ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal17j08 |
|---|---|
| Clone Library Name | barley_pub |
>ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 67.8 bits (164), Expect(2) = 8e-13 Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 10/90 (11%) Frame = +2 Query: 83 ELYLRASELQKEGK---------RIIFTNVGNPHALGQKPLTXPRQVVALCQAPFLLDDP 235 E+ + A LQ++ + I++ N+GNP +LGQ+P+T R+V+ALC P LL+ Sbjct: 24 EIVIHAQHLQQQLQTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPCLLEKE 83 Query: 236 NVGLIFPADAIARAKHYLSLAPG-GLGAYS 322 +F ADAI+RAK LS PG GAYS Sbjct: 84 ETKSLFSADAISRAKQILSTIPGRATGAYS 113 Score = 23.1 bits (48), Expect(2) = 8e-13 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 Query: 34 EELNENVKKVQYAVRG 81 E LN V K +YAVRG Sbjct: 8 ENLNPKVLKCEYAVRG 23
>ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 68.2 bits (165), Expect(2) = 1e-12 Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 10/90 (11%) Frame = +2 Query: 83 ELYLRASELQKEGK---------RIIFTNVGNPHALGQKPLTXPRQVVALCQAPFLLDDP 235 E+ + A LQ++ K I++ N+GNP +LGQ+P+T R+V+ALC P LL Sbjct: 24 EIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQRE 83 Query: 236 NVGLIFPADAIARAKHYLSLAPG-GLGAYS 322 + +F AD+I+RAK L++ PG GAYS Sbjct: 84 EIKTLFSADSISRAKQILAMIPGRATGAYS 113 Score = 21.9 bits (45), Expect(2) = 1e-12 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +1 Query: 34 EELNENVKKVQYAVRG 81 + LN V K +YAVRG Sbjct: 8 DNLNPKVLKCEYAVRG 23
>ALAM_YEAST (P52893) Putative alanine aminotransferase, mitochondrial precursor| (EC 2.6.1.2) (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 592 Score = 56.2 bits (134), Expect(2) = 2e-11 Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 4/70 (5%) Frame = +2 Query: 125 RIIFTNVGNPHALGQKPLTXPRQVVALCQAPFLLDDPNVGLI----FPADAIARAKHYLS 292 RII N+GNP L QKPLT RQV++L Q P LL+ L+ F DAI RAK + Sbjct: 153 RIINANIGNPQQLQQKPLTYYRQVLSLLQYPELLNQNEQQLVDSKLFKLDAIKRAKSLME 212 Query: 293 LAPGGLGAYS 322 G +GAYS Sbjct: 213 DIGGSVGAYS 222 Score = 30.0 bits (66), Expect(2) = 2e-11 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +1 Query: 4 EMMGRKALDYEELNENVKKVQYAVRGRALPPR 99 E + L E++NENV K +YAVRG A+P R Sbjct: 104 EFYPAEQLTLEDVNENVLKAKYAVRG-AIPMR 134
>ALAT_SCHPO (Q10334) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 505 Score = 59.3 bits (142), Expect(2) = 2e-10 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 3/68 (4%) Frame = +2 Query: 128 IIFTNVGNPHALGQKPLTXPRQVVALCQAPFLLDDPN---VGLIFPADAIARAKHYLSLA 298 I++ N+GNP +GQ P+T RQV++LCQ P LLD +FP D + R+K L Sbjct: 71 IVYANIGNPQQMGQSPITFVRQVLSLCQYPTLLDHAEEKWFQNLFPTDVVQRSKMLLK-E 129 Query: 299 PGGLGAYS 322 G LGAYS Sbjct: 130 SGSLGAYS 137 Score = 23.5 bits (49), Expect(2) = 2e-10 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +1 Query: 28 DYEELNENVKKVQYAVRG 81 D LN+ V K YAVRG Sbjct: 29 DLNSLNQQVFKANYAVRG 46
>ALAT_HUMAN (P24298) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 57.0 bits (136), Expect(2) = 3e-10 Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 9/85 (10%) Frame = +2 Query: 95 RASELQKEGKR--------IIFTNVGNPHALGQKPLTXPRQVVALCQAPFLLDDPNVGLI 250 RA EL++E ++ +I N+G+ A+GQ+P+T RQV+ALC P LL PN Sbjct: 43 RALELEQELRQGVKKPFTEVIRANIGDAQAMGQRPITFLRQVLALCVNPDLLSSPN---- 98 Query: 251 FPADAIARAKHYLSLAPG-GLGAYS 322 FP DA RA+ L G LGAYS Sbjct: 99 FPDDAKKRAERILQACGGHSLGAYS 123 Score = 25.4 bits (54), Expect(2) = 3e-10 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +1 Query: 19 KALDYEELNENVKKVQYAVRG 81 K L + +N V++V+YAVRG Sbjct: 18 KVLTLDGMNPRVRRVEYAVRG 38
>ALAT_RAT (P25409) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 55.1 bits (131), Expect(2) = 2e-09 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 9/85 (10%) Frame = +2 Query: 95 RASELQKEGKR--------IIFTNVGNPHALGQKPLTXPRQVVALCQAPFLLDDPNVGLI 250 RA EL++E ++ +I N+G+ A+GQ+P+T RQV+ALC P LL P+ Sbjct: 43 RALELEQELRQGVKKPFTEVIRANIGDAQAMGQRPITFFRQVLALCVYPNLLSSPD---- 98 Query: 251 FPADAIARAKHYLSLAPG-GLGAYS 322 FP DA RA+ L G LGAYS Sbjct: 99 FPEDAKRRAERILQACGGHSLGAYS 123 Score = 24.6 bits (52), Expect(2) = 2e-09 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +1 Query: 19 KALDYEELNENVKKVQYAVRG 81 K L + +N V++V+YAVRG Sbjct: 18 KVLTLDTMNPCVRRVEYAVRG 38
>ALAT_MOUSE (Q8QZR5) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 55.1 bits (131), Expect(2) = 2e-09 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 9/85 (10%) Frame = +2 Query: 95 RASELQKEGKR--------IIFTNVGNPHALGQKPLTXPRQVVALCQAPFLLDDPNVGLI 250 RA EL++E ++ +I N+G+ A+GQ+P+T RQV+ALC P LL P+ Sbjct: 43 RALELEQELRQGVKKPFTEVIRANIGDAQAMGQRPITFFRQVLALCVYPNLLSSPD---- 98 Query: 251 FPADAIARAKHYLSLAPG-GLGAYS 322 FP DA RA+ L G LGAYS Sbjct: 99 FPEDAKRRAERILQACGGHSLGAYS 123 Score = 24.6 bits (52), Expect(2) = 2e-09 Identities = 10/21 (47%), Positives = 15/21 (71%) Frame = +1 Query: 19 KALDYEELNENVKKVQYAVRG 81 K L + +N V++V+YAVRG Sbjct: 18 KVLTLDTMNPCVRRVEYAVRG 38
>ALAT_YEAST (P52892) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 507 Score = 53.9 bits (128), Expect(2) = 3e-09 Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 13/89 (14%) Frame = +2 Query: 95 RASELQKEGKR---------IIFTNVGNPHALGQKPLTXPRQVVALCQAPFLLDDPNVGL 247 RA EL++E K+ II N+GNP L QKPLT RQV+A+ + P +L + L Sbjct: 49 RADELKEELKKNPEVLPFDDIINANIGNPQQLDQKPLTFTRQVLAILEYPEILRVGHNEL 108 Query: 248 ----IFPADAIARAKHYLSLAPGGLGAYS 322 +F DA+ RA+ L+ G +GAYS Sbjct: 109 ASLNLFSRDALERAERLLNDIGGSIGAYS 137 Score = 25.0 bits (53), Expect(2) = 3e-09 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 Query: 34 EELNENVKKVQYAVRGRALPPR 99 ++LN V K +YAVRG A+P R Sbjct: 29 KDLNTGVTKAEYAVRG-AIPTR 49
>CGPB_FUSSO (Q00858) Cutinase gene palindrome-binding protein (PBP)| Length = 457 Score = 34.7 bits (78), Expect = 0.062 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%) Frame = +2 Query: 110 QKEGKRIIFTNVGNPHALGQKPLTXPRQVVALCQAPFLLDDP----NVGLI 250 +K+GK IF VG+ H G K P CQA F++ P N GL+ Sbjct: 184 KKDGKFAIFETVGHAHIAGSKFAPNPNNQSPFCQAVFMMARPYPTKNAGLL 234
>SYR_SULAC (Q4J904) Arginyl-tRNA synthetase (EC 6.1.1.19) (Arginine--tRNA| ligase) (ArgRS) Length = 618 Score = 31.2 bits (69), Expect = 0.68 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +1 Query: 13 GRKALDYEELNENVKKVQYAVRGRALPPRIRAPEGG 120 G KAL+ E++NE +K++ +G LPP + G Sbjct: 323 GTKALELEDINEKIKEILNIPKGLKLPPLVLTRSDG 358
>RPOC_AQUAE (O67763) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1574 Score = 31.2 bits (69), Expect = 0.68 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -2 Query: 238 VGIIEEEGSLAERHHLAWXGEWLLSEGVRV 149 +GI++EEG L ERH + + L+ EG V Sbjct: 1096 IGIVDEEGRLLERHTIPYGARILVEEGQEV 1125
>WC2_NEUCR (P78714) White collar 2 protein (WC2)| Length = 530 Score = 30.4 bits (67), Expect = 1.2 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 4/51 (7%) Frame = +2 Query: 110 QKEGKRIIFTNVGNPHALGQKPLTXPRQVVALCQAPFLLDDP----NVGLI 250 +K+G IF VG+ H K P+ CQA F++ P N GL+ Sbjct: 243 KKDGNWTIFETVGHAHIAAAKFAPNPQNQSPFCQAVFMMARPYPTKNAGLL 293
>KLK1_MACFA (Q07276) Kallikrein-1 precursor (EC 3.4.21.35) (Tissue kallikrein)| (Kidney/pancreas/salivary gland kallikrein) Length = 257 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = -3 Query: 282 CLALAMASAGKMRPTLGSSRRKGAWQSATTWRGKVSGFCPRACG 151 CLAL++ G+ P SR G W+ + W+ + F CG Sbjct: 7 CLALSLGGTGRAPPI--QSRIVGGWECSQPWQAALYHFSTFQCG 48
>RPOC_AQUPY (Q9X6Y2) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1576 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -2 Query: 238 VGIIEEEGSLAERHHLAWXGEWLLSEGVRV 149 +G+++E+G L ERH + + L+ EG +V Sbjct: 1096 IGVLDEKGRLLERHTIPYGARLLVDEGQKV 1125
>RSE1_YARLI (Q6CAH5) Pre-mRNA-splicing factor RSE1| Length = 1143 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = +2 Query: 119 GKRIIF--TNVGNPHALGQKPLTXPRQVVALCQAPFLLDDPNVGLIFPADAIARAKHYLS 292 GK+++F ++G H + + P+ P + P D P L+F +AI H+++ Sbjct: 212 GKQLVFYELDLGLNHVIRKAPVDIPNSTSHVTAVPGGTDGPGGVLVFSTNAIV---HHVA 268 Query: 293 LAPGG 307 A GG Sbjct: 269 GAAGG 273
>KLK1_PAPHA (Q28773) Kallikrein-1 precursor (EC 3.4.21.35) (Tissue kallikrein)| (Kidney/pancreas/salivary gland kallikrein) Length = 258 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 282 CLALAMASAGKMRPTLGSSRRKGAWQSATTWRGKVSGFCPRACG 151 CLAL++ G P SR G W+ + W+ + F CG Sbjct: 7 CLALSLGGTGAAPPI--QSRIVGGWECSQPWQAALYHFSTFQCG 48
>NCF1_MOUSE (Q09014) Neutrophil cytosol factor 1 (NCF-1) (Neutrophil NADPH| oxidase factor 1) (47 kDa neutrophil oxidase factor) (p47-phox) (NCF-47K) Length = 390 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 19/62 (30%) Frame = +1 Query: 34 EELNENVKKVQYAVRGRALPPRIRAPEGGQEDH-------------------LHQRRQPA 156 ++ E + + Q +RGR PPR Q H L QRR+P Sbjct: 281 QKAGEEITQAQRQIRGRGAPPRRSTIRNAQSIHQRSRKRLSQDTYRRNSVRFLQQRRRPG 340 Query: 157 RP 162 RP Sbjct: 341 RP 342
>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)| Length = 1321 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +2 Query: 230 DPNVGLIFPADAIARAKHYLSLAPGGLG 313 D N GL+ PA A+ R ++L P GLG Sbjct: 178 DDNYGLVTPATAVYREVWQVNLKPKGLG 205
>GIDB_PROAC (Q6A5B2) Methyltransferase gidB (EC 2.1.-.-) (Glucose-inhibited| division protein B) Length = 208 Score = 27.3 bits (59), Expect = 9.8 Identities = 24/51 (47%), Positives = 27/51 (52%), Gaps = 8/51 (15%) Frame = -2 Query: 241 DVGII--EEEGSLAERHHLAWXG-EWLLSEGVRVADVGEDD-----PLALL 113 D G+I E G L ERH L E L+ EG RVADVG PLA+L Sbjct: 34 DWGLIGPREIGRLWERHILNSIALESLIPEGCRVADVGSGAGLPGIPLAIL 84
>LGRB_BREPA (Q70LM6) Linear gramicidin synthetase subunit B [Includes:| ATP-dependent alanine adenylase (AlaA) (Alanine activase); ATP-dependent D-leucine adenylase (D-LeuA) (D-leucine activase); Leucine racemase [ATP-hydrolyzing] (EC 5.1.1.-); ATP-depende Length = 5162 Score = 27.3 bits (59), Expect = 9.8 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 7 MMGRKALDYEELNENVKKVQYAVRGRALPP 96 +MG + L Y ELNE ++ +R R + P Sbjct: 479 VMGEQVLTYRELNEKANQLAKLLRARGIGP 508 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,907,422 Number of Sequences: 219361 Number of extensions: 639674 Number of successful extensions: 2478 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2415 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2476 length of database: 80,573,946 effective HSP length: 83 effective length of database: 62,366,983 effective search space used: 1496807592 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
