ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal18a18 |
|---|---|
| Clone Library Name | barley_pub |
>BGAL_ASPOF (P45582) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 832 Score = 313 bits (802), Expect = 3e-85 Identities = 141/207 (68%), Positives = 171/207 (82%), Gaps = 1/207 (0%) Frame = +2 Query: 2 NTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQ 181 NTCNGFYCD F+P+ ++PK+WTE W+GWF FGGAVP RP ED+AFAVARF Q+GG+ Sbjct: 229 NTCNGFYCDYFSPNKDNKPKMWTEAWTGWFTGFGGAVPQRPAEDMAFAVARFIQKGGSFI 288 Query: 182 NYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIA 361 NYYMYHGGTNFGR++GGPFISTSYDYDAPIDEYGL+RQPKWGHLRD+HKAIK+CEPAL++ Sbjct: 289 NYYMYHGGTNFGRTAGGPFISTSYDYDAPIDEYGLLRQPKWGHLRDLHKAIKLCEPALVS 348 Query: 362 TDPSYMSLGQNAEAHVYKSGSLCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSILPDCKN 541 +P+ SLGQN E++VY+S S CAAFLAN + + TVTFNG Y LP WSVSILPDCK Sbjct: 349 GEPTITSLGQNQESYVYRSKSSCAAFLANFNSRYYATVTFNGMHYNLPPWSVSILPDCKT 408 Query: 542 VVLNTAQINSQVASTQMRNL-GFSTQA 619 V NTA++ +Q + +M+ L GFS +A Sbjct: 409 TVFNTARVGAQTTTMKMQYLGGFSWKA 435
>BGAL_LYCES (P48980) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 835 Score = 290 bits (743), Expect = 2e-78 Identities = 133/218 (61%), Positives = 164/218 (75%), Gaps = 3/218 (1%) Frame = +2 Query: 2 NTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQ 181 NTCNGFYCD FTP+ ++PK+WTE W+ WF FGG VPYRP ED+AFAVARF Q GG+ Sbjct: 226 NTCNGFYCDYFTPNKANKPKMWTEAWTAWFTEFGGPVPYRPAEDMAFAVARFIQTGGSFI 285 Query: 182 NYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIA 361 NYYMYHGGTNFGR+SGGPFI+TSYDYDAP+DE+G +RQPKWGHL+D+H+AIK+CEPAL++ Sbjct: 286 NYYMYHGGTNFGRTSGGPFIATSYDYDAPLDEFGSLRQPKWGHLKDLHRAIKLCEPALVS 345 Query: 362 TDPSYMSLGQNAEAHVYKSGS-LCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSILPDCK 538 DP+ SLG EA V+KS S CAAFLAN + S V F Y LP WS+SILPDCK Sbjct: 346 VDPTVTSLGNYQEARVFKSESGACAAFLANYNQHSFAKVAFGNMHYNLPPWSISILPDCK 405 Query: 539 NVVLNTAQINSQVASTQMR--NLGFSTQASDGSSVEAE 646 N V NTA++ +Q A +M + GFS ++ + + E Sbjct: 406 NTVYNTARVGAQSAQMKMTPVSRGFSWESFNEDAASHE 443
>BGAL_MALDO (P48981) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) (Exo-(1-->4)-beta-D-galactanase) Length = 731 Score = 288 bits (738), Expect = 7e-78 Identities = 128/197 (64%), Positives = 154/197 (78%) Frame = +2 Query: 2 NTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQ 181 +TCNGFYC+ F P+ +PK+WTE W+GW+ FGGAVP RP ED+AF+VARF Q GG+ Sbjct: 228 DTCNGFYCENFKPNKDYKPKMWTEVWTGWYTEFGGAVPTRPAEDVAFSVARFIQSGGSFL 287 Query: 182 NYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIA 361 NYYMYHGGTNFGR++GGPF++TSYDYDAP+DEYGL R+PKWGHLRD+HKAIK CE AL++ Sbjct: 288 NYYMYHGGTNFGRTAGGPFMATSYDYDAPLDEYGLPREPKWGHLRDLHKAIKSCESALVS 347 Query: 362 TDPSYMSLGQNAEAHVYKSGSLCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSILPDCKN 541 DPS LG N EAHV+KS S CAAFLAN D + V+F G Y LP WS+SILPDCK Sbjct: 348 VDPSVTKLGSNQEAHVFKSESDCAAFLANYDAKYSVKVSFGGGQYDLPPWSISILPDCKT 407 Query: 542 VVLNTAQINSQVASTQM 592 V NTA++ SQ + QM Sbjct: 408 EVYNTAKVGSQSSQVQM 424
>BGAL_DIACA (Q00662) Putative beta-galactosidase precursor (EC 3.2.1.23)| (Lactase) (SR12 protein) Length = 731 Score = 264 bits (675), Expect = 1e-70 Identities = 118/190 (62%), Positives = 149/190 (78%), Gaps = 1/190 (0%) Frame = +2 Query: 2 NTCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQ 181 +TCNGFYC+ F P S+PK+WTENW+GW+ +G VPYRP ED+AF+VARF Q GG+ Sbjct: 234 DTCNGFYCEGFVPKDKSKPKMWTENWTGWYTEYGKPVPYRPAEDVAFSVARFIQNGGSFM 293 Query: 182 NYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIA 361 NYYM+HGGTNF ++ G F+STSYDYDAP+DEYGL R+PK+ HL+++HKAIKMCEPAL++ Sbjct: 294 NYYMFHGGTNF-ETTAGRFVSTSYDYDAPLDEYGLPREPKYTHLKNLHKAIKMCEPALVS 352 Query: 362 TDPSYMSLGQNAEAHVYKSGS-LCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSILPDCK 538 +D +LG N EAHVY S S CAAFLAN D + VTF+G ++LPAWS+SILPDCK Sbjct: 353 SDAKVTNLGSNQEAHVYSSNSGSCAAFLANYDPKWSVKVTFSGMEFELPAWSISILPDCK 412 Query: 539 NVVLNTAQIN 568 V NTA++N Sbjct: 413 KEVYNTARVN 422
>BGAL_BRAOL (P49676) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 828 Score = 256 bits (654), Expect = 4e-68 Identities = 111/192 (57%), Positives = 141/192 (73%) Frame = +2 Query: 5 TCNGFYCDQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQN 184 TCNGFYCDQ+ PS PS PK+WTENW+GWF ++GG PYR EDLAF+VARF+Q GGT QN Sbjct: 230 TCNGFYCDQYKPSNPSSPKMWTENWTGWFKNWGGKHPYRTAEDLAFSVARFFQTGGTFQN 289 Query: 185 YYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIAT 364 YYMYHGGTNFGR +GGP+I+TSYDYDAP+DEYG + QPKWGHL+ +H +K E L Sbjct: 290 YYMYHGGTNFGRVAGGPYITTSYDYDAPLDEYGNLNQPKWGHLKQLHTLLKSMEKPLTYG 349 Query: 365 DPSYMSLGQNAEAHVYKSGSLCAAFLANIDDQSDKTVTFNGKAYKLPAWSVSILPDCKNV 544 + S + LG + A VY + + F+ N++ +D V F GK Y +PAWSVS+LPDC Sbjct: 350 NISTIDLGNSVTATVYSTNEKSSCFIGNVNATADALVNFKGKDYNVPAWSVSVLPDCDKE 409 Query: 545 VLNTAQINSQVA 580 NTA++N+Q + Sbjct: 410 AYNTARVNTQTS 421
>BGAL_XANMN (P48982) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| Length = 598 Score = 53.9 bits (128), Expect = 4e-07 Identities = 39/119 (32%), Positives = 57/119 (47%), Gaps = 11/119 (9%) Frame = +2 Query: 26 DQFTPSLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVA-RFYQRGGTLQNYYMYHG 202 D+ P +P++ E W+GWF +G P+ T+ A + R G N YM+ G Sbjct: 245 DKLIKFRPDQPRMVGEYWAGWFDHWGK--PHAATDARQQAEEFEWILRQGHSANLYMFIG 302 Query: 203 GTNFGRSSGGPF----------ISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEP 349 GT+FG +G F +TSYDYDA +DE G PK+ +RD + +P Sbjct: 303 GTSFGFMNGANFQNNPSDHYAPQTTSYDYDAILDEAG-HPTPKFALMRDAIARVTGVQP 360
>BGAL_HUMAN (P16278) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 677 Score = 51.2 bits (121), Expect = 3e-06 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 4/114 (3%) Frame = +2 Query: 47 PSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQNYYMYHGGTNFGRSS 226 P P + +E ++GW +G TE +A ++ RG ++ N YM+ GGTNF + Sbjct: 260 PKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASV-NLYMFIGGTNFAYWN 318 Query: 227 GG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIATDPSY 376 G P+ + TSYDYDAP+ E G + + + + K K+ E + + P + Sbjct: 319 GANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKF 372
>BGAM_HUMAN (P16279) Beta-galactosidase-related protein precursor| (Beta-galactosidase-like protein) (S-Gal) (Elastin-binding protein) (EBP) Length = 546 Score = 51.2 bits (121), Expect = 3e-06 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 4/114 (3%) Frame = +2 Query: 47 PSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQNYYMYHGGTNFGRSS 226 P P + +E ++GW +G TE +A ++ RG ++ N YM+ GGTNF + Sbjct: 129 PKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILARGASV-NLYMFIGGTNFAYWN 187 Query: 227 GG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIATDPSY 376 G P+ + TSYDYDAP+ E G + + + + K K+ E + + P + Sbjct: 188 GANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKFEKVPEGPIPPSTPKF 241
>BGAL_MACFA (Q60HF6) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 682 Score = 50.8 bits (120), Expect = 3e-06 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 4/114 (3%) Frame = +2 Query: 47 PSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQNYYMYHGGTNFGRSS 226 P P + +E ++GW +G TE +A ++ RG ++ N YM+ GGTNF + Sbjct: 260 PKGPLINSEFYTGWLDHWGQPHSTIKTEVVASSLYDILARGASV-NLYMFIGGTNFAYWN 318 Query: 227 GG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIATDPSY 376 G P+ + TSYDYDAP+ E G + + + + K K+ E + + P + Sbjct: 319 GANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNVIQKFEKVPEGPIPPSTPKF 372
>BGAL_MOUSE (P23780) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 647 Score = 50.1 bits (118), Expect = 6e-06 Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 4/101 (3%) Frame = +2 Query: 47 PSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQNYYMYHGGTNFGRSS 226 P P + +E ++GW +G T+ LA ++ RG + N YM+ GGTNF + Sbjct: 261 PKGPLINSEFYTGWLDHWGKPHSTVKTKTLATSLYNLLARGANV-NLYMFIGGTNFAYWN 319 Query: 227 GG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIK 337 G P+ TSYDYDAP+ E G + + K+ LR+V + K Sbjct: 320 GANTPYEPQPTSYDYDAPLSEAGDLTK-KYFALREVIQMFK 359
>BGAL_CANFA (Q9TRY9) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 668 Score = 47.4 bits (111), Expect = 4e-05 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 4/123 (3%) Frame = +2 Query: 41 SLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQNYYMYHGGTNFGR 220 S P P + +E ++GW +G TE +A ++ G + N YM+ GGTNF Sbjct: 259 SEPKGPLVNSEFYTGWLDHWGQPHSTVRTEVVASSLHDILAHGANV-NLYMFIGGTNFAY 317 Query: 221 SSGG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIATDPSYMSLG 388 +G P+ + TSYDYDAP+ E G + + K+ LR+V + + I + G Sbjct: 318 WNGANMPYQAQPTSYDYDAPLSEAGDLTE-KYFALREVIRKFEKVPEGFIPPSTPKFAYG 376 Query: 389 QNA 397 + A Sbjct: 377 KVA 379
>BGAL_FELCA (O19015) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid| beta-galactosidase) Length = 669 Score = 46.6 bits (109), Expect = 6e-05 Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 4/123 (3%) Frame = +2 Query: 41 SLPSRPKLWTENWSGWFLSFGGAVPYRPTEDLAFAVARFYQRGGTLQNYYMYHGGTNFGR 220 S P P + +E ++GW +G TE +A ++ G + N YM+ GGTNF Sbjct: 259 SEPRGPLVNSEFYTGWLDHWGQPHSRVRTEVVASSLHDVLAHGANV-NLYMFIGGTNFAY 317 Query: 221 SSGG--PFIS--TSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPALIATDPSYMSLG 388 +G P+ TSYDYDAP+ E G + K+ LRDV + + I + G Sbjct: 318 WNGANIPYQPQPTSYDYDAPLSEAGDLTD-KYFALRDVIRKFEKVPEGFIPPSTPKFAYG 376 Query: 389 QNA 397 + A Sbjct: 377 KVA 379
>SYFB_NOVAD (Q2GAI7) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 796 Score = 38.1 bits (87), Expect = 0.022 Identities = 23/79 (29%), Positives = 33/79 (41%) Frame = +2 Query: 296 PKWGHLRDVHKAIKMCEPALIATDPSYMSLGQNAEAHVYKSGSLCAAFLANIDDQSDKTV 475 PKW L+D K+ + + +Y+ LG AH Y L A +A + + + Sbjct: 230 PKW--LQDYLKSAGQRPISALVDITNYVMLGYGRPAHAYDVAKLSGAVVARKAREGETCL 287 Query: 476 TFNGKAYKLPAWSVSILPD 532 NGK Y L W I D Sbjct: 288 ALNGKEYGLQPWMTVIADD 306
>BGAL_ASPNG (P29853) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase)| (Tilactase) (Lactase-N) Length = 1006 Score = 35.8 bits (81), Expect = 0.11 Identities = 22/75 (29%), Positives = 37/75 (49%) Frame = +2 Query: 176 LQNYYMYHGGTNFGRSSGGPFISTSYDYDAPIDEYGLVRQPKWGHLRDVHKAIKMCEPAL 355 + N YM GGTN+G + G P TSYDY + + E + + K+ L+ + K+ P Sbjct: 338 IMNLYMIFGGTNWG-NLGYPNGYTSYDYGSAVTESRNITREKYSELKLLGNFAKV-SPGY 395 Query: 356 IATDPSYMSLGQNAE 400 + P ++ A+ Sbjct: 396 LTASPGNLTTSGYAD 410
>UBP49_HUMAN (Q70CQ1) Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15)| (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49) Length = 688 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = -2 Query: 612 VLNPRFLICVD-AT*ELIWAVLSTTFLQSGRMLTDHA 505 +LNP+ C++ AT E +WA L + + GR + DHA Sbjct: 18 ILNPQKWCCLECATTESVWACLKCSHVACGRYIEDHA 54
>UBP44_HUMAN (Q9H0E7) Ubiquitin carboxyl-terminal hydrolase 44 (EC 3.1.2.15)| (Ubiquitin thioesterase 44) (Ubiquitin-specific-processing protease 44) (Deubiquitinating enzyme 44) Length = 712 Score = 31.6 bits (70), Expect = 2.1 Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = -2 Query: 609 LNPRFLICVDA-T*ELIWAVLSTTFLQSGRMLTDHA 505 LNP+ CVD T E IWA LS + + GR + +HA Sbjct: 22 LNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHA 57
>AMOL1_HUMAN (Q8IY63) Angiomotin-like protein 1| Length = 956 Score = 30.8 bits (68), Expect = 3.6 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Frame = +2 Query: 122 PTEDLAFAVARFY--------QRGGTLQNYYMYHGGTNFGRSSGGPFISTSYDYDAPIDE 277 PT + A A ++F+ Q+G YYM G + R+ G P ++ + A DE Sbjct: 189 PTYEEAKAQSQFFRGQQQQQQQQGAVGHGYYMAGGTSQKSRTEGRPTVNRANSGQAHKDE 248 Query: 278 YGLVRQPKWGHLRDVHKAI 334 +++ K GH+R + + I Sbjct: 249 --ALKELKQGHVRSLSERI 265
>TOLB_RICTY (Q68X69) Protein tolB precursor| Length = 443 Score = 30.4 bits (67), Expect = 4.7 Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 8/128 (6%) Frame = +2 Query: 155 FYQRGGTLQNYYMYHGGTNFGRSSG-GPFISTSY-DYDAPIDEYGLVRQPKWG--HLRDV 322 FY T +Y G+ S G F+ S+ +P + ++ K G H+ ++ Sbjct: 213 FYVSYATKSRALVYEKDLKTGKESVVGDFVGISFAPRFSPDGKKAVMSIAKNGSTHIYEI 272 Query: 323 HKAIKMCEPAL----IATDPSYMSLGQNAEAHVYKSGSLCAAFLANIDDQSDKTVTFNGK 490 A K I T PSY G+ + K+G + ++ N D + ++F G Sbjct: 273 DLATKQLNKLTDGFGINTSPSYSPDGKKIVYNSDKNG-VPQLYIMNSDGSDVRRISFGGG 331 Query: 491 AYKLPAWS 514 +Y P+WS Sbjct: 332 SYASPSWS 339
>UBP49_MOUSE (Q6P9L4) Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15)| (Ubiquitin thioesterase 49) (Ubiquitin-specific-processing protease 49) (Deubiquitinating enzyme 49) Length = 685 Score = 29.6 bits (65), Expect = 8.0 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -2 Query: 612 VLNPRFLICVD-AT*ELIWAVLSTTFLQSGRMLTDHA 505 +LNP+ C+ AT E WA L + + GR + DHA Sbjct: 18 ILNPQKWCCLQCATTESAWACLKCSHVACGRYIEDHA 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,695,266 Number of Sequences: 219361 Number of extensions: 1705756 Number of successful extensions: 4203 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 4058 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4190 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
