 |||||||||||||| ||||| ||||||||||| ||||| || |||||||| |||||||| Sbjct: 12758 gggatgccaccaatgccacctagccagaaccaattctcagcacgtggacggatgggtgt 12700
>gb|BT018888.1| Zea mays clone EL01T0205G11.d mRNA sequence Length = 1902 Score = 65.9 bits (33), Expect = 9e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 254 gggatgccaccaattccacccagccagaaccagttctctgctcgtggacgaatgggtgtc 313 ||||||||||| || ||||||| ||||||||||||||| || |||||| | |||||||| Sbjct: 956 gggatgccaccgatgccacccacccagaaccagttctcagcacgtggaaggatgggtgtt 1015 Query: 314 cggtccagatatgtgga 330 | || ||||||||||| Sbjct: 1016 agatcaagatatgtgga 1032 Score = 65.9 bits (33), Expect = 9e-08 Identities = 68/79 (86%), Gaps = 3/79 (3%) Strand = Plus / Plus Query: 3 ttgtttcaaaatc---ccgccaggcaaaattagggcaacagaacaagttttactacgatg 59 ||||||||||||| |||||||||||| ||||| ||||||||||||| ||||| || | Sbjct: 729 ttgtttcaaaatctcaccgccaggcaaagctaggggaacagaacaagttctactatgacg 788 Query: 60 aaaagctgaagcgatgggt 78 | ||||||||||| ||||| Sbjct: 789 agaagctgaagcggtgggt 807
>dbj|AP006400.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT22I23, TM0281b, complete sequence Length = 48187 Score = 65.9 bits (33), Expect = 9e-08 Identities = 63/73 (86%) Strand = Plus / Minus Query: 21 aggcaaaattagggcaacagaacaagttttactacgatgaaaagctgaagcgatgggtag 80 |||| ||||| ||| || |||||||||| || || |||||||| ||||| ||||||||| Sbjct: 43722 aggctaaattgggggaaaagaacaagttctattatgatgaaaacctgaaaagatgggtag 43663 Query: 81 aggaaggtgctga 93 ||||||||||||| Sbjct: 43662 aggaaggtgctga 43650
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 39 agaacaagttttactacgatgaaaagctgaagcgatgggt 78 ||||||| |||||||||||||||||||||||||| ||||| Sbjct: 1138501 agaacaacttttactacgatgaaaagctgaagcgctgggt 1138540
>ref|NM_211930.1| Eremothecium gossypii AGR202Wp (AGR202W), mRNA Length = 6819 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 39 agaacaagttttactacgatgaaaagctgaagcgatgggt 78 ||||||| |||||||||||||||||||||||||| ||||| Sbjct: 6392 agaacaacttttactacgatgaaaagctgaagcgctgggt 6431
>gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete sequence Length = 130194 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 39 agaacaagttttactacgatgaaaagctgaagcgatgggtagaggaaggtgctg 92 |||||||||| || || |||||||| || || ||||||||||||||||||||| Sbjct: 9905 agaacaagttctattatgatgaaaacctaaaaagatgggtagaggaaggtgctg 9958
>emb|BX324172.22| Zebrafish DNA sequence from clone DKEYP-86D6 in linkage group 13, complete sequence Length = 184555 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 90 ctgagattcctgctgaggagcc 111 |||||||||||||||||||||| Sbjct: 147888 ctgagattcctgctgaggagcc 147867
>ref|XM_686368.1| PREDICTED: Danio rerio hypothetical protein LOC563004 (LOC563004), mRNA Length = 1917 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Plus Query: 90 ctgagattcctgctgaggagcc 111 |||||||||||||||||||||| Sbjct: 350 ctgagattcctgctgaggagcc 371
>gb|AC112223.2| Homo sapiens chromosome 3 clone RP11-237P23, complete sequence Length = 166745 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 tcagatcatggtttggggatg 259 ||||||||||||||||||||| Sbjct: 51644 tcagatcatggtttggggatg 51664
>ref|NM_124121.2| Arabidopsis thaliana unknown protein AT5G47480 mRNA, complete cds Length = 4345 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 281 aaccagttctctgctcgtggacgaatgggtgt 312 ||||| ||||| ||||||||||| |||||||| Sbjct: 3532 aaccaattctcagctcgtggacgtatgggtgt 3563
>emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chromosome 9, complete sequence Length = 130718 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 caacaaaatcctcctcatac 148 |||||||||||||||||||| Sbjct: 50987 caacaaaatcctcctcatac 51006
>gb|AY271165.1| Homo sapiens clone SKG02-C06 putative promoter sequence Length = 327 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 caacaaaatcctcctcatac 148 |||||||||||||||||||| Sbjct: 247 caacaaaatcctcctcatac 266
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 attccacccagccagaacca 285 |||||||||||||||||||| Sbjct: 507058 attccacccagccagaacca 507077
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65 Length = 198320 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 atctccaaaacattcagatcatgg 249 |||||||||| ||||||||||||| Sbjct: 27223 atctccaaaaaattcagatcatgg 27200
>emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome 4, BAC clone (ESSA project) Length = 89904 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 atctccaaaacattcagatcatgg 249 |||||||||| ||||||||||||| Sbjct: 74155 atctccaaaaaattcagatcatgg 74132
>emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 clone M3E9 (ESSA project) Length = 80677 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 atctccaaaacattcagatcatgg 249 |||||||||| ||||||||||||| Sbjct: 79185 atctccaaaaaattcagatcatgg 79208
>gb|AC153361.5| Mus musculus BAC clone RP23-291L20 from chromosome 10, complete sequence Length = 212761 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 agtggaatgcatattcctaa 207 |||||||||||||||||||| Sbjct: 153536 agtggaatgcatattcctaa 153517
>gb|AC022267.8|AC022267 Homo sapiens BAC clone RP11-407H18 from 4, complete sequence Length = 199472 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aaacattcagatcatggttt 252 |||||||||||||||||||| Sbjct: 95466 aaacattcagatcatggttt 95447
>dbj|AB025628.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNJ7 Length = 80117 Score = 40.1 bits (20), Expect = 4.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 281 aaccagttctctgctcgtggacgaatgggtgt 312 ||||| ||||| ||||||||||| |||||||| Sbjct: 22253 aaccaattctcagctcgtggacgtatgggtgt 22284
>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13 Length = 85992 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 atctccaaaacattcagatcatgg 249 |||||||||| ||||||||||||| Sbjct: 38077 atctccaaaaaattcagatcatgg 38100
>emb|AL929443.4| Mouse DNA sequence from clone RP23-467A7 on chromosome 2, complete sequence Length = 189821 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 caaaatcctcctcataccag 151 |||||||||||||||||||| Sbjct: 62933 caaaatcctcctcataccag 62914 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,259,902 Number of Sequences: 3902068 Number of extensions: 3259902 Number of successful extensions: 63533 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 34 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63419 Number of HSP's gapped (non-prelim): 112 length of query: 370 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 348 effective length of database: 17,147,199,772 effective search space: 5967225520656 effective search space used: 5967225520656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)