>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  357 bits (917), Expect = 1e-98
 Identities = 176/177 (99%), Positives = 176/177 (99%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIADAPTNVQLPGMYNK ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 239 MVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 298

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN
Sbjct: 299 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 358

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA
Sbjct: 359 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 415

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  330 bits (845), Expect = 2e-90
 Identities = 156/177 (88%), Positives = 170/177 (96%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIADAPTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 236 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 295

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  G+EN
Sbjct: 296 REDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVEN 355

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           I KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG A
Sbjct: 356 ISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQA 412

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  325 bits (833), Expect = 5e-89
 Identities = 153/177 (86%), Positives = 169/177 (95%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 239 MVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 298

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           RDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG+EN
Sbjct: 299 RDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVEN 358

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           IGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDA
Sbjct: 359 IGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDA 415

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  319 bits (817), Expect = 4e-87
 Identities = 153/177 (86%), Positives = 169/177 (95%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 248 MVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 307

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TGIE 
Sbjct: 308 REDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIEL 367

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDA
Sbjct: 368 IGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDA 424

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  318 bits (815), Expect = 6e-87
 Identities = 149/177 (84%), Positives = 167/177 (94%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 249 MVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 308

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV   G++ 
Sbjct: 309 REDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDT 368

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDA
Sbjct: 369 IGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDA 425

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  318 bits (814), Expect = 8e-87
 Identities = 153/177 (86%), Positives = 167/177 (94%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 253 MVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 312

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV  TGIE 
Sbjct: 313 REDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEA 372

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDA
Sbjct: 373 IGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDA 429

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  317 bits (811), Expect = 2e-86
 Identities = 149/177 (84%), Positives = 168/177 (94%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 249 MVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 308

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+   G+++
Sbjct: 309 REDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDS 368

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDA
Sbjct: 369 IGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDA 425

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  315 bits (808), Expect = 4e-86
 Identities = 149/177 (84%), Positives = 166/177 (93%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 249 MVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 308

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV   G++ 
Sbjct: 309 REDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDT 368

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDA
Sbjct: 369 IGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDA 425

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  315 bits (806), Expect = 7e-86
 Identities = 147/177 (83%), Positives = 167/177 (94%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 245 MVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 304

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV  TG+EN
Sbjct: 305 REDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVEN 364

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           I ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+A
Sbjct: 365 IARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEA 421

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  311 bits (798), Expect = 6e-85
 Identities = 151/177 (85%), Positives = 162/177 (91%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 253 MVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 312

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV  TGIE 
Sbjct: 313 REDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEK 372

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDA
Sbjct: 373 IGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDA 429

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  306 bits (784), Expect = 3e-83
 Identities = 147/177 (83%), Positives = 162/177 (91%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNKEEN RVPI+ TGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 249 MVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPT 308

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+E 
Sbjct: 309 REDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEK 368

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDA
Sbjct: 369 IGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDA 425

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  305 bits (782), Expect = 4e-83
 Identities = 145/177 (81%), Positives = 162/177 (91%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNK++N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 247 MVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 306

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVC GIF+TD V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G++N
Sbjct: 307 REDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDN 366

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           +GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDA
Sbjct: 367 VGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDA 423

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  305 bits (780), Expect = 7e-83
 Identities = 141/177 (79%), Positives = 164/177 (92%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNKEEN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 251 MVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 310

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           RDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+   G++ 
Sbjct: 311 RDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDA 370

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
            GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+A
Sbjct: 371 TGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNA 427

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  295 bits (755), Expect = 6e-80
 Identities = 137/177 (77%), Positives = 162/177 (91%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNKE+N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT
Sbjct: 253 MVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 312

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVCKGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+   G+++
Sbjct: 313 REDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDS 372

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDA 554
           +GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+A
Sbjct: 373 VGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNA 429

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  284 bits (726), Expect = 1e-76
 Identities = 133/164 (81%), Positives = 149/164 (90%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRM+KFYWAPT
Sbjct: 246 MVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPT 305

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIG+C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW    G+E 
Sbjct: 306 REDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVER 365

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 515
           IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 366 IGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  246 bits (629), Expect = 2e-65
 Identities = 122/174 (70%), Positives = 139/174 (79%)
 Frame = +3

Query: 24  MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 203
           MVNATLMNIAD PTNVQLPG+Y  EE PRVPIV TGNDFSTLYAPLIRDGRMEK+YW PT
Sbjct: 222 MVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPT 281

Query: 204 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 383
           R+DRIGVC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+  TG++ 
Sbjct: 282 REDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDK 341

Query: 384 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 545
           IG++LVN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 342 IGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  206 bits (525), Expect = 3e-53
 Identities = 96/170 (56%), Positives = 125/170 (73%)
 Frame = +3

Query: 18  TXMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWA 197
           T +VNATLMNIAD PT+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRMEKFYW 
Sbjct: 120 TQLVNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWE 179

Query: 198 PTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 377
           P RD+++G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++   G 
Sbjct: 180 PHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGY 239

Query: 378 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 527
           EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 240 ENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  201 bits (512), Expect = 9e-52
 Identities = 95/170 (55%), Positives = 123/170 (72%)
 Frame = +3

Query: 18  TXMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWA 197
           T +VNATLMNIAD PT+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRMEKFYW 
Sbjct: 120 TQLVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWE 179

Query: 198 PTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGI 377
           P RDD++G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++   G 
Sbjct: 180 PNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGF 239

Query: 378 ENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 527
           E I  R+VNS + P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 240 ERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = +3

Query: 276 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 455
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 359 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 234
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +3

Query: 273 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 452
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 453 KLLEYGHMLVQEQDNVKRV 509
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 523 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 419
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 272 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 138
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGVPIKIIMEAI-QQASVAKKE 584

Query: 137 IV 132
           I+
Sbjct: 585 IL 586

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +3

Query: 357 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 464
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

>PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1)
          Length = 783

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 272 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 138
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 137 IV 132
           I+
Sbjct: 585 IL 586

>PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 272 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 138
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 137 IV 132
           I+
Sbjct: 585 IL 586

>PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 242 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 132
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369

>PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 242 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 132
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369

>RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP|
           alpha subunit) (Transcriptase alpha chain) (RNA
           polymerase alpha subunit)
          Length = 366

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/57 (26%), Positives = 32/57 (56%)
 Frame = +3

Query: 261 ESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFE 431
           + +V  V+T    S D   A+ ARV  D+++ ++GS  +E   ++ V+  +G + ++
Sbjct: 224 DRLVISVETDGSISPDEAVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYD 280

>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3|
          Length = 209

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 249 NVSDESVVKIVDTFP-GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 425
           NV DE  +K VDTF  G  +D  G  + + +   +++W  S G  + G +   +      
Sbjct: 92  NVGDE--IK-VDTFEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMGA 148

Query: 426 FEQPKMTVEKLLEYGHM 476
              P  T +     GHM
Sbjct: 149 ASDPSRTFKNKRMPGHM 165

>LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA|
          Length = 616

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
 Frame = -1

Query: 395 PLANVLDSGRADP------LAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDI---VG 243
           P+ N +D   ADP      LA LI   P      +V+G +  GVDDL DR+V +I   VG
Sbjct: 142 PVLNKIDLPAADPDKYAAELAGLIGGKPG--DVLRVSGKTGVGVDDLLDRVVQEIPAPVG 199

Query: 242 LEDTLA 225
             D  A
Sbjct: 200 AADAPA 205


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,823,091
Number of Sequences: 219361
Number of extensions: 1532434
Number of successful extensions: 5476
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 5161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5469
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)