ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal17i12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY224493.1| Oryza sativa (japonica cultivar-group) isolate 30... 268 1e-68
2dbj|AK120907.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 3e-66
3ref|XM_464065.1| Oryza sativa (japonica cultivar-group), mRNA 196 3e-47
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
5dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
7dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
8dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
9ref|NM_101533.3| Arabidopsis thaliana oxidoreductase AT1G16720 m... 44 0.31
10gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L... 44 0.31
11gb|AY128723.1| Arabidopsis thaliana unknown protein (At1g16720) ... 44 0.31
12gb|AY062632.1| Arabidopsis thaliana Unknown protein (At1g16720; ... 44 0.31
13gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19... 44 0.31
14gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17... 44 0.31
15emb|AL157915.3|CNS01RGD Human chromosome 14 DNA sequence BAC R-6... 44 0.31
16emb|AL136294.4|CNS01DVY Human chromosome 14 DNA sequence BAC C-2... 44 0.31
17gb|AC115777.16| Mus musculus chromosome 6, clone RP23-139O6, com... 42 1.2
18gb|AC160090.4| Mus musculus 6 BAC RP23-322E20 (Roswell Park Canc... 42 1.2
19ref|NM_053922.1| Rattus norvegicus acetyl-Coenzyme A carboxylase... 40 4.8
20gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 4.8
21gb|DQ493871.1| Rattus norvegicus acetyl-Coenzyme A carboxylase 2... 40 4.8
22emb|X64533.1|LM23SRDNA L.monocytogenes 23S ribosomal DNA 40 4.8
23gb|AC138735.3| Gallus gallus clone TAM31-15F7, complete sequence 40 4.8
24emb|Y07639.1|LIINLC L.ivanovii 23S rRNA, 5S rRNA, tRNA-Asn, tRNA... 40 4.8
25gb|AC006454.4| Homo sapiens PAC clone RP5-852P6 from 7, complete... 40 4.8
26emb|AL591981.1| Listeria monocytogenes strain EGD, complete geno... 40 4.8
27emb|AL591980.1| Listeria monocytogenes strain EGD, complete geno... 40 4.8
28emb|AL591974.1| Listeria monocytogenes strain EGD, complete geno... 40 4.8
29emb|AL596173.1| Listeria innocua Clip11262 complete genome, segm... 40 4.8
30emb|AL596172.1| Listeria innocua Clip11262 complete genome, segm... 40 4.8
31emb|AL596170.1| Listeria innocua Clip11262 complete genome, segm... 40 4.8
32emb|AL596164.1| Listeria innocua Clip11262 complete genome, segm... 40 4.8
33gb|AC160141.2| Gallus gallus BAC clone CH261-182D6 from chromoso... 40 4.8
34gb|AF160963.1|AF160963 Listeria monocytogenes 23S ribosomal RNA ... 40 4.8
35gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 4.8
36emb|AL591983.1| Listeria monocytogenes strain EGD, complete geno... 40 4.8
37gb|AC159212.3| Gallus gallus BAC clone CH261-173O18 from chromos... 40 4.8
38gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete ge... 40 4.8
39emb|X68420.1|LM23SRRN L.monocytogenes gene for 23S rRNA 40 4.8
40emb|AL928895.5| Mouse DNA sequence from clone RP23-338J3 on chro... 40 4.8
41dbj|AB004329.1| Rattus norvegicus mRNA for acetyl-CoA carboxylas... 40 4.8 
>gb|AY224493.1| Oryza sativa (japonica cultivar-group) isolate 30868 unknown mRNA
          Length = 1503

 Score =  268 bits (135), Expect = 1e-68
 Identities = 288/338 (85%), Gaps = 1/338 (0%)
 Strand = Plus / Plus

                                                                       
Query: 18  ctttagttagtaagggacgatgccgaggtgatcgacatgcttcccaggtcggtggacatc 77
           |||||||||| |||| | ||||| || ||||| || ||||| || ||||||||||| || 
Sbjct: 281 ctttagttag-aaggaatgatgctgaagtgatagatatgctcccaaggtcggtggatatt 339

                                                                       
Query: 78  gctgttggcgatgttggcgatcctctggctgtgcaatcggccgtgtcaggctgcagcaag 137
           | ||| || |||||||| ||||||    ||||  ||||||| || ||||| |||||||||
Sbjct: 340 gttgtcggtgatgttggtgatccttcaactgtcaaatcggctgtatcaggttgcagcaag 399

                                                                       
Query: 138 attatctattgcgcaaccgcgcgctcaaccattaccggggacctcaacagagttgataac 197
           || |||||||||||||| || |||||||| ||||| || ||||| || || |||||||| 
Sbjct: 400 ataatctattgcgcaactgcacgctcaactattactggagacctaaatagggttgataat 459

                                                                       
Query: 198 caaggagtcaggaacgtcagcaaggctttccaggattactacaatgagatggctcagctc 257
           |||||||| ||||| || || ||||||||||||||||||||||||||  |||||||||| 
Sbjct: 460 caaggagtaaggaatgttagtaaggctttccaggattactacaatgaattggctcagctt 519

                                                                       
Query: 258 agggctggtaaaagcagcaagagcaagcttttgatagcaaaatttaaatccgccaagtct 317
           |||||||||||||||||||||||||| ||  |||||||||||||||||||  ||||||||
Sbjct: 520 agggctggtaaaagcagcaagagcaaactcctgatagcaaaatttaaatctcccaagtct 579

                                                 
Query: 318 ntgaagggttgggaggtgaaccagggatcttactttcc 355
            |||| |||||||||||| ||||||||||||| |||||
Sbjct: 580 ctgaatggttgggaggtggaccagggatcttattttcc 617
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>dbj|AK120907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031L08, full
            insert sequence
          Length = 2197

 Score =  260 bits (131), Expect = 3e-66
 Identities = 287/338 (84%), Gaps = 1/338 (0%)
 Strand = Plus / Plus

                                                                        
Query: 18   ctttagttagtaagggacgatgccgaggtgatcgacatgcttcccaggtcggtggacatc 77
            |||||||||| |||| | ||||| || ||||| || ||||| || ||||||||||| || 
Sbjct: 775  ctttagttag-aaggaatgatgctgaagtgatagatatgctcccaaggtcggtggatatt 833

                                                                        
Query: 78   gctgttggcgatgttggcgatcctctggctgtgcaatcggccgtgtcaggctgcagcaag 137
            | ||| || |||||||| ||||||    ||||  | ||||| || ||||| |||||||||
Sbjct: 834  gttgtcggtgatgttggtgatccttcaactgtcaagtcggctgtatcaggttgcagcaag 893

                                                                        
Query: 138  attatctattgcgcaaccgcgcgctcaaccattaccggggacctcaacagagttgataac 197
            || |||||||||||||| || |||||||| ||||| || ||||| || || |||||||| 
Sbjct: 894  ataatctattgcgcaactgcacgctcaactattactggagacctaaatagggttgataat 953

                                                                        
Query: 198  caaggagtcaggaacgtcagcaaggctttccaggattactacaatgagatggctcagctc 257
            |||||||| ||||| || || ||||||||||||||||||||||||||  |||||||||| 
Sbjct: 954  caaggagtaaggaatgttagtaaggctttccaggattactacaatgaattggctcagctt 1013

                                                                        
Query: 258  agggctggtaaaagcagcaagagcaagcttttgatagcaaaatttaaatccgccaagtct 317
            |||||||||||||||||||||||||| ||  |||||||||||||||||||  ||||||||
Sbjct: 1014 agggctggtaaaagcagcaagagcaaactcctgatagcaaaatttaaatctcccaagtct 1073

                                                  
Query: 318  ntgaagggttgggaggtgaaccagggatcttactttcc 355
             |||| |||||||||||| ||||||||||||| |||||
Sbjct: 1074 ctgaatggttgggaggtggaccagggatcttattttcc 1111
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>ref|XM_464065.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1797

 Score =  196 bits (99), Expect = 3e-47
 Identities = 257/310 (82%)
 Strand = Plus / Plus

                                                                       
Query: 45  gtgatcgacatgcttcccaggtcggtggacatcgctgttggcgatgttggcgatcctctg 104
           ||||||||||||||||| || || |||||||| |  ||||| |||||||||||| ||   
Sbjct: 601 gtgatcgacatgcttccaagatctgtggacattgtggttggtgatgttggcgatgcttct 660

                                                                       
Query: 105 gctgtgcaatcggccgtgtcaggctgcagcaagattatctattgcgcaaccgcgcgctca 164
            | || ||| | |||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 661 tcagttcaagctgccgtgtcaggctgcaacaaggtaatctactgcgcaactgcacggtca 720

                                                                       
Query: 165 accattaccggggacctcaacagagttgataaccaaggagtcaggaacgtcagcaaggct 224
           || |||||||| || ||||||||||||||||||||||| || ||||| |||| |||||| 
Sbjct: 721 acgattaccggtgatctcaacagagttgataaccaaggcgtgaggaatgtcaccaaggcc 780

                                                                       
Query: 225 ttccaggattactacaatgagatggctcagctcagggctggtaaaagcagcaagagcaag 284
           |||||||||||||||||| || ||||||||   |||||||||||||||||||||||||| 
Sbjct: 781 ttccaggattactacaatcagttggctcagtcaagggctggtaaaagcagcaagagcaaa 840

                                                                       
Query: 285 cttttgatagcaaaatttaaatccgccaagtctntgaagggttgggaggtgaaccaggga 344
           || | ||| || || || ||||| ||||| ||| |  | || ||||| ||||| ||||||
Sbjct: 841 ctgtcgattgccaagttcaaatctgccaaatctcttcaaggatgggaagtgaatcaggga 900

                     
Query: 345 tcttactttc 354
           || |||||||
Sbjct: 901 tcatactttc 910
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  161 bits (81), Expect = 2e-36
 Identities = 116/128 (90%)
 Strand = Plus / Minus

                                                                            
Query: 228      caggattactacaatgagatggctcagctcagggctggtaaaagcagcaagagcaagctt 287
                |||||||||||||||||  |||||||||| |||||||||||||||||||||||||| || 
Sbjct: 29249180 caggattactacaatgaattggctcagcttagggctggtaaaagcagcaagagcaaactc 29249121

                                                                            
Query: 288      ttgatagcaaaatttaaatccgccaagtctntgaagggttgggaggtgaaccagggatct 347
                 |||||||||||||||||||  |||||||| |||| |||||||||||| |||||||||||
Sbjct: 29249120 ctgatagcaaaatttaaatctcccaagtctctgaatggttgggaggtggaccagggatct 29249061

                        
Query: 348      tactttcc 355
                || |||||
Sbjct: 29249060 tattttcc 29249053



 Score =  115 bits (58), Expect = 1e-22
 Identities = 176/214 (82%), Gaps = 1/214 (0%)
 Strand = Plus / Minus

                                                                            
Query: 18       ctttagttagtaagggacgatgccgaggtgatcgacatgcttcccaggtcggtggacatc 77
                |||||||||| |||| | ||||| || ||||| || ||||| || ||||||||||| || 
Sbjct: 29249500 ctttagttag-aaggaatgatgctgaagtgatagatatgctcccaaggtcggtggatatt 29249442

                                                                            
Query: 78       gctgttggcgatgttggcgatcctctggctgtgcaatcggccgtgtcaggctgcagcaag 137
                | ||| || |||||||| ||||||    ||||  ||||||| || ||||| |||||||||
Sbjct: 29249441 gttgtcggtgatgttggtgatccttcaactgtcaaatcggctgtatcaggttgcagcaag 29249382

                                                                            
Query: 138      attatctattgcgcaaccgcgcgctcaaccattaccggggacctcaacagagttgataac 197
                || |||||||||||||| || |||||||| ||||| || ||||| || || |||||||| 
Sbjct: 29249381 ataatctattgcgcaactgcacgctcaactattactggagacctaaatagggttgataat 29249322

                                                  
Query: 198      caaggagtcaggaacgtcagcaaggctttccagg 231
                |||||||| ||||| || || |||||||||||||
Sbjct: 29249321 caaggagtaaggaatgttagtaaggctttccagg 29249288
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>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0018H04
          Length = 142053

 Score =  161 bits (81), Expect = 2e-36
 Identities = 116/128 (90%)
 Strand = Plus / Minus

                                                                         
Query: 228   caggattactacaatgagatggctcagctcagggctggtaaaagcagcaagagcaagctt 287
             |||||||||||||||||  |||||||||| |||||||||||||||||||||||||| || 
Sbjct: 11978 caggattactacaatgaattggctcagcttagggctggtaaaagcagcaagagcaaactc 11919

                                                                         
Query: 288   ttgatagcaaaatttaaatccgccaagtctntgaagggttgggaggtgaaccagggatct 347
              |||||||||||||||||||  |||||||| |||| |||||||||||| |||||||||||
Sbjct: 11918 ctgatagcaaaatttaaatctcccaagtctctgaatggttgggaggtggaccagggatct 11859

                     
Query: 348   tactttcc 355
             || |||||
Sbjct: 11858 tattttcc 11851



 Score =  115 bits (58), Expect = 1e-22
 Identities = 176/214 (82%), Gaps = 1/214 (0%)
 Strand = Plus / Minus

                                                                         
Query: 18    ctttagttagtaagggacgatgccgaggtgatcgacatgcttcccaggtcggtggacatc 77
             |||||||||| |||| | ||||| || ||||| || ||||| || ||||||||||| || 
Sbjct: 12298 ctttagttag-aaggaatgatgctgaagtgatagatatgctcccaaggtcggtggatatt 12240

                                                                         
Query: 78    gctgttggcgatgttggcgatcctctggctgtgcaatcggccgtgtcaggctgcagcaag 137
             | ||| || |||||||| ||||||    ||||  ||||||| || ||||| |||||||||
Sbjct: 12239 gttgtcggtgatgttggtgatccttcaactgtcaaatcggctgtatcaggttgcagcaag 12180

                                                                         
Query: 138   attatctattgcgcaaccgcgcgctcaaccattaccggggacctcaacagagttgataac 197
             || |||||||||||||| || |||||||| ||||| || ||||| || || |||||||| 
Sbjct: 12179 ataatctattgcgcaactgcacgctcaactattactggagacctaaatagggttgataat 12120

                                               
Query: 198   caaggagtcaggaacgtcagcaaggctttccagg 231
             |||||||| ||||| || || |||||||||||||
Sbjct: 12119 caaggagtaaggaatgttagtaaggctttccagg 12086
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  125 bits (63), Expect = 1e-25
 Identities = 156/187 (83%)
 Strand = Plus / Plus

                                                                           
Query: 45      gtgatcgacatgcttcccaggtcggtggacatcgctgttggcgatgttggcgatcctctg 104
               ||||||||||||||||| || || |||||||| |  ||||| |||||||||||| ||   
Sbjct: 2002848 gtgatcgacatgcttccaagatctgtggacattgtggttggtgatgttggcgatgcttct 2002907

                                                                           
Query: 105     gctgtgcaatcggccgtgtcaggctgcagcaagattatctattgcgcaaccgcgcgctca 164
                | || ||| | |||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 2002908 tcagttcaagctgccgtgtcaggctgcaacaaggtaatctactgcgcaactgcacggtca 2002967

                                                                           
Query: 165     accattaccggggacctcaacagagttgataaccaaggagtcaggaacgtcagcaaggct 224
               || |||||||| || ||||||||||||||||||||||| || ||||| |||| |||||| 
Sbjct: 2002968 acgattaccggtgatctcaacagagttgataaccaaggcgtgaggaatgtcaccaaggcc 2003027

                      
Query: 225     ttccagg 231
               |||||||
Sbjct: 2003028 ttccagg 2003034



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 105/127 (82%)
 Strand = Plus / Plus

                                                                           
Query: 228     caggattactacaatgagatggctcagctcagggctggtaaaagcagcaagagcaagctt 287
               ||||||||||||||| || ||||||||   |||||||||||||||||||||||||| || 
Sbjct: 2003126 caggattactacaatcagttggctcagtcaagggctggtaaaagcagcaagagcaaactg 2003185

                                                                           
Query: 288     ttgatagcaaaatttaaatccgccaagtctntgaagggttgggaggtgaaccagggatct 347
               | ||| || || || ||||| ||||| ||| |  | || ||||| ||||| |||||||| 
Sbjct: 2003186 tcgattgccaagttcaaatctgccaaatctcttcaaggatgggaagtgaatcagggatca 2003245

                      
Query: 348     tactttc 354
               |||||||
Sbjct: 2003246 tactttc 2003252
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>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0026E05
          Length = 159860

 Score =  125 bits (63), Expect = 1e-25
 Identities = 156/187 (83%)
 Strand = Plus / Plus

                                                                         
Query: 45    gtgatcgacatgcttcccaggtcggtggacatcgctgttggcgatgttggcgatcctctg 104
             ||||||||||||||||| || || |||||||| |  ||||| |||||||||||| ||   
Sbjct: 53056 gtgatcgacatgcttccaagatctgtggacattgtggttggtgatgttggcgatgcttct 53115

                                                                         
Query: 105   gctgtgcaatcggccgtgtcaggctgcagcaagattatctattgcgcaaccgcgcgctca 164
              | || ||| | |||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 53116 tcagttcaagctgccgtgtcaggctgcaacaaggtaatctactgcgcaactgcacggtca 53175

                                                                         
Query: 165   accattaccggggacctcaacagagttgataaccaaggagtcaggaacgtcagcaaggct 224
             || |||||||| || ||||||||||||||||||||||| || ||||| |||| |||||| 
Sbjct: 53176 acgattaccggtgatctcaacagagttgataaccaaggcgtgaggaatgtcaccaaggcc 53235

                    
Query: 225   ttccagg 231
             |||||||
Sbjct: 53236 ttccagg 53242



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 105/127 (82%)
 Strand = Plus / Plus

                                                                         
Query: 228   caggattactacaatgagatggctcagctcagggctggtaaaagcagcaagagcaagctt 287
             ||||||||||||||| || ||||||||   |||||||||||||||||||||||||| || 
Sbjct: 53334 caggattactacaatcagttggctcagtcaagggctggtaaaagcagcaagagcaaactg 53393

                                                                         
Query: 288   ttgatagcaaaatttaaatccgccaagtctntgaagggttgggaggtgaaccagggatct 347
             | ||| || || || ||||| ||||| ||| |  | || ||||| ||||| |||||||| 
Sbjct: 53394 tcgattgccaagttcaaatctgccaaatctcttcaaggatgggaagtgaatcagggatca 53453

                    
Query: 348   tactttc 354
             |||||||
Sbjct: 53454 tactttc 53460
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>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0081C13
          Length = 144624

 Score =  125 bits (63), Expect = 1e-25
 Identities = 156/187 (83%)
 Strand = Plus / Plus

                                                                          
Query: 45     gtgatcgacatgcttcccaggtcggtggacatcgctgttggcgatgttggcgatcctctg 104
              ||||||||||||||||| || || |||||||| |  ||||| |||||||||||| ||   
Sbjct: 142409 gtgatcgacatgcttccaagatctgtggacattgtggttggtgatgttggcgatgcttct 142468

                                                                          
Query: 105    gctgtgcaatcggccgtgtcaggctgcagcaagattatctattgcgcaaccgcgcgctca 164
               | || ||| | |||||||||||||||| |||| | ||||| |||||||| || || |||
Sbjct: 142469 tcagttcaagctgccgtgtcaggctgcaacaaggtaatctactgcgcaactgcacggtca 142528

                                                                          
Query: 165    accattaccggggacctcaacagagttgataaccaaggagtcaggaacgtcagcaaggct 224
              || |||||||| || ||||||||||||||||||||||| || ||||| |||| |||||| 
Sbjct: 142529 acgattaccggtgatctcaacagagttgataaccaaggcgtgaggaatgtcaccaaggcc 142588

                     
Query: 225    ttccagg 231
              |||||||
Sbjct: 142589 ttccagg 142595



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 105/127 (82%)
 Strand = Plus / Plus

                                                                          
Query: 228    caggattactacaatgagatggctcagctcagggctggtaaaagcagcaagagcaagctt 287
              ||||||||||||||| || ||||||||   |||||||||||||||||||||||||| || 
Sbjct: 142687 caggattactacaatcagttggctcagtcaagggctggtaaaagcagcaagagcaaactg 142746

                                                                          
Query: 288    ttgatagcaaaatttaaatccgccaagtctntgaagggttgggaggtgaaccagggatct 347
              | ||| || || || ||||| ||||| ||| |  | || ||||| ||||| |||||||| 
Sbjct: 142747 tcgattgccaagttcaaatctgccaaatctcttcaaggatgggaagtgaatcagggatca 142806

                     
Query: 348    tactttc 354
              |||||||
Sbjct: 142807 tactttc 142813
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>ref|NM_101533.3| Arabidopsis thaliana oxidoreductase AT1G16720 mRNA, complete cds
          Length = 2100

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 258 agggctggtaaaagcagcaagagcaagctt 287
           ||||| |||||||||||||| |||||||||
Sbjct: 884 agggcgggtaaaagcagcaaaagcaagctt 913
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>gb|DQ160197.1| Homo sapiens RAD51-like 1 (S. cerevisiae) (RAD51L1) gene, complete cds
          Length = 660392

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 284    gcttttgatagcaaaatttaaa 305
              ||||||||||||||||||||||
Sbjct: 429586 gcttttgatagcaaaatttaaa 429565
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>gb|AY128723.1| Arabidopsis thaliana unknown protein (At1g16720) mRNA, complete cds
          Length = 1863

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 258 agggctggtaaaagcagcaagagcaagctt 287
           ||||| |||||||||||||| |||||||||
Sbjct: 811 agggcgggtaaaagcagcaaaagcaagctt 840
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>gb|AY062632.1| Arabidopsis thaliana Unknown protein (At1g16720; F17F16.7) mRNA,
           complete cds
          Length = 2040

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 258 agggctggtaaaagcagcaagagcaagctt 287
           ||||| |||||||||||||| |||||||||
Sbjct: 884 agggcgggtaaaagcagcaaaagcaagctt 913
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>gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19K19 genomic sequence, complete
             sequence
          Length = 93485

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 258   agggctggtaaaagcagcaagagcaagctt 287
             ||||| |||||||||||||| |||||||||
Sbjct: 14493 agggcgggtaaaagcagcaaaagcaagctt 14464
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>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete
             sequence
          Length = 90498

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 258   agggctggtaaaagcagcaagagcaagctt 287
             ||||| |||||||||||||| |||||||||
Sbjct: 76770 agggcgggtaaaagcagcaaaagcaagctt 76741
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>emb|AL157915.3|CNS01RGD Human chromosome 14 DNA sequence BAC R-68M10 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 146002

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 284  gcttttgatagcaaaatttaaa 305
            ||||||||||||||||||||||
Sbjct: 3174 gcttttgatagcaaaatttaaa 3195
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>emb|AL136294.4|CNS01DVY Human chromosome 14 DNA sequence BAC C-2171B16 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 89290

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 284   gcttttgatagcaaaatttaaa 305
             ||||||||||||||||||||||
Sbjct: 49293 gcttttgatagcaaaatttaaa 49272
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>gb|AC115777.16| Mus musculus chromosome 6, clone RP23-139O6, complete sequence
          Length = 216399

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 276   aagagcaagcttttgatagcaaaat 300
             ||||| |||||||||||||||||||
Sbjct: 19777 aagagtaagcttttgatagcaaaat 19801
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>gb|AC160090.4| Mus musculus 6 BAC RP23-322E20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206093

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 276   aagagcaagcttttgatagcaaaat 300
             ||||| |||||||||||||||||||
Sbjct: 98405 aagagtaagcttttgatagcaaaat 98429
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>ref|NM_053922.1| Rattus norvegicus acetyl-Coenzyme A carboxylase beta (Acacb), mRNA
          Length = 7371

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 246  atggctcagctcagggctgg 265
            ||||||||||||||||||||
Sbjct: 7050 atggctcagctcagggctgg 7031
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 34      acgatgccgaggtgatcgac 53
               ||||||||||||||||||||
Sbjct: 2926615 acgatgccgaggtgatcgac 2926634
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>gb|DQ493871.1| Rattus norvegicus acetyl-Coenzyme A carboxylase 2 mRNA, complete cds
          Length = 7388

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 246  atggctcagctcagggctgg 265
            ||||||||||||||||||||
Sbjct: 7067 atggctcagctcagggctgg 7048
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>emb|X64533.1|LM23SRDNA L.monocytogenes 23S ribosomal DNA
          Length = 2928

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  cagggatcttactttccgaa 358
            ||||||||||||||||||||
Sbjct: 2842 cagggatcttactttccgaa 2823
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>gb|AC138735.3| Gallus gallus clone TAM31-15F7, complete sequence
          Length = 144409

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 251   tcagctcagggctggtaaaagcagcaag 278
             |||||||||||||||  |||||||||||
Sbjct: 84144 tcagctcagggctggccaaagcagcaag 84117
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>emb|Y07639.1|LIINLC L.ivanovii 23S rRNA, 5S rRNA, tRNA-Asn, tRNA-Thr, ORF Z, inlD, and
           inlC genes
          Length = 5380

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 339 cagggatcttactttccgaa 358
           ||||||||||||||||||||
Sbjct: 671 cagggatcttactttccgaa 652
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>gb|AC006454.4| Homo sapiens PAC clone RP5-852P6 from 7, complete sequence
          Length = 153203

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   ggttgggaggtgaaccaggg 343
             ||||||||||||||||||||
Sbjct: 37769 ggttgggaggtgaaccaggg 37750
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>emb|AL591981.1| Listeria monocytogenes strain EGD, complete genome, segment 9/12
          Length = 347050

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   cagggatcttactttccgaa 358
             ||||||||||||||||||||
Sbjct: 96096 cagggatcttactttccgaa 96115
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>emb|AL591980.1| Listeria monocytogenes strain EGD, complete genome, segment 8/12
          Length = 103050

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   cagggatcttactttccgaa 358
             ||||||||||||||||||||
Sbjct: 93175 cagggatcttactttccgaa 93194
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>emb|AL591974.1| Listeria monocytogenes strain EGD, complete genome, segment 2/12
          Length = 160050

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   cagggatcttactttccgaa 358
             ||||||||||||||||||||
Sbjct: 48132 cagggatcttactttccgaa 48113



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   cagggatcttactttccgaa 358
             ||||||||||||||||||||
Sbjct: 42111 cagggatcttactttccgaa 42092
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>emb|AL596173.1| Listeria innocua Clip11262 complete genome, segment 11/12
          Length = 305050

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    cagggatcttactttccgaa 358
              ||||||||||||||||||||
Sbjct: 148632 cagggatcttactttccgaa 148651
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>emb|AL596172.1| Listeria innocua Clip11262 complete genome, segment 10/12
          Length = 248050

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    cagggatcttactttccgaa 358
              ||||||||||||||||||||
Sbjct: 125637 cagggatcttactttccgaa 125656
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>emb|AL596170.1| Listeria innocua Clip11262 complete genome, segment 8/12
          Length = 313450

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    cagggatcttactttccgaa 358
              ||||||||||||||||||||
Sbjct: 113606 cagggatcttactttccgaa 113625



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 339  cagggatcttactttccgaa 358
            ||||||||||||||||||||
Sbjct: 3777 cagggatcttactttccgaa 3796
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>emb|AL596164.1| Listeria innocua Clip11262 complete genome, segment 2/12
          Length = 224650

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   cagggatcttactttccgaa 358
             ||||||||||||||||||||
Sbjct: 39795 cagggatcttactttccgaa 39776



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   cagggatcttactttccgaa 358
             ||||||||||||||||||||
Sbjct: 33773 cagggatcttactttccgaa 33754
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>gb|AC160141.2| Gallus gallus BAC clone CH261-182D6 from chromosome unknown, complete
              sequence
          Length = 240564

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 251    tcagctcagggctggtaaaagcagcaag 278
              |||||||||||||||  |||||||||||
Sbjct: 218302 tcagctcagggctggccaaagcagcaag 218275
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>gb|AF160963.1|AF160963 Listeria monocytogenes 23S ribosomal RNA gene, partial sequence;
           and 5S ribosomal RNA gene, complete sequence
          Length = 639

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 339 cagggatcttactttccgaa 358
           ||||||||||||||||||||
Sbjct: 317 cagggatcttactttccgaa 298
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 33      gacgatgccgaggtgatcga 52
               ||||||||||||||||||||
Sbjct: 1713940 gacgatgccgaggtgatcga 1713959
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>emb|AL591983.1| Listeria monocytogenes strain EGD, complete genome segment 11/12
          Length = 324050

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    cagggatcttactttccgaa 358
              ||||||||||||||||||||
Sbjct: 278125 cagggatcttactttccgaa 278144



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   cagggatcttactttccgaa 358
             ||||||||||||||||||||
Sbjct: 43116 cagggatcttactttccgaa 43135
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>gb|AC159212.3| Gallus gallus BAC clone CH261-173O18 from chromosome unknown, complete
              sequence
          Length = 236827

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 251    tcagctcagggctggtaaaagcagcaag 278
              |||||||||||||||  |||||||||||
Sbjct: 109920 tcagctcagggctggccaaagcagcaag 109947
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>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 339     cagggatcttactttccgaa 358
               ||||||||||||||||||||
Sbjct: 2621872 cagggatcttactttccgaa 2621891



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 339     cagggatcttactttccgaa 358
               ||||||||||||||||||||
Sbjct: 2391445 cagggatcttactttccgaa 2391464



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 339     cagggatcttactttccgaa 358
               ||||||||||||||||||||
Sbjct: 1828770 cagggatcttactttccgaa 1828789



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 339     cagggatcttactttccgaa 358
               ||||||||||||||||||||
Sbjct: 1724093 cagggatcttactttccgaa 1724112



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    cagggatcttactttccgaa 358
              ||||||||||||||||||||
Sbjct: 253393 cagggatcttactttccgaa 253374



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    cagggatcttactttccgaa 358
              ||||||||||||||||||||
Sbjct: 247374 cagggatcttactttccgaa 247355
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>emb|X68420.1|LM23SRRN L.monocytogenes gene for 23S rRNA
          Length = 2932

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  cagggatcttactttccgaa 358
            ||||||||||||||||||||
Sbjct: 2847 cagggatcttactttccgaa 2828
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>emb|AL928895.5| Mouse DNA sequence from clone RP23-338J3 on chromosome 2, complete
             sequence
          Length = 120507

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   tggtaaaagcagcaagagca 282
             ||||||||||||||||||||
Sbjct: 12009 tggtaaaagcagcaagagca 12028
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>dbj|AB004329.1| Rattus norvegicus mRNA for acetyl-CoA carboxylase, complete cds
          Length = 7371

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 246  atggctcagctcagggctgg 265
            ||||||||||||||||||||
Sbjct: 7050 atggctcagctcagggctgg 7031


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,823,720
Number of Sequences: 3902068
Number of extensions: 2823720
Number of successful extensions: 60383
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60216
Number of HSP's gapped (non-prelim): 164
length of query: 359
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 337
effective length of database: 17,147,199,772
effective search space: 5778606323164
effective search space used: 5778606323164
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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