ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal17l21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477314.1| Oryza sativa (japonica cultivar-group), mRNA 260 5e-66
2dbj|AK066852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 5e-66
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
4dbj|AP005307.4| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
5dbj|AP003756.5| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
6gb|AY106725.1| Zea mays PCO074056 mRNA sequence 96 2e-16
7ref|NM_101987.2| Arabidopsis thaliana unknown protein AT1G21350 ... 50 0.009
8ref|NM_179363.1| Arabidopsis thaliana unknown protein AT1G21350 ... 50 0.009
9ref|NM_202147.1| Arabidopsis thaliana unknown protein AT1G21350 ... 50 0.009
10gb|BT015113.1| Arabidopsis thaliana At1g21350 gene, complete cds 50 0.009
11emb|BX813605.1|CNS0AEJ8 Arabidopsis thaliana Full-length cDNA Co... 50 0.009
12gb|BT002980.1| Arabidopsis thaliana clone RAFL15-05-P15 (R20443)... 50 0.009
13emb|AL596329.5| Human DNA sequence from clone RP11-179D6 on chro... 44 0.55
14emb|AL390023.8| Human DNA sequence from clone RP5-926E3 on chrom... 44 0.55
15gb|AC161215.6| Mus musculus chromosome 7, clone RP24-185E6, comp... 42 2.2
16gb|AC123998.7| Mus musculus chromosome 5, clone RP24-421H18, com... 42 2.2
17gb|AC162897.4| Mus musculus chromosome 7, clone RP23-371C4, comp... 42 2.2
18emb|CR956629.5| Pig DNA sequence from clone PigE-42A23 on chromo... 42 2.2
19emb|AL157360.8| Human DNA sequence from clone RP11-111C7 on chro... 42 2.2
20gb|AC106798.3| Homo sapiens chromosome 5 clone RP11-434D9, compl... 42 2.2
21gb|AC000100.2| Homo sapiens Chromosome 19 BAC Clone 959a10, comp... 42 2.2
22gb|AC073893.4|AC073893 Homo sapiens BAC clone RP11-978G18 from Y... 42 2.2
23emb|AL112503.1|CNS01A5B Botrytis cinerea strain T4 cDNA library 42 2.2
24gb|AC010682.3| Homo sapiens BAC clone RP11-251M8 from Y, complet... 42 2.2
25gb|AC007464.4| Homo sapiens BAC clone RP11-542B5 from 2, complet... 42 2.2
26ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 42 2.2
27gb|AC005076.2|AC005076 Homo sapiens BAC clone CTA-227L24 from 7q... 42 2.2
28emb|AL935167.8| Zebrafish DNA sequence from clone CH211-186G6 in... 42 2.2
29gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.5
30gb|AY915216.1| Schistosoma japonicum SJCHGC03622 protein mRNA, p... 40 8.5
31ref|XM_566889.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 8.5
32gb|BT022152.1| Drosophila melanogaster IP01423 full insert cDNA 40 8.5
33gb|AC162919.5| Mus musculus BAC clone RP23-365O8 from chromosome... 40 8.5
34gb|AC140026.11| Medicago truncatula clone mth2-36j24, complete s... 40 8.5
35emb|AL606527.6| Human DNA sequence from clone RP11-454G24 on chr... 40 8.5
36emb|AL391841.17| Human DNA sequence from clone RP11-123G14 on ch... 40 8.5
37emb|AL389915.19| Human DNA sequence from clone RP11-438P9 on chr... 40 8.5
38emb|AL390732.10| Human DNA sequence from clone RP11-439N12 on ch... 40 8.5
39emb|AL356100.8| Human DNA sequence from clone RP11-359H22 on chr... 40 8.5
40emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11... 40 8.5
41gb|AC092053.3| Homo sapiens chromosome 3 clone RP11-331G2, compl... 40 8.5
42gb|AF461416.1| Drosophila melanogaster gcm-motif transcription f... 40 8.5
43gb|AC162391.9| Mus musculus 6 BAC RP23-126H2 (Roswell Park Cance... 40 8.5
44gb|AC103559.2| Homo sapiens chromosome 3 clone RP11-286L5, compl... 40 8.5
45gb|AC104850.2| Homo sapiens chromosome 3 clone RP11-241K18, comp... 40 8.5
46ref|NM_205947.1| Drosophila melanogaster gcm2 CG3858-RB, transcr... 40 8.5
47gb|AC093431.2| Homo sapiens chromosome 1 clone RP11-574N2, compl... 40 8.5
48gb|AC114288.2| Homo sapiens chromosome 5 clone CTD-2373J16, comp... 40 8.5
49ref|NM_135458.3| Drosophila melanogaster gcm2 CG3858-RA, transcr... 40 8.5
50gb|AC008948.8| Homo sapiens chromosome 5 clone CTD-2333K2, compl... 40 8.5
51gb|AF184664.1|AF184664 Drosophila melanogaster Glide2 mRNA, comp... 40 8.5
52gb|AC154357.2| Mus musculus BAC clone RP23-192E11 from chromosom... 40 8.5
53gb|AC092632.2| Homo sapiens BAC clone RP11-337B18 from 2, comple... 40 8.5
54dbj|AB063285.1| Homo sapiens HLCS gene for holocarboxylase synth... 40 8.5
55emb|AJ001863.1|HS001863 Homo Sapiens mRNA partial cDNA sequence ... 40 8.5
56gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, r... 40 8.5
57gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34... 40 8.5
58dbj|AP001727.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.5
59gb|AC106797.2| Homo sapiens chromosome 5 clone RP11-433I2, compl... 40 8.5
60gb|AC161256.3| Mus musculus BAC clone RP24-70H20 from chromosome... 40 8.5
61emb|AL772258.9| Mouse DNA sequence from clone RP23-337P24 on chr... 40 8.5
62emb|AL807238.5| Mouse DNA sequence from clone RP23-476F6 on chro... 40 8.5
63emb|AL928658.6| Mouse DNA sequence from clone RP23-238A18 on chr... 40 8.5
64dbj|AB056467.1| Drosophila melanogaster gcm2 mRNA for transcript... 40 8.5
65dbj|AP000698.1| Homo sapiens genomic DNA, chromosome 21q22.2, co... 40 8.5 
>ref|XM_477314.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1250

 Score =  260 bits (131), Expect = 5e-66
 Identities = 242/279 (86%)
 Strand = Plus / Plus

                                                                       
Query: 20  gcaaaattgtttaaatacccttttccttatttgtatgatgagtctcaagaagttgccaag 79
           |||||||||| ||||||| |||| || ||| | ||||||||||||||||||||||| || 
Sbjct: 523 gcaaaattgtataaatactctttcccgtatctatatgatgagtctcaagaagttgctaaa 582

                                                                       
Query: 80  gattttagagcagtctgcacaccagagttttacttgttcaaaaaagatgggcgaaggcca 139
           | |||| |||| |||||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 583 gcttttcgagccgtctgcacgccagagttttacttgttcaaaaaggatggacgaaggcca 642

                                                                       
Query: 140 tttgaacttttttaccacgggcagtttgatgattcaagaccgagtaacaatgtgccagtt 199
           ||||| ||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 643 tttgagcttttctaccatgggcagtttgacgattcaagaccgagtaacaacgtgccagtt 702

                                                                       
Query: 200 acaggaagagatttaagccgcgcaatcgactgtgcacttagtggccaagaattgccgttc 259
           || ||||| |||||||| || || || || |||||||||||||| |||||  | || || 
Sbjct: 703 accggaagggatttaagtcgtgcgattgattgtgcacttagtggacaagagctacctttt 762

                                                  
Query: 260 gaccaaaaaccaagtgtcgggtgcagcatcaagtggcac 298
           |  | |||||| |||||||||||||||||||| ||||||
Sbjct: 763 gtgccaaaacccagtgtcgggtgcagcatcaaatggcac 801
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>dbj|AK066852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013077B21, full
           insert sequence
          Length = 1250

 Score =  260 bits (131), Expect = 5e-66
 Identities = 242/279 (86%)
 Strand = Plus / Plus

                                                                       
Query: 20  gcaaaattgtttaaatacccttttccttatttgtatgatgagtctcaagaagttgccaag 79
           |||||||||| ||||||| |||| || ||| | ||||||||||||||||||||||| || 
Sbjct: 523 gcaaaattgtataaatactctttcccgtatctatatgatgagtctcaagaagttgctaaa 582

                                                                       
Query: 80  gattttagagcagtctgcacaccagagttttacttgttcaaaaaagatgggcgaaggcca 139
           | |||| |||| |||||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct: 583 gcttttcgagccgtctgcacgccagagttttacttgttcaaaaaggatggacgaaggcca 642

                                                                       
Query: 140 tttgaacttttttaccacgggcagtttgatgattcaagaccgagtaacaatgtgccagtt 199
           ||||| ||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 643 tttgagcttttctaccatgggcagtttgacgattcaagaccgagtaacaacgtgccagtt 702

                                                                       
Query: 200 acaggaagagatttaagccgcgcaatcgactgtgcacttagtggccaagaattgccgttc 259
           || ||||| |||||||| || || || || |||||||||||||| |||||  | || || 
Sbjct: 703 accggaagggatttaagtcgtgcgattgattgtgcacttagtggacaagagctacctttt 762

                                                  
Query: 260 gaccaaaaaccaagtgtcgggtgcagcatcaagtggcac 298
           |  | |||||| |||||||||||||||||||| ||||||
Sbjct: 763 gtgccaaaacccagtgtcgggtgcagcatcaaatggcac 801
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                           
Query: 125     gatgggcgaaggccatttgaacttttttaccacgggcagtttgatgattcaagaccgagt 184
               ||||| |||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 9134259 gatggacgaaggccatttgagcttttctaccatgggcagtttgacgattcaagaccgagt 9134318

                                      
Query: 185     aacaatgtgccagttacaggaag 207
               ||||| ||||||||||| |||||
Sbjct: 9134319 aacaacgtgccagttaccggaag 9134341



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                           
Query: 60      agtctcaagaagttgccaaggattttagagcagtctgcacaccagagttttacttgttca 119
               |||||||||||||||| || | |||| |||| |||||||| |||||||||||||||||||
Sbjct: 9133579 agtctcaagaagttgctaaagcttttcgagccgtctgcacgccagagttttacttgttca 9133638

                   
Query: 120     aaaa 123
               ||||
Sbjct: 9133639 aaaa 9133642



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 272     agtgtcgggtgcagcatcaagtggcac 298
               |||||||||||||||||||| ||||||
Sbjct: 9134574 agtgtcgggtgcagcatcaaatggcac 9134600
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>dbj|AP005307.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0046D03
          Length = 150554

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                         
Query: 125   gatgggcgaaggccatttgaacttttttaccacgggcagtttgatgattcaagaccgagt 184
             ||||| |||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 17132 gatggacgaaggccatttgagcttttctaccatgggcagtttgacgattcaagaccgagt 17191

                                    
Query: 185   aacaatgtgccagttacaggaag 207
             ||||| ||||||||||| |||||
Sbjct: 17192 aacaacgtgccagttaccggaag 17214



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                         
Query: 60    agtctcaagaagttgccaaggattttagagcagtctgcacaccagagttttacttgttca 119
             |||||||||||||||| || | |||| |||| |||||||| |||||||||||||||||||
Sbjct: 16452 agtctcaagaagttgctaaagcttttcgagccgtctgcacgccagagttttacttgttca 16511

                 
Query: 120   aaaa 123
             ||||
Sbjct: 16512 aaaa 16515



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 272   agtgtcgggtgcagcatcaagtggcac 298
             |||||||||||||||||||| ||||||
Sbjct: 17447 agtgtcgggtgcagcatcaaatggcac 17473
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>dbj|AP003756.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1370_E02
          Length = 128326

 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                          
Query: 125    gatgggcgaaggccatttgaacttttttaccacgggcagtttgatgattcaagaccgagt 184
              ||||| |||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 124666 gatggacgaaggccatttgagcttttctaccatgggcagtttgacgattcaagaccgagt 124725

                                     
Query: 185    aacaatgtgccagttacaggaag 207
              ||||| ||||||||||| |||||
Sbjct: 124726 aacaacgtgccagttaccggaag 124748



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                          
Query: 60     agtctcaagaagttgccaaggattttagagcagtctgcacaccagagttttacttgttca 119
              |||||||||||||||| || | |||| |||| |||||||| |||||||||||||||||||
Sbjct: 123986 agtctcaagaagttgctaaagcttttcgagccgtctgcacgccagagttttacttgttca 124045

                  
Query: 120    aaaa 123
              ||||
Sbjct: 124046 aaaa 124049



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 272    agtgtcgggtgcagcatcaagtggcac 298
              |||||||||||||||||||| ||||||
Sbjct: 124981 agtgtcgggtgcagcatcaaatggcac 125007
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>gb|AY106725.1| Zea mays PCO074056 mRNA sequence
          Length = 547

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 114/135 (84%), Gaps = 1/135 (0%)
 Strand = Plus / Plus

                                                                       
Query: 61  gtctcaagaagttgccaaggattttagagcagtctgcacaccagagttttacttgttcaa 120
           ||||||||| || ||||||| |||| |||| |||||||| |||||||| |||||||||||
Sbjct: 1   gtctcaagaggtagccaaggcttttggagcggtctgcacgccagagttctacttgttcaa 60

                                                                       
Query: 121 aaaagatgggcgaaggccatttgaacttttttaccacgggcagtttgatgattcaagacc 180
           ||| ||||| || | ||   |||||||||| ||||| || ||||| ||||| ||||||||
Sbjct: 61  aaaggatggccgga-gcttnttgaacttttctaccatggacagttcgatgactcaagacc 119

                          
Query: 181 gagtaacaatgtgcc 195
            |||||||| |||||
Sbjct: 120 cagtaacaacgtgcc 134



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 213 taagccgcgcaatcgactgtgcacttagtggccaagaattgccgttcgaccaaaaaccaa 272
           |||||||||| || |||||||| || |||||||||||| |||| || |  ||||| ||||
Sbjct: 153 taagccgcgcgattgactgtgcgctcagtggccaagaactgccctttgtgcaaaagccaa 212

                                     
Query: 273 gtgtcgggtgcagcatcaagtggcac 298
           ||||||| ||||||||||| ||||||
Sbjct: 213 gtgtcggctgcagcatcaaatggcac 238
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>ref|NM_101987.2| Arabidopsis thaliana unknown protein AT1G21350 transcript variant
           AT1G21350.1 mRNA, complete cds
          Length = 1097

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                       
Query: 32  aaatacccttttccttatttgtatgatgagtctcaagaagttgccaaggattttagagca 91
           |||||||| |||||||| || ||||||||||| ||||| ||||| |  || ||| |||| 
Sbjct: 592 aaatacccatttccttacttatatgatgagtcacaagaggttgcaagagaatttggagct 651

                                    
Query: 92  gtctgcacaccagagttttacttgt 116
           || || ||||| ||||||| |||||
Sbjct: 652 gtttgtacacctgagtttttcttgt 676
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>ref|NM_179363.1| Arabidopsis thaliana unknown protein AT1G21350 transcript variant
           AT1G21350.2 mRNA, complete cds
          Length = 1102

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                       
Query: 32  aaatacccttttccttatttgtatgatgagtctcaagaagttgccaaggattttagagca 91
           |||||||| |||||||| || ||||||||||| ||||| ||||| |  || ||| |||| 
Sbjct: 592 aaatacccatttccttacttatatgatgagtcacaagaggttgcaagagaatttggagct 651

                                    
Query: 92  gtctgcacaccagagttttacttgt 116
           || || ||||| ||||||| |||||
Sbjct: 652 gtttgtacacctgagtttttcttgt 676
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>ref|NM_202147.1| Arabidopsis thaliana unknown protein AT1G21350 transcript variant
           AT1G21350.3 mRNA, complete cds
          Length = 1005

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                       
Query: 32  aaatacccttttccttatttgtatgatgagtctcaagaagttgccaaggattttagagca 91
           |||||||| |||||||| || ||||||||||| ||||| ||||| |  || ||| |||| 
Sbjct: 496 aaatacccatttccttacttatatgatgagtcacaagaggttgcaagagaatttggagct 555

                                    
Query: 92  gtctgcacaccagagttttacttgt 116
           || || ||||| ||||||| |||||
Sbjct: 556 gtttgtacacctgagtttttcttgt 580
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>gb|BT015113.1| Arabidopsis thaliana At1g21350 gene, complete cds
          Length = 456

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                       
Query: 32  aaatacccttttccttatttgtatgatgagtctcaagaagttgccaaggattttagagca 91
           |||||||| |||||||| || ||||||||||| ||||| ||||| |  || ||| |||| 
Sbjct: 172 aaatacccatttccttacttatatgatgagtcacaagaggttgcaagagaatttggagct 231

                                    
Query: 92  gtctgcacaccagagttttacttgt 116
           || || ||||| ||||||| |||||
Sbjct: 232 gtttgtacacctgagtttttcttgt 256
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>emb|BX813605.1|CNS0AEJ8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB27ZE08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 898

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                       
Query: 32  aaatacccttttccttatttgtatgatgagtctcaagaagttgccaaggattttagagca 91
           |||||||| |||||||| || ||||||||||| ||||| ||||| |  || ||| |||| 
Sbjct: 389 aaatacccatttccttacttatatgatgagtcacaagaggttgcaagagaatttggagct 448

                                    
Query: 92  gtctgcacaccagagttttacttgt 116
           || || ||||| ||||||| |||||
Sbjct: 449 gtttgtacacctgagtttttcttgt 473
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>gb|BT002980.1| Arabidopsis thaliana clone RAFL15-05-P15 (R20443) unknown protein
           (At1g21350) mRNA, complete cds
          Length = 1115

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                       
Query: 32  aaatacccttttccttatttgtatgatgagtctcaagaagttgccaaggattttagagca 91
           |||||||| |||||||| || ||||||||||| ||||| ||||| |  || ||| |||| 
Sbjct: 593 aaatacccatttccttacttatatgatgagtcacaagaggttgcaagagaatttggagct 652

                                    
Query: 92  gtctgcacaccagagttttacttgt 116
           || || ||||| ||||||| |||||
Sbjct: 653 gtttgtacacctgagtttttcttgt 677
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>emb|AL596329.5| Human DNA sequence from clone RP11-179D6 on chromosome 13, complete
             sequence
          Length = 85563

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 587   tgctgtaataaacatacacatg 608
             ||||||||||||||||||||||
Sbjct: 33595 tgctgtaataaacatacacatg 33616
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>emb|AL390023.8| Human DNA sequence from clone RP5-926E3 on chromosome 1p32.3-34.1
             Contains part of the gene for a novel protein and a
             pseudogene similar to part of ribosomal protein S11
             (RPS11), complete sequence
          Length = 131237

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 587   tgctgtaataaacatacacatg 608
             ||||||||||||||||||||||
Sbjct: 27674 tgctgtaataaacatacacatg 27695
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>gb|AC161215.6| Mus musculus chromosome 7, clone RP24-185E6, complete sequence
          Length = 165330

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 190   tgtgccagttacaggaagaga 210
             |||||||||||||||||||||
Sbjct: 86440 tgtgccagttacaggaagaga 86460
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>gb|AC123998.7| Mus musculus chromosome 5, clone RP24-421H18, complete sequence
          Length = 151344

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 331    gatgattttgtttttctctct 351
              |||||||||||||||||||||
Sbjct: 122484 gatgattttgtttttctctct 122464
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>gb|AC162897.4| Mus musculus chromosome 7, clone RP23-371C4, complete sequence
          Length = 187677

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 190    tgtgccagttacaggaagaga 210
              |||||||||||||||||||||
Sbjct: 127219 tgtgccagttacaggaagaga 127239
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>emb|CR956629.5| Pig DNA sequence from clone PigE-42A23 on chromosome 7, complete
             sequence
          Length = 156529

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 325   caagcagatgattttgttttt 345
             |||||||||||||||||||||
Sbjct: 60764 caagcagatgattttgttttt 60784
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>emb|AL157360.8| Human DNA sequence from clone RP11-111C7 on chromosome 13, complete
              sequence
          Length = 148861

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 587    tgctgtaataaacatacacat 607
              |||||||||||||||||||||
Sbjct: 112312 tgctgtaataaacatacacat 112332
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>gb|AC106798.3| Homo sapiens chromosome 5 clone RP11-434D9, complete sequence
          Length = 172966

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 588   gctgtaataaacatacacatg 608
             |||||||||||||||||||||
Sbjct: 87029 gctgtaataaacatacacatg 87049
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>gb|AC000100.2| Homo sapiens Chromosome 19 BAC Clone 959a10, complete sequence
          Length = 101912

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 587   tgctgtaataaacatacacat 607
             |||||||||||||||||||||
Sbjct: 79213 tgctgtaataaacatacacat 79193
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>gb|AC073893.4|AC073893 Homo sapiens BAC clone RP11-978G18 from Y, complete sequence
          Length = 64450

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 587   tgctgtaataaacatacacat 607
             |||||||||||||||||||||
Sbjct: 16286 tgctgtaataaacatacacat 16266
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>emb|AL112503.1|CNS01A5B Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 20  gcaaaattgtttaaataccct 40
           |||||||||||||||||||||
Sbjct: 594 gcaaaattgtttaaataccct 574
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>gb|AC010682.3| Homo sapiens BAC clone RP11-251M8 from Y, complete sequence
          Length = 145383

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 587   tgctgtaataaacatacacat 607
             |||||||||||||||||||||
Sbjct: 87097 tgctgtaataaacatacacat 87117
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>gb|AC007464.4| Homo sapiens BAC clone RP11-542B5 from 2, complete sequence
          Length = 186187

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    aattgtttaaatacccttttc 44
             |||||||||||||||||||||
Sbjct: 88631 aattgtttaaatacccttttc 88651
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>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 587     tgctgtaataaacatacacat 607
               |||||||||||||||||||||
Sbjct: 3923894 tgctgtaataaacatacacat 3923914



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 587     tgctgtaataaacatacacat 607
               |||||||||||||||||||||
Sbjct: 2124449 tgctgtaataaacatacacat 2124429
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>gb|AC005076.2|AC005076 Homo sapiens BAC clone CTA-227L24 from 7q21.1-q21.2, complete sequence
          Length = 158146

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 588    gctgtaataaacatacacatg 608
              |||||||||||||||||||||
Sbjct: 150798 gctgtaataaacatacacatg 150778
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>emb|AL935167.8| Zebrafish DNA sequence from clone CH211-186G6 in linkage group 16,
              complete sequence
          Length = 137333

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 329    cagatgattttgtttttctct 349
              |||||||||||||||||||||
Sbjct: 109568 cagatgattttgtttttctct 109548
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 318     ttgaggacaagcagatgatt 337
               ||||||||||||||||||||
Sbjct: 1517133 ttgaggacaagcagatgatt 1517114
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>gb|AY915216.1| Schistosoma japonicum SJCHGC03622 protein mRNA, partial cds
          Length = 665

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 489 gttggacattgttttgttgt 508
           ||||||||||||||||||||
Sbjct: 117 gttggacattgttttgttgt 136
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>ref|XM_566889.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNA05670) partial mRNA
          Length = 4182

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  ttgaggacaagcagatgatt 337
            ||||||||||||||||||||
Sbjct: 1575 ttgaggacaagcagatgatt 1556
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>gb|BT022152.1| Drosophila melanogaster IP01423 full insert cDNA
          Length = 2257

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  cacttagtggccaagaattg 253
            ||||||||||||||||||||
Sbjct: 1219 cacttagtggccaagaattg 1200
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>gb|AC162919.5| Mus musculus BAC clone RP23-365O8 from chromosome 6, complete sequence
          Length = 193362

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 224   atcgactgtgcacttagtggccaa 247
             |||| |||||||||||||||||||
Sbjct: 13040 atcgtctgtgcacttagtggccaa 13063
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>gb|AC140026.11| Medicago truncatula clone mth2-36j24, complete sequence
          Length = 162172

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   attttgtttttctctctcga 354
             ||||||||||||||||||||
Sbjct: 91607 attttgtttttctctctcga 91588
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>emb|AL606527.6| Human DNA sequence from clone RP11-454G24 on chromosome 1 Contains a
              alcohol dehydrogenase 5 (class III) chi polypeptide (ADH5)
              pseudogene, complete sequence
          Length = 179964

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 587    tgctgtaataaacatacacatgga 610
              ||||||||| ||||||||||||||
Sbjct: 123659 tgctgtaatgaacatacacatgga 123636
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>emb|AL391841.17| Human DNA sequence from clone RP11-123G14 on chromosome 13 Contains
             part of a novel gene (FLJ22153) and a CpG island, complete
             sequence
          Length = 99441

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 545   cccaaattctacccgtagct 564
             ||||||||||||||||||||
Sbjct: 87367 cccaaattctacccgtagct 87386
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>emb|AL389915.19| Human DNA sequence from clone RP11-438P9 on chromosome 9 Contains a
            ribosomal protein S16 (RPS16) pseudogene, a
            peptidylprolyl isomerase A (cyclophilin A) (PPIA)
            pseudogene and a CpG island, complete sequence
          Length = 199601

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 585  actgctgtaataaacatacacatg 608
            ||||||| ||||||||||||||||
Sbjct: 3982 actgctgcaataaacatacacatg 4005
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>emb|AL390732.10| Human DNA sequence from clone RP11-439N12 on chromosome 9 Contains a
              novel gene similar to mouse 9130404H11Rik protein, the CER1
              gene for cerberus 1 homolog, cysteine knot superfamily
              (Xenopus laevis) and the 3' end of a novel gene (FLJ25416),
              complete sequence
          Length = 143246

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 585    actgctgtaataaacataca 604
              ||||||||||||||||||||
Sbjct: 112032 actgctgtaataaacataca 112013
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>emb|AL356100.8| Human DNA sequence from clone RP11-359H22 on chromosome 10 Contains part
              of a novel gene (KIAA0534), complete sequence
          Length = 190361

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 585    actgctgtaataaacatacacatg 608
              |||||||| |||||||||||||||
Sbjct: 133076 actgctgtgataaacatacacatg 133099
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>emb|AL031122.3|HS503N11 Human DNA sequence from clone RP3-503N11 on chromosome 6p24.1-24.3,
             complete sequence
          Length = 94749

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    attgtttaaatacccttttc 44
             ||||||||||||||||||||
Sbjct: 40986 attgtttaaatacccttttc 41005
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>gb|AC092053.3| Homo sapiens chromosome 3 clone RP11-331G2, complete sequence
          Length = 176593

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 585   actgctgtaataaacataca 604
             ||||||||||||||||||||
Sbjct: 71707 actgctgtaataaacataca 71726
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>gb|AF461416.1| Drosophila melanogaster gcm-motif transcription factor (gcm2) mRNA,
            complete cds
          Length = 2964

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  cacttagtggccaagaattg 253
            ||||||||||||||||||||
Sbjct: 1919 cacttagtggccaagaattg 1900
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>gb|AC162391.9| Mus musculus 6 BAC RP23-126H2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 209173

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 224   atcgactgtgcacttagtggccaa 247
             |||| |||||||||||||||||||
Sbjct: 48352 atcgtctgtgcacttagtggccaa 48329
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>gb|AC103559.2| Homo sapiens chromosome 3 clone RP11-286L5, complete sequence
          Length = 184133

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    gtggcacaagtgaagagttt 311
              ||||||||||||||||||||
Sbjct: 174519 gtggcacaagtgaagagttt 174538
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>gb|AC104850.2| Homo sapiens chromosome 3 clone RP11-241K18, complete sequence
          Length = 173580

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 585  actgctgtaataaacataca 604
            ||||||||||||||||||||
Sbjct: 8652 actgctgtaataaacataca 8633
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>ref|NM_205947.1| Drosophila melanogaster gcm2 CG3858-RB, transcript variant B (gcm2),
            mRNA
          Length = 2924

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  cacttagtggccaagaattg 253
            ||||||||||||||||||||
Sbjct: 1898 cacttagtggccaagaattg 1879
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>gb|AC093431.2| Homo sapiens chromosome 1 clone RP11-574N2, complete sequence
          Length = 164454

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 587   tgctgtaataaacatacacatgga 610
             ||||||||| ||||||||||||||
Sbjct: 56286 tgctgtaatgaacatacacatgga 56309
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>gb|AC114288.2| Homo sapiens chromosome 5 clone CTD-2373J16, complete sequence
          Length = 84270

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   tgctgtaataaacatacaca 606
             ||||||||||||||||||||
Sbjct: 27441 tgctgtaataaacatacaca 27422
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>ref|NM_135458.3| Drosophila melanogaster gcm2 CG3858-RA, transcript variant A (gcm2),
            mRNA
          Length = 2415

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  cacttagtggccaagaattg 253
            ||||||||||||||||||||
Sbjct: 1389 cacttagtggccaagaattg 1370
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>gb|AC008948.8| Homo sapiens chromosome 5 clone CTD-2333K2, complete sequence
          Length = 176656

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 585   actgctgtaataaacatacacatg 608
             ||||||| ||||||||||||||||
Sbjct: 29767 actgctgcaataaacatacacatg 29744
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>gb|AF184664.1|AF184664 Drosophila melanogaster Glide2 mRNA, complete cds
          Length = 2332

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  cacttagtggccaagaattg 253
            ||||||||||||||||||||
Sbjct: 1330 cacttagtggccaagaattg 1311
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>gb|AC154357.2| Mus musculus BAC clone RP23-192E11 from chromosome 9, complete sequence
          Length = 195151

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    cttttccttatttgtatgatgagt 62
             |||||| |||||||||||||||||
Sbjct: 36480 cttttctttatttgtatgatgagt 36503
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>gb|AC092632.2| Homo sapiens BAC clone RP11-337B18 from 2, complete sequence
          Length = 199385

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 587    tgctgtaataaacatacaca 606
              ||||||||||||||||||||
Sbjct: 190348 tgctgtaataaacatacaca 190367
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>dbj|AB063285.1| Homo sapiens HLCS gene for holocarboxylase synthetase, complete cds
          Length = 250000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 371    gaggaggcggcacctatatt 390
              ||||||||||||||||||||
Sbjct: 207546 gaggaggcggcacctatatt 207527
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>emb|AJ001863.1|HS001863 Homo Sapiens mRNA partial cDNA sequence from cDNA selection,
           DCR1-8.0
          Length = 1488

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 gaggaggcggcacctatatt 390
           ||||||||||||||||||||
Sbjct: 368 gaggaggcggcacctatatt 349
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>gb|AC007257.9|AC007257 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone
             BACR24A22, complete sequence
          Length = 183007

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   cacttagtggccaagaattg 253
             ||||||||||||||||||||
Sbjct: 92433 cacttagtggccaagaattg 92452
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>gb|AE003625.3| Drosophila melanogaster chromosome 2L, section 34 of 83 of the complete
              sequence
          Length = 271507

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    cacttagtggccaagaattg 253
              ||||||||||||||||||||
Sbjct: 174272 cacttagtggccaagaattg 174253
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>dbj|AP001727.1| Homo sapiens genomic DNA, chromosome 21q, section 71/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 371  gaggaggcggcacctatatt 390
            ||||||||||||||||||||
Sbjct: 6366 gaggaggcggcacctatatt 6385
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>gb|AC106797.2| Homo sapiens chromosome 5 clone RP11-433I2, complete sequence
          Length = 169265

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 587  tgctgtaataaacatacaca 606
            ||||||||||||||||||||
Sbjct: 3683 tgctgtaataaacatacaca 3664
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>gb|AC161256.3| Mus musculus BAC clone RP24-70H20 from chromosome 9, complete sequence
          Length = 190832

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 489   gttggacattgttttgttgtgtat 512
             ||||||||| ||||||||||||||
Sbjct: 40666 gttggacatagttttgttgtgtat 40643
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>emb|AL772258.9| Mouse DNA sequence from clone RP23-337P24 on chromosome 2, complete
              sequence
          Length = 200480

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 511    attactgacaaagtagcagt 530
              ||||||||||||||||||||
Sbjct: 118023 attactgacaaagtagcagt 118004
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>emb|AL807238.5| Mouse DNA sequence from clone RP23-476F6 on chromosome 4, complete
            sequence
          Length = 169745

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  cttagtggccaagaattgcc 255
            ||||||||||||||||||||
Sbjct: 5308 cttagtggccaagaattgcc 5327
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>emb|AL928658.6| Mouse DNA sequence from clone RP23-238A18 on chromosome 2, complete
              sequence
          Length = 220679

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 596    aaacatacacatggaaatag 615
              ||||||||||||||||||||
Sbjct: 186099 aaacatacacatggaaatag 186118
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>dbj|AB056467.1| Drosophila melanogaster gcm2 mRNA for transcription factor glial
            cells missing 2, complete cds
          Length = 2411

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 234  cacttagtggccaagaattg 253
            ||||||||||||||||||||
Sbjct: 1389 cacttagtggccaagaattg 1370
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>dbj|AP000698.1| Homo sapiens genomic DNA, chromosome 21q22.2, cosmid clone:D8F6,
             CBR1-HLCS region
          Length = 39159

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   gaggaggcggcacctatatt 390
             ||||||||||||||||||||
Sbjct: 31030 gaggaggcggcacctatatt 31049


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,210,982
Number of Sequences: 3902068
Number of extensions: 6210982
Number of successful extensions: 124674
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124438
Number of HSP's gapped (non-prelim): 236
length of query: 625
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 602
effective length of database: 17,143,297,704
effective search space: 10320265217808
effective search space used: 10320265217808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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