ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal18a06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1183 bits (597), Expect = 0.0 Identities = 604/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119586 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119528 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119527 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119468 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119467 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119408 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119407 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 119348 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119347 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 119288 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119287 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119228 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119227 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 119168 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119167 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 119108 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119107 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 119048 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119047 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118988 Query: 620 gacag 624 ||||| Sbjct: 118987 gacag 118983 Score = 1183 bits (597), Expect = 0.0 Identities = 604/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95308 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95366 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95367 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95426 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95427 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95486 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95487 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 95546 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95547 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 95606 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95607 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 95666 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95667 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 95726 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95727 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 95786 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95787 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 95846 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95847 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 95906 Query: 620 gacag 624 ||||| Sbjct: 95907 gacag 95911
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118367 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 118309 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118308 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 118249 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118248 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 118189 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118188 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 118129 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118128 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 118069 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118068 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 118009 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118008 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 117949 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117948 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 117889 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117888 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 117829 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117828 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 117769 Query: 620 gacag 624 ||||| Sbjct: 117768 gacag 117764
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119451 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119393 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119392 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119333 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119332 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119273 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119272 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 119213 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119212 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 119153 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119152 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119093 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119092 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 119033 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119032 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 118973 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118972 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 118913 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118912 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118853 Query: 620 gacag 624 ||||| Sbjct: 118852 gacag 118848 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95705 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95763 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95764 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95823 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95824 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95883 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95884 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 95943 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95944 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 96003 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96004 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 96063 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96064 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 96123 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96124 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 96183 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96184 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 96243 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96244 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 96303 Query: 620 gacag 624 ||||| Sbjct: 96304 gacag 96308
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119451 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119393 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119392 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119333 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119332 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119273 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119272 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 119213 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119212 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 119153 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119152 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119093 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119092 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 119033 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119032 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 118973 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118972 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 118913 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118912 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118853 Query: 620 gacag 624 ||||| Sbjct: 118852 gacag 118848 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95705 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95763 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95764 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95823 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95824 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95883 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95884 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 95943 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95944 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 96003 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96004 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 96063 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96064 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 96123 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96124 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 96183 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96184 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 96243 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96244 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 96303 Query: 620 gacag 624 ||||| Sbjct: 96304 gacag 96308
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119400 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119342 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119341 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119282 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119281 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119222 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119221 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 119162 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119161 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 119102 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119101 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119042 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119041 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 118982 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118981 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 118922 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118921 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 118862 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118861 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118802 Query: 620 gacag 624 ||||| Sbjct: 118801 gacag 118797 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95650 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95708 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95709 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95768 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95769 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95828 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95829 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 95888 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95889 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 95948 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95949 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 96008 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96009 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 96068 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96069 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 96128 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96129 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 96188 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96189 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 96248 Query: 620 gacag 624 ||||| Sbjct: 96249 gacag 96253
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508283 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 31508341 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508342 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 31508401 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508402 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 31508461 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508462 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 31508521 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508522 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 31508581 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508582 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 31508641 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508642 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 31508701 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508702 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 31508761 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508762 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 31508821 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508822 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 31508881 Query: 620 gacag 624 ||||| Sbjct: 31508882 gacag 31508886 Score = 202 bits (102), Expect = 1e-48 Identities = 102/102 (100%) Strand = Plus / Minus Query: 523 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 583 aatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacag 11513216 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 539 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 598 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 599 taaaggaggtggggg 613 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 542 gtcgagagggaaacagcccggatcaccagctaaggccc 579 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 441 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 495 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84313 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 84255 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84254 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 84195 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84194 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 84135 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84134 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 84075 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84074 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 84015 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84014 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 83955 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83954 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 83895 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83894 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 83835 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83834 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 83775 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83774 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 83715 Query: 620 gacag 624 ||||| Sbjct: 83714 gacag 83710
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119420 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119362 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119361 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119302 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119301 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119242 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119241 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 119182 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119181 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 119122 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119121 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119062 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119061 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 119002 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119001 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 118942 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118941 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 118882 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118881 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118822 Query: 620 gacag 624 ||||| Sbjct: 118821 gacag 118817 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95698 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95756 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95757 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95816 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95817 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95876 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95877 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 95936 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95937 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 95996 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95997 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 96056 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96057 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 96116 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96117 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 96176 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96177 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 96236 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96237 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 96296 Query: 620 gacag 624 ||||| Sbjct: 96297 gacag 96301
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14472 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 14530 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14531 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 14590 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14591 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 14650 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14651 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 14710 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14711 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 14770 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14771 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 14830 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14831 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 14890 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14891 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 14950 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14951 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 15010 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15011 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 15070 Query: 620 gacag 624 ||||| Sbjct: 15071 gacag 15075 Score = 1152 bits (581), Expect = 0.0 Identities = 601/605 (99%), Gaps = 2/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122747 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 122805 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122806 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 122865 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122866 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 122925 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 122926 catagggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggat 122984 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122985 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 123044 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123045 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 123104 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123105 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 123164 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123165 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 123224 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123225 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 123284 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123285 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 123344 Query: 620 gacag 624 ||||| Sbjct: 123345 gacag 123349
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141280 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 141338 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141339 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 141398 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141399 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 141458 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141459 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 141518 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141519 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 141578 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141579 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 141638 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141639 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 141698 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141699 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 141758 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141759 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 141818 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141819 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 141878 Query: 620 gacag 624 ||||| Sbjct: 141879 gacag 141883
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58139 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 58081 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58080 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 58021 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58020 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 57961 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57960 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 57901 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57900 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 57841 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57840 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 57781 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57780 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 57721 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57720 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 57661 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57660 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 57601 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57600 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 57541 Query: 620 gacag 624 ||||| Sbjct: 57540 gacag 57536
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268632 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 9268690 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268691 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9268750 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268751 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 9268810 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268811 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 9268870 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268871 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 9268930 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268931 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 9268990 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268991 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 9269050 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269051 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 9269110 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269111 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 9269170 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269171 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 9269230 Query: 620 gacag 624 ||||| Sbjct: 9269231 gacag 9269235 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056546 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 9056604 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056605 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9056664 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056665 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 9056724 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056725 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 9056784 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056785 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 9056844 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056845 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 9056904 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056905 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 9056964 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056965 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 9057024 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057025 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 9057084 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057085 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 9057144 Query: 620 gacag 624 ||||| Sbjct: 9057145 gacag 9057149 Score = 1168 bits (589), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228132 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 9228190 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228191 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9228250 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228251 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 9228310 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 9228311 catagggcgattgtcactgcttatggacccgaacctaggtgatctatccatgaccaggat 9228370 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228371 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 9228430 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228431 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 9228490 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228491 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 9228550 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228551 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 9228610 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228611 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 9228670 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228671 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 9228730 Query: 620 gacag 624 ||||| Sbjct: 9228731 gacag 9228735 Score = 1152 bits (581), Expect = 0.0 Identities = 601/605 (99%), Gaps = 2/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164721 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 9164779 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164780 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 9164839 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164840 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 9164899 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 9164900 catagggcgattgtcactgcttatggacccgaac-taggtgatctatccatgaccaggat 9164958 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164959 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 9165018 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165019 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 9165078 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165079 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 9165138 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165139 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 9165198 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165199 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 9165258 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165259 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 9165318 Query: 620 gacag 624 ||||| Sbjct: 9165319 gacag 9165323 Score = 111 bits (56), Expect = 3e-21 Identities = 62/64 (96%) Strand = Plus / Minus Query: 30 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 89 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 25171470 aacccccagtgggtagtgaaatagaacatgaaaccgtgctgagctcccaagcagtggtag 25171411 Query: 90 ggga 93 |||| Sbjct: 25171410 ggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938617 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 19938675 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938676 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 19938735 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938736 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 19938795 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938796 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 19938855 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938856 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 19938915 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938916 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 19938975 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938976 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 19939035 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939036 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 19939095 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939096 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 19939155 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939156 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 19939215 Query: 620 gacag 624 ||||| Sbjct: 19939216 gacag 19939220 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276814 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 10276756 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276755 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 10276696 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276695 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 10276636 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276635 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 10276576 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276575 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 10276516 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276515 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 10276456 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276455 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 10276396 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276395 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 10276336 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276335 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 10276276 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276275 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 10276216 Query: 620 gacag 624 ||||| Sbjct: 10276215 gacag 10276211 Score = 1172 bits (591), Expect = 0.0 Identities = 594/595 (99%) Strand = Plus / Plus Query: 30 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387493 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 10387552 Query: 90 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387553 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 10387612 Query: 150 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 209 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10387613 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcga 10387672 Query: 210 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387673 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 10387732 Query: 270 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387733 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 10387792 Query: 330 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387793 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 10387852 Query: 390 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387853 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 10387912 Query: 450 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387913 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 10387972 Query: 510 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387973 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 10388032 Query: 570 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388033 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 10388087 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 448 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 507 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 508 tcggccagtgagacgatgggggataagcttcatcgtcgagag 549 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598799 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 31598857 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598858 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 31598917 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598918 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 31598977 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598978 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 31599037 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599038 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 31599097 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599098 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 31599157 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599158 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 31599217 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599218 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 31599277 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599278 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 31599337 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599338 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 31599397 Query: 620 gacag 624 ||||| Sbjct: 31599398 gacag 31599402 Score = 202 bits (102), Expect = 1e-48 Identities = 102/102 (100%) Strand = Plus / Minus Query: 523 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 583 aatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacag 11509979 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 539 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 598 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 599 taaaggaggtggggg 613 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 542 gtcgagagggaaacagcccggatcaccagctaaggccc 579 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 441 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 495 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526115 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 33526173 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526174 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 33526233 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526234 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 33526293 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526294 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 33526353 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526354 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 33526413 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526414 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 33526473 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526474 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 33526533 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526534 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 33526593 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526594 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 33526653 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526654 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 33526713 Query: 620 gacag 624 ||||| Sbjct: 33526714 gacag 33526718 Score = 295 bits (149), Expect = 9e-77 Identities = 162/165 (98%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 16678089 ggtgaaaag-aacccccagtgggtaatgaaatagaacgtgaaaccgtgctgagctcccaa 16678031 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678030 ccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 16677971 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgta 184 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677970 ataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 180 bits (91), Expect = 4e-42 Identities = 100/103 (97%) Strand = Plus / Minus Query: 30 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 89 |||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 32744765 aacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagcagtgggag 32744706 Query: 90 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 132 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744705 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 165 bits (83), Expect = 2e-37 Identities = 89/91 (97%) Strand = Plus / Plus Query: 532 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 591 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 592 tcagtgataaaggaggtgggggtgcaaagac 622 ||||||||||||||||||||||||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac 527841
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47426 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 47368 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47367 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 47308 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47307 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 47248 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47247 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 47188 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47187 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 47128 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47127 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 47068 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47067 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 47008 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47007 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 46948 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46947 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 46888 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46887 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 46828 Query: 620 gacag 624 ||||| Sbjct: 46827 gacag 46823
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71312 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 71370 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71371 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 71430 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71431 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 71490 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71491 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 71550 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71551 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 71610 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71611 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 71670 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71671 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 71730 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71731 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 71790 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71791 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 71850 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71851 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 71910 Query: 620 gacag 624 ||||| Sbjct: 71911 gacag 71915
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 142 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 202 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 262 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 322 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 382 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 442 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 502 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 562 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 622 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 682 Query: 620 gacag 624 ||||| Sbjct: 683 gacag 687
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 337 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 397 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 457 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 517 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 577 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 637 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 697 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 757 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 817 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 877 Query: 620 gacag 624 ||||| Sbjct: 878 gacag 882
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 208 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 268 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 328 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 388 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 448 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 508 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 568 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 628 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 688 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 748 Query: 620 gacag 624 ||||| Sbjct: 749 gacag 753
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 339 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 399 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 459 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 519 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 579 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 639 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 699 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 759 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 819 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 879 Query: 620 gacag 624 ||||| Sbjct: 880 gacag 884
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 337 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 397 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 457 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 517 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 577 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 578 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 637 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 638 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 697 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 698 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 757 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 817 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 818 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 877 Query: 620 gacag 624 ||||| Sbjct: 878 gacag 882
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 339 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 399 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 459 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 519 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 579 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 639 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 699 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 759 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 819 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 879 Query: 620 gacag 624 ||||| Sbjct: 880 gacag 884
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949893 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 19949951 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949952 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 19950011 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950012 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 19950071 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950072 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 19950131 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950132 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 19950191 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950192 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 19950251 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950252 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 19950311 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950312 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 19950371 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950372 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 19950431 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950432 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 19950491 Query: 620 gacag 624 ||||| Sbjct: 19950492 gacag 19950496 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282853 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 10282795 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282794 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 10282735 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282734 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 10282675 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282674 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 10282615 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282614 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 10282555 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282554 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 10282495 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282494 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 10282435 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282434 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 10282375 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282374 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 10282315 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282314 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 10282255 Query: 620 gacag 624 ||||| Sbjct: 10282254 gacag 10282250 Score = 1172 bits (591), Expect = 0.0 Identities = 594/595 (99%) Strand = Plus / Plus Query: 30 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393532 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 10393591 Query: 90 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393592 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 10393651 Query: 150 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 209 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10393652 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcga 10393711 Query: 210 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393712 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 10393771 Query: 270 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393772 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 10393831 Query: 330 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393832 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 10393891 Query: 390 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393892 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 10393951 Query: 450 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393952 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 10394011 Query: 510 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394012 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 10394071 Query: 570 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394072 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 10394126 Score = 54.0 bits (27), Expect = 6e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 448 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 507 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 508 tcggccagtgagacgatgggggataagcttcatcgtcgagag 549 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119394 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 119336 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119335 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 119276 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119275 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 119216 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119215 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 119156 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119155 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 119096 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119095 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 119036 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119035 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 118976 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118975 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 118916 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118915 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 118856 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118855 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 118796 Query: 620 gacag 624 ||||| Sbjct: 118795 gacag 118791 Score = 1176 bits (593), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95645 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 95703 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95704 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 95763 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95764 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 95823 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95824 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 95883 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95884 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 95943 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95944 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 96003 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96004 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 96063 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96064 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 96123 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96124 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 96183 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96184 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 96243 Query: 620 gacag 624 ||||| Sbjct: 96244 gacag 96248
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1172 bits (591), Expect = 0.0 Identities = 594/595 (99%) Strand = Plus / Plus Query: 30 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93885 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 93944 Query: 90 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93945 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 94004 Query: 150 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 209 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 94005 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcga 94064 Query: 210 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94065 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 94124 Query: 270 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94125 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 94184 Query: 330 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94185 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 94244 Query: 390 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94245 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 94304 Query: 450 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94305 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 94364 Query: 510 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94365 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 94424 Query: 570 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94425 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 94479
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1172 bits (591), Expect = 0.0 Identities = 594/595 (99%) Strand = Plus / Plus Query: 30 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27949 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 28008 Query: 90 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28009 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 28068 Query: 150 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 209 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 28069 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcga 28128 Query: 210 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28129 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 28188 Query: 270 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28189 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 28248 Query: 330 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28249 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 28308 Query: 390 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28309 cagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 28368 Query: 450 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28369 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 28428 Query: 510 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28429 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 28488 Query: 570 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28489 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 28543
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1168 bits (589), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20707 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 20765 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20766 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 20825 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 20826 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 20885 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20886 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 20945 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20946 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 21005 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21006 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 21065 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21066 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 21125 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21126 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 21185 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21186 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 21245 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21246 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 21305 Query: 620 gacag 624 ||||| Sbjct: 21306 gacag 21310 Score = 1130 bits (570), Expect = 0.0 Identities = 599/606 (98%), Gaps = 2/606 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44411 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 44353 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44352 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 44293 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| Sbjct: 44292 ataggcagtggcttggttaagggaatggaaccctccggagccgtagtgaaagcgagtctt 44233 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44232 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 44173 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44172 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 44113 Query: 320 agttgtggttaggggtg-aaatgccactcgaacccagagctagctggttctccccgaaat 378 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 44112 agttgtggttaggggtgtaaatgccactcgaacccagagctagttggttctccccgaaat 44053 Query: 379 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44052 gcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggct 43993 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43992 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 43933 Query: 499 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 558 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43932 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 43873 Query: 559 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43872 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 43813 Query: 619 agacag 624 |||||| Sbjct: 43812 agacag 43807
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1168 bits (589), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1040 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 982 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 922 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 921 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 862 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 802 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 742 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 682 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 622 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 562 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 502 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 442 Query: 620 gacag 624 ||||| Sbjct: 441 gacag 437
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1168 bits (589), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123250 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 123192 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123191 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 123132 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123131 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 123072 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123071 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 123012 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123011 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 122952 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122951 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 122892 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122891 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 122832 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122831 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 122772 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122771 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 122712 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122711 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 122652 Query: 620 gacag 624 ||||| Sbjct: 122651 gacag 122647 Score = 1168 bits (589), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99587 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 99645 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99646 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 99705 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99706 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 99765 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99766 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 99825 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99826 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 99885 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99886 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 99945 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99946 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 100005 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100006 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 100065 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100066 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 100125 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100126 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 100185 Query: 620 gacag 624 ||||| Sbjct: 100186 gacag 100190
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1168 bits (589), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 100 ggtgaaaag-aacccccagtgggtagtgaaataggacgtgaaaccgtgctgagctcccaa 158 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 218 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 278 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 338 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 398 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 458 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 518 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 578 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 638 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 698 Query: 620 gacag 624 ||||| Sbjct: 699 gacag 703
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1168 bits (589), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123967 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 123909 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123908 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 123849 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123848 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 123789 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123788 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 123729 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123728 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 123669 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123668 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 123609 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123608 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 123549 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123548 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 123489 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123488 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 123429 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123428 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 123369 Query: 620 gacag 624 ||||| Sbjct: 123368 gacag 123364 Score = 1168 bits (589), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100264 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 100322 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100323 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 100382 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 100383 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 100442 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100443 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 100502 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100503 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 100562 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100563 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 100622 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100623 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 100682 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100683 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 100742 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100743 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 100802 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100803 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 100862 Query: 620 gacag 624 ||||| Sbjct: 100863 gacag 100867
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1160 bits (585), Expect = 0.0 Identities = 601/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241649 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 9241591 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9241590 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactc 9241531 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241530 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 9241471 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241470 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 9241411 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9241410 gaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatg 9241351 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241350 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 9241291 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241290 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 9241231 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241230 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 9241171 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241170 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 9241111 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241110 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 9241051 Query: 620 gacag 624 ||||| Sbjct: 9241050 gacag 9241046 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 413 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 472 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 473 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 532 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 533 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 578 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 567 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 613 ||||||||| || ||||||||||||| ||| ||||| |||||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtggggg 3580339 Score = 40.1 bits (20), Expect = 8.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 566 accagctaaggcccctaaatgaccgctcagtgataaagga 605 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1160 bits (585), Expect = 0.0 Identities = 601/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52862 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 52804 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 52803 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactc 52744 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52743 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 52684 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52683 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 52624 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 52623 gaagcttggatgaaactaagcagaggtccgaaccgtctgatgttgaagaatcagcggatg 52564 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52563 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 52504 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52503 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 52444 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52443 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 52384 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52383 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 52324 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52323 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 52264 Query: 620 gacag 624 ||||| Sbjct: 52263 gacag 52259
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1160 bits (585), Expect = 0.0 Identities = 601/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 336 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 396 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 456 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 516 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 gaagcttggatgaaaccaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 576 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 636 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 696 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 756 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 816 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 817 cggatcaccagctaaggcccctaaatgaccgctcagtgatagaggaggtgggggtgcaaa 876 Query: 620 gacag 624 ||||| Sbjct: 877 gacag 881
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1148 bits (579), Expect = 0.0 Identities = 592/595 (99%), Gaps = 1/595 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 391 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 449 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 450 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 509 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 510 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 569 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 570 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 629 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 689 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 749 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 809 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 869 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 929 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 614 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 930 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 984
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1144 bits (577), Expect = 0.0 Identities = 600/605 (99%), Gaps = 2/605 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123190 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 123132 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123131 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 123072 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123071 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 123012 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123011 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 122952 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122951 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 122892 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122891 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 122832 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 122831 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctg 122773 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122772 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 122713 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122712 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 122653 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 122652 cggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaa 122593 Query: 620 gacag 624 ||||| Sbjct: 122592 gacag 122588 Score = 1144 bits (577), Expect = 0.0 Identities = 600/605 (99%), Gaps = 2/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99547 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 99605 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99606 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 99665 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99666 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 99725 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99726 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 99785 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99786 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 99845 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99846 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 99905 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99906 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctg 99964 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99965 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 100024 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100025 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 100084 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 100085 cggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaa 100144 Query: 620 gacag 624 ||||| Sbjct: 100145 gacag 100149
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1144 bits (577), Expect = 0.0 Identities = 600/605 (99%), Gaps = 2/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5900 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 5958 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5959 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 6018 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6019 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 6078 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6079 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 6138 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6139 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 6198 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6199 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 6258 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 6259 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctg 6317 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6318 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 6377 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6378 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 6437 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 6438 cggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaa 6497 Query: 620 gacag 624 ||||| Sbjct: 6498 gacag 6502
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1144 bits (577), Expect = 0.0 Identities = 600/605 (99%), Gaps = 2/605 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 488 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 546 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 606 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 607 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 666 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 726 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 786 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 846 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 847 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc-ggctg 905 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 906 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 965 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 1025 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 1026 cggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtgggggtgcaaa 1085 Query: 620 gacag 624 ||||| Sbjct: 1086 gacag 1090
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1114 bits (562), Expect = 0.0 Identities = 572/574 (99%), Gaps = 1/574 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 334 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 394 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 454 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 514 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 574 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 634 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 694 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 754 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 814 Query: 560 cggatcaccagctaaggcccctaaatgaccgctc 593 |||||||||||||||||||||||||||||||||| Sbjct: 815 cggatcaccagctaaggcccctaaatgaccgctc 848
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1086 bits (548), Expect = 0.0 Identities = 594/607 (97%), Gaps = 3/607 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122732 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 122674 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 122673 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactc 122614 Query: 140 ataggcagtg--gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122613 ataggcagtgtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 122554 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122553 ttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 122494 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122493 atgaagcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcgga 122434 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122433 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 122374 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122373 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 122314 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 122313 tgcgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataata 122254 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122253 ggattcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 122194 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122193 cctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgca 122134 Query: 618 aagacag 624 ||||||| Sbjct: 122133 aagacag 122127
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1086 bits (548), Expect = 0.0 Identities = 594/607 (97%), Gaps = 3/607 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825273 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 12825215 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 12825214 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggtgactc 12825155 Query: 140 ataggcagtg--gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825154 ataggcagtgtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 12825095 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825094 ttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 12825035 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12825034 atgaagcttggatgaaactaagcagaggttcgaaccgactgatgttgaagaatcagcgga 12824975 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824974 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 12824915 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824914 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 12824855 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 12824854 tgcgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaaataata 12824795 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824794 ggattcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 12824735 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 12824734 cctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtgggggtgca 12824675 Query: 618 aagacag 624 ||||||| Sbjct: 12824674 aagacag 12824668
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1086 bits (548), Expect = 0.0 Identities = 558/560 (99%), Gaps = 1/560 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 542 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 602 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 662 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 722 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 782 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 842 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 843 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 902 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 903 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 962 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 963 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 1022 Query: 560 cggatcaccagctaaggccc 579 |||||||||||||||||||| Sbjct: 1023 cggatcaccagctaaggccc 1042
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 991 bits (500), Expect = 0.0 Identities = 503/504 (99%) Strand = Plus / Plus Query: 121 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 181 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 241 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 301 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 361 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 421 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 481 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 541 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 481 Query: 601 aaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||| Sbjct: 482 aaggaggtgggggtgcaaagacag 505
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 989 bits (499), Expect = 0.0 Identities = 502/503 (99%) Strand = Plus / Plus Query: 122 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 182 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 241 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 242 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 302 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 362 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 422 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 482 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 542 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 480 Query: 602 aggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||| Sbjct: 481 aggaggtgggggtgcaaagacag 503
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 973 bits (491), Expect = 0.0 Identities = 578/605 (95%), Gaps = 9/605 (1%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 141623 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 141568 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141567 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 141508 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141507 ataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 141453 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141452 catagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 141393 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141392 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 141333 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141332 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 141273 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 141272 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 141213 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 141212 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacagg 141153 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141152 ggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 141093 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 141092 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 141033 Query: 620 gacag 624 ||||| Sbjct: 141032 gacag 141028 Score = 973 bits (491), Expect = 0.0 Identities = 578/605 (95%), Gaps = 9/605 (1%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 112034 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 112089 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112090 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 112149 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112150 ataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 112204 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112205 catagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 112264 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 112265 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 112324 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112325 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112384 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 112385 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 112444 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112445 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaataacagg 112504 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112505 ggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 112564 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 112565 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 112624 Query: 620 gacag 624 ||||| Sbjct: 112625 gacag 112629
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 965 bits (487), Expect = 0.0 Identities = 578/605 (95%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 133738 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaa 133683 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133682 gcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 133623 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133622 ataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 133568 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133567 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 133508 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133507 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 133448 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133447 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 133388 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 133387 cgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccg 133328 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 133327 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-g 133269 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133268 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 133209 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 133208 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 133149 Query: 620 gacag 624 ||||| Sbjct: 133148 gacag 133144 Score = 965 bits (487), Expect = 0.0 Identities = 578/605 (95%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 104233 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaa 104288 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104289 gcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 104348 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104349 ataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 104403 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104404 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 104463 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104464 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 104523 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104524 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 104583 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 104584 cgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcgggccg 104643 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | Sbjct: 104644 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaatcaca-g 104702 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104703 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 104762 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 104763 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 104822 Query: 620 gacag 624 ||||| Sbjct: 104823 gacag 104827
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 955 bits (482), Expect = 0.0 Identities = 495/498 (99%), Gaps = 1/498 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 439 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 379 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 378 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 319 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 199 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 139 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 79 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 19 Query: 500 ggtcaaggtcggccagtg 517 |||||||||||||||||| Sbjct: 18 ggtcaaggtcggccagtg 1
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 948 bits (478), Expect = 0.0 Identities = 575/605 (95%), Gaps = 13/605 (2%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 127379 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 127324 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127323 gcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 127264 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 127263 ataggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtctt 127209 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127208 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 127149 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127148 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 127089 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127088 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 127029 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 127028 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 126969 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 || ||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 126968 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacagg 126913 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126912 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 126853 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 126852 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 126793 Query: 620 gacag 624 ||||| Sbjct: 126792 gacag 126788 Score = 948 bits (478), Expect = 0.0 Identities = 575/605 (95%), Gaps = 13/605 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 107543 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 107598 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107599 gcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 107658 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 107659 ataggcagtggcttggttaagggaat-----ccaccgtagccgtagcgaaagcgagtctt 107713 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107714 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 107773 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107774 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 107833 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107834 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 107893 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 107894 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 107953 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 || ||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 107954 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccca----aacagg 108009 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108010 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 108069 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 108070 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 108129 Query: 620 gacag 624 ||||| Sbjct: 108130 gacag 108134
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 944 bits (476), Expect = 0.0 Identities = 578/610 (94%), Gaps = 14/610 (2%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 139101 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 139046 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139045 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 138986 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 138985 ataggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtctt 138931 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138930 catagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 138871 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 138870 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 138811 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138810 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 138751 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 138750 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 138691 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaata 494 || ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138690 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaata 138631 Query: 495 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138630 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 138571 Query: 555 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 138570 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 138511 Query: 615 gcaaagacag 624 ||| |||||| Sbjct: 138510 gcagagacag 138501 Score = 944 bits (476), Expect = 0.0 Identities = 578/610 (94%), Gaps = 14/610 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 110844 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 110899 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110900 gcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 110959 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 110960 ataggcagtggcttggttaagggaac-----ccaccggagccatagcgaaagcgagtctt 111014 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111015 catagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 111074 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 111075 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 111134 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111135 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 111194 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 111195 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 111254 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc-----aaaaata 494 || ||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111255 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaaacaaaata 111314 Query: 495 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111315 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 111374 Query: 555 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 111375 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 111434 Query: 615 gcaaagacag 624 ||| |||||| Sbjct: 111435 gcagagacag 111444
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 136454 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 136399 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 136398 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 136341 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 136340 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 136286 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136285 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 136226 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136225 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 136166 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136165 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 136106 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136105 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 136046 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 136045 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 135986 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135985 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 135926 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135925 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 135866 Query: 618 aagacag 624 |||||| Sbjct: 135865 gagacag 135859 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 107103 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 107158 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 107159 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 107216 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107217 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 107271 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107272 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 107331 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107332 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 107391 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107392 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 107451 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107452 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 107511 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107512 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 107571 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107572 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 107631 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107632 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 107691 Query: 618 aagacag 624 |||||| Sbjct: 107692 gagacag 107698
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 135062 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 135007 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 135006 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 134949 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134948 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 134894 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134893 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 134834 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134833 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 134774 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134773 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 134714 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134713 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 134654 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134653 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 134594 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134593 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 134534 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134533 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134474 Query: 618 aagacag 624 |||||| Sbjct: 134473 gagacag 134467 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 105974 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 106029 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 106030 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 106087 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106088 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 106142 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106143 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 106202 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106203 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 106262 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106263 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 106322 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106323 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 106382 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106383 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 106442 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106443 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 106502 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106503 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106562 Query: 618 aagacag 624 |||||| Sbjct: 106563 gagacag 106569
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 136108 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 136053 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 136052 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 135995 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135994 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 135940 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135939 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 135880 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135879 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 135820 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135819 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 135760 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135759 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 135700 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135699 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 135640 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135639 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 135580 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135579 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 135520 Query: 618 aagacag 624 |||||| Sbjct: 135519 gagacag 135513 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 106317 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 106372 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 106373 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 106430 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106431 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 106485 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106486 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 106545 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106546 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 106605 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106606 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 106665 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106666 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 106725 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106726 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 106785 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106786 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 106845 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106846 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106905 Query: 618 aagacag 624 |||||| Sbjct: 106906 gagacag 106912
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 135197 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 135142 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 135141 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 135084 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135083 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 135029 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135028 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 134969 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134968 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 134909 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134908 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 134849 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134848 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 134789 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134788 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 134729 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134728 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 134669 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134668 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134609 Query: 618 aagacag 624 |||||| Sbjct: 134608 gagacag 134602 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 106146 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 106201 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 106202 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 106259 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106260 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 106314 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106315 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 106374 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106375 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 106434 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106435 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 106494 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106495 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 106554 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106555 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 106614 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106615 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 106674 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106675 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106734 Query: 618 aagacag 624 |||||| Sbjct: 106735 gagacag 106741
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 135195 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 135140 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 135139 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 135082 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135081 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 135027 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135026 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 134967 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134966 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 134907 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134906 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 134847 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134846 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 134787 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134786 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 134727 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134726 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 134667 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134666 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134607 Query: 618 aagacag 624 |||||| Sbjct: 134606 gagacag 134600 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 106143 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 106198 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 106199 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 106256 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106257 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 106311 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106312 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 106371 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106372 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 106431 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106432 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 106491 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106492 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 106551 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106552 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 106611 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106612 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 106671 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106672 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106731 Query: 618 aagacag 624 |||||| Sbjct: 106732 gagacag 106738
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 135107 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 135052 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 135051 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 134994 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134993 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 134939 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134938 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 134879 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134878 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 134819 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134818 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 134759 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134758 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 134699 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134698 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 134639 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134638 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 134579 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134578 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134519 Query: 618 aagacag 624 |||||| Sbjct: 134518 gagacag 134512 Score = 932 bits (470), Expect = 0.0 Identities = 575/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 106021 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 106076 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 106077 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 106134 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106135 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 106189 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106190 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 106249 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106250 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 106309 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106310 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 106369 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106370 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 106429 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106430 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 106489 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106490 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 106549 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106550 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106609 Query: 618 aagacag 624 |||||| Sbjct: 106610 gagacag 106616
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 930 bits (469), Expect = 0.0 Identities = 575/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 131184 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 131129 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| Sbjct: 131128 aagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 131070 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131069 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 131015 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131014 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 130955 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 130954 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 130895 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130894 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 130835 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130834 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 130775 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 130774 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 130715 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130714 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 130655 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 130654 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 130595 Query: 618 aagacag 624 |||||| Sbjct: 130594 gagacag 130588 Score = 930 bits (469), Expect = 0.0 Identities = 575/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 103451 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 103506 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| Sbjct: 103507 aagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 103565 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103566 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 103620 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103621 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 103680 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 103681 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 103740 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103741 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 103800 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103801 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 103860 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 103861 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 103920 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103921 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 103980 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 103981 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 104040 Query: 618 aagacag 624 |||||| Sbjct: 104041 gagacag 104047
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 930 bits (469), Expect = 0.0 Identities = 575/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 484 agggtgaaaag-aacccccaccggggagtgaaatagaacatgaaaccgta---agctccc 539 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| Sbjct: 540 aagcagtgggaggagcctgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 598 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 599 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 653 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 713 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 714 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 773 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 833 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 893 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 894 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 953 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 1013 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1014 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 1073 Query: 618 aagacag 624 |||||| Sbjct: 1074 gagacag 1080
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 924 bits (466), Expect = 0.0 Identities = 574/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 135816 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 135761 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 135760 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 135703 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135702 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 135648 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135647 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 135588 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135587 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 135528 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135527 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 135468 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135467 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 135408 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135407 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 135348 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135347 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 135288 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 135287 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 135228 Query: 618 aagacag 624 |||||| Sbjct: 135227 gagacag 135221 Score = 924 bits (466), Expect = 0.0 Identities = 574/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 106814 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 106869 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 106870 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 106927 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106928 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 106982 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106983 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 107042 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107043 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 107102 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107103 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 107162 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107163 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 107222 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107223 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 107282 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107283 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 107342 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 107343 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 107402 Query: 618 aagacag 624 |||||| Sbjct: 107403 gagacag 107409
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 924 bits (466), Expect = 0.0 Identities = 574/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| |||||| Sbjct: 142395 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgtag---gctccc 142340 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 142339 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 142282 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 142281 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 142227 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142226 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 142167 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 142166 atgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaatcagcgga 142107 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 142106 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctccccgaaa 142047 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142046 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 141987 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 141986 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 141927 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 141926 ggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagagggaaacag 141867 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 141866 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 141807 Query: 618 aagacag 624 ||||||| Sbjct: 141806 aagacag 141800 Score = 924 bits (466), Expect = 0.0 Identities = 574/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| |||||| Sbjct: 110933 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgtag---gctccc 110988 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 110989 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 111046 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 111047 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 111101 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111102 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 111161 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111162 atgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaatcagcgga 111221 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 111222 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctccccgaaa 111281 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111282 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 111341 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 111342 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 111401 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 111402 ggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagagggaaacag 111461 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 111462 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 111521 Query: 618 aagacag 624 ||||||| Sbjct: 111522 aagacag 111528
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 924 bits (466), Expect = 0.0 Identities = 574/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 2008 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 2063 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 2064 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 2121 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2122 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 2176 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2177 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 2236 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2237 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 2296 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2297 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 2356 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2357 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 2416 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2417 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 2476 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2477 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 2536 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 2537 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 2596 Query: 618 aagacag 624 |||||| Sbjct: 2597 gagacag 2603
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 924 bits (466), Expect = 0.0 Identities = 574/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 135814 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 135759 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 135758 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 135701 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135700 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 135646 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135645 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 135586 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135585 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 135526 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135525 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 135466 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135465 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 135406 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135405 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 135346 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135345 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 135286 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 135285 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 135226 Query: 618 aagacag 624 |||||| Sbjct: 135225 gagacag 135219 Score = 924 bits (466), Expect = 0.0 Identities = 574/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 106812 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 106867 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 106868 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 106925 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106926 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 106980 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106981 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 107040 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107041 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 107100 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107101 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 107160 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107161 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 107220 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107221 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 107280 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107281 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 107340 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 107341 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 107400 Query: 618 aagacag 624 |||||| Sbjct: 107401 gagacag 107407
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 924 bits (466), Expect = 0.0 Identities = 574/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 135545 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 135490 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 135489 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 135432 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135431 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 135377 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135376 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 135317 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135316 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 135257 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135256 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 135197 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135196 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 135137 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135136 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 135077 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135076 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 135017 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 135016 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 134957 Query: 618 aagacag 624 |||||| Sbjct: 134956 gagacag 134950 Score = 924 bits (466), Expect = 0.0 Identities = 574/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 106593 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 106648 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 106649 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 106706 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106707 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 106761 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106762 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 106821 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106822 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 106881 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106882 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 106941 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106942 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 107001 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107002 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 107061 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107062 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 107121 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 107122 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 107181 Query: 618 aagacag 624 |||||| Sbjct: 107182 gagacag 107188
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 922 bits (465), Expect = 0.0 Identities = 574/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 132292 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 132237 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| Sbjct: 132236 aagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 132178 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132177 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 132123 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132122 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 132063 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132062 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 132003 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132002 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 131943 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131942 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 131883 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131882 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 131823 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131822 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 131763 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 131762 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 131703 Query: 618 aagacag 624 |||||| Sbjct: 131702 gagacag 131696 Score = 922 bits (465), Expect = 0.0 Identities = 574/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 104586 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 104641 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| Sbjct: 104642 aagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 104700 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104701 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 104755 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104756 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 104815 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104816 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 104875 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104876 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 104935 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104936 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 104995 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104996 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 105055 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105056 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 105115 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 105116 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 105175 Query: 618 aagacag 624 |||||| Sbjct: 105176 gagacag 105182
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 922 bits (465), Expect = 0.0 Identities = 574/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||| | Sbjct: 131308 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctctc 131253 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 131252 aagcagtgggagggggaccagacc-ctgaccgcgtgcctgttgaagaatgagccggcgac 131194 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 131193 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 131139 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131138 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 131079 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 131078 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 131019 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131018 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 130959 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130958 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 130899 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 130898 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataaca 130839 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130838 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 130779 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 130778 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 130719 Query: 618 aagacag 624 |||||| Sbjct: 130718 gagacag 130712 Score = 922 bits (465), Expect = 0.0 Identities = 574/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||| | Sbjct: 102137 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctctc 102192 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||||| | || | ||||||||||||||||||||||||||||||||||| Sbjct: 102193 aagcagtgggagggggaccagacc-ctgaccgcgtgcctgttgaagaatgagccggcgac 102251 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 102252 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 102306 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102307 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 102366 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 102367 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 102426 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102427 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 102486 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102487 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 102546 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 102547 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataaca 102606 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102607 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 102666 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 102667 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 102726 Query: 618 aagacag 624 |||||| Sbjct: 102727 gagacag 102733
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 922 bits (465), Expect = 0.0 Identities = 574/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 132285 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 132230 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| Sbjct: 132229 aagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 132171 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132170 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 132116 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132115 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 132056 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 132055 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 131996 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131995 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 131936 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131935 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 131876 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131875 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 131816 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131815 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 131756 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 131755 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 131696 Query: 618 aagacag 624 |||||| Sbjct: 131695 gagacag 131689 Score = 922 bits (465), Expect = 0.0 Identities = 574/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 104584 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 104639 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| Sbjct: 104640 aagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 104698 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104699 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 104753 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104754 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 104813 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104814 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 104873 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104874 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 104933 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104934 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 104993 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104994 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 105053 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105054 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 105113 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct: 105114 cccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgca 105173 Query: 618 aagacag 624 |||||| Sbjct: 105174 gagacag 105180
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 916 bits (462), Expect = 0.0 Identities = 573/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 135074 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 135019 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 135018 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 134961 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134960 taataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 134906 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134905 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 134846 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 134845 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 134786 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134785 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 134726 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134725 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 134666 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 134665 cgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataaca 134606 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134605 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 134546 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134545 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134486 Query: 618 aagacag 624 |||||| Sbjct: 134485 gagacag 134479 Score = 916 bits (462), Expect = 0.0 Identities = 573/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 105988 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 106043 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 106044 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 106101 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106102 taataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 106156 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106157 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 106216 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106217 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 106276 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106277 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 106336 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106337 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 106396 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 106397 cgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaaataaca 106456 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106457 ggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaacag 106516 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 106517 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 106576 Query: 618 aagacag 624 |||||| Sbjct: 106577 gagacag 106583
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 914 bits (461), Expect = 0.0 Identities = 573/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| |||| || Sbjct: 135418 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agcttcc 135363 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| || || ||||||||||||||||||||||||||||||||||||| Sbjct: 135362 aagcagtgggaggagacgagga-ctctgaccgcgtgcctgttgaagaatgagccggcgac 135304 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135303 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 135249 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135248 ttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 135189 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135188 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 135129 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135128 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 135069 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135068 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 135009 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 135008 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataaca 134949 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134948 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 134889 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 134888 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 134829 Query: 618 aagacag 624 |||||| Sbjct: 134828 gagacag 134822 Score = 914 bits (461), Expect = 0.0 Identities = 573/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| |||| || Sbjct: 106488 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agcttcc 106543 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| || || ||||||||||||||||||||||||||||||||||||| Sbjct: 106544 aagcagtgggaggagacgagga-ctctgaccgcgtgcctgttgaagaatgagccggcgac 106602 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106603 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 106657 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106658 ttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 106717 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106718 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 106777 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106778 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 106837 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106838 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 106897 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 106898 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataaca 106957 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106958 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 107017 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107018 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 107077 Query: 618 aagacag 624 |||||| Sbjct: 107078 gagacag 107084
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 914 bits (461), Expect = 0.0 Identities = 573/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| |||| || Sbjct: 135697 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agcttcc 135642 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| || || ||||||||||||||||||||||||||||||||||||| Sbjct: 135641 aagcagtgggaggagacgagga-ctctgaccgcgtgcctgttgaagaatgagccggcgac 135583 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135582 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 135528 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135527 ttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 135468 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135467 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 135408 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135407 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 135348 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135347 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 135288 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 135287 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataaca 135228 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135227 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 135168 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135167 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 135108 Query: 618 aagacag 624 |||||| Sbjct: 135107 gagacag 135101 Score = 914 bits (461), Expect = 0.0 Identities = 573/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| |||| || Sbjct: 106710 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agcttcc 106765 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| || || ||||||||||||||||||||||||||||||||||||| Sbjct: 106766 aagcagtgggaggagacgagga-ctctgaccgcgtgcctgttgaagaatgagccggcgac 106824 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106825 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 106879 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || || |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106880 ttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 106939 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106940 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 106999 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107000 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 107059 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107060 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 107119 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct: 107120 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaaataaca 107179 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107180 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 107239 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 107240 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 107299 Query: 618 aagacag 624 |||||| Sbjct: 107300 gagacag 107306
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 912 bits (460), Expect = 0.0 Identities = 574/609 (94%), Gaps = 11/609 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 139229 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 139174 Query: 78 aagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 135 ||||||||||||| || | | ||||||||||||||||||||||||||||||||||| Sbjct: 139173 aagcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcg 139114 Query: 136 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 195 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 139113 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 139059 Query: 196 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 255 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139058 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 138999 Query: 256 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 315 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138998 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 138939 Query: 316 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138938 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 138879 Query: 376 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138878 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 138819 Query: 436 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 495 || ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138818 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataa 138759 Query: 496 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaac 555 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138758 taggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaac 138699 Query: 556 agcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtg 615 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138698 agcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtg 138639 Query: 616 caaagacag 624 || |||||| Sbjct: 138638 cagagacag 138630 Score = 912 bits (460), Expect = 0.0 Identities = 574/609 (94%), Gaps = 11/609 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 110070 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 110125 Query: 78 aagcagtgggagggga--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 135 ||||||||||||| || | | ||||||||||||||||||||||||||||||||||| Sbjct: 110126 aagcagtgggaggagactactaggactctgaccgcgtgcctgttgaagaatgagccggcg 110185 Query: 136 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 195 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 110186 actcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgag 110240 Query: 196 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 255 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110241 tcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacca 110300 Query: 256 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 315 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110301 ggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcg 110360 Query: 316 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110361 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 110420 Query: 376 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110421 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 110480 Query: 436 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 495 || ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110481 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataa 110540 Query: 496 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaac 555 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110541 taggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaac 110600 Query: 556 agcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtg 615 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110601 agcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtg 110660 Query: 616 caaagacag 624 || |||||| Sbjct: 110661 cagagacag 110669
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 910 bits (459), Expect = 0.0 Identities = 574/608 (94%), Gaps = 12/608 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| ||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 139021 agggtgaaaag-aacccccgtcggggagtgaaatagaacatgaaaccgta---agctccc 138966 Query: 78 aagcagtgggaggggaa-agtgatctctgaccgcgtgcctgttgaagaatgagccggcga 136 ||||||||||||| | || | |||||||||||||||||||||||||||||||||||| Sbjct: 138965 aagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcga 138908 Query: 137 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 196 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 138907 ctcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagt 138853 Query: 197 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 256 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138852 cttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 138793 Query: 257 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 316 |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 138792 gatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgg 138733 Query: 317 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138732 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 138673 Query: 377 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138672 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 138613 Query: 437 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 496 | ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138612 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataac 138553 Query: 497 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138552 aggggtcgaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 138493 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 616 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 138492 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgc 138433 Query: 617 aaagacag 624 | |||||| Sbjct: 138432 agagacag 138425 Score = 910 bits (459), Expect = 0.0 Identities = 574/608 (94%), Gaps = 12/608 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| ||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 110076 agggtgaaaag-aacccccgtcggggagtgaaatagaacatgaaaccgta---agctccc 110131 Query: 78 aagcagtgggaggggaa-agtgatctctgaccgcgtgcctgttgaagaatgagccggcga 136 ||||||||||||| | || | |||||||||||||||||||||||||||||||||||| Sbjct: 110132 aagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcga 110189 Query: 137 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 196 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 110190 ctcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagt 110244 Query: 197 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 256 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110245 cttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 110304 Query: 257 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 316 |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 110305 gatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgg 110364 Query: 317 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110365 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 110424 Query: 377 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110425 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 110484 Query: 437 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 496 | ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110485 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataac 110544 Query: 497 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110545 aggggtcgaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 110604 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 616 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 110605 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgc 110664 Query: 617 aaagacag 624 | |||||| Sbjct: 110665 agagacag 110672
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 904 bits (456), Expect = 0.0 Identities = 569/605 (94%), Gaps = 20/605 (3%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 134496 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 134441 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134440 gcagtgggaggagaaa----tctctgaccgcgtgcctgttgaagaatgagccggcgactc 134385 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134384 ataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 134330 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134329 catagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 134270 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134269 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 134210 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134209 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 134150 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 134149 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 134090 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 || |||||||||||||||||||||||||||||||||||||||||| || ||| | Sbjct: 134089 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------g 134037 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134036 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 133977 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 133976 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 133917 Query: 620 gacag 624 ||||| Sbjct: 133916 gacag 133912 Score = 904 bits (456), Expect = 0.0 Identities = 569/605 (94%), Gaps = 20/605 (3%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| |||||||||| ||||||||| Sbjct: 105786 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgtg---agctcccaa 105841 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105842 gcagtgggaggagaaa----tctctgaccgcgtgcctgttgaagaatgagccggcgactc 105897 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105898 ataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 105952 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105953 catagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 106012 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106013 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcggatg 106072 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106073 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 106132 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106133 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 106192 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 || |||||||||||||||||||||||||||||||||||||||||| || ||| | Sbjct: 106193 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa-------g 106245 Query: 500 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106246 ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcc 106305 Query: 560 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaa 619 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 106306 cggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcaga 106365 Query: 620 gacag 624 ||||| Sbjct: 106366 gacag 106370
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 900 bits (454), Expect = 0.0 Identities = 550/581 (94%), Gaps = 12/581 (2%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 103 ||||||||||||| ||||||||| |||||||||||||||||||| | | ||| Sbjct: 608 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggccaggg----ctc 660 Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 720 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 721 ac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 775 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 776 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgga 835 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 895 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 955 Query: 404 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 463 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 956 acatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 1015 Query: 464 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 523 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 1016 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 1075 Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 1135 Query: 584 atgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||| |||||||||||||||||||| |||||||| |||||| Sbjct: 1136 atgatcgctcagtgataaaggaggtaggggtgcagagacag 1176
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 898 bits (453), Expect = 0.0 Identities = 571/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 482 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 537 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || ||||||||||||||||||||||||||||||||||||| Sbjct: 538 aagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcgac 596 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 597 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 651 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 652 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccagg 711 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 712 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 771 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 831 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 891 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 892 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataact 951 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 952 ggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacag 1011 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1012 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 1071 Query: 618 aagacag 624 |||||| Sbjct: 1072 gagacag 1078
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 898 bits (453), Expect = 0.0 Identities = 571/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 132515 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 132460 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || ||||||||||||||||||||||||||||||||||||| Sbjct: 132459 aagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcgac 132401 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132400 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 132346 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 132345 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccagg 132286 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 132285 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 132226 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132225 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 132166 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132165 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 132106 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132105 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataact 132046 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 132045 ggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacag 131986 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131985 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 131926 Query: 618 aagacag 624 |||||| Sbjct: 131925 gagacag 131919 Score = 898 bits (453), Expect = 0.0 Identities = 571/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 104249 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 104304 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || ||||||||||||||||||||||||||||||||||||| Sbjct: 104305 aagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcgac 104363 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104364 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 104418 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104419 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccagg 104478 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 104479 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 104538 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104539 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 104598 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104599 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 104658 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104659 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataact 104718 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104719 ggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacag 104778 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104779 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 104838 Query: 618 aagacag 624 |||||| Sbjct: 104839 gagacag 104845
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 898 bits (453), Expect = 0.0 Identities = 572/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 131385 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 131330 Query: 78 aagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 136 ||||||||||||| || | || |||||||||||||||||||||||||||||||||||| Sbjct: 131329 aagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcga 131271 Query: 137 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 196 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 131270 ctcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgagt 131216 Query: 197 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 256 ||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131215 cttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 131156 Query: 257 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 316 |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 131155 gatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgg 131096 Query: 317 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131095 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 131036 Query: 377 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 436 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131035 atgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcggg 130976 Query: 437 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 496 | ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 130975 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataac 130916 Query: 497 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130915 aagggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 130856 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 616 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 130855 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgc 130796 Query: 617 aaagaca 623 | ||||| Sbjct: 130795 agagaca 130789 Score = 898 bits (453), Expect = 0.0 Identities = 572/607 (94%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 104009 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 104064 Query: 78 aagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 136 ||||||||||||| || | || |||||||||||||||||||||||||||||||||||| Sbjct: 104065 aagcagtgggaggaggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcga 104123 Query: 137 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 196 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 104124 ctcataggcagtggcttggttaagggaaa-----ccaccggagccgtagcgaaagcgagt 104178 Query: 197 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 256 ||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104179 cttcacagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 104238 Query: 257 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 316 |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 104239 gatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgg 104298 Query: 317 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104299 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 104358 Query: 377 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 436 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104359 atgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggtgcggg 104418 Query: 437 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 496 | ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104419 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataac 104478 Query: 497 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104479 aagggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 104538 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 616 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 104539 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgc 104598 Query: 617 aaagaca 623 | ||||| Sbjct: 104599 agagaca 104605
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 898 bits (453), Expect = 0.0 Identities = 571/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 133476 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 133421 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || ||||||||||||||||||||||||||||||||||||| Sbjct: 133420 aagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcgac 133362 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133361 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 133307 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 133306 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccagg 133247 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 133246 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 133187 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133186 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 133127 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133126 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 133067 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133066 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataact 133007 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 133006 ggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacag 132947 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132946 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 132887 Query: 618 aagacag 624 |||||| Sbjct: 132886 gagacag 132880 Score = 898 bits (453), Expect = 0.0 Identities = 571/607 (94%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 105173 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 105228 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || ||||||||||||||||||||||||||||||||||||| Sbjct: 105229 aagcagtgggaggagccc-tgggctctgaccgcgtgcctgttgaagaatgagccggcgac 105287 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105288 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 105342 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105343 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatctatgaccagg 105402 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 105403 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 105462 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105463 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 105522 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105523 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 105582 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105583 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataact 105642 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105643 ggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagggaaacag 105702 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 105703 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 105762 Query: 618 aagacag 624 |||||| Sbjct: 105763 gagacag 105769
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 892 bits (450), Expect = 0.0 Identities = 570/606 (94%), Gaps = 13/606 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||| ||| Sbjct: 982 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctctcaa 1037 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| || || ||||||||||||||||||||||||||||||||||||||| Sbjct: 1038 gcagtgggaggagacagg---ctctgaccgcgtgcctgttgaagaatgagccggcgactc 1094 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1095 ataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 1149 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1150 catagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 1209 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1210 gaagcttgggtgaaactaagtgagggtccgaaccgactgatgttgaagaatcagcggatg 1269 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1270 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 1329 Query: 380 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggctg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1330 cgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggccg 1389 Query: 440 cgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacagg 499 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1390 cgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataacagg 1449 Query: 500 ggtcaaggtcggccagtgagacgat-gggggataagcttcatcgtcgagagggaaacagc 558 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1450 ggtcaaggtcggccagtgagacgatggggggataagcttcatcgtcgagagggaaacagc 1509 Query: 559 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 618 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1510 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgcag 1569 Query: 619 agacag 624 |||||| Sbjct: 1570 agacag 1575
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 890 bits (449), Expect = 0.0 Identities = 570/607 (93%), Gaps = 10/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 491 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 546 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| Sbjct: 547 aagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 605 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 606 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 660 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 ttcgtagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 720 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 721 atggagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 780 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 840 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 900 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 901 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaataaca 960 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 961 ggggttaaggtcggccagtgagacaatgggggataagcttcatcgtcgagagggaaacag 1020 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 1021 cccggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtaggggtgca 1080 Query: 618 aagacag 624 |||||| Sbjct: 1081 cagacag 1087
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 888 bits (448), Expect = 0.0 Identities = 574/609 (94%), Gaps = 14/609 (2%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 2252 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 2307 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 2308 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 2365 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2366 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 2420 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2421 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 2480 Query: 258 atgaagcttggatgaaactaagcagagg-tccgaaccgactgatgttgaagaatcagcgg 316 ||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 2481 atgaagcttgggtgaaactaagtggagggtccgaaccgactgatgttgaagaatcagcgg 2540 Query: 317 atgagttgtggttaggggtgaaatg-ccactcgaacccagagctagctggttctccccga 375 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2541 atgagttgtggttaggggtgaaatggccactcgaacccagagctagctggttctccccga 2600 Query: 376 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2601 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 2660 Query: 436 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 495 || ||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 2661 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgactc-aaaataa 2719 Query: 496 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaac 555 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2720 caggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagggaaac 2779 Query: 556 agcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtg 615 || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2780 agtccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtg 2839 Query: 616 caaagacag 624 || |||||| Sbjct: 2840 cagagacag 2848
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 886 bits (447), Expect = 0.0 Identities = 569/607 (93%), Gaps = 12/607 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||| ||| ||||||||| ||||| | Sbjct: 491 agggtgaaaag-aacccccatcggggagtgaaataaaacatgaaaccgta---agctctc 546 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| || || |||||| ||||||||||||||| |||||||||||||| Sbjct: 547 aagcagtgggaggagacagg---ctctgaacgcgtgcctgttgaaaaatgagccggcgac 603 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 604 tcatacgcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 658 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 718 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 719 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 778 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 838 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 839 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 898 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 899 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaaataaca 958 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 959 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtccagagggaaacag 1018 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1019 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 1078 Query: 618 aagacag 624 |||||| Sbjct: 1079 gagacag 1085
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 856 bits (432), Expect = 0.0 Identities = 501/524 (95%), Gaps = 5/524 (0%) Strand = Plus / Minus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 461 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 520 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 129555 Query: 521 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 580 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129554 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 129495 Query: 581 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 129494 taaatgaccgctcagtgataaaggaggtaggggtgcagagacag 129451 Score = 856 bits (432), Expect = 0.0 Identities = 501/524 (95%), Gaps = 5/524 (0%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 461 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 520 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 102901 Query: 521 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 580 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 102902 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 102961 Query: 581 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 102962 taaatgaccgctcagtgataaaggaggtaggggtgcagagacag 103005 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/73 (87%), Gaps = 4/73 (5%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 130052 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccg---taagctccc 129997 Query: 78 aagcagtgggagg 90 ||||||||||||| Sbjct: 129996 aagcagtgggagg 129984 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/73 (87%), Gaps = 4/73 (5%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 102404 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccg---taagctccc 102459 Query: 78 aagcagtgggagg 90 ||||||||||||| Sbjct: 102460 aagcagtgggagg 102472
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 854 bits (431), Expect = 0.0 Identities = 565/607 (93%), Gaps = 17/607 (2%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| || |||| Sbjct: 139877 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agttccc 139822 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| || | | ||||||||||||||||||||||||||||||||||||| Sbjct: 139821 aagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 139763 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 139762 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 139708 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139707 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 139648 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 139647 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 139588 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139587 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 139528 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139527 tgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggc 139468 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||| || || |||| Sbjct: 139467 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa----- 139413 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139412 --ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 139355 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139354 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 139295 Query: 618 aagacag 624 |||||| Sbjct: 139294 gagacag 139288 Score = 854 bits (431), Expect = 0.0 Identities = 565/607 (93%), Gaps = 17/607 (2%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| || |||| Sbjct: 110183 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agttccc 110238 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| || | | ||||||||||||||||||||||||||||||||||||| Sbjct: 110239 aagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 110297 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110298 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 110352 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110353 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 110412 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110413 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 110472 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110473 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 110532 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110533 tgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggc 110592 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca 497 ||| |||||||||||||||||||||||||||||||||||||| || || |||| Sbjct: 110593 cgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaaa----- 110647 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110648 --ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 110705 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110706 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggtgca 110765 Query: 618 aagacag 624 |||||| Sbjct: 110766 gagacag 110772
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 841 bits (424), Expect = 0.0 Identities = 567/609 (93%), Gaps = 13/609 (2%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| |||| ||||||||||||| ||||||||| ||||||| Sbjct: 52202 agggtgaaaag-aacccccattggggagtgaaatagaacatgaaaccgta---agctccc 52147 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 52146 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 52089 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 52088 tcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaagcgagta 52034 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52033 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 51974 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 51973 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 51914 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51913 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 51854 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 51853 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggc 51794 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataac 496 | | ||||||||||||||||| |||||||||||||||||| |||||||| | |||||| Sbjct: 51793 cgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataat 51734 Query: 497 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51733 aggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 51674 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtg 615 ||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||| Sbjct: 51673 gcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtg 51614 Query: 616 caaagacag 624 || |||||| Sbjct: 51613 cagagacag 51605 Score = 841 bits (424), Expect = 0.0 Identities = 567/609 (93%), Gaps = 13/609 (2%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| |||| ||||||||||||| ||||||||| ||||||| Sbjct: 37626 agggtgaaaag-aacccccattggggagtgaaatagaacatgaaaccgta---agctccc 37681 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 37682 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 37739 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 37740 tcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaagcgagta 37794 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37795 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 37854 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 37855 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 37914 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37915 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 37974 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 37975 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggc 38034 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataac 496 | | ||||||||||||||||| |||||||||||||||||| |||||||| | |||||| Sbjct: 38035 cgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataat 38094 Query: 497 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38095 aggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 38154 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtg 615 ||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||| Sbjct: 38155 gcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtg 38214 Query: 616 caaagacag 624 || |||||| Sbjct: 38215 cagagacag 38223
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 841 bits (424), Expect = 0.0 Identities = 567/609 (93%), Gaps = 13/609 (2%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| |||| ||||||||||||| ||||||||| ||||||| Sbjct: 4554 agggtgaaaag-aacccccattggggagtgaaatagaacatgaaaccgta---agctccc 4609 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 4610 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 4667 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 4668 tcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaagcgagta 4722 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4723 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 4782 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4783 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 4842 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4843 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 4902 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4903 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggc 4962 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataac 496 | | ||||||||||||||||| |||||||||||||||||| |||||||| | |||||| Sbjct: 4963 cgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctacaaataat 5022 Query: 497 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5023 aggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 5082 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg-tgggggtg 615 ||||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||| Sbjct: 5083 gcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggttaggggtg 5142 Query: 616 caaagacag 624 || |||||| Sbjct: 5143 cagagacag 5151
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 839 bits (423), Expect = 0.0 Identities = 500/524 (95%), Gaps = 5/524 (0%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 461 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 520 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 995 Query: 521 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1055 Query: 581 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1056 taaatgaccgctcagtgataaaggaggtaggggtgcagagacag 1099 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/73 (86%), Gaps = 4/73 (5%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| || ||||||||||||| ||||||||| ||||||| Sbjct: 491 agggtgaaaag-aacccccatccgggagtgaaatagaacatgaaaccgta---agctccc 546 Query: 78 aagcagtgggagg 90 ||||||||||||| Sbjct: 547 aagcagtgggagg 559
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 837 bits (422), Expect = 0.0 Identities = 498/524 (95%), Gaps = 12/524 (2%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 461 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 520 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 453 Query: 521 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 513 Query: 581 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 514 taaatgaccgctcagtgataaaggaggtaggggtgcagagacag 557
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 829 bits (418), Expect = 0.0 Identities = 497/524 (94%), Gaps = 12/524 (2%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 461 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 520 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 469 Query: 521 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 529 Query: 581 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 530 taaatgaccgctcagtgataaaggaggtaggggtgcagagacag 573
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 829 bits (418), Expect = 0.0 Identities = 472/490 (96%), Gaps = 5/490 (1%) Strand = Plus / Plus Query: 135 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 194 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 195 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 254 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 255 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 314 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 315 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 375 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 435 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 494 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 495 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 554 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 555 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggt 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1007 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtaggggt 1066 Query: 615 gcaaagacag 624 |||||||||| Sbjct: 1067 gcaaagacag 1076 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/73 (86%), Gaps = 4/73 (5%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||| ||| ||||||||| ||||||| Sbjct: 491 agggtgaaaag-aacccccatcggggagtgaaataaaacatgaaaccgta---agctccc 546 Query: 78 aagcagtgggagg 90 ||||||||||||| Sbjct: 547 aagcagtgggagg 559
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 827 bits (417), Expect = 0.0 Identities = 563/608 (92%), Gaps = 13/608 (2%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| | ||||| |||| ||||||||||||| ||||||||| |||| || Sbjct: 484 agggtgaaaagaa--ccccattggggagtgaaatagaacatgaaaccgta---agctacc 538 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 539 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 596 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 597 tcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaagcgagta 651 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 ttcataggactattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 711 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 712 atgaagctttggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 771 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 831 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 832 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagtgcgggc 891 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaaaaataac 496 | | ||||||||||||||||| |||||||||||||||||| |||||||| ||||||||| Sbjct: 892 cgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctaaaaataac 951 Query: 497 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 952 aggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1011 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 616 |||| |||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| Sbjct: 1012 gcccagatcaccagctaaggcccctaattgatcgctcagtgataaaggaggtaggggtgc 1071 Query: 617 aaagacag 624 | |||||| Sbjct: 1072 agagacag 1079
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 827 bits (417), Expect = 0.0 Identities = 500/525 (95%), Gaps = 7/525 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 161 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 219 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 220 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 279 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 280 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 340 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 400 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 459 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 460 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 519 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 520 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 579 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1054 Query: 580 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1055 ctaaatgaccgctcagtgataaaggaggtaggggtgcacagacag 1099 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/73 (87%), Gaps = 4/73 (5%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| |||||||| | ||||||| Sbjct: 491 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccg---taagctccc 546 Query: 78 aagcagtgggagg 90 ||||||||||||| Sbjct: 547 aagcagtgggagg 559
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 827 bits (417), Expect = 0.0 Identities = 500/525 (95%), Gaps = 7/525 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 461 gcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgag 519 |||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| Sbjct: 177759 gcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgag 177818 Query: 520 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 579 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 177819 acgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggccc 177878 Query: 580 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 177879 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacag 177923 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 574 aggcccctaaatgaccgctcag 595 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 gtcgagagggaaacagcccggatc 565 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 gtcgagagggaaacagcccggatc 565 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 825 bits (416), Expect = 0.0 Identities = 498/524 (95%), Gaps = 6/524 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 461 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 520 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 994 Query: 521 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 580 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 995 ccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1054 Query: 581 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1055 taaatgaccgctcagtgataaaggaggtaggggtgcagagacag 1098 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/73 (86%), Gaps = 4/73 (5%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||| ||| ||||||||| ||||||| Sbjct: 491 agggtgaaaag-aacccccatcggggagtgaaataaaacatgaaaccgta---agctccc 546 Query: 78 aagcagtgggagg 90 ||||||||||||| Sbjct: 547 aagcagtgggagg 559
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 819 bits (413), Expect = 0.0 Identities = 562/607 (92%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 486 ggtgaaaag-aacccccataggggagtgaaatagaacatgaaaccgta---agctcccaa 541 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 542 gcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 601 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 602 ataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 656 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 cctagggcaattgtcactacttatggacccgaacctgggtgatctatccatgaccaggat 716 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 717 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 776 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 836 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 837 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 896 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 498 ||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 897 gcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataacag 956 Query: 499 ggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||| | |||||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 957 gggataaaggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacag 1016 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||| |||||||||||||||||||||||||||||||||||| |||||||||| || ||||| Sbjct: 1017 cccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgca 1076 Query: 618 aagacag 624 ||||||| Sbjct: 1077 aagacag 1083
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 811 bits (409), Expect = 0.0 Identities = 495/524 (94%), Gaps = 11/524 (2%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 461 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 520 |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 936 gcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgaga 989 Query: 521 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 580 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 990 cgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccc 1049 Query: 581 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1050 taaatgaccgctcagtgataaaggaggtaggggtgcaaagacag 1093 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/73 (86%), Gaps = 4/73 (5%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| || ||||||||||||| ||||||||| ||||||| Sbjct: 491 agggtgaaaag-aacccccatccgggagtgaaatagaacatgaaaccgta---agctccc 546 Query: 78 aagcagtgggagg 90 ||||||||||||| Sbjct: 547 aagcagtgggagg 559
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 807 bits (407), Expect = 0.0 Identities = 446/459 (97%) Strand = Plus / Plus Query: 166 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 225 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 226 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 285 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 286 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 346 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 406 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 465 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 466 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 525 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 526 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 586 gaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||| |||||||||||||||| |||||||| |||||| Sbjct: 1022 gaccgcccagtgataaaggaggtaggggtgcagagacag 1060
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 787 bits (397), Expect = 0.0 Identities = 558/607 (91%), Gaps = 11/607 (1%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 117663 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaa 117608 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 117607 gcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 117548 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 117547 ataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 117493 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 117492 cctagggcaattgtcactacttatggacccgaacctgggtgatctaaccatgaccaggat 117433 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 117432 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 117373 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117372 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 117313 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 117312 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 117253 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca- 497 ||| |||||||||||||||||||||||||||||||||||||||||| || |||||| | Sbjct: 117252 gcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataatag 117193 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||| | |||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 117192 ggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacag 117133 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||| ||||||||||||||||||||||||||||||| |||| |||||||||| || ||||| Sbjct: 117132 cccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgca 117073 Query: 618 aagacag 624 ||||||| Sbjct: 117072 aagacag 117066 Score = 787 bits (397), Expect = 0.0 Identities = 558/607 (91%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 90439 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaa 90494 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 90495 gcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 90554 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 90555 ataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 90609 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 90610 cctagggcaattgtcactacttatggacccgaacctgggtgatctaaccatgaccaggat 90669 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 90670 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 90729 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90730 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 90789 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 90790 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 90849 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca- 497 ||| |||||||||||||||||||||||||||||||||||||||||| || |||||| | Sbjct: 90850 gcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccccaaataatag 90909 Query: 498 ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||||| | |||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 90910 ggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaagagggaaacag 90969 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||| ||||||||||||||||||||||||||||||| |||| |||||||||| || ||||| Sbjct: 90970 cccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgca 91029 Query: 618 aagacag 624 ||||||| Sbjct: 91030 aagacag 91036
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 781 bits (394), Expect = 0.0 Identities = 557/606 (91%), Gaps = 14/606 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 86749 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaa 86804 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86805 gcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgactt 86864 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 86865 ataggcagtggcttggttaagggaac-----ccaccggagccgtagcgagagcgagtctt 86919 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86920 catggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 86979 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 86980 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 87039 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87040 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 87099 Query: 380 cgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggct 438 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 87100 cgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggcc 87159 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 498 ||| |||||||||||||||||||||||||||||||||||||| || ||| ||||| || Sbjct: 87160 gcgagagcggtaccaaatcgaggcaaactctgaatactagat-tgcccc---aataaaag 87215 Query: 499 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 558 |||| | |||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 87216 gggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagc 87275 Query: 559 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 618 || |||||||||||||||||||||||||||||||||||||| ||||| || | |||||| Sbjct: 87276 ccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaa 87335 Query: 619 agacag 624 |||||| Sbjct: 87336 agacag 87341
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 779 bits (393), Expect = 0.0 Identities = 557/607 (91%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 486 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaa 541 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 gcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 601 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||| |||||| |||||||||| || ||||||||||||||||||||||||||||| Sbjct: 602 ataggtagtggcctggttaaggggac-----ccaccggagccgtagcgaaagcgagtctt 656 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 cctggggcaattgtcactacttatggacccgaacctgggtgatctatccatgaccaggat 716 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||| || |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 717 gaagctcgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 776 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 836 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 837 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 896 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 498 ||| |||||||||||||||||||||||||||||||||||||||||| | |||||| | Sbjct: 897 gcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctccgaataacgg 956 Query: 499 ggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 ||| | | |||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 957 gggataagggtcaaccagtgagacggtgggggataagcttcatcgtcgagagggaaacag 1016 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||| |||||||||||||||||||||||||||||||||||| |||||||||| || ||||| Sbjct: 1017 cccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgca 1076 Query: 618 aagacag 624 ||||||| Sbjct: 1077 aagacag 1083
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 763 bits (385), Expect = 0.0 Identities = 541/588 (92%), Gaps = 15/588 (2%) Strand = Plus / Minus Query: 44 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 103 ||||||||||||| ||||||||| ||||||||||||||||||| ||| |||| | Sbjct: 146050 agtgaaatagaacatgaaaccgtag---gctcccaagcagtgggaggagaatcggatccc 145994 Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 145993 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggga 145934 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 || ||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 145933 ac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttat 145879 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 145878 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgga 145819 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 145818 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 145759 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 403 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145758 aatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 145699 Query: 404 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 462 || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 145698 actatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggc 145639 Query: 463 aaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcggccagt 516 |||||||||||||||| ||||| |||| ||| |||||| ||| |||||| |||||| Sbjct: 145638 aaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagt 145579 Query: 517 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 576 |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 145578 gagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 145519 Query: 577 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||| | |||||||| || ||||| |||||| Sbjct: 145518 cccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacag 145471 Score = 763 bits (385), Expect = 0.0 Identities = 541/588 (92%), Gaps = 15/588 (2%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 103 ||||||||||||| ||||||||| ||||||||||||||||||| ||| |||| | Sbjct: 112412 agtgaaatagaacatgaaaccgtag---gctcccaagcagtgggaggagaatcggatccc 112468 Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 112469 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggga 112528 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 || ||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 112529 ac-----ccaccggagccgtagcgaaagcgagtcttcctagggcaattgtcactgcttat 112583 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 112584 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgga 112643 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 112644 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 112703 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 403 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112704 aatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 112763 Query: 404 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 462 || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 112764 actatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggc 112823 Query: 463 aaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcggccagt 516 |||||||||||||||| ||||| |||| ||| |||||| ||| |||||| |||||| Sbjct: 112824 aaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagt 112883 Query: 517 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 576 |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 112884 gagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaagg 112943 Query: 577 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||| | |||||||| || ||||| |||||| Sbjct: 112944 cccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacag 112991
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 757 bits (382), Expect = 0.0 Identities = 554/608 (91%), Gaps = 10/608 (1%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 127957 agggtgaaaag-aacccccataggggagtgaaatagaacatgaaaccgta---agctccc 127902 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||| Sbjct: 127901 aagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgac 127842 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 127841 tcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 127787 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || |||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 127786 ttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatccatgaccagg 127727 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| | |||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 127726 atgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 127667 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127666 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 127607 Query: 378 tgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcggg 436 ||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct: 127606 tgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcggg 127547 Query: 437 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 496 ||||| ||||||||||||||||||||||||||||||||||| |||||||| || ||| Sbjct: 127546 ctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaac 127487 Query: 497 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 ||| | |||| ||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 127486 ggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaaca 127427 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 616 |||| ||||||||||||||||||||||||||| |||||||| |||||||||| || |||| Sbjct: 127426 gcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgc 127367 Query: 617 aaagacag 624 |||||||| Sbjct: 127366 aaagacag 127359 Score = 757 bits (382), Expect = 0.0 Identities = 554/608 (91%), Gaps = 10/608 (1%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 95490 agggtgaaaag-aacccccataggggagtgaaatagaacatgaaaccgta---agctccc 95545 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||| Sbjct: 95546 aagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgac 95605 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 95606 tcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 95660 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || |||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95661 ttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatccatgaccagg 95720 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| | |||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95721 atgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcgga 95780 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95781 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 95840 Query: 378 tgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcggg 436 ||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct: 95841 tgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcggtgcggg 95900 Query: 437 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 496 ||||| ||||||||||||||||||||||||||||||||||| |||||||| || ||| Sbjct: 95901 ctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccgaagaac 95960 Query: 497 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 ||| | |||| ||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 95961 ggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagaggggaaca 96020 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 616 |||| ||||||||||||||||||||||||||| |||||||| |||||||||| || |||| Sbjct: 96021 gcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggtaggagtgc 96080 Query: 617 aaagacag 624 |||||||| Sbjct: 96081 aaagacag 96088
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 755 bits (381), Expect = 0.0 Identities = 554/606 (91%), Gaps = 13/606 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 88835 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaa 88890 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 88891 gcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagccggcgactt 88950 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 88951 ataggcagtggcttggttaagggaac-----ccaccggagccgtagcgagagcgagtctt 89005 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89006 catggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 89065 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 89066 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 89125 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89126 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 89185 Query: 380 cgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgcgggct 438 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 89186 cgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcggtacgggcc 89245 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 498 || |||||||||||||||||||||||||||||||||||||| | ||||| | || | Sbjct: 89246 acgagagcggtaccaaatcgaggcaaactctgaatactagat-taccccaata--aaagg 89302 Query: 499 gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagc 558 |||| | |||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 89303 gggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagaggggaacagc 89362 Query: 559 ccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaa 618 || |||||||||||||||||||||||||||||||||||||| ||||| || | |||||| Sbjct: 89363 ccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagtacgagtgcaa 89422 Query: 619 agacag 624 |||||| Sbjct: 89423 agacag 89428
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 749 bits (378), Expect = 0.0 Identities = 478/508 (94%), Gaps = 10/508 (1%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 103 ||||||||||||| ||||||||| |||||||||||||||||||| | || ||| Sbjct: 364690 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagccc-tgggctc 364745 Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364746 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 364805 Query: 164 acggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgctta 222 || ||||||||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 364806 ac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgctta 364860 Query: 223 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 282 ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | Sbjct: 364861 tggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagtgg 364920 Query: 283 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 342 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 364921 aggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgc 364980 Query: 343 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364981 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 365040 Query: 403 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 462 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 365041 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 365100 Query: 463 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 522 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 365101 aaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacg 365160 Query: 523 atgggggataagcttcatcgtcgagagg 550 ||||||||||||||||||||||||||| Sbjct: 365161 gtgggggataagcttcatcgtcgagagg 365188 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 545 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 604 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 605 aggtgggggtgcaaagacag 624 |||| |||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacag 129268 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 gtcgagagggaaacagcccggatc 565 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 747 bits (377), Expect = 0.0 Identities = 422/437 (96%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 461 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 520 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 47232 Query: 521 cgatgggggataagctt 537 ||||||||||||||||| Sbjct: 47233 cgatgggggataagctt 47249 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/73 (86%), Gaps = 4/73 (5%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| |||||||| | ||||| | Sbjct: 46735 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccg---taagctctc 46790 Query: 78 aagcagtgggagg 90 ||||||||||||| Sbjct: 46791 aagcagtgggagg 46803
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 745 bits (376), Expect = 0.0 Identities = 463/488 (94%), Gaps = 8/488 (1%) Strand = Plus / Plus Query: 141 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 200 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 257 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 377 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 437 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 496 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 497 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 616 |||| ||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 1029 gccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtgc 1088 Query: 617 aaagacag 624 | |||||| Sbjct: 1089 agagacag 1096
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 739 bits (373), Expect = 0.0 Identities = 552/607 (90%), Gaps = 11/607 (1%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 490 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaa 545 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 gcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 605 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 606 ataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcaagtctt 660 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 cctggggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 720 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 721 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 780 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 840 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 841 cgttgaggcgcagcagttgactagactatctaggggtaaagcactgtttcggtgcgggct 900 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacag 498 ||| |||||||||||||||||||||||||||||||||| |||| ||| | ||||| || Sbjct: 901 gcgagagcggtaccaaatcgaggcaaactctgaatactggataggactccctaataatag 960 Query: 499 -gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacag 557 | || | |||| |||||||||| ||||||||||||||||| |||||||||| ||||| Sbjct: 961 agagtaagggtcaaccagtgagacagtgggggataagcttcattgtcgagaggggaacag 1020 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||| ||||||| ||||||||||||||||||||||| |||| |||||||||| || ||||| Sbjct: 1021 cccagatcaccggctaaggcccctaaatgaccgctaagtggtaaaggaggtaggagtgca 1080 Query: 618 aagacag 624 ||||||| Sbjct: 1081 aagacag 1087
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 646 bits (326), Expect = 0.0 Identities = 429/460 (93%), Gaps = 10/460 (2%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 115725 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaa 115670 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 115669 gcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 115610 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 115609 ataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaaagcgagtctt 115555 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115554 cttagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 115495 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 115494 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 115435 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115434 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 115375 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 115374 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 115315 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactag 478 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 115314 gcgagagcggtaccaaatcgaggcaaactctgaatactag 115275 Score = 646 bits (326), Expect = 0.0 Identities = 429/460 (93%), Gaps = 10/460 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 86395 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaa 86450 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 86451 gcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 86510 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 86511 ataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaaagcgagtctt 86565 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86566 cttagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 86625 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 86626 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 86685 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86686 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 86745 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 86746 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 86805 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactag 478 ||| |||||||||||||||||||||||||||||||||||| Sbjct: 86806 gcgagagcggtaccaaatcgaggcaaactctgaatactag 86845 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 506 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 565 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 566 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacag 115128 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Plus Query: 506 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 565 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 566 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||| |||||||||| || |||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacag 86992
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 630 bits (318), Expect = e-177 Identities = 410/439 (93%), Gaps = 10/439 (2%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 103 ||||||||||||| ||||||||| |||||||||||||||||||| | | | ||| Sbjct: 4739 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagctgggg--ctc 4793 Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4794 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 4853 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 4854 aa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttat 4908 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || Sbjct: 4909 ggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtgga 4968 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 4969 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgcc 5028 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5029 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 5088 Query: 404 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 463 ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 5089 acatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggca 5148 Query: 464 aactctgaatactagatat 482 ||||||||||||||||||| Sbjct: 5149 aactctgaatactagatat 5167 Score = 194 bits (98), Expect = 2e-46 Identities = 113/118 (95%) Strand = Plus / Plus Query: 507 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 567 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacag 5299
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 630 bits (318), Expect = e-177 Identities = 410/439 (93%), Gaps = 10/439 (2%) Strand = Plus / Minus Query: 44 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 103 ||||||||||||| ||||||||| |||||||||||||||||||| | | | ||| Sbjct: 23186 agtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagctgggg--ctc 23132 Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23131 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 23072 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 23071 aa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgcttat 23017 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| || Sbjct: 23016 ggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagtgga 22957 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 22956 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatgcc 22897 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22896 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 22837 Query: 404 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 463 ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 22836 acatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggca 22777 Query: 464 aactctgaatactagatat 482 ||||||||||||||||||| Sbjct: 22776 aactctgaatactagatat 22758 Score = 194 bits (98), Expect = 2e-46 Identities = 113/118 (95%) Strand = Plus / Minus Query: 507 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 567 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacag 22626
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 624 bits (315), Expect = e-176 Identities = 349/360 (96%), Gaps = 9/360 (2%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75210 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc-- 75154 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75153 ------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 75100 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 75099 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 75040 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75039 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 74980 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74979 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 74920 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74919 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 gtcgagagggaaacagcccggatc 565 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 624 bits (315), Expect = e-176 Identities = 349/360 (96%), Gaps = 9/360 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382328 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc-- 382384 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382385 ------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 382438 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 382439 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 382498 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382499 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 382558 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382559 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 382618 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382619 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 gtcgagagggaaacagcccggatc 565 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 gtcgagagggaaacagcccggatc 565 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 624 bits (315), Expect = e-176 Identities = 349/360 (96%), Gaps = 9/360 (2%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113301 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc-- 113245 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113244 ------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 113191 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 113190 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 113131 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113130 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 113071 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113070 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 113011 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113010 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 gtcgagagggaaacagcccggatc 565 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 624 bits (315), Expect = e-176 Identities = 352/364 (96%), Gaps = 9/364 (2%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367983 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc-- 367927 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367926 ------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 367873 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 367872 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 367813 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367812 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 367753 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367752 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 367693 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367692 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatt 367633 Query: 380 cgtt 383 |||| Sbjct: 367632 cgtt 367629 Score = 624 bits (315), Expect = e-176 Identities = 352/364 (96%), Gaps = 9/364 (2%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184588 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc-- 184532 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184531 ------ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 184478 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 184477 ataggcagtggcttggttaagggaatggaacccaccggagccgtagcgaaagcgagtctt 184418 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184417 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 184358 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184357 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 184298 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184297 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatt 184238 Query: 380 cgtt 383 |||| Sbjct: 184237 cgtt 184234 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 gtcgagagggaaacagcccggatc 565 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 624 bits (315), Expect = e-176 Identities = 430/465 (92%), Gaps = 10/465 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||| ||| |||| |||| Sbjct: 4375 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaatcgta---agcttccaa 4430 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4431 gcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 4490 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 4491 ataggcagtggcctggttaagggaatt-----caccggagccgtagcgaaagcgagtctt 4545 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4546 cctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 4605 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 4606 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 4665 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4666 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 4725 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4726 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 4785 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 483 ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 4786 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 4830 Score = 172 bits (87), Expect = 9e-40 Identities = 111/119 (93%) Strand = Plus / Plus Query: 506 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 565 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 566 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacag 4976
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 624 bits (315), Expect = e-176 Identities = 538/608 (88%), Gaps = 12/608 (1%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| | Sbjct: 138782 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccga 138727 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 138726 gcagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 138667 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138666 ataggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 138612 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 138611 cccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggat 138552 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||||| ||| | | ||||||||||||||||||||||||| |||||||||||| Sbjct: 138551 gaagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatg 138492 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138491 agtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatg 138432 Query: 380 cgttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||| ||||||| || | || | |||||||||||||| ||||||||||| Sbjct: 138431 cgttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggct 138372 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca- 497 ||| |||| |||||||| |||||||||||||||||||| | |||| ||| | | | ||| Sbjct: 138371 gcgagagcagtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacac 138312 Query: 498 -ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 |||| ||||||||||||||||||| |||||||||||||||| ||||||||||| |||| Sbjct: 138311 gagggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaaca 138252 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 616 |||| |||||||||||||||||||| ||||||||||||||| | |||||||| || |||| Sbjct: 138251 gcccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgc 138192 Query: 617 aaagacag 624 |||||||| Sbjct: 138191 aaagacag 138184 Score = 624 bits (315), Expect = e-176 Identities = 538/608 (88%), Gaps = 12/608 (1%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| | Sbjct: 83095 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccga 83150 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 83151 gcagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 83210 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||| | ||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 83211 ataggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 83265 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||| | |||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 83266 cccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccatgaccaggat 83325 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||||| ||| | | ||||||||||||||||||||||||| |||||||||||| Sbjct: 83326 gaagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaatcagcggatg 83385 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 83386 agtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctccccgaaatg 83445 Query: 380 cgttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||| ||||||| || | || | |||||||||||||| ||||||||||| Sbjct: 83446 cgttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacggtgcgggct 83505 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataaca- 497 ||| |||| |||||||| |||||||||||||||||||| | |||| ||| | | | ||| Sbjct: 83506 gcgagagcagtaccaaaccgaggcaaactctgaatactgggtatggccccagagtcacac 83565 Query: 498 -ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 556 |||| ||||||||||||||||||| |||||||||||||||| ||||||||||| |||| Sbjct: 83566 gagggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgagaggggaaca 83625 Query: 557 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgc 616 |||| |||||||||||||||||||| ||||||||||||||| | |||||||| || |||| Sbjct: 83626 gcccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggtaggagtgc 83685 Query: 617 aaagacag 624 |||||||| Sbjct: 83686 aaagacag 83693
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 624 bits (315), Expect = e-176 Identities = 430/465 (92%), Gaps = 10/465 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||| ||| |||| |||| Sbjct: 485 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaatcgta---agcttccaa 540 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 600 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 601 ataggcagtggcctggttaagggaatt-----caccggagccgtagcgaaagcgagtctt 655 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 cctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 715 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 716 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 775 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 835 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 836 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 895 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 483 ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 896 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 172 bits (87), Expect = 9e-40 Identities = 111/119 (93%) Strand = Plus / Plus Query: 506 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 565 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 566 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacag 1086
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 624 bits (315), Expect = e-176 Identities = 430/465 (92%), Gaps = 10/465 (2%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||| ||| |||| |||| Sbjct: 150760 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaatcgta---agcttccaa 150705 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 150704 gcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 150645 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 150644 ataggcagtggcctggttaagggaatt-----caccggagccgtagcgaaagcgagtctt 150590 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150589 cctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 150530 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 150529 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 150470 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150469 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 150410 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 150409 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 150350 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 483 ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 150349 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 150305 Score = 624 bits (315), Expect = e-176 Identities = 430/465 (92%), Gaps = 10/465 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||| ||| |||| |||| Sbjct: 117906 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaatcgta---agcttccaa 117961 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117962 gcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 118021 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 118022 ataggcagtggcctggttaagggaatt-----caccggagccgtagcgaaagcgagtctt 118076 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118077 cctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 118136 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 118137 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 118196 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118197 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 118256 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 118257 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 118316 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 483 ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 118317 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 118361 Score = 172 bits (87), Expect = 9e-40 Identities = 111/119 (93%) Strand = Plus / Minus Query: 506 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 565 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 566 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacag 150159 Score = 172 bits (87), Expect = 9e-40 Identities = 111/119 (93%) Strand = Plus / Plus Query: 506 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 565 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 566 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacag 118507
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 624 bits (315), Expect = e-176 Identities = 430/465 (92%), Gaps = 10/465 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||| ||| |||| |||| Sbjct: 485 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaatcgta---agcttccaa 540 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 600 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct: 601 ataggcagtggcctggttaagggaatt-----caccggagccgtagcgaaagcgagtctt 655 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 cctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 715 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 716 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 775 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 835 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 836 cgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcggtgcgggct 895 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 483 ||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 896 gcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 172 bits (87), Expect = 9e-40 Identities = 111/119 (93%) Strand = Plus / Plus Query: 506 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 565 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 566 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacag 1086
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 622 bits (314), Expect = e-175 Identities = 429/463 (92%), Gaps = 7/463 (1%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| |||| |||| Sbjct: 469 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agcttccaa 524 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 gcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgactt 584 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| |||||||||||| | | ||||||||||| ||||||||||||||||| Sbjct: 585 ataggcagtggcctggttaagggaaagaa--ccaccggagccatagcgaaagcgagtctt 642 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 cccagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 702 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 703 gaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 762 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 822 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 823 cgttgaggcgcaacagttgactggactatctaggggtaaagcactgtttcggtgcgggcc 882 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactagata 481 ||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 883 gcgagagcggtaccaaatcgaggcaaactctgaatactggata 925 Score = 161 bits (81), Expect = 3e-36 Identities = 105/113 (92%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||| |||| | |||||||| ||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacag 1067
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 461 gcaaactctgaatactagatatgaccc 487 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 196 bits (99), Expect = 6e-47 Identities = 121/127 (95%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 499 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 557 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 618 aagacag 624 |||||| Sbjct: 5565 gagacag 5571
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 461 gcaaactctgaatactagatatgaccc 487 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 196 bits (99), Expect = 6e-47 Identities = 121/127 (95%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 499 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 557 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 558 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 618 aagacag 624 |||||| Sbjct: 5565 gagacag 5571
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 607 bits (306), Expect = e-170 Identities = 403/432 (93%), Gaps = 10/432 (2%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| || |||| Sbjct: 12 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agttccc 67 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| || | | ||||||||||||||||||||||||||||||||||||| Sbjct: 68 aagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 126 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 127 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 181 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 241 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 242 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 301 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 361 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 tgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggtgcgggc 421 Query: 438 tgcgcgagcggt 449 ||| ||||||| Sbjct: 422 cgcgagagcggt 433
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 597 bits (301), Expect = e-167 Identities = 472/525 (89%), Gaps = 8/525 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| ||||||||||||||||| ||||||||||||||| | ||||| | ||||||| Sbjct: 920 gcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtga 979 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 980 gaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 1039 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 |||||||||||||| ||| ||||||||||| |||||||| ||||| Sbjct: 1040 cctaaatgaccgctaagttataaaggaggtaggggtgcatagaca 1084
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 575 bits (290), Expect = e-161 Identities = 368/392 (93%), Gaps = 9/392 (2%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 103 ||||||||||||| ||||||||| || ||||||||||||||||| || | | ||| Sbjct: 33 agtgaaatagaacatgaaaccgta---agttcccaagcagtgggaggagacggggg-ctc 88 Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 148 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 || ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 149 ac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttat 203 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 204 ggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgga 263 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 323 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 403 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 324 actcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttgactgg 383 Query: 404 acatctaggggtaaagcactgtttcggtgcgg 435 |||||||||||||||||||||||||||||||| Sbjct: 384 acatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 563 bits (284), Expect = e-157 Identities = 403/438 (92%), Gaps = 6/438 (1%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 103 ||||||||||||| |||||||| | |||||||||||||||||||| ||| | |||||| Sbjct: 144428 agtgaaatagaacatgaaaccgcg---agctcccaagcagtgggaggagaatgagatctc 144484 Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 | ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 144485 taaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaagggg 144544 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | ||||| |||||||||||||||||||||||||| | |||| |||||||| |||||| Sbjct: 144545 gag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttat 144602 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 144603 aaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgga 144662 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 144663 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 144722 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 144723 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactag 144782 Query: 404 a-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 462 | |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 144783 accatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggc 144842 Query: 463 aaactctgaatactagat 480 |||||||||||||||||| Sbjct: 144843 aaactctgaatactagat 144860 Score = 563 bits (284), Expect = e-157 Identities = 403/438 (92%), Gaps = 6/438 (1%) Strand = Plus / Minus Query: 44 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 103 ||||||||||||| |||||||| | |||||||||||||||||||| ||| | |||||| Sbjct: 88423 agtgaaatagaacatgaaaccgcg---agctcccaagcagtgggaggagaatgagatctc 88367 Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 | ||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| Sbjct: 88366 taaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaagggg 88307 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | ||||| |||||||||||||||||||||||||| | |||| |||||||| |||||| Sbjct: 88306 gag-aaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttat 88249 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct: 88248 aaacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgga 88189 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 88188 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 88129 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 88128 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactag 88069 Query: 404 a-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 462 | |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 88068 accatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggc 88009 Query: 463 aaactctgaatactagat 480 |||||||||||||||||| Sbjct: 88008 aaactctgaatactagat 87991 Score = 168 bits (85), Expect = 1e-38 Identities = 106/113 (93%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||| |||||||||| || |||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacag 145011 Score = 168 bits (85), Expect = 1e-38 Identities = 106/113 (93%) Strand = Plus / Minus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||| |||||||||| || |||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacag 87840
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 539 bits (272), Expect = e-150 Identities = 403/442 (91%), Gaps = 11/442 (2%) Strand = Plus / Minus Query: 44 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 103 ||||||||||||| ||||||||| ||| ||||||||||||||| ||| | ||||| Sbjct: 6039 agtgaaatagaacatgaaaccgta---agcctccaagcagtgggaggagaatggaatctc 5983 Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 5982 tgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggttaagggc 5923 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt-a 222 || |||||||||||||||||| |||||||||| ||||||| ||||||||||||| | Sbjct: 5922 ac-----ccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactgcttta 5868 Query: 223 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 282 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 5867 tggacccgaacctgggtgatctatccatgaccaggatgaagct-ggatgaaactaagtag 5809 Query: 283 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 342 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 5808 aggtccgaaccgactgatgttgcaaaatcagcggatgagttgtggttaggggtgaaatgc 5749 Query: 343 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5748 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 5689 Query: 403 ga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 461 || | ||||||||||||||||||||||||| ||| | | |||||||| | ||||||| Sbjct: 5688 gaccgtctaggggtaaagcactgtttcggtataggccgtgtaagcggtacgacatcgagg 5629 Query: 462 caaactctgaatactagatatg 483 |||||| ||||||||||||||| Sbjct: 5628 caaactatgaatactagatatg 5607 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 506 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 565 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 566 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||| |||||||||||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacag 5484
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 515 bits (260), Expect = e-143 Identities = 344/369 (93%), Gaps = 11/369 (2%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 458 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 513 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 514 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 571 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 572 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 626 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 686 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 687 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 746 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 806 Query: 378 tgcgttgag 386 ||||||||| Sbjct: 807 tgcgttgag 815
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 509 bits (257), Expect = e-141 Identities = 413/460 (89%), Gaps = 10/460 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||| |||| Sbjct: 485 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agcctccaa 540 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 600 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| ||||||||| | ||| || |||||||||||||||||||||||| Sbjct: 601 ataggcagtggcctggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtctt 655 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||| | Sbjct: 656 tctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccagggt 715 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 716 gaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 775 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 || ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 776 agctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatg 835 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 836 cgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggct 895 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactag 478 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 896 gcgaaagcggtaccaaatcgaggcaaactctgaatactag 935 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Plus Query: 506 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 565 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 566 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacag 1064
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 509 bits (257), Expect = e-141 Identities = 413/460 (89%), Gaps = 10/460 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||| |||| Sbjct: 498 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agcctccaa 553 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 554 gcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 613 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| ||||||||| | ||| || |||||||||||||||||||||||| Sbjct: 614 ataggcagtggcctggttaaggcga--gaagcc---ggagccgtagcgaaagcgagtctt 668 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||| | Sbjct: 669 tctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccagggt 728 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 729 gaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 788 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 || ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 789 agctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatg 848 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 849 cgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggct 908 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactag 478 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 909 gcgaaagcggtaccaaatcgaggcaaactctgaatactag 948 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Plus Query: 506 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 565 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 566 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacag 1077
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 505 bits (255), Expect = e-140 Identities = 414/461 (89%), Gaps = 12/461 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||| |||| Sbjct: 602 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agcctccaa 657 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 658 gcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 717 Query: 140 ataggcagtggcttggttaagggaacg-gaacccaccggagccgtagcgaaagcgagtct 198 |||||||||||| ||||||||| || ||| || ||||||||||||||||||||||| Sbjct: 718 ataggcagtggcctggttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtct 771 Query: 199 taatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagga 258 | |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||| Sbjct: 772 ttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggccaggg 831 Query: 259 tgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggat 318 |||||||||| |||| | ||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 832 tgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggat 891 Query: 319 gagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaat 378 ||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 892 gagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaat 951 Query: 379 gcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggc 437 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 952 gcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcgggc 1011 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactag 478 |||| ||||||||||||||||||||||||||||||||||| Sbjct: 1012 tgcgaaagcggtaccaaatcgaggcaaactctgaatactag 1052 Score = 157 bits (79), Expect = 5e-35 Identities = 109/119 (91%) Strand = Plus / Plus Query: 506 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 565 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 566 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacag 1181
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 488 bits (246), Expect = e-134 Identities = 410/460 (89%), Gaps = 11/460 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||| ||| |||| ||| Sbjct: 487 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaatcgta---agctttcaa 542 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 543 gcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 602 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 603 ataggcagtggcgtggttaagggaatt-----caccggagccgtagcgaaagcgagtct- 656 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 657 aacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggccaggat 716 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||||| ||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 717 gaagcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 776 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 || ||||||||| |||||||| ||| |||||| | ||||||||||||||||||||||||| Sbjct: 777 agctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatg 836 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||| ||| | ||| | ||||||||||||||||||||||||||||||| Sbjct: 837 cgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggct 896 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactag 478 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 897 gcgaaagcggtaccaaatcgaggcaaactctgaatactag 936 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacag 1066
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 482 bits (243), Expect = e-133 Identities = 340/371 (91%), Gaps = 1/371 (0%) Strand = Plus / Minus Query: 254 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 313 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 314 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 373 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 374 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 433 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 434 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 493 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 494 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 553 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 554 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 613 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 614 tgcaaagacag 624 ||||||||||| Sbjct: 2752 tgcaaagacag 2742 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 221 tatggacccgaacct 235 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 480 bits (242), Expect = e-132 Identities = 416/468 (88%), Gaps = 12/468 (2%) Strand = Plus / Plus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||| | |||| ||||||||||||| ||||| | | |||| || Sbjct: 502 agggtgaaaag-aacccctattggggagtgaaatagaacatgaaaacata---agctacc 557 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | || | ||||||||||||||||||||||||||||||||||||| Sbjct: 558 aagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgac 615 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 ||||| | |||||| ||||||||| |||| ||||||||||| |||||||||| |||| Sbjct: 616 tcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaaagcaagtc 670 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| | ||||| |||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 671 ttcatagggcaaatgtcattgcttatgtacccgaacttgggtgatctaaccatgaccagg 730 Query: 258 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 317 ||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 731 atgaaatttggttgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 790 Query: 318 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaa 377 ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 791 tgagttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttctccccgaaa 850 Query: 378 tgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||| ||| ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 851 tgcgtttaggggcagcagtt-accggacatctaggggtaaagcactgtttcggtgcgggt 909 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 485 || |||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 910 ctcgagagcggtaccaaattgaggcaaactatgaatactagatatgac 957 Score = 165 bits (83), Expect = 2e-37 Identities = 107/115 (93%) Strand = Plus / Plus Query: 510 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 569 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 570 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||| ||| ||||||||||| |||||||| |||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacag 1114
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 403 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 404 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 462 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 463 aaactctgaatactagatatg 483 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 99.6 bits (50), Expect = 1e-17 Identities = 98/114 (85%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacag 1064 Score = 42.1 bits (21), Expect = 2.2 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaacc 64 ||||||||| |||||||| ||| ||||||||||||| ||||||| Sbjct: 487 ggtgaaaag-aacccccataggggagtgaaatagaacatgaaacc 530
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 403 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 404 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 462 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 463 aaactctgaatactagatatg 483 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 99.6 bits (50), Expect = 1e-17 Identities = 98/114 (85%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacag 4098 Score = 42.1 bits (21), Expect = 2.2 Identities = 40/45 (88%), Gaps = 1/45 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaacc 64 ||||||||| |||||||| ||| ||||||||||||| ||||||| Sbjct: 3521 ggtgaaaag-aacccccataggggagtgaaatagaacatgaaacc 3564
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 472 bits (238), Expect = e-130 Identities = 408/460 (88%), Gaps = 11/460 (2%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||| ||| |||| ||| Sbjct: 124778 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaatcgta---agctttcaa 124723 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 124722 gcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 124663 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 124662 ataggcagtggcgtggttaagggaatt-----caccggagccgtagcgaaagcgagtct- 124609 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 124608 aacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggccaggat 124549 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 124548 gaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 124489 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 || ||||||||| |||||||| ||| |||||| | ||||||||||||||||||||||||| Sbjct: 124488 agctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatg 124429 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||| ||| | ||| | ||||||||||||||||||||||||||||||| Sbjct: 124428 cgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggct 124369 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactag 478 ||| ||||||||||||||||| ||||||||||||||||| Sbjct: 124368 gcgaaagcggtaccaaatcgagtcaaactctgaatactag 124329 Score = 472 bits (238), Expect = e-130 Identities = 408/460 (88%), Gaps = 11/460 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||| ||| |||| ||| Sbjct: 95088 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaatcgta---agctttcaa 95143 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95144 gcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 95203 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 95204 ataggcagtggcgtggttaagggaatt-----caccggagccgtagcgaaagcgagtct- 95257 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 || |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 95258 aacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggccaggat 95317 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 95318 gaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatg 95377 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 || ||||||||| |||||||| ||| |||||| | ||||||||||||||||||||||||| Sbjct: 95378 agctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaaatg 95437 Query: 380 cgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggct 438 |||||||||||||| ||| | ||| | ||||||||||||||||||||||||||||||| Sbjct: 95438 cgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgggct 95497 Query: 439 gcgcgagcggtaccaaatcgaggcaaactctgaatactag 478 ||| ||||||||||||||||| ||||||||||||||||| Sbjct: 95498 gcgaaagcggtaccaaatcgagtcaaactctgaatactag 95537 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Minus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacag 124199 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacag 95667
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 470 bits (237), Expect = e-129 Identities = 347/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtgga 740 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 403 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 404 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 462 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 463 aaactctgaatactagatatg 483 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 99.6 bits (50), Expect = 1e-17 Identities = 98/114 (85%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacag 1064
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 458 bits (231), Expect = e-125 Identities = 241/243 (99%), Gaps = 1/243 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 445 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 446 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 505 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 506 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 565 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 catagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 625 Query: 260 gaa 262 ||| Sbjct: 626 gaa 628
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 446 bits (225), Expect = e-122 Identities = 359/401 (89%), Gaps = 2/401 (0%) Strand = Plus / Plus Query: 77 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 136 |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 4584 caagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagccggcga 4643 Query: 137 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 196 |||||||||||||||||||||||||||| | || ||||||||| |||||||||| ||| Sbjct: 4644 ctcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaaagcaagt 4702 Query: 197 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 256 ||| |||||| |||||||||| |||||||||||||| |||||||||| ||||| |||| Sbjct: 4703 ctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccag 4762 Query: 257 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 316 |||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| |||| Sbjct: 4763 gatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcgg 4822 Query: 317 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 376 ||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 4823 atgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaa 4882 Query: 377 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 435 |||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||| Sbjct: 4883 atgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgg 4942 Query: 436 gctgcgcgagcggtaccaaatcgaggcaaactctgaatact 476 ||| || || |||||||||||||||||||||||||||||| Sbjct: 4943 gctacgaaagtggtaccaaatcgaggcaaactctgaatact 4983 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 514 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 573 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 574 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 5114
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 446 bits (225), Expect = e-122 Identities = 359/401 (89%), Gaps = 2/401 (0%) Strand = Plus / Plus Query: 77 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 136 |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 551 caagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagccggcga 610 Query: 137 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 196 |||||||||||||||||||||||||||| | || ||||||||| |||||||||| ||| Sbjct: 611 ctcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaaagcaagt 669 Query: 197 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 256 ||| |||||| |||||||||| |||||||||||||| |||||||||| ||||| |||| Sbjct: 670 ctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccag 729 Query: 257 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 316 |||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| |||| Sbjct: 730 gatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcgg 789 Query: 317 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 376 ||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 790 atgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaa 849 Query: 377 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 435 |||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||| Sbjct: 850 atgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgg 909 Query: 436 gctgcgcgagcggtaccaaatcgaggcaaactctgaatact 476 ||| || || |||||||||||||||||||||||||||||| Sbjct: 910 gctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 514 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 573 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 574 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1081
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 446 bits (225), Expect = e-122 Identities = 359/401 (89%), Gaps = 2/401 (0%) Strand = Plus / Plus Query: 77 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 136 |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 551 caagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagccggcga 610 Query: 137 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 196 |||||||||||||||||||||||||||| | || ||||||||| |||||||||| ||| Sbjct: 611 ctcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaaagcaagt 669 Query: 197 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 256 ||| |||||| |||||||||| |||||||||||||| |||||||||| ||||| |||| Sbjct: 670 ctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccag 729 Query: 257 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 316 |||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| |||| Sbjct: 730 gatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcgg 789 Query: 317 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 376 ||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 790 atgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaa 849 Query: 377 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 435 |||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||| Sbjct: 850 atgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgg 909 Query: 436 gctgcgcgagcggtaccaaatcgaggcaaactctgaatact 476 ||| || || |||||||||||||||||||||||||||||| Sbjct: 910 gctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 131 bits (66), Expect = 3e-27 Identities = 99/110 (90%) Strand = Plus / Plus Query: 514 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 573 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 574 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagaca 1081
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 434 bits (219), Expect = e-118 Identities = 447/519 (86%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 434 bits (219), Expect = e-118 Identities = 406/462 (87%), Gaps = 11/462 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| |||| ||| Sbjct: 484 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agcttacaa 539 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 540 gcagtgggaggaggttttgatctctgaccgcgtgcctattgaagaatgagccggcgactt 599 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||| |||||||| | | || ||||||||| ||||||||||||||||| Sbjct: 600 ataggcagtggctaggttaaggta-caaaa---accggagccatagcgaaagcgagtctt 655 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||| ||||||| ||| |||||||||| |||||||||| ||||| ||||||| Sbjct: 656 aatagggcgat-gtcactgtctatagacccgaacccgggtgatctaaccatggccaggat 714 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||| | ||||||| || || |||||||||||| ||||||||| |||| ||||||| Sbjct: 715 gaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatg 774 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||| Sbjct: 775 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatg 834 Query: 380 cgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||| |||| | || ||||||||||||||||||||||||||||||| Sbjct: 835 cgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcgggc 894 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 479 |||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 895 tgcgagagcggtaccaaatcgatgcaaactctgaatactaga 936 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 1063
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 434 bits (219), Expect = e-118 Identities = 406/462 (87%), Gaps = 11/462 (2%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| |||| ||| Sbjct: 115178 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agcttacaa 115123 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 115122 gcagtgggaggaggttttgatctctgaccgcgtgcctattgaagaatgagccggcgactt 115063 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||| |||||||| | | || ||||||||| ||||||||||||||||| Sbjct: 115062 ataggcagtggctaggttaaggta-caaaa---accggagccatagcgaaagcgagtctt 115007 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||| ||||||| ||| |||||||||| |||||||||| ||||| ||||||| Sbjct: 115006 aatagggcgat-gtcactgtctatagacccgaacccgggtgatctaaccatggccaggat 114948 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||| | ||||||| || || |||||||||||| ||||||||| |||| ||||||| Sbjct: 114947 gaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatg 114888 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||| Sbjct: 114887 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatg 114828 Query: 380 cgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||| |||| | || ||||||||||||||||||||||||||||||| Sbjct: 114827 cgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcgggc 114768 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 479 |||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 114767 tgcgagagcggtaccaaatcgatgcaaactctgaatactaga 114726 Score = 434 bits (219), Expect = e-118 Identities = 406/462 (87%), Gaps = 11/462 (2%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| |||| ||| Sbjct: 86810 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agcttacaa 86865 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86866 gcagtgggaggaggttttgatctctgaccgcgtgcctattgaagaatgagccggcgactt 86925 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||||||||||| |||||||| | | || ||||||||| ||||||||||||||||| Sbjct: 86926 ataggcagtggctaggttaaggta-caaaa---accggagccatagcgaaagcgagtctt 86981 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 ||||||||||| ||||||| ||| |||||||||| |||||||||| ||||| ||||||| Sbjct: 86982 aatagggcgat-gtcactgtctatagacccgaacccgggtgatctaaccatggccaggat 87040 Query: 260 gaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatg 319 ||||||| | ||||||| || || |||||||||||| ||||||||| |||| ||||||| Sbjct: 87041 gaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcggatg 87100 Query: 320 agttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatg 379 ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||| Sbjct: 87101 agttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaaatg 87160 Query: 380 cgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcgggc 437 |||||||||||||| |||| | || ||||||||||||||||||||||||||||||| Sbjct: 87161 cgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcgggc 87220 Query: 438 tgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 479 |||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 87221 tgcgagagcggtaccaaatcgatgcaaactctgaatactaga 87262 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Minus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 114599 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagaca 87389
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 426 bits (215), Expect = e-116 Identities = 446/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 426 bits (215), Expect = e-116 Identities = 447/519 (86%), Gaps = 9/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1015 cctaaatgaccactaagttataaaggaggtaggggtgca 1053
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 426 bits (215), Expect = e-116 Identities = 446/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 424 bits (214), Expect = e-115 Identities = 360/406 (88%), Gaps = 2/406 (0%) Strand = Plus / Plus Query: 77 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 136 ||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||| Sbjct: 546 caagcagtgggagaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcga 605 Query: 137 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 196 ||||||| ||||||| ||||||||||| | | || |||||| |||||||||| ||| Sbjct: 606 ctcatagatagtggctgggttaagggaatttatgc-actggagccatagcgaaagcaagt 664 Query: 197 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 256 ||| ||||| |||||||||| |||||||||||||| |||||||||| ||||| |||| Sbjct: 665 cttttcagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccag 724 Query: 257 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 316 |||||||||||| |||||||||| ||||||| ||||||| ||||||||| |||| |||| Sbjct: 725 gatgaagcttgggtgaaactaagtggaggtcccaaccgaccgatgttgaaaaatcggcgg 784 Query: 317 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 376 ||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 785 atgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaa 844 Query: 377 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 435 |||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||||| Sbjct: 845 atgcgttgaggcgcagcaattaactggactatccaggggtaaagcactgtttcggtgcgg 904 Query: 436 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 481 |||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 905 gctgcgaaagcggtaccaaatcgagacaaactctgaatactggata 950 Score = 139 bits (70), Expect = 1e-29 Identities = 100/110 (90%) Strand = Plus / Plus Query: 514 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 573 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 574 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagaca 1076
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 159 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 160 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 219 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 220 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 279 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 280 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 340 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 383 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 373 bits (188), Expect = e-100 Identities = 209/216 (96%) Strand = Plus / Plus Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 461 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 520 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 521 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 581 taaatgaccgctcagtgataaaggaggtgggggtgc 616 ||||||| |||||||||||||||||||| ||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc 532
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 418 bits (211), Expect = e-114 Identities = 445/519 (85%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 220 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtatcc 836 Query: 401 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 837 ag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 461 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 518 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 519 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 578 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 579 cctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1016 cctaaatgaccactaagttataaaggaggtaggggtgca 1054
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 412 bits (208), Expect = e-112 Identities = 356/403 (88%), Gaps = 3/403 (0%) Strand = Plus / Plus Query: 217 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 276 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 277 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 336 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 337 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 396 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 397 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 456 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 457 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 514 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 515 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 574 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 575 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||||||||||||| || ||| ||||||||||| |||||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgca 1054 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 160 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 161 gg 162 || Sbjct: 602 gg 603
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 402 bits (203), Expect = e-109 Identities = 358/409 (87%), Gaps = 8/409 (1%) Strand = Plus / Plus Query: 77 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 136 ||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||| Sbjct: 944 caagcagtgggagaagaatctaatctttgaccgcgtgcctgttgaagaatgagccggcga 1003 Query: 137 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 196 || ||| |||||||| |||||||||| | |||| ||||||||||||||||||| Sbjct: 1004 cttataagcagtggcctggttaagggtat-------accgaagccgtagcgaaagcgagt 1056 Query: 197 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 256 | | |||||| |||||||| ||||||||||||||| |||||||||||||||| |||| Sbjct: 1057 cattcaagggcgcatgtcactgtttatggacccgaacccgggtgatctatccatggccag 1116 Query: 257 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 316 | |||||||||| |||| | ||| |||| |||||||||||| ||||||| || |||||| Sbjct: 1117 ggtgaagcttgggtgaagccaagtggaggcccgaaccgactggtgttgaaaaaccagcgg 1176 Query: 317 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 376 ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1177 atgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaa 1236 Query: 377 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 435 ||||||||||||||||| |||||| || | ||||||||||||||||||||||||||| Sbjct: 1237 atgcgttgaggcgcagcgattgactaaactgtttaggggtaaagcactgtttcggtgcgg 1296 Query: 436 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 484 |||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 1297 gctgcgaaagcggtaccaaatcgaggcaaactctgaatactagacatga 1345 Score = 143 bits (72), Expect = 8e-31 Identities = 102/112 (91%) Strand = Plus / Plus Query: 513 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 572 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 573 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||| |||||||||| | |||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacag 1469
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 400 bits (202), Expect = e-108 Identities = 358/408 (87%), Gaps = 9/408 (2%) Strand = Plus / Plus Query: 77 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 136 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 497 caagcagtgggaggagaatagaatctctgaccgcgtgcctgttgaagaatgagccggcga 556 Query: 137 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 196 || ||| | |||||| |||||||| ||| || ||||||||||||||||| ||| Sbjct: 557 cttataagtagtggcctggttaagagaat-------actggagccgtagcgaaagcaagt 609 Query: 197 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 256 | || | || || |||||||| |||| |||||||||| |||||||||||||||| |||| Sbjct: 610 catatttgg-cgcatgtcactgtttatagacccgaacccgggtgatctatccatggccag 668 Query: 257 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 316 | |||| ||||| |||| | ||| ||||||||||||||||||||||||| ||||||||| Sbjct: 669 ggtgaaacttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcgg 728 Query: 317 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 376 ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 729 atgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaa 788 Query: 377 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 435 ||||||||||||||||| |||| ||||| | ||||||||||||||||||||||||||| Sbjct: 789 atgcgttgaggcgcagcgattgattggactacttaggggtaaagcactgtttcggtgcgg 848 Query: 436 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 483 |||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 849 gctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatg 896 Score = 165 bits (83), Expect = 2e-37 Identities = 104/111 (93%) Strand = Plus / Plus Query: 513 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 572 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 573 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 |||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagaca 1022
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 377 bits (190), Expect = e-101 Identities = 358/410 (87%), Gaps = 8/410 (1%) Strand = Plus / Plus Query: 76 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 135 ||||||||||||||| || || | |||||||| |||||| ||||||||||||| ||||| Sbjct: 531 ccaagcagtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcg 588 Query: 136 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 195 ||||||| | |||||| ||||||||| |||| ||||||||||| |||||||||| || Sbjct: 589 actcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaaagcaag 643 Query: 196 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 255 |||| |||||| | ||||| ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 644 tcttcatagggaaaatgtcattgcttgtggacccgaacttgggtgatctaaccatgacca 703 Query: 256 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 315 ||||| | |||| | |||||||| | |||| ||||||||||||||||||||||||||| Sbjct: 704 ggatgcaatttggttaaaactaagtgggggtctgaaccgactgatgttgaagaatcagcg 763 Query: 316 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 375 ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||| Sbjct: 764 gatgagttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttcgccccga 823 Query: 376 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 435 ||||| || ||||||||||||| || || ||||||||||||||||| ||||| ||||||| Sbjct: 824 aatgcatttaggcgcagcagtt-accgggcatctaggggtaaagcattgttttggtgcgg 882 Query: 436 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 485 | || |||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 883 gtcacgagagcggtaccaaattgaggcagactatgaatactagatatgac 932 Score = 121 bits (61), Expect = 3e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 488 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 547 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 548 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 607 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 608 t 608 | Sbjct: 1064 t 1064
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 162 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 163 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 220 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 399 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 400 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 457 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 458 gaggcaaactctgaatactag 478 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtg 609 |||||||||| |||| ||||| |||| |||||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtg 1120
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 347 bits (175), Expect = 3e-92 Identities = 175/175 (100%) Strand = Plus / Minus Query: 450 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 510 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 570 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 345
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 3e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 402 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 403 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 461 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 462 caaactctgaatactagat 480 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtg 609 |||||||||| |||| ||||| |||| ||||||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtg 1200
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 3e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 231 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 232 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 291 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 292 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 351 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 352 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 407 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 408 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 467 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 468 ctgaatactag 478 ||||||||| Sbjct: 932 aagaatactag 942 Score = 163 bits (82), Expect = 9e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtg 609 ||||||||||||||| ||||| |||||||||||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtg 1057 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 3e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 173 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 232 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 233 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 292 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 293 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 352 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 353 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 411 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 412 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 471 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 472 atactagatatga 484 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 155 bits (78), Expect = 2e-34 Identities = 105/114 (92%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacag 1028 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 77 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 136 |||||||||||||| || | || ||||||||||||||||||||||||||||||||||| Sbjct: 503 caagcagtgggaggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcga 562 Query: 137 ctcataggcagtggcttggttaagg 161 || |||||||||||| ||||||||| Sbjct: 563 cttataggcagtggcctggttaagg 587
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 102 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 162 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 220 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 401 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 459 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 460 ggcaaactctgaatacta 477 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 4e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 102 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 162 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 220 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 221 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 280 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 281 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 340 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 341 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 400 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 401 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 459 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 460 ggcaaactctgaatacta 477 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 571 ctaaggcccctaaat 585 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 571 ctaaggcccctaaat 585 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 109 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 168 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 169 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 227 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 228 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 287 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 288 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 347 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 348 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 406 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 407 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 466 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 467 tctgaatacta 477 ||||||||||| Sbjct: 2742 tctgaatacta 2752 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 584 atgaccgctcagtgataaaggaggtgg 610 || | ||| |||| ||||||||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtgg 2864
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 1e-82 Identities = 174/179 (97%) Strand = Plus / Plus Query: 166 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 225 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 226 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 285 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 286 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 344 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 315 bits (159), Expect = 1e-82 Identities = 329/382 (86%), Gaps = 9/382 (2%) Strand = Plus / Plus Query: 102 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaagg 597 Query: 162 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgc 219 | ||| | ||| |||| ||||||||| ||||| |||||||| | | |||||| Sbjct: 598 g---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatcgtcacttt 653 Query: 220 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 279 ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| Sbjct: 654 ttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaag 713 Query: 280 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 339 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 714 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 773 Query: 340 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt-- 397 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 774 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgg 833 Query: 398 -gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 456 ||| || |||||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 834 cgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaat 893 Query: 457 cgaggcaaactctgaatactag 478 || ||||||| ||||||||| Sbjct: 894 cgtagcaaactaagaatactag 915 Score = 107 bits (54), Expect = 4e-20 Identities = 87/98 (88%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtg 609 ||||||||| |||| ||||| |||| ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtg 1030
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 282 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 341 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 342 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 401 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 402 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 461 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 462 caaactctgaatactagatat 482 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 311 bits (157), Expect = 1e-81 Identities = 157/157 (100%) Strand = Plus / Plus Query: 468 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 528 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 588 ccgctcagtgataaaggaggtgggggtgcaaagacag 624 ||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacag 157
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 311 bits (157), Expect = 1e-81 Identities = 245/271 (90%), Gaps = 10/271 (3%) Strand = Plus / Minus Query: 18 agggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctccc 77 ||||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||| Sbjct: 261 agggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctccc 206 Query: 78 aagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgac 137 ||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| Sbjct: 205 aagcagtgggaggagcccgggg-ctctgaccgcgtgcctgttgaagaatgagccggcgac 147 Query: 138 tcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtc 197 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 146 tcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcgagtc 92 Query: 198 ttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 257 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91 ttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgaccagg 32 Query: 258 atgaagcttggatgaaactaagcagaggtcc 288 ||||||||||| |||||||||| ||||||| Sbjct: 31 atgaagcttgggtgaaactaagtggaggtcc 1
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 209 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 268 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 269 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 328 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 329 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 388 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 389 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 445 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 446 cggtaccaaatcgaggcaaactctgaatactaga 479 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 572 taaggcccctaaatgaccgctcagtg 597 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 225 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 284 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 285 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 344 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 345 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 403 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 404 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 462 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 463 aaactctgaatactagatatgac 485 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 514 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 573 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 574 aggcccctaaatg 586 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgact 138 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 178 agccgtagcgaaagcgagtcttaatagggcgat 210 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 225 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 284 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 285 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 344 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 345 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 403 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 404 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 462 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 463 aaactctgaatactagatatgac 485 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 514 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 573 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 574 aggcccctaaatg 586 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgact 138 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 178 agccgtagcgaaagcgagtcttaatagggcgat 210 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 225 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 284 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 285 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 344 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 345 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 403 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 404 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 462 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 463 aaactctgaatactagatatgac 485 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 514 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 573 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 574 aggcccctaaatg 586 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgact 138 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 178 agccgtagcgaaagcgagtcttaatagggcgat 210 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 9e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 401 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 402 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 461 gcaaactctgaatacta 477 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 9e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 401 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 402 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 461 gcaaactctgaatacta 477 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 584 atgaccgctcagtgataaaggaggtg 609 ||| ||||| |||| |||||||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtg 192915 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 584 atgaccgctcagtgataaaggaggtg 609 ||| ||||| |||| |||||||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtg 143867
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 295 bits (149), Expect = 9e-77 Identities = 162/165 (98%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 108038 ggtgaaaag-aacccccagtgggtaatgaaatagaacgtgaaaccgtgctgagctcccaa 107980 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107979 ccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 107920 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgta 184 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107919 ataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 5e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 175 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 234 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 235 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 294 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 295 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 354 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 355 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 414 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 415 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 474 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 475 ct 476 || Sbjct: 2489 ct 2490 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtggg 611 |||||||||||||| | ||| |||||||||||||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtggg 2604 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 102 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 212 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 271 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 272 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 331 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 332 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 391 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 392 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 448 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 449 taccaaatcgaggcaaactctgaatactaga 479 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 163 bits (82), Expect = 9e-37 Identities = 94/98 (95%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtg 609 ||||||||||||||||||||| |||| ||||||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtg 1063 Score = 89.7 bits (45), Expect = 1e-14 Identities = 54/57 (94%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 159 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 9e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 231 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 232 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 291 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 292 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 351 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 352 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 410 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 411 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 470 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 471 aatactagata 481 ||||||||||| Sbjct: 921 aatactagata 931 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 609 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 1042 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgact 138 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 9e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 231 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 232 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 291 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 292 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 351 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 352 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 410 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 411 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 470 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 471 aatactagata 481 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 133 bits (67), Expect = 8e-28 Identities = 91/99 (91%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 609 |||||||||| |||||| || | ||||| |||||||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtg 25851 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgact 138 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 233 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 234 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 293 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 294 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 353 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 354 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 412 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 413 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 472 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 473 tac 475 ||| Sbjct: 549 tac 551 Score = 105 bits (53), Expect = 2e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 611 |||||| ||| ||||| ||| |||||||||||||||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtggg 666 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 111 gtgcctgttgaagaatgagccggcgactcatagg 144 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 178 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 237 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 238 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 297 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 298 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 357 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 358 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 414 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 415 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 474 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 475 ctaga 479 ||||| Sbjct: 935 ctaga 939 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtg 609 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtg 1054 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 159 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 184 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 242 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 243 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 302 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 303 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 362 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 363 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 419 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 420 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 476 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 572 taaggcccctaaat 585 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 144 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 178 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 237 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 238 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 297 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 298 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 357 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 358 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 414 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 415 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 474 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 475 ctaga 479 ||||| Sbjct: 2817 ctaga 2821 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtg 609 ||||||||||||||| ||||| |||| |||||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtg 2936 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 101 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 159 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 187 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 246 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 247 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 306 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 307 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 366 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 367 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 425 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 426 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 187 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 246 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 247 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 306 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 307 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 366 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 367 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 425 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 426 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 103 bits (52), Expect = 7e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtggg 611 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtggg 189971 Score = 103 bits (52), Expect = 7e-19 Identities = 88/100 (88%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtggg 611 |||||||||||||| | ||| |||| |||||||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtggg 151398 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 110 cgtgcctgttgaagaatgagccggcgactcatag 143 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 110 cgtgcctgttgaagaatgagccggcgactcatag 143 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 5e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 401 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 402 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 460 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 461 gcaaactctgaatacta 477 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 584 atgaccgctcagtgataaaggaggtg 609 ||| ||||| |||| |||||||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtg 1084
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 111 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 170 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 171 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 230 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 231 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 290 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 291 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 350 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 351 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 408 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 409 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 468 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 469 tgaatacta 477 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 8e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 401 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 402 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 461 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 462 caaactctgaatacta 477 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 514 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 573 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 574 aggcccctaaat 585 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 514 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 573 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 574 aggcccctaaat 585 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 276 bits (139), Expect = 8e-71 Identities = 146/147 (99%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 539 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 599 Query: 140 ataggcagtggcttggttaagggaacg 166 ||||||||||||||||||||||||||| Sbjct: 600 ataggcagtggcttggttaagggaacg 626
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | | || |||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtggg 5558 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | | || |||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtggg 212214 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 361 agtgaaatagaacatgaaaccgtg 384
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 274 bits (138), Expect = 3e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 476 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 535 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 536 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 595 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 596 tgataaaggaggtgggggtgcaaaga 621 |||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaaga 19152975
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 274 bits (138), Expect = 3e-70 Identities = 144/146 (98%) Strand = Plus / Plus Query: 476 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 535 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 536 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 595 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 596 tgataaaggaggtgggggtgcaaaga 621 |||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaaga 76370
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 220 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 279 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 280 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 339 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 340 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 399 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 400 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 456 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 457 cgaggcaaactctgaatact 476 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtg 609 |||||||||||||| || ||| |||| |||||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtg 1062 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 220 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 279 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 280 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 339 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 340 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 399 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 400 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 456 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 457 cgaggcaaactctgaatact 476 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtg 609 |||||||||||||| || ||| |||| |||||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtg 2800 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 5e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 163 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 164 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 223 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 224 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 283 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 284 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 343 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 344 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 389 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | |||| |||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtggg 3259 Score = 91.7 bits (46), Expect = 3e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 411 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 469 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 470 gaatac 475 |||||| Sbjct: 3139 gaatac 3144 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 2719 agtgaaatagaacatgaaaccgtg 2742
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 228 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 229 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 288 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 289 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 348 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 349 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 405 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 406 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 464 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 465 actctgaatactagata 481 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 546 agagggaaacagcccggatcaccagctaaggcccctaaatg 586 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 228 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 229 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 288 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 289 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 348 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 349 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 405 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 406 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 464 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 465 actctgaatactagata 481 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 546 agagggaaacagcccggatcaccagctaaggcccctaaatg 586 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 8e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 187 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 246 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 247 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 306 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 307 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 366 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 367 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 423 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 424 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 7e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagaca 678 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 102 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 146 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 233 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 234 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 293 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 294 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 353 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 354 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 410 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 411 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 470 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 471 aatactag 478 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 8e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 233 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 234 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 293 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 294 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 353 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 354 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 410 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 411 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 470 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 471 aatactag 478 |||||||| Sbjct: 48126 aatactag 48119 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 572 taaggcccctaaatg 586 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 572 taaggcccctaaatg 586 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 8e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 173 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 232 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 233 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 292 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 293 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 352 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 353 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 406 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 407 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 466 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 467 tctgaatact 476 | ||||||| Sbjct: 924 taagaatact 933 Score = 131 bits (66), Expect = 3e-27 Identities = 90/98 (91%) Strand = Plus / Plus Query: 508 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 567 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 568 cagctaaggcccctaaatgaccgctcagtgataaagga 605 ||||||||||||| |||| |||||||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaagga 1045 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 559 ctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 266 bits (134), Expect = 8e-68 Identities = 144/146 (98%), Gaps = 1/146 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 499 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 gcagtgggaggggaaattgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 559 Query: 140 ataggcagtggcttggttaagggaac 165 |||||||||||||||||||||||||| Sbjct: 560 ataggcagtggcttggttaagggaac 585
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 8e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | || |||||||||||||||||| Sbjct: 356490 atcagtactaagtgataaaggaggtggg 356517 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcga 459 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 355977 agtgaaatagaacatgaaaccgtg 356000
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 264 bits (133), Expect = 3e-67 Identities = 220/247 (89%), Gaps = 9/247 (3%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||||||||| Sbjct: 2530 ggtgaaaag-aacccccatcggggagtgaaatagaacatgaaaccgta---agctcccaa 2585 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2586 gcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagccggcgactt 2645 Query: 140 ataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 199 ||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2646 ataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaagcgagtctt 2700 Query: 200 aatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggat 259 |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2701 cctagggcaattgtcactacttatggacccgaacctgggtgatctaaccatgaccaggat 2760 Query: 260 gaagctt 266 ||||||| Sbjct: 2761 gaagctt 2767
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 262 bits (132), Expect = 1e-66 Identities = 323/379 (85%), Gaps = 7/379 (1%) Strand = Plus / Plus Query: 102 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 ||||||| ||||| ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 2321 tctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-ggttaagg 2379 Query: 162 -gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattgtcactgc 219 | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | ||||||| Sbjct: 2380 cgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcgtcactgt 2436 Query: 220 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 279 ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | |||||| Sbjct: 2437 ttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaacactaag 2496 Query: 280 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 339 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2497 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaa 2556 Query: 340 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 399 ||||| ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2557 tgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttga 2616 Query: 400 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 458 | | | ||||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 2617 tgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcg 2676 Query: 459 aggcaaactctgaatacta 477 ||||||||||||||||||| Sbjct: 2677 aggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 3e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 572 taaggcccctaaat 585 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | | || |||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtggg 2137742 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | | || |||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtggg 477118 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 2138282 agtgaaatagaacatgaaaccgtg 2138259 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 476578 agtgaaatagaacatgaaaccgtg 476601
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 187 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 246 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 247 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 306 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 307 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 366 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 367 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 423 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 424 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 113 bits (57), Expect = 7e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagaca 678 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 146 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 102 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 162 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 221 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 222 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 281 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 282 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 341 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 342 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 393 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 109 bits (55), Expect = 1e-20 Identities = 97/111 (87%) Strand = Plus / Plus Query: 513 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 572 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 573 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagaca 2801
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | | || |||||||||||||||||| Sbjct: 339020 atcaacactaagtgataaaggaggtggg 338993 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | | || |||||||||||||||||| Sbjct: 132080 atcaacactaagtgataaaggaggtggg 132053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 339533 agtgaaatagaacatgaaaccgtg 339510 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 132593 agtgaaatagaacatgaaaccgtg 132570
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 361 agtgaaatagaacatgaaaccgtg 384
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 361 agtgaaatagaacatgaaaccgtg 384
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 361 agtgaaatagaacatgaaaccgtg 384
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 361 agtgaaatagaacatgaaaccgtg 384
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 361 agtgaaatagaacatgaaaccgtg 384
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 258 bits (130), Expect = 2e-65 Identities = 137/138 (99%), Gaps = 1/138 (0%) Strand = Plus / Plus Query: 20 ggtgaaaagnaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 79 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 ggtgaaaag-aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaa 412 Query: 80 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 gcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 472 Query: 140 ataggcagtggcttggtt 157 |||||||||||||||||| Sbjct: 473 ataggcagtggcttggtt 490
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 178 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 235 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 356 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 412 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 413 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 471 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 472 atactagatatg 483 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 572 taaggcccctaaatg 586 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 162 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 tgggtagtgaaatagaacgtgaaaccgt 66 |||| ||||||||||||| ||||||||| Sbjct: 526 tggggagtgaaatagaacatgaaaccgt 553
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 114 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 173 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 232 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 233 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 292 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 293 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 352 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 353 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 411 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 412 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 471 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 472 atacta 477 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 114 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 173 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 232 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 233 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 292 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 293 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 352 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 353 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 411 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 412 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 471 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 472 atacta 477 |||||| Sbjct: 19901 atacta 19906 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Minus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | ||| |||||||||||| ||||| Sbjct: 39408 ataattgctaagtgataaaggatgtggg 39381 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | ||| |||||||||||| ||||| Sbjct: 19992 ataattgctaagtgataaaggatgtggg 20019
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 1e-63 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 228 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 229 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 288 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 289 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 348 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 349 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 405 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 406 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 464 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 465 actctgaatactagata 481 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 750 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 546 agagggaaacagcccggatcaccagctaaggcccctaaatg 586 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 109 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 168 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 169 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 228 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 229 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 288 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 289 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 348 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 349 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 408 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 409 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 467 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 468 ctgaatac 475 | |||||| Sbjct: 544 cagaatac 551 Score = 113 bits (57), Expect = 7e-22 Identities = 90/101 (89%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtggg 611 |||||| ||||||||| ||| |||| ||||||||||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtggg 666 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 126 agtgaaatagaacatgaaaccgtg 149
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 364 ggttctccccgaaatgcgttgaggcgcagc 393 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 127 bits (64), Expect = 5e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagaca 679 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 411 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 470 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 471 aatac 475 ||||| Sbjct: 548 aatac 552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 102 tctgaccgcgtgcctgttgaagaatgagccggcga 136 |||||||||||||||||||||| |||||||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagcatgagccggcga 216
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 364 ggttctccccgaaatgcgttgaggcgcagc 393 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 125 bits (63), Expect = 2e-25 Identities = 90/99 (90%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtg 609 |||||| ||| ||||||| ||| |||||||||||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtg 665 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 411 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 470 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 471 aatac 475 ||||| Sbjct: 548 aatac 552 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 5e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 232 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 233 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 292 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 293 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 352 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 353 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 410 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 411 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 469 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 470 gaatactagatatg 483 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 572 taaggcccctaaatg 586 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 152 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 tgggtagtgaaatagaacgtgaaaccgt 66 |||| ||||||||||||| ||||||||| Sbjct: 518 tggggagtgaaatagaacatgaaaccgt 545
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 144 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 348 agtgaaatagaacatgaaaccgtg 371
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 144 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 348 agtgaaatagaacatgaaaccgtg 371
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 5e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 144 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 348 agtgaaatagaacatgaaaccgtg 371
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 5e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 282 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 341 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 342 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 401 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 402 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 458 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 459 aggcaaactctgaatactag 478 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 105 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 570 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 571 ctaaggcccctaaatga 587 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 211 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 266 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 5e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 232 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 233 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 292 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 293 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 352 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 353 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 410 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 411 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 469 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 470 gaatactagatatg 483 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 572 taaggcccctaaatg 586 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 152 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 tgggtagtgaaatagaacgtgaaaccgt 66 |||| ||||||||||||| ||||||||| Sbjct: 518 tggggagtgaaatagaacatgaaaccgt 545
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 173 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 232 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 233 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 292 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 293 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 352 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 353 cagagctagctggttctccccgaaatgcgttgaggcgcagc 393 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 137 bits (69), Expect = 5e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagaca 1056 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 102 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 406 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 465 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 466 ctctgaatactagata 481 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 7e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 230 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 231 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 290 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 291 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 350 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 351 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 407 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 408 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 466 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 467 tctgaatactagatatg 483 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 532 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 586 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 tgggtagtgaaatagaacgtgaaaccgt 66 |||| ||||||||||||| ||||||||| Sbjct: 518 tggggagtgaaatagaacatgaaaccgt 545
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 7e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 231 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 232 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 291 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 292 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 351 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 352 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 409 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 410 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 468 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 469 tgaatactagatat 482 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 161 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 546 agagggaaacagcccggatcaccagctaaggcccctaaatga 587 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 364 ggttctccccgaaatgcgttgaggcgcagcagttg 398 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 137 bits (69), Expect = 5e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagaca 681 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 411 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 470 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 471 aatac 475 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 102 tctgaccgcgtgcctgttgaagaatgagccggcga 136 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 233 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 234 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 293 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 294 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 353 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 354 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 411 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 412 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 470 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 471 aatac 475 ||||| Sbjct: 547 aatac 551 Score = 113 bits (57), Expect = 7e-22 Identities = 99/113 (87%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagaca 678 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 146 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 3e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 174 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 233 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 234 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 293 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 294 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 353 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 354 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 411 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 412 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 470 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 471 aatactagat 480 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 103 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 546 agagggaaacagcccggatcaccagctaaggcccctaaatg 586 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 364 ggttctccccgaaatgcgttgaggcg 389 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | |||| |||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtggg 320641 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcga 459 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 320101 agtgaaatagaacatgaaaccgtg 320124
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | | || |||||||||||||||||| Sbjct: 1775466 atcaacactaagtgataaaggaggtggg 1775439 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | | || |||||||||||||||||| Sbjct: 376603 atcaacactaagtgataaaggaggtggg 376630 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 1775979 agtgaaatagaacatgaaaccgtg 1775956 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 376090 agtgaaatagaacatgaaaccgtg 376113
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 364 ggttctccccgaaatgcgttgaggcg 389 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | |||| |||||||||||||||||| Sbjct: 3037 attaacgctaagtgataaaggaggtggg 3064 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcga 459 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 2524 agtgaaatagaacatgaaaccgtg 2547
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 364 ggttctccccgaaatgcgttgaggcg 389 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | |||| |||||||||||||||||| Sbjct: 3038 attaacgctaagtgataaaggaggtggg 3065 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcga 459 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 2525 agtgaaatagaacatgaaaccgtg 2548
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | | || |||||||| ||||||||| Sbjct: 3265 atcaacactaagtgataagggaggtggg 3292 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 2752 agtgaaatagaacatgaaaccgtg 2775
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 364 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 420 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 421 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 475 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 115 bits (58), Expect = 2e-22 Identities = 94/106 (88%) Strand = Plus / Plus Query: 512 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 571 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 572 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 617 ||||| ||| |||||| || ||||| |||||||||||| ||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgca 671 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 102 tctgaccgcgtgcctgttgaagaatgagccggcgact 138 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 364 ggttctccccgaaatgcgttgaggcg 389 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | |||| |||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtggg 19816 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcga 459 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 20356 agtgaaatagaacatgaaaccgtg 20333
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 364 ggttctccccgaaatgcgttgaggcg 389 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Minus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | |||| |||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtggg 1570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcga 459 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 2110 agtgaaatagaacatgaaaccgtg 2087
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 364 ggttctccccgaaatgcgttgaggcg 389 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 87.7 bits (44), Expect = 4e-14 Identities = 77/88 (87%) Strand = Plus / Plus Query: 524 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 583 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 584 atgaccgctcagtgataaaggaggtggg 611 || | |||| |||||||||||||||||| Sbjct: 316103 attaacgctaagtgataaaggaggtggg 316130 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 425 tttcggtgcgggctgcgcgagcggtaccaaatcga 459 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 315590 agtgaaatagaacatgaaaccgtg 315613
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 364 ggttctccccgaaatgcgttgaggcg 389 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 184 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 243 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 244 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 303 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 304 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 363 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 364 ggttctccccgaaatgcgttgaggcg 389 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 411 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 470 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 471 aatac 475 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 411 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 470 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 471 aatac 475 ||||| Sbjct: 1049320 aatac 1049316 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1659555 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 511 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 570 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 571 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagaca 623 |||||| || |||| | || |||||||||||||||||| ||||| ||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagaca 1049189 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1659061 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1659108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1049683 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1049636 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 1659004 agtgaaatagaacatgaaaccgtg 1659027 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 1049740 agtgaaatagaacatgaaaccgtg 1049717
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 176 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 235 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 236 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 295 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 296 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 355 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 356 agctagctggttctccccgaaatgcgttgaggcg 389 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 104 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 151 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 agtgaaatagaacgtgaaaccgtg 67 ||||||||||||| |||||||||| Sbjct: 362 agtgaaatagaacatgaaaccgtg 385 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,742,455 Number of Sequences: 3902068 Number of extensions: 3742455 Number of successful extensions: 75965 Number of sequences better than 10.0: 2747 Number of HSP's better than 10.0 without gapping: 2765 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 59170 Number of HSP's gapped (non-prelim): 16140 length of query: 624 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 601 effective length of database: 17,143,297,704 effective search space: 10303121920104 effective search space used: 10303121920104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
