Clone Information

BLAST Search Result

Clone Name	baal17j20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|AC022884.12\| Homo sapiens chromosome 18, clone RP11-449D8, co...	42	1.8
2	gb\|AC073856.17\| Homo sapiens 3 BAC RP11-938G16 (Roswell Park Can...	42	1.8
3	gb\|AF426173.1\| Cavia porcellus neurokinin 3 receptor (NK3R) mRNA...	42	1.8
4	gb\|AF255393.1\|AF255393 Cavia porcellus neurokinin B receptor (NK...	42	1.8
5	gb\|AF255392.1\|AF255392 Cavia porcellus neurokinin B receptor (NK...	42	1.8
6	gb\|M84605.1\|HUMOPIODRE Human putative opioid receptor mRNA, comp...	42	1.8
7	gb\|AC153357.4\| Mus musculus BAC clone RP24-124N8 from chromosome...	40	7.0
8	gb\|AC162122.3\| Colobus guereza clone CH272-461I5, complete sequence	40	7.0
9	ref\|XM_414665.1\| PREDICTED: Gallus gallus similar to transcripti...	40	7.0
10	gb\|AC138730.4\| Pongo pygmaeus clone CH253-348D22, complete sequence	40	7.0
11	gb\|AC123552.4\| Mus musculus chromosome 7 clone RP24-396I18, comp...	40	7.0
12	gb\|AC123537.3\| Macaca mulatta clone CH250-75G11, complete sequence	40	7.0
13	emb\|AL590866.9\| Human DNA sequence from clone RP11-356B3 on chro...	40	7.0
14	emb\|AL450312.10\| Human DNA sequence from clone RP11-138L24 on ch...	40	7.0
15	emb\|AL450343.4\| Human DNA sequence from clone RP11-152M12 on chr...	40	7.0
16	emb\|AL354774.17\| Human DNA sequence from clone RP11-67L17 on chr...	40	7.0
17	emb\|AL939121.1\|SCO939121 Streptomyces coelicolor A3(2) complete ...	40	7.0
18	gb\|AC010615.9\| Homo sapiens chromosome 19 clone CTD-2561J22, com...	40	7.0
19	gb\|AC117397.2\| Homo sapiens 3 BAC RP11-92D20 (Roswell Park Cance...	40	7.0
20	gb\|CP000240.1\| Synechococcus sp. JA-2-3B'a(2-13), complete genome	40	7.0
21	gb\|AC103584.15\| Bos taurus clone rp42-51p13, complete sequence	40	7.0
22	gb\|AC118139.3\| Homo sapiens BAC clone RP11-461K12 from 4, comple...	40	7.0
23	gb\|AC022889.8\| Homo sapiens chromosome 15, clone RP11-492D5, com...	40	7.0
24	gb\|AC104420.2\| Homo sapiens chromosome 15, clone RP11-945A13, co...	40	7.0
25	gb\|AC068397.6\| Homo sapiens chromosome 15, clone RP11-272D12, co...	40	7.0
26	gb\|AC182810.1\| Gasterosteus aculeatus clone VMRC28-119K03, compl...	40	7.0
27	gb\|AY525414.1\| Methylocystis sp. LW2 methylene tetrahydromethano...	40	7.0
28	gb\|DP000005.1\| Macaca mulatta target 1 genomic scaffold	40	7.0
29	gb\|AC158384.2\| Mus musculus BAC clone RP24-97I24 from chromosome...	40	7.0
30	gb\|AC154772.2\| Mus musculus BAC clone RP24-448H7 from chromosome...	40	7.0
31	dbj\|AP008216.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	7.0
32	gb\|DP000025.1\| Gorilla gorilla gorilla target 1 genomic scaffold	40	7.0
33	gb\|DP000026.1\| Pongo pygmaeus target 1 genomic scaffold	40	7.0
34	gb\|AC012508.10\| Homo sapiens BAC clone RP11-521O16 from 2, compl...	40	7.0
35	gb\|AC069145.5\|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094...	40	7.0
36	gb\|AC090963.32\| Mus musculus strain C57BL/6J chromosome 17 clone...	40	7.0
37	ref\|XM_219680.3\| PREDICTED: Rattus norvegicus family with sequen...	40	7.0
38	gb\|AC090652.32\| Mus musculus strain C57BL/6J chromosome 7 clone ...	40	7.0
39	gb\|AC064841.3\| Homo sapiens BAC clone CTD-2015A10 from 2, comple...	40	7.0
40	dbj\|AP006618.1\| Nocardia farcinica IFM 10152 DNA, complete genome	40	7.0
41	gb\|AC006196.3\|AC006196 Homo sapiens, clone hRPK.1_A_1, complete ...	40	7.0
42	emb\|BX537835.1\|HSM805929 Homo sapiens mRNA; cDNA DKFZp686K1836 (...	40	7.0
43	emb\|Z84492.2\|HSLUCA11 Human DNA sequence from clone XXcos-11 on ...	40	7.0
44	gb\|AE016959.3\| Oryza sativa (japonica cultivar-group) chromosome...	40	7.0
45	gb\|U12585.1\|CGU12585 Cricetinae gen. sp. beta-cell E-box transcr...	40	7.0

>gb|AC022884.12| Homo sapiens chromosome 18, clone RP11-449D8, complete sequence
          Length = 195139

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 249   ctccctgcctgctgcatgcca 269
             |||||||||||||||||||||
Sbjct: 85788 ctccctgcctgctgcatgcca 85808

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>gb|AC073856.17| Homo sapiens 3 BAC RP11-938G16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 177363

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 301   aaggagaagaaaaacaaaacctgaa 325
             |||||||||||||| ||||||||||
Sbjct: 38830 aaggagaagaaaaagaaaacctgaa 38806

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>gb|AF426173.1| Cavia porcellus neurokinin 3 receptor (NK3R) mRNA, complete cds
          Length = 1709

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 193 ccggcggcggccacccccagc 213
           |||||||||||||||||||||
Sbjct: 131 ccggcggcggccacccccagc 111

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>gb|AF255393.1|AF255393 Cavia porcellus neurokinin B receptor (NK3) mRNA, complete cds
          Length = 1550

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 193 ccggcggcggccacccccagc 213
           |||||||||||||||||||||
Sbjct: 126 ccggcggcggccacccccagc 106

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>gb|AF255392.1|AF255392 Cavia porcellus neurokinin B receptor (NK3) gene, exon 1 and
           partial cds
          Length = 1339

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 193 ccggcggcggccacccccagc 213
           |||||||||||||||||||||
Sbjct: 556 ccggcggcggccacccccagc 536

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>gb|M84605.1|HUMOPIODRE Human putative opioid receptor mRNA, complete cds
          Length = 4839

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 193 ccggcggcggccacccccagc 213
           |||||||||||||||||||||
Sbjct: 151 ccggcggcggccacccccagc 131

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>gb|AC153357.4| Mus musculus BAC clone RP24-124N8 from chromosome 10, complete sequence
          Length = 189789

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   aaggagaagaaaaacaaaac 320
             ||||||||||||||||||||
Sbjct: 35554 aaggagaagaaaaacaaaac 35535

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>gb|AC162122.3| Colobus guereza clone CH272-461I5, complete sequence
          Length = 192356

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    aagaaaaacaaaacctgaac 326
              ||||||||||||||||||||
Sbjct: 159356 aagaaaaacaaaacctgaac 159337

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>ref|XM_414665.1| PREDICTED: Gallus gallus similar to transcription elongation
            regulator 1; transcription factor CA150; TATA box binding
            protein (TBP)-associated factor, RNA polymerase II, S,
            150kD; TATA box-binding protein-associated factor 2S
            (LOC416349), mRNA
          Length = 3378

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 300  caaggagaagaaaaacaaaa 319
            ||||||||||||||||||||
Sbjct: 2235 caaggagaagaaaaacaaaa 2254

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>gb|AC138730.4| Pongo pygmaeus clone CH253-348D22, complete sequence
          Length = 203598

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    aagaaaaacaaaacctgaac 326
              ||||||||||||||||||||
Sbjct: 195442 aagaaaaacaaaacctgaac 195423

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>gb|AC123552.4| Mus musculus chromosome 7 clone RP24-396I18, complete sequence
          Length = 170951

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 89621 gctccctgcctgctgcatgc 89640



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 89574 gctccctgcctgctgcatgc 89593



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 89503 gctccctgcctgctgcatgc 89522



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 89456 gctccctgcctgctgcatgc 89475



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 89361 gctccctgcctgctgcatgc 89380



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 89338 gctccctgcctgctgcatgc 89357

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>gb|AC123537.3| Macaca mulatta clone CH250-75G11, complete sequence
          Length = 172942

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    aagaaaaacaaaacctgaac 326
              ||||||||||||||||||||
Sbjct: 113833 aagaaaaacaaaacctgaac 113814

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>emb|AL590866.9| Human DNA sequence from clone RP11-356B3 on chromosome 6, complete
             sequence
          Length = 76158

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ccaagctgctgctgcacatg 31
             ||||||||||||||||||||
Sbjct: 69028 ccaagctgctgctgcacatg 69047

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>emb|AL450312.10| Human DNA sequence from clone RP11-138L24 on chromosome 9, complete
              sequence
          Length = 164559

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    ctccctgcctgctgcatgcc 268
              ||||||||||||||||||||
Sbjct: 156041 ctccctgcctgctgcatgcc 156060

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>emb|AL450343.4| Human DNA sequence from clone RP11-152M12 on chromosome 6, complete
             sequence
          Length = 22205

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   aaggagaagaaaaacaaaac 320
             ||||||||||||||||||||
Sbjct: 17246 aaggagaagaaaaacaaaac 17265

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>emb|AL354774.17| Human DNA sequence from clone RP11-67L17 on chromosome 13, complete
             sequence
          Length = 125693

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   cagcatgccctggaagtgag 247
             ||||||||||||||||||||
Sbjct: 85109 cagcatgccctggaagtgag 85128

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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    accagggcgtcccggcggcg 201
              ||||||||||||||||||||
Sbjct: 190855 accagggcgtcccggcggcg 190836

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>gb|AC010615.9| Homo sapiens chromosome 19 clone CTD-2561J22, complete sequence
          Length = 215962

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 304    gagaagaaaaacaaaacctg 323
              ||||||||||||||||||||
Sbjct: 158519 gagaagaaaaacaaaacctg 158500

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>gb|AC117397.2| Homo sapiens 3 BAC RP11-92D20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128398

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   gaagaaaaacaaaacctgaa 325
             ||||||||||||||||||||
Sbjct: 71181 gaagaaaaacaaaacctgaa 71162

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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 37      gcatccgcgccaccgaagat 56
               ||||||||||||||||||||
Sbjct: 2771848 gcatccgcgccaccgaagat 2771829

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>gb|AC103584.15| Bos taurus clone rp42-51p13, complete sequence
          Length = 177017

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    tgccctggaagtgaggctcc 252
              ||||||||||||||||||||
Sbjct: 161544 tgccctggaagtgaggctcc 161563

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>gb|AC118139.3| Homo sapiens BAC clone RP11-461K12 from 4, complete sequence
          Length = 54171

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   cagcatgccctggaagtgag 247
             ||||||||||||||||||||
Sbjct: 39164 cagcatgccctggaagtgag 39145

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>gb|AC022889.8| Homo sapiens chromosome 15, clone RP11-492D5, complete sequence
          Length = 108652

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   aaggagaagaaaaacaaaac 320
             ||||||||||||||||||||
Sbjct: 74944 aaggagaagaaaaacaaaac 74925

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>gb|AC104420.2| Homo sapiens chromosome 15, clone RP11-945A13, complete sequence
          Length = 178756

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    aaggagaagaaaaacaaaac 320
              ||||||||||||||||||||
Sbjct: 177650 aaggagaagaaaaacaaaac 177631

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>gb|AC068397.6| Homo sapiens chromosome 15, clone RP11-272D12, complete sequence
          Length = 169892

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   aaggagaagaaaaacaaaac 320
             ||||||||||||||||||||
Sbjct: 55888 aaggagaagaaaaacaaaac 55869

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>gb|AC182810.1| Gasterosteus aculeatus clone VMRC28-119K03, complete sequence
          Length = 131913

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    gaaaaacaaaacctgaacta 328
              ||||||||||||||||||||
Sbjct: 122490 gaaaaacaaaacctgaacta 122471

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>gb|AY525414.1| Methylocystis sp. LW2 methylene tetrahydromethanopterin
           dehydrogenase (mtdB) gene, partial cds
          Length = 512

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 41  ccgcgccaccgaagatgacg 60
           ||||||||||||||||||||
Sbjct: 220 ccgcgccaccgaagatgacg 201

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>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold
          Length = 1678549

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 307     aagaaaaacaaaacctgaac 326
               ||||||||||||||||||||
Sbjct: 1550312 aagaaaaacaaaacctgaac 1550293

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>gb|AC158384.2| Mus musculus BAC clone RP24-97I24 from chromosome 9, complete sequence
          Length = 163817

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   ggtccagactgtttatttag 378
             ||||||||||||||||||||
Sbjct: 72721 ggtccagactgtttatttag 72702

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>gb|AC154772.2| Mus musculus BAC clone RP24-448H7 from chromosome 16, complete sequence
          Length = 169374

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 296   ctctcaaggagaagaaaaacaaaa 319
             |||||||||||||||||| |||||
Sbjct: 69138 ctctcaaggagaagaaaagcaaaa 69161

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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 248      gctccctgcctgctgcatgc 267
                ||||||||||||||||||||
Sbjct: 17042514 gctccctgcctgctgcatgc 17042533

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>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold
          Length = 1787293

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 307     aagaaaaacaaaacctgaac 326
               ||||||||||||||||||||
Sbjct: 1538463 aagaaaaacaaaacctgaac 1538444

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>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold
          Length = 1819346

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 307     aagaaaaacaaaacctgaac 326
               ||||||||||||||||||||
Sbjct: 1547831 aagaaaaacaaaacctgaac 1547812

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>gb|AC012508.10| Homo sapiens BAC clone RP11-521O16 from 2, complete sequence
          Length = 185967

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    ggcctgtccagcatgccctg 239
              ||||||||||||||||||||
Sbjct: 115869 ggcctgtccagcatgccctg 115888

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>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete
             sequence
          Length = 135216

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 83006 gctccctgcctgctgcatgc 83025

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>gb|AC090963.32| Mus musculus strain C57BL/6J chromosome 17 clone rp23-435j12, complete
             sequence
          Length = 218107

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 487   gataaatttatgaacctttt 506
             ||||||||||||||||||||
Sbjct: 45562 gataaatttatgaacctttt 45543

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>ref|XM_219680.3| PREDICTED: Rattus norvegicus family with sequence similarity 18,
            member B (predicted) (Fam18b_predicted), mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 210  cagcaacagcggcctgtcca 229
            ||||||||||||||||||||
Sbjct: 1191 cagcaacagcggcctgtcca 1172

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>gb|AC090652.32| Mus musculus strain C57BL/6J chromosome 7 clone rp23-116a10, complete
             sequence
          Length = 228147

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 98170 gctccctgcctgctgcatgc 98151



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 98147 gctccctgcctgctgcatgc 98128



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 98052 gctccctgcctgctgcatgc 98033



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 98005 gctccctgcctgctgcatgc 97986



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 97934 gctccctgcctgctgcatgc 97915



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   gctccctgcctgctgcatgc 267
             ||||||||||||||||||||
Sbjct: 97887 gctccctgcctgctgcatgc 97868

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>gb|AC064841.3| Homo sapiens BAC clone CTD-2015A10 from 2, complete sequence
          Length = 69829

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   agaactctcaaggagaagaa 311
             ||||||||||||||||||||
Sbjct: 60279 agaactctcaaggagaagaa 60298

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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 49      ccgaagatgacgccgagctt 68
               ||||||||||||||||||||
Sbjct: 2044783 ccgaagatgacgccgagctt 2044764

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>gb|AC006196.3|AC006196 Homo sapiens, clone hRPK.1_A_1, complete sequence
          Length = 181949

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    ggagaagaaaaacaaaacct 322
              ||||||||||||||||||||
Sbjct: 107027 ggagaagaaaaacaaaacct 107046

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>emb|BX537835.1|HSM805929 Homo sapiens mRNA; cDNA DKFZp686K1836 (from clone DKFZp686K1836)
          Length = 3468

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 304  gagaagaaaaacaaaacctg 323
            ||||||||||||||||||||
Sbjct: 3375 gagaagaaaaacaaaacctg 3356

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>emb|Z84492.2|HSLUCA11 Human DNA sequence from clone XXcos-11 on chromosome 3 Contains the 3'
             part of the gene for calcium channel, voltage-dependent, L
             type, alpha 2D subunit (KIAA0558) and the first exon of
             the gene for PL6 protein (deleted in Small Cell Lung
             Carcinoma). Contains ESTs, GSSs and a putative CpG island,
             complete sequence
          Length = 27844

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   tgaggctccctgcctgctgc 263
             ||||||||||||||||||||
Sbjct: 19281 tgaggctccctgcctgctgc 19262

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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 248      gctccctgcctgctgcatgc 267
                ||||||||||||||||||||
Sbjct: 17051554 gctccctgcctgctgcatgc 17051573

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>gb|U12585.1|CGU12585 Cricetinae gen. sp. beta-cell E-box transcription activator 1 (BETA1)
            mRNA, partial cds
          Length = 1640

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  aaggagaagaaaaacaaaac 320
            ||||||||||||||||||||
Sbjct: 1419 aaggagaagaaaaacaaaac 1438


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,618,030
Number of Sequences: 3902068
Number of extensions: 4618030
Number of successful extensions: 102417
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102054
Number of HSP's gapped (non-prelim): 363
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result