ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal17j23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY123422.1| Triticum aestivum putative Rieske Fe-S precursor protein mRNA, complete cds Length = 866 Score = 906 bits (457), Expect = 0.0 Identities = 511/529 (96%) Strand = Plus / Plus Query: 1 gctcgctcgatcgtcctctccgccctgtagcagccagccaccatggcctccaccgcgctc 60 |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| Sbjct: 10 gctcgctcgatcgtcctccccgccctgcagcagccagccaccatggcctctaccgcgctc 69 Query: 61 tccaccgcctccaaccccacccagctctgccgaacccgtgcgagctcgctatgcaagccc 120 ||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 70 tccaccgcctccaaccctacccagctctgccggacccgtgcaagctcgctgtgcaagccc 129 Query: 121 gtcaagggcctgggcttcggccgggagcgcatcccgaggaacatcacatgcatggccggc 180 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 130 gtcaagggcctgggcttcggccgggagcgcatcccgaggaacatcacctgcatggccggc 189 Query: 181 agcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgctg 240 |||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| Sbjct: 190 agcatctccgcggaccgcgtgccggacatgagcaagagggagctgatgaacctgctcctg 249 Query: 241 ctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcgtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 ctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcgtc 309 Query: 301 ccggccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacgac 360 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 cccgccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacgac 369 Query: 361 atcctcgtcgaggattggctcaagacgcacggccccaacgaccgcacgctcgcccagggg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 370 atcctcgtcgaggactggctcaagacgcacggccccaacgaccgcacgctggcccagggg 429 Query: 421 ctcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacggg 480 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 430 ctcaagggtgatcctacctaccttgtggtggagtccgacaagacccttgccacctacggg 489 Query: 481 atcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccg 529 ||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 490 atcaacgccgtgtgcacgcatcttggatgcgtcgtgccgtggaacgccg 538
>dbj|AK071634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100K03, full insert sequence Length = 1082 Score = 347 bits (175), Expect = 2e-92 Identities = 307/351 (87%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| | || |||||||||||||||||| ||||| | |||||||||||||||| | Sbjct: 199 gcagcatcccggccgaccgcgtcccggacatgggcaagcgccagctgatgaacctcctcc 258 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 259 tgctcggcgccatctcgctccccaccgtcggcatgctcgtcccctacggcgccttcttca 318 Query: 299 tcccggccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacg 358 |||| ||||| ||||||| | || ||| ||| | ||||||||||||||||||||||| Sbjct: 319 tccccgccgggtccgggaacgccggcggcgggcaggtcgccaaggacaagctcggcaacg 378 Query: 359 acatcctcgtcgaggattggctcaagacgcacggccccaacgaccgcacgctcgcccagg 418 || | |||| |||||| ||||||||||| |||||||||||||||||||| ||| |||||| Sbjct: 379 acgtgctcgccgaggagtggctcaagacacacggccccaacgaccgcaccctcacccagg 438 Query: 419 ggctcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacg 478 ||||||||||||| || || ||||| || |||||| |||||||||| || ||||| |||| Sbjct: 439 ggctcaagggtgacccgacgtacctcgtcgtggaggccgacaagacgctggccacgtacg 498 Query: 479 ggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccg 529 ||||||||||||| |||||||| ||||| ||||||||||| |||||||||| Sbjct: 499 ggatcaacgccgtgtgcacgcaccttgggtgcgtcgtgccgtggaacgccg 549 Score = 115 bits (58), Expect = 2e-22 Identities = 105/120 (87%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 41 ccatggcctccaccgcgctctccaccgcctccaaccccacccagctctgccgaacccgtg 100 ||||||||||||||||||||||||||||||||||||| || ||||| ||| | | || | Sbjct: 52 ccatggcctccaccgcgctctccaccgcctccaaccctactcagctgtgcaggtctcgcg 111 Query: 101 cgagctcgctatgcaagcccgtcaagggcctgggcttcggccgggagcgcatcccgagga 160 | |||||| |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 112 c---ctcgctgggcaagcccgtcaagggcctgggcttcggccgggagcgcgtgccgagga 168
>gb|AF093631.1|AF093631 Oryza sativa Rieske Fe-S precursor protein (RISP) mRNA, complete cds Length = 919 Score = 347 bits (175), Expect = 2e-92 Identities = 307/351 (87%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| | || |||||||||||||||||| ||||| | |||||||||||||||| | Sbjct: 187 gcagcatcccggccgaccgcgtcccggacatgggcaagcgccagctgatgaacctcctcc 246 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 247 tgctcggcgccatctcgctccccaccgtcggcatgctcgtcccctacggcgccttcttca 306 Query: 299 tcccggccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacg 358 |||| ||||| ||||||| | || ||| ||| | ||||||||||||||||||||||| Sbjct: 307 tccccgccgggtccgggaacgccggcggcgggcaggtcgccaaggacaagctcggcaacg 366 Query: 359 acatcctcgtcgaggattggctcaagacgcacggccccaacgaccgcacgctcgcccagg 418 || | |||| |||||| ||||||||||| |||||||||||||||||||| ||| |||||| Sbjct: 367 acgtgctcgccgaggagtggctcaagacacacggccccaacgaccgcaccctcacccagg 426 Query: 419 ggctcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacg 478 ||||||||||||| || || ||||| || |||||| |||||||||| || ||||| |||| Sbjct: 427 ggctcaagggtgacccgacgtacctcgtcgtggaggccgacaagacgctggccacgtacg 486 Query: 479 ggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccg 529 ||||||||||||| |||||||| ||||| ||||||||||| |||||||||| Sbjct: 487 ggatcaacgccgtgtgcacgcaccttgggtgcgtcgtgccgtggaacgccg 537 Score = 115 bits (58), Expect = 2e-22 Identities = 105/120 (87%), Gaps = 3/120 (2%) Strand = Plus / Plus Query: 41 ccatggcctccaccgcgctctccaccgcctccaaccccacccagctctgccgaacccgtg 100 ||||||||||||||||||||||||||||||||||||| || ||||| ||| | | || | Sbjct: 40 ccatggcctccaccgcgctctccaccgcctccaaccctactcagctgtgcaggtctcgcg 99 Query: 101 cgagctcgctatgcaagcccgtcaagggcctgggcttcggccgggagcgcatcccgagga 160 | |||||| |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 100 c---ctcgctgggcaagcccgtcaagggcctgggcttcggccgggagcgcgtgccgagga 156
>gb|AY104934.1| Zea mays PCO071754 mRNA sequence Length = 1058 Score = 301 bits (152), Expect = 1e-78 Identities = 299/348 (85%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 ||||||||||||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 277 gcagcatctccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 336 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||| | |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 337 tcctcggcgccatctcgttgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 396 Query: 299 tcccggccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacg 358 |||| ||||||||||||| | || ||| ||| | ||||||||||||||| ||||||| Sbjct: 397 tccctgccggctccgggaacgccggcggcgggacctacgccaaggacaagctgggcaacg 456 Query: 359 acatcctcgtcgaggattggctcaagacgcacggccccaacgaccgcacgctcgcccagg 418 ||||| || ||||| |||||||| |||||||| |||||||||||||||||||| |||| Sbjct: 457 acatcacggtggaggagtggctcaacacgcacggtcccaacgaccgcacgctcgcgcagg 516 Query: 419 ggctcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacg 478 ||||||||||||| || || ||||| ||||||||| |||||||| || |||||||||| Sbjct: 517 ggctcaagggtgaccccacgtacctggtggtggagcaggacaagacgctggccacctacg 576 Query: 479 ggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacg 526 ||||||||||||| ||||| || || |||||||||||||| ||||||| Sbjct: 577 ggatcaacgccgtgtgcactcacctcggctgcgtcgtgccgtggaacg 624 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 55 gcgctctccaccgcctccaaccccacccagctct 88 ||||||||||||||| |||| ||||||||||||| Sbjct: 147 gcgctctccaccgccgccaatcccacccagctct 180
>gb|BT016255.1| Zea mays clone Contig88 mRNA sequence Length = 998 Score = 285 bits (144), Expect = 7e-74 Identities = 297/348 (85%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 ||||||||||||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 218 gcagcatctccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 277 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||| | |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 278 tcctcggcgccatctcgttgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 337 Query: 299 tcccggccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacg 358 |||| ||||||||||||| | || ||| ||| | ||||||||||||||| ||||||| Sbjct: 338 tccctgccggctccgggaacgccggcggcgggacctacgccaaggacaagctgggcaacg 397 Query: 359 acatcctcgtcgaggattggctcaagacgcacggccccaacgaccgcacgctcgcccagg 418 ||||| || |||| |||||||| |||||||| |||||||| ||||||||||| |||| Sbjct: 398 acatcacggtggaggcgtggctcaacacgcacggtcccaacgatcgcacgctcgcgcagg 457 Query: 419 ggctcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacg 478 ||||||||||||| || || ||||| ||||||||| |||||||| || |||||||||| Sbjct: 458 ggctcaagggtgaccccacgtacctggtggtggagcaggacaagacgctggccacctacg 517 Query: 479 ggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacg 526 ||||||||||||| ||||| || || |||||||||||||| ||||||| Sbjct: 518 ggatcaacgccgtgtgcactcacctcggctgcgtcgtgccgtggaacg 565 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 55 gcgctctccaccgcctccaaccccacccagctct 88 ||||||||||||||| |||| ||||||||||||| Sbjct: 88 gcgctctccaccgccgccaatcccacccagctct 121
>emb|AJ222783.1|HVJ222783 Hordeum vulgare mRNA for cytochrome b6/f-complex iron-sulfur like-protein, clone RG115 Length = 275 Score = 214 bits (108), Expect = 2e-52 Identities = 108/108 (100%) Strand = Plus / Plus Query: 422 tcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacggga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 tcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacggga 64 Query: 482 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccg 529 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccg 112
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 147 bits (74), Expect = 4e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| | || |||||||||||||||||| ||||| | |||||||||||||||| | Sbjct: 22132041 gcagcatcccggccgaccgcgtcccggacatgggcaagcgccagctgatgaacctcctcc 22132100 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 22132101 tgctcggcgccatctcgctccccaccgtcggcatgctcgtcccctacggcgccttcttca 22132160 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 22132161 tccccgccgg 22132170 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||||||||||||| | |||| |||||| ||||||||||| |||||||| Sbjct: 22132295 cgccaaggacaagctcggcaacgacgtgctcgccgaggagtggctcaagacacacggccc 22132354 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 |||||||||||| ||| ||||||||||||||| Sbjct: 22132355 caacgaccgcaccctcacccaggggctcaagg 22132386 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| || |||||| |||||||||| || ||||| |||||||||| Sbjct: 22132472 agggtgacccgacgtacctcgtcgtggaggccgacaagacgctggccacgtacgggatca 22132531 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccg 529 ||||||| |||||||| ||||| ||||||||||| |||||||||| Sbjct: 22132532 acgccgtgtgcacgcaccttgggtgcgtcgtgccgtggaacgccg 22132576 Score = 79.8 bits (40), Expect = 8e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 113 gcaagcccgtcaagggcctgggcttcggccgggagcgcatcccgagga 160 |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 22131963 gcaagcccgtcaagggcctgggcttcggccgggagcgcgtgccgagga 22132010 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 41 ccatggcctccaccgcgctctccaccgcctccaaccccacccagctctgc 90 ||||||||||||||||||||||||||||||||||||| || ||| ||||| Sbjct: 22130878 ccatggcctccaccgcgctctccaccgcctccaaccctactcaggtctgc 22130927
>dbj|AP005125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0058I18 Length = 151453 Score = 147 bits (74), Expect = 4e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| | || |||||||||||||||||| ||||| | |||||||||||||||| | Sbjct: 85697 gcagcatcccggccgaccgcgtcccggacatgggcaagcgccagctgatgaacctcctcc 85756 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 85757 tgctcggcgccatctcgctccccaccgtcggcatgctcgtcccctacggcgccttcttca 85816 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 85817 tccccgccgg 85826 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||||||||||||| | |||| |||||| ||||||||||| |||||||| Sbjct: 85951 cgccaaggacaagctcggcaacgacgtgctcgccgaggagtggctcaagacacacggccc 86010 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 |||||||||||| ||| ||||||||||||||| Sbjct: 86011 caacgaccgcaccctcacccaggggctcaagg 86042 Score = 105 bits (53), Expect = 1e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| || |||||| |||||||||| || ||||| |||||||||| Sbjct: 86128 agggtgacccgacgtacctcgtcgtggaggccgacaagacgctggccacgtacgggatca 86187 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccg 529 ||||||| |||||||| ||||| ||||||||||| |||||||||| Sbjct: 86188 acgccgtgtgcacgcaccttgggtgcgtcgtgccgtggaacgccg 86232 Score = 79.8 bits (40), Expect = 8e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 113 gcaagcccgtcaagggcctgggcttcggccgggagcgcatcccgagga 160 |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 85619 gcaagcccgtcaagggcctgggcttcggccgggagcgcgtgccgagga 85666 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 41 ccatggcctccaccgcgctctccaccgcctccaaccccacccagctctgc 90 ||||||||||||||||||||||||||||||||||||| || ||| ||||| Sbjct: 84534 ccatggcctccaccgcgctctccaccgcctccaaccctactcaggtctgc 84583
>gb|DQ427777.1| Sorghum propinquum locus HHU30 genomic sequence Length = 742 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 191 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 250 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 251 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 310 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 311 tccccgccgg 320 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 433 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 492 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 493 caacgaccgcacgctggcgcaggggctcaagg 524 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 646 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 705 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 706 acgccgtgtgcactcacctcggctgcgtcgtgcc 739
>gb|DQ427776.1| Sorghum bicolor voucher PI585454 locus HHU30 genomic sequence Length = 728 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 425 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 484 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 485 caacgaccgcacgctggcgcaggggctcaagg 516 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 632 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 691 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 692 acgccgtgtgcactcacctcggctgcgtcgtgcc 725
>gb|DQ427775.1| Sorghum bicolor voucher PI267539 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|DQ427774.1| Sorghum bicolor voucher PI267408 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|DQ427773.1| Sorghum bicolor voucher PI221607 locus HHU30 genomic sequence Length = 725 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 629 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 688 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 689 acgccgtgtgcactcacctcggctgcgtcgtgcc 722
>gb|DQ427772.1| Sorghum bicolor voucher PI152702 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|DQ427771.1| Sorghum bicolor voucher NSL92371 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|DQ427770.1| Sorghum bicolor voucher NSL87902 locus HHU30 genomic sequence Length = 728 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 425 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 484 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 485 caacgaccgcacgctggcgcaggggctcaagg 516 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 632 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 691 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 692 acgccgtgtgcactcacctcggctgcgtcgtgcc 725
>gb|DQ427769.1| Sorghum bicolor voucher NSL87666 locus HHU30 genomic sequence Length = 733 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 430 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 489 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 490 caacgaccgcacgctggcgcaggggctcaagg 521 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 637 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 696 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 697 acgccgtgtgcactcacctcggctgcgtcgtgcc 730
>gb|DQ427768.1| Sorghum bicolor voucher NSL77217 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|DQ427767.1| Sorghum bicolor voucher NSL77034 locus HHU30 genomic sequence Length = 723 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 181 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 240 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 241 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 300 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 301 tccccgccgg 310 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720
>gb|DQ427766.1| Sorghum bicolor voucher NSL56174 locus HHU30 genomic sequence Length = 723 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 181 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 240 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 241 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 300 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 301 tccccgccgg 310 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720
>gb|DQ427765.1| Sorghum bicolor voucher NSL56003 locus HHU30 genomic sequence Length = 723 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 181 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 240 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 241 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 300 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 301 tccccgccgg 310 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720
>gb|DQ427764.1| Sorghum bicolor voucher NSL55243 locus HHU30 genomic sequence Length = 723 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 181 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 240 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 241 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 300 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 301 tccccgccgg 310 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720
>gb|DQ427763.1| Sorghum bicolor voucher NSL51365 locus HHU30 genomic sequence Length = 723 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 181 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 240 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 241 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 300 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 301 tccccgccgg 310 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720
>gb|DQ427762.1| Sorghum bicolor voucher NSL51030 locus HHU30 genomic sequence Length = 728 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 425 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 484 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 485 caacgaccgcacgctggcgcaggggctcaagg 516 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 632 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 691 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 692 acgccgtgtgcactcacctcggctgcgtcgtgcc 725
>gb|DQ427761.1| Sorghum bicolor voucher NSL50875 locus HHU30 genomic sequence Length = 725 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 629 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 688 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 689 acgccgtgtgcactcacctcggctgcgtcgtgcc 722
>gb|DQ427760.1| Sorghum bicolor voucher BTx623 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 6e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 179 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 238 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 239 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 298 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 299 tcccggccgg 308 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 336 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 395 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 396 caacgaccgcacgctcgcccaggggctcaagg 427 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 5e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 425 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 484 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 485 acgccgtctgcacgcatcttggctgcgtcgtgcc 518 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|AY581830.1| Cynodon dactylon putative Rieske Fe-S precursor protein mRNA, partial cds Length = 511 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Plus Query: 381 caagacgcacggccccaacgaccgcacgctcgcccaggggctcaagggtgatcctaccta 440 |||||||||||||||||| |||||||||||| | ||||||||||||||||| || || || Sbjct: 1 caagacgcacggccccaaagaccgcacgctcacgcaggggctcaagggtgaccccacgta 60 Query: 441 ccttgtggtggagtccgacaagaccctcgccacctacgggatcaacgccgtctgcacgca 500 ||| || ||||| |||||||| || ||||||||||| |||||||| |||||||| || Sbjct: 61 cctggtcgtggacaaggacaagacgctggccacctacggcatcaacgcggtctgcaccca 120 Query: 501 tcttggctgcgtcgtgccttggaa 524 || || ||||||||||| ||||| Sbjct: 121 cctgggatgcgtcgtgccgtggaa 144
>gb|AY826845.1| Pavlova lutheri clone PLCB61 chloroplast cytochrome b6 mRNA, partial cds; nuclear gene for chloroplast product Length = 640 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 482 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccg 529 ||||||| ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 222 tcaacgcggtctgcacgcaccttggctgcgtcgtgccgtggaacgccg 269
>emb|X63605.1|PSPETC P.sativum petC mRNA for chloroplast Rieske FeS protein Length = 880 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 424 aagggtgatcctacctaccttgtggt 449 |||||||||||||||||||||||||| Sbjct: 443 aagggtgatcctacctaccttgtggt 468
>emb|AJ784853.1| Cyanophora paradoxa mRNA for Rieske iron-sulphur protein (petC-2 gene) Length = 874 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 484 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaac 525 |||||||||||||| || |||||||||||||| || |||||| Sbjct: 513 aacgccgtctgcactcaccttggctgcgtcgttccctggaac 554 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 399 cgaccgcacgctcgcccaggggctcaagggtgatcctacctacct 443 ||||||| ||||||||||||| |||||||| ||| | |||||||| Sbjct: 428 cgaccgctcgctcgcccagggcctcaagggcgatgccacctacct 472
>emb|AJ784852.1| Cyanophora paradoxa mRNA for Rieske iron-sulphur protein (petC-1 gene) Length = 864 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 482 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgc 527 |||||||||||||||| || ||||| |||||||| || |||||||| Sbjct: 527 tcaacgccgtctgcactcaccttgggtgcgtcgtcccgtggaacgc 572
>dbj|AB025003.1| Cicer arietinum mRNA for plastoquinol-plastocyanin reductase, partial cds Length = 479 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 424 aagggtgatcctacctaccttgtggtggag 453 ||||| |||||||||||||||||||||||| Sbjct: 213 aagggggatcctacctaccttgtggtggag 242
>gb|AY826843.1| Heterocapsa triquetra clone HTCB61 chloroplast cytochrome b6 mRNA, partial cds; nuclear gene for chloroplast product Length = 531 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 481 atcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaac 525 |||||||| |||||||| || || |||||||||||||| |||||| Sbjct: 170 atcaacgcggtctgcacccacctgggctgcgtcgtgccctggaac 214
>emb|X76299.1|CRPETC C.reinhardtii petC gene Length = 1608 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 484 aacgccgtctgcacgcatcttggctgcgtcgtgccttgg 522 |||||||| ||||| || || |||||||||||||||||| Sbjct: 921 aacgccgtgtgcactcacctgggctgcgtcgtgccttgg 959
>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7 Length = 349746 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 475 tacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaac 525 ||||| |||||||| ||||||| || || |||||||| |||||||||||| Sbjct: 12372 tacggaatcaacgcgatctgcacccacctcggctgcgtggtgccttggaac 12422
>gb|DQ122916.1| Chlamydomonas incerta chloroplast cytochrome B6/F complex rieske iron-sulfur protein (PetC) mRNA, partial cds; nuclear gene for chloroplast product Length = 1178 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 484 aacgccgtctgcacgcatcttggctgcgtcgtgccttgg 522 |||||||| ||||| || || |||||||||||||||||| Sbjct: 307 aacgccgtgtgcactcacctgggctgcgtcgtgccttgg 345
>dbj|D32003.1| Chlamydomonas reinhardtii mRNA for chloroplast Rieske Fe-S precursor protein, complete cds Length = 1436 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Plus Query: 484 aacgccgtctgcacgcatcttggctgcgtcgtgccttgg 522 |||||||| ||||| || || |||||||||||||||||| Sbjct: 440 aacgccgtgtgcactcacctgggctgcgtcgtgccttgg 478
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Plus Query: 474 ctacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgc 527 |||||| |||||||| || ||||| || | |||||||| |||||||||||||| Sbjct: 367618 ctacggcatcaacgcagtttgcacccacttgggctgcgtggtgccttggaacgc 367671
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 41 ccatggcctccaccgcgctctccaccgcct 70 ||||||| ||||||||||||||| |||||| Sbjct: 27035131 ccatggcttccaccgcgctctcctccgcct 27035160
>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 41 ccatggcctccaccgcgctctccaccgcct 70 ||||||| ||||||||||||||| |||||| Sbjct: 93962 ccatggcttccaccgcgctctcctccgcct 93991
>gb|AF010581.1|AF010581 Oryza sativa ribosomal protein L12 homolog mRNA, partial cds Length = 535 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 41 ccatggcctccaccgcgctctccaccgcct 70 ||||||| ||||||||||||||| |||||| Sbjct: 60 ccatggcttccaccgcgctctcctccgcct 89
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Minus Query: 474 ctacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgc 527 |||||| |||||||| || ||||| || | |||||||| |||||||||||||| Sbjct: 1253187 ctacggcatcaacgcagtttgcacccacttgggctgcgtggtgccttggaacgc 1253134
>dbj|AB022674.1| Oryza sativa (japonica cultivar-group) rpl12-2 gene for chloroplast ribosomal protein L12, complete cds Length = 2075 Score = 44.1 bits (22), Expect = 0.46 Identities = 28/30 (93%) Strand = Plus / Plus Query: 41 ccatggcctccaccgcgctctccaccgcct 70 ||||||| ||||||||||||||| |||||| Sbjct: 1177 ccatggcttccaccgcgctctcctccgcct 1206
>gb|AC093100.2| Drosophila melanogaster clone BACR05J04, complete sequence Length = 214621 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 tcgccgccaaggacaagctcggcaa 356 ||||||||||||||| ||||||||| Sbjct: 148155 tcgccgccaaggacacgctcggcaa 148179
>gb|AC124390.4| Mus musculus BAC clone RP24-434C11 from chromosome 12, complete sequence Length = 162663 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ctccaaccccacccagctctg 89 ||||||||||||||||||||| Sbjct: 300 ctccaaccccacccagctctg 280
>emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 on chromosome 20q12 Contains the MAFB gene for v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian), a novel gene and two CpG islands, complete sequence Length = 145593 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 gcctccaaccccacccagctctgcc 91 ||||||||||||||||||| ||||| Sbjct: 4928 gcctccaaccccacccagccctgcc 4904
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 ccaccatggcctccaccgcgc 58 ||||||||||||||||||||| Sbjct: 70817 ccaccatggcctccaccgcgc 70797
>gb|AC090377.15| Homo sapiens chromosome 18, clone RP11-866E20, complete sequence Length = 192704 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 atgaacctcctgctgctgggc 246 ||||||||||||||||||||| Sbjct: 142162 atgaacctcctgctgctgggc 142142
>gb|AC107990.5| Homo sapiens chromosome 18, clone RP11-103A19, complete sequence Length = 166109 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 atgaacctcctgctgctgggc 246 ||||||||||||||||||||| Sbjct: 25320 atgaacctcctgctgctgggc 25300
>ref|NM_135169.2| Drosophila melanogaster Pez CG9493-RA (Pez), mRNA Length = 4527 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 tcgccgccaaggacaagctcggcaa 356 ||||||||||||||| ||||||||| Sbjct: 1040 tcgccgccaaggacacgctcggcaa 1064
>gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome 12, complete sequence Length = 197420 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ctccaaccccacccagctctg 89 ||||||||||||||||||||| Sbjct: 104844 ctccaaccccacccagctctg 104864
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ccaccatggcctccaccgcgc 58 ||||||||||||||||||||| Sbjct: 11498346 ccaccatggcctccaccgcgc 11498366
>gb|AY826844.1| Isochrysis galbana clone ISCB61 chloroplast cytochrome b6 mRNA, partial cds; nuclear gene for chloroplast product Length = 1010 Score = 42.1 bits (21), Expect = 1.8 Identities = 57/69 (82%) Strand = Plus / Plus Query: 457 gacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgtg 516 ||||||||||||| | ||||| |||||||| || ||||| || || ||||||||||| Sbjct: 408 gacaagaccctcgagaactacgccatcaacgctgtttgcacccacctcggctgcgtcgtc 467 Query: 517 ccttggaac 525 || |||||| Sbjct: 468 ccatggaac 476
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 caccgcgctctccaccgcctc 71 ||||||||||||||||||||| Sbjct: 2450442 caccgcgctctccaccgcctc 2450462
>dbj|AP005836.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0013F08 Length = 166989 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ccaccatggcctccaccgcgc 58 ||||||||||||||||||||| Sbjct: 14353 ccaccatggcctccaccgcgc 14373
>dbj|AP006526.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0591A03 Length = 147043 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ccaccatggcctccaccgcgc 58 ||||||||||||||||||||| Sbjct: 132034 ccaccatggcctccaccgcgc 132054
>gb|AF217284.1|AF217284 Drosophila melanogaster protein tyrosine phosphatase Pez (Pez) mRNA, complete cds Length = 4433 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 332 tcgccgccaaggacaagctcggcaa 356 ||||||||||||||| ||||||||| Sbjct: 931 tcgccgccaaggacacgctcggcaa 955
>gb|AE003613.4| Drosophila melanogaster chromosome 2L, section 22 of 83 of the complete sequence Length = 280095 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 332 tcgccgccaaggacaagctcggcaa 356 ||||||||||||||| ||||||||| Sbjct: 119717 tcgccgccaaggacacgctcggcaa 119693
>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 Length = 407339 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 37 gccaccatggcctccaccgcgctctccaccgcc 69 |||||||| ||||||||||| ||||||||||| Sbjct: 198108 gccaccatcgcctccaccgccatctccaccgcc 198076 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 ccaccatggcctccaccgcgctctccaccgcc 69 ||||||| ||||||||||| ||||||||||| Sbjct: 309886 ccaccattgcctccaccgccatctccaccgcc 309917 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 ccaccatggcctccaccgcgctctccaccgcc 69 ||||||| ||||||||||| ||||||||||| Sbjct: 308332 ccaccattgcctccaccgccatctccaccgcc 308363 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 ccaccatggcctccaccgcgctctccaccgcc 69 ||||||| ||||||||||| ||||||||||| Sbjct: 308059 ccaccattgcctccaccgccatctccaccgcc 308090 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 ccaccatggcctccaccgcgctctccaccgcc 69 ||||||| ||||||||||| ||||||||||| Sbjct: 307855 ccaccattgcctccaccgccatctccaccgcc 307886 Score = 40.1 bits (20), Expect = 7.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 38 ccaccatggcctccaccgcgctctccaccgcc 69 ||||||| ||||||||||| ||||||||||| Sbjct: 307525 ccaccattgcctccaccgccatctccaccgcc 307556
>gb|AC005285.1|AC005285 Drosophila melanogaster DNA sequence (P1s DS00121 (D128), DS05470 (D270), and DS00108 (D120)), complete sequence Length = 209071 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 332 tcgccgccaaggacaagctcggcaa 356 ||||||||||||||| ||||||||| Sbjct: 133071 tcgccgccaaggacacgctcggcaa 133047
>emb|CT009609.1| Desulfococcus multivorans vrl island Length = 89210 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 ctgggcttcggccgggagcgcatcc 154 |||||||||| |||||||||||||| Sbjct: 5593 ctgggcttcgaccgggagcgcatcc 5569
>ref|XM_529565.1| PREDICTED: Pan troglodytes LOC452570 (LOC452570), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cacatgcatggccggcagca 184 |||||||||||||||||||| Sbjct: 1177 cacatgcatggccggcagca 1158
>ref|NM_192495.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 558 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 43 atggcctccaccgcgctctccaccgcct 70 ||||| ||||||||||||||| |||||| Sbjct: 1 atggcttccaccgcgctctcctccgcct 28
>ref|NM_018094.2| Homo sapiens G1 to S phase transition 2 (GSPT2), mRNA Length = 2503 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 tcccggccggctccgggagcaacg 322 |||||||||||||||| ||||||| Sbjct: 441 tcccggccggctccggcagcaacg 464
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 catggcctccaccgcgctctccac 65 |||||||||||| ||||||||||| Sbjct: 2843779 catggcctccacggcgctctccac 2843802 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 agcccgtcaagggcctgggc 135 |||||||||||||||||||| Sbjct: 1548385 agcccgtcaagggcctgggc 1548404
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 cgccgccaaggacaagctcg 352 |||||||||||||||||||| Sbjct: 1291073 cgccgccaaggacaagctcg 1291092
>gb|AC148476.4| Homo sapiens 12 BAC RP13-714J12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 41737 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 cctgctgctgggcgccatct 253 |||||||||||||||||||| Sbjct: 3763 cctgctgctgggcgccatct 3744
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 agggcctgggcttcggccgg 144 |||||||||||||||||||| Sbjct: 540974 agggcctgggcttcggccgg 540955
>gb|AC124358.4| Mus musculus BAC clone RP24-491B24 from chromosome 3, complete sequence Length = 161119 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 catgagcaagagggagctgatgaa 230 |||||||||||||||||| ||||| Sbjct: 31611 catgagcaagagggagcttatgaa 31588
>emb|AL929101.4| Human DNA sequence from clone RP11-22B10 on chromosome X Contains the GSPT2 gene for G1 to S phase transition 2, a pseudogene similar to part of p30 (nuclear protein p30), a zinc finger protein pseudogene, the 5' end of a variant of the MAGED1 gene for melanoma antigen, family D, 1 and two CpG islands, complete sequence Length = 157110 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 tcccggccggctccgggagcaacg 322 |||||||||||||||| ||||||| Sbjct: 40213 tcccggccggctccggcagcaacg 40236
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 agggcctgggcttcggccgg 144 |||||||||||||||||||| Sbjct: 671285 agggcctgggcttcggccgg 671266
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 ctccaccgcgctctccaccgcctc 71 ||||||||||||||||| |||||| Sbjct: 4778359 ctccaccgcgctctccagcgcctc 4778382
>emb|AL355861.19| Human DNA sequence from clone RP11-567J24 on chromosome 10 Contains the 5' end of a novel gene, the PRDX3 gene for peroxiredoxin 3 (AOP1, MER5, AOP-1, SP-22), the 5' end of the GPRK5 gene for G protein-coupled receptor kinase 5 (GRK5), a novel gene and four CpG islands, complete sequence Length = 168528 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccaccgcctccaaccccacc 81 |||||||||||||||||||| Sbjct: 162786 ccaccgcctccaaccccacc 162805
>ref|XM_783177.1| PREDICTED: Strongylocentrotus purpuratus similar to tripartite motif protein TRIM2 (LOC583257), mRNA Length = 1002 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 gacatcctcgtcgaggattg 377 |||||||||||||||||||| Sbjct: 757 gacatcctcgtcgaggattg 776
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gatgaacctcctgctgctgg 244 |||||||||||||||||||| Sbjct: 1354483 gatgaacctcctgctgctgg 1354502
>gb|BC036077.1| Homo sapiens G1 to S phase transition 2, mRNA (cDNA clone MGC:33729 IMAGE:5313878), complete cds Length = 2513 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 tcccggccggctccgggagcaacg 322 |||||||||||||||| ||||||| Sbjct: 441 tcccggccggctccggcagcaacg 464
>emb|AJ251548.1|HSA251548 Homo sapiens mRNA for polypeptide chain release factor 3b (GSPT2 gene) Length = 1887 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 tcccggccggctccgggagcaacg 322 |||||||||||||||| ||||||| Sbjct: 245 tcccggccggctccggcagcaacg 268
>emb|AL133055.1|HSM801326 Homo sapiens mRNA; cDNA DKFZp434J1015 (from clone DKFZp434J1015) Length = 1904 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 acctcctgctgctgggcgcc 249 |||||||||||||||||||| Sbjct: 255 acctcctgctgctgggcgcc 236
>emb|CR861342.1| Pongo pygmaeus mRNA; cDNA DKFZp459J1511 (from clone DKFZp459J1511) Length = 2532 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 tcccggccggctccgggagcaacg 322 |||||||||||||||| ||||||| Sbjct: 459 tcccggccggctccggcagcaacg 482
>gb|AC009004.6| Homo sapiens chromosome 19 clone LLNLR-291B11, complete sequence Length = 39608 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cctccaaccccacccagctc 87 |||||||||||||||||||| Sbjct: 1207 cctccaaccccacccagctc 1226
>gb|AE005819.1| Caulobacter crescentus CB15 section 145 of 359 of the complete genome Length = 10591 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 aggggtcgccgccaaggacaagct 350 |||||||| ||||||||||||||| Sbjct: 457 aggggtcggcgccaaggacaagct 434
>dbj|AK023155.1| Homo sapiens cDNA FLJ13093 fis, clone NT2RP3002151, highly similar to G1 TO S PHASE TRANSITION PROTEIN 1 HOMOLOG Length = 2492 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 tcccggccggctccgggagcaacg 322 |||||||||||||||| ||||||| Sbjct: 431 tcccggccggctccggcagcaacg 454
>dbj|AK001303.1| Homo sapiens cDNA FLJ10441 fis, clone NT2RP1000733, highly similar to Human mRNA for GSPT1-TK protein Length = 2481 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 299 tcccggccggctccgggagcaacg 322 |||||||||||||||| ||||||| Sbjct: 425 tcccggccggctccggcagcaacg 448
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 tcggcaacgacatcctcgtcgagg 373 |||||||||||||| ||||||||| Sbjct: 2955467 tcggcaacgacatcatcgtcgagg 2955444
>gb|AC024585.6| Homo sapiens chromosome 19 clone LLNLF-194E9, complete sequence Length = 26400 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cctccaaccccacccagctc 87 |||||||||||||||||||| Sbjct: 5912 cctccaaccccacccagctc 5893
>ref|XM_498167.2| PREDICTED: Homo sapiens hypothetical protein DKFZp434J1015 (DKFZp434J1015), mRNA Length = 4839 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 acctcctgctgctgggcgcc 249 |||||||||||||||||||| Sbjct: 104 acctcctgctgctgggcgcc 85
>gb|AC073343.6| Homo sapiens BAC clone RP11-611L7 from 7, complete sequence Length = 173967 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 acctcctgctgctgggcgcc 249 |||||||||||||||||||| Sbjct: 7430 acctcctgctgctgggcgcc 7411
>gb|AC157941.4| Mus musculus BAC clone RP24-253I2 from chromosome 3, complete sequence Length = 204323 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 catgagcaagagggagctgatgaa 230 |||||||||||||||||| ||||| Sbjct: 34488 catgagcaagagggagcttatgaa 34511
>gb|AC084658.1|CBRG46L07 Caenorhabditis briggsae cosmid G46L07, complete sequence Length = 35227 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gctcgctcgatcgtcctctc 20 |||||||||||||||||||| Sbjct: 14650 gctcgctcgatcgtcctctc 14631
>gb|AC055858.18| Homo sapiens chromosome 17, clone RP11-682M7, complete sequence Length = 167395 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 catgagcaagagggagctga 226 |||||||||||||||||||| Sbjct: 64910 catgagcaagagggagctga 64929
>gb|AE005063.1| Halobacterium sp. NRC-1 section 94 of 170 of the complete genome Length = 11844 Score = 40.1 bits (20), Expect = 7.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 388 cacggccccaacgaccgcacgctcgccc 415 |||| |||| |||||||||||||||||| Sbjct: 3212 cacgaccccgacgaccgcacgctcgccc 3239
>gb|AF203698.1|AF203698 Rattus norvegicus T calcium channel alpha1G subunit (Cacna1g) gene, partial cds Length = 4171 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 gcccaggggctcaagggtgatcct 435 |||||| ||||||||||||||||| Sbjct: 3845 gcccagaggctcaagggtgatcct 3868 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,287,095 Number of Sequences: 3902068 Number of extensions: 3287095 Number of successful extensions: 68875 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67778 Number of HSP's gapped (non-prelim): 1077 length of query: 529 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 506 effective length of database: 17,143,297,704 effective search space: 8674508638224 effective search space used: 8674508638224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
