ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal17h05 |
|---|---|
| Clone Library Name | barley_pub |
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)| Length = 291 Score = 136 bits (343), Expect = 3e-32 Identities = 66/82 (80%), Positives = 76/82 (92%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 FSEDL++FVGNLPFSVDSA LAGLFE+AG+VEMVEVIYDKLTGRSRGFGFVTMST EEVE Sbjct: 83 FSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVE 142 Query: 441 EAVERLNGYVLDGRALKVNSGP 506 A ++ NGY +DGRA++VN+GP Sbjct: 143 AAEQQFNGYEIDGRAIRVNAGP 164 Score = 80.5 bits (197), Expect = 2e-15 Identities = 38/75 (50%), Positives = 56/75 (74%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 RV+VGNL + VD L LF + G+V +V+YD+ +GRSRGFGFVT S+ +EV +A++ Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDS 267 Query: 456 LNGYVLDGRALKVNS 500 LNG LDGR+++V++ Sbjct: 268 LNGVDLDGRSIRVSA 282
>ROC2_NICPL (P49314) 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)| Length = 292 Score = 133 bits (335), Expect = 2e-31 Identities = 64/82 (78%), Positives = 76/82 (92%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 FSEDL++FVGNLPFSVDSA LAGLFE+AG+VE+VEVIYDKL+GRSRGFGFVTMST EEVE Sbjct: 84 FSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVE 143 Query: 441 EAVERLNGYVLDGRALKVNSGP 506 A ++ NGY +DGRA++VN+GP Sbjct: 144 AAEQQFNGYEIDGRAIRVNAGP 165 Score = 81.3 bits (199), Expect = 1e-15 Identities = 38/75 (50%), Positives = 56/75 (74%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 RV+VGNL + VD L LF + G+V +V+YD+ +GRSRGFGFVT S+ +EV +A++ Sbjct: 209 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDS 268 Query: 456 LNGYVLDGRALKVNS 500 LNG LDGR+++V++ Sbjct: 269 LNGIDLDGRSIRVSA 283
>ROC1_NICSY (Q08935) 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)| Length = 273 Score = 132 bits (331), Expect = 7e-31 Identities = 65/82 (79%), Positives = 73/82 (89%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 FS DL++FVGNLPFS DSA LA LFE+AG+VEMVEVIYDKLTGRSRGFGFVTMS+ EEVE Sbjct: 83 FSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVE 142 Query: 441 EAVERLNGYVLDGRALKVNSGP 506 A ++ NGY LDGRAL+VNSGP Sbjct: 143 AACQQFNGYELDGRALRVNSGP 164 Score = 80.5 bits (197), Expect = 2e-15 Identities = 40/79 (50%), Positives = 54/79 (68%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 F RV+VGNL + VD L LF + G V +V+YD+ +GRSRGFGFVT S+ EEV Sbjct: 184 FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVN 243 Query: 441 EAVERLNGYVLDGRALKVN 497 A+E L+G L+GRA++V+ Sbjct: 244 NAIESLDGVDLNGRAIRVS 262
>ROC1_ARATH (Q9ZUU4) Putative ribonucleoprotein At2g37220, chloroplast| precursor Length = 289 Score = 130 bits (327), Expect = 2e-30 Identities = 63/82 (76%), Positives = 73/82 (89%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 FS DL++FVGNLPF+VDSAQLA LFE AG+VEMVEVIYDK+TGRSRGFGFVTMS+V EVE Sbjct: 87 FSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVE 146 Query: 441 EAVERLNGYVLDGRALKVNSGP 506 A ++ NGY LDGR L+VN+GP Sbjct: 147 AAAQQFNGYELDGRPLRVNAGP 168 Score = 75.1 bits (183), Expect = 1e-13 Identities = 36/74 (48%), Positives = 51/74 (68%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 RV+VGNL + VD L LF + G V VIYD+ +GRS+GFGFVT + +EV+ A++ Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264 Query: 456 LNGYVLDGRALKVN 497 L+G LDGR ++V+ Sbjct: 265 LDGADLDGRQIRVS 278
>ROC1_NICPL (P49313) 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)| Length = 279 Score = 128 bits (321), Expect = 1e-29 Identities = 64/82 (78%), Positives = 72/82 (87%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 FS DL++FVGNL FS DSA LA LFE+AG+VEMVEVIYDKLTGRSRGFGFVTMS+ EEVE Sbjct: 83 FSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVE 142 Query: 441 EAVERLNGYVLDGRALKVNSGP 506 A ++ NGY LDGRAL+VNSGP Sbjct: 143 AACQQFNGYELDGRALRVNSGP 164 Score = 80.5 bits (197), Expect = 2e-15 Identities = 40/79 (50%), Positives = 54/79 (68%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 F RV+VGNL + VD L LF + G V +V+YD+ +GRSRGFGFVT S+ EEV Sbjct: 190 FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVN 249 Query: 441 EAVERLNGYVLDGRALKVN 497 A+E L+G L+GRA++V+ Sbjct: 250 NAIESLDGVDLNGRAIRVS 268
>ROC2_ARATH (Q43349) 29 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein cp29) Length = 342 Score = 123 bits (309), Expect = 2e-28 Identities = 60/82 (73%), Positives = 70/82 (85%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 FS DL++FVGNL F+VDSAQLA LFE AG+VEMVEVIYDK+TGRSRGFGFVTMST EVE Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154 Query: 441 EAVERLNGYVLDGRALKVNSGP 506 A ++ NGY +GR L+VN+GP Sbjct: 155 AAAQQFNGYEFEGRPLRVNAGP 176 Score = 78.6 bits (192), Expect = 9e-15 Identities = 37/74 (50%), Positives = 53/74 (71%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R++VGNL + VD L LF + G V VIYD+ +GRS+GFGFVT+S+ +EV++A+ Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317 Query: 456 LNGYVLDGRALKVN 497 LNG LDGR ++V+ Sbjct: 318 LNGADLDGRQIRVS 331
>ROC1_SPIOL (P28644) 28 kDa ribonucleoprotein, chloroplast (28RNP)| Length = 233 Score = 107 bits (267), Expect = 2e-23 Identities = 52/77 (67%), Positives = 64/77 (83%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E+ ++FVGNLP+ VDS +LAG+F+ AG VE+ EVIY++ T RSRGFGFVTMSTVEE E+A Sbjct: 53 EEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKA 112 Query: 447 VERLNGYVLDGRALKVN 497 VE LNGY +DGR L VN Sbjct: 113 VELLNGYDMDGRQLTVN 129 Score = 87.4 bits (215), Expect = 2e-17 Identities = 42/79 (53%), Positives = 56/79 (70%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 F RV+VGNLP+ VD+++L LF + G V V+ D+ TGRSRGFGFVTMS+ EV Sbjct: 145 FEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVN 204 Query: 441 EAVERLNGYVLDGRALKVN 497 +A+ L+G LDGRA++VN Sbjct: 205 DAIAALDGQTLDGRAVRVN 223
>ROC4_NICSY (P19683) 31 kDa ribonucleoprotein, chloroplast precursor| Length = 315 Score = 100 bits (248), Expect = 3e-21 Identities = 51/77 (66%), Positives = 61/77 (79%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 ED ++FVGNLP+ VDS LA LFEQAG VE+ EVIY++ T +SRGFGFVTMSTVEE E+A Sbjct: 134 EDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKA 193 Query: 447 VERLNGYVLDGRALKVN 497 VE N Y ++GR L VN Sbjct: 194 VEMYNRYDVNGRLLTVN 210 Score = 87.0 bits (214), Expect = 3e-17 Identities = 38/79 (48%), Positives = 56/79 (70%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 F + R++VGN+P+ +D A+L LF + G V V+YD+ TGRSRGFGFVTM++ E+ Sbjct: 226 FEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMS 285 Query: 441 EAVERLNGYVLDGRALKVN 497 +A+ L+G LDGR ++VN Sbjct: 286 DAIANLDGQSLDGRTIRVN 304
>ROC3_NICSY (P19682) 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)| Length = 276 Score = 99.8 bits (247), Expect = 4e-21 Identities = 50/78 (64%), Positives = 62/78 (79%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 SED ++FVGNLP+ +DS LA LF+QAG VE+ EVIY++ T RSRGFGFVTMSTVEE ++ Sbjct: 94 SEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADK 153 Query: 444 AVERLNGYVLDGRALKVN 497 AVE + Y L+GR L VN Sbjct: 154 AVELYSQYDLNGRLLTVN 171 Score = 84.7 bits (208), Expect = 1e-16 Identities = 37/80 (46%), Positives = 56/80 (70%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 F R++VGN+P+ +D A+L +F + G V V++D+ +GRSRGFGFVTMS+ E+ Sbjct: 187 FQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMS 246 Query: 441 EAVERLNGYVLDGRALKVNS 500 EA+ L+G LDGR ++VN+ Sbjct: 247 EAIANLDGQTLDGRTIRVNA 266
>ROC3_ARATH (Q04836) 31 kDa ribonucleoprotein, chloroplast precursor| (RNA-binding protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33) (RNA-binding protein cp31) Length = 329 Score = 95.9 bits (237), Expect = 6e-20 Identities = 48/78 (61%), Positives = 62/78 (79%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 SE+ ++FVGNL + V+S LA LFEQAG+VE+ EVIY++ T +SRGFGFVTMS+V+E E Sbjct: 147 SEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAET 206 Query: 444 AVERLNGYVLDGRALKVN 497 AVE+ N Y L+GR L VN Sbjct: 207 AVEKFNRYDLNGRLLTVN 224 Score = 89.0 bits (219), Expect = 7e-18 Identities = 42/74 (56%), Positives = 56/74 (75%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 RV+VGNLP+ VD+ +L LF + G V V+YD+ TGRSRGFGFVTMS V+E+ EA+ Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304 Query: 456 LNGYVLDGRALKVN 497 L+G L+GRA++VN Sbjct: 305 LDGQNLEGRAIRVN 318
>ROC5_NICSY (P19684) 33 kDa ribonucleoprotein, chloroplast precursor| Length = 324 Score = 88.2 bits (217), Expect = 1e-17 Identities = 40/74 (54%), Positives = 58/74 (78%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R++VGNLPFS+ S+QL+ +F +AG+V VE++YD++T RSRGF FVTM +VEE +EA+ Sbjct: 115 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 174 Query: 456 LNGYVLDGRALKVN 497 +G + GR +KVN Sbjct: 175 FDGSQVGGRTVKVN 188 Score = 60.1 bits (144), Expect = 3e-09 Identities = 28/74 (37%), Positives = 46/74 (62%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 +++V NL +++ S L F +VIYD+ +GRSRGFGF+T S+ E + A++ Sbjct: 218 KLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDT 277 Query: 456 LNGYVLDGRALKVN 497 +N L+GR L++N Sbjct: 278 MNEVELEGRPLRLN 291
>RRP2_SPIOL (P82277) Plastid-specific 30S ribosomal protein 2, chloroplast| precursor (PSRP-2) Length = 260 Score = 79.3 bits (194), Expect = 5e-15 Identities = 35/74 (47%), Positives = 55/74 (74%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R++VGN+P ++++ +L + E+ G++E+ EV+YDK +GRSR FGFVTM TVE+ +E+ Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEK 144 Query: 456 LNGYVLDGRALKVN 497 LN + GR +KVN Sbjct: 145 LNDTEIGGRKIKVN 158 Score = 58.5 bits (140), Expect = 1e-08 Identities = 30/74 (40%), Positives = 46/74 (62%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 +V++GNL +V + L F + G V +V T +S GFGFV+ S+ EEVE A++ Sbjct: 185 KVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQA 244 Query: 456 LNGYVLDGRALKVN 497 LN VL+G+ ++VN Sbjct: 245 LNNSVLEGQKIRVN 258
>RNPC2_MOUSE (Q8VH51) RNA-binding region-containing protein 2 (Coactivator of| activating protein 1 and estrogen receptors) (Coactivator of AP-1 and ERs) (Transcription coactivator CAPER) Length = 530 Score = 72.8 bits (177), Expect = 5e-13 Identities = 32/74 (43%), Positives = 53/74 (71%) Frame = +3 Query: 273 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 +R++VG+L F++ L G+FE G +E ++++ D TGRS+G+GF+T S E ++A+E Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 453 RLNGYVLDGRALKV 494 +LNG+ L GR +KV Sbjct: 310 QLNGFELAGRPMKV 323
>RNPC2_HUMAN (Q14498) RNA-binding region-containing protein 2 (Hepatocellular| carcinoma protein 1) (Splicing factor HCC1) Length = 530 Score = 72.8 bits (177), Expect = 5e-13 Identities = 32/74 (43%), Positives = 53/74 (71%) Frame = +3 Query: 273 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 +R++VG+L F++ L G+FE G +E ++++ D TGRS+G+GF+T S E ++A+E Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 309 Query: 453 RLNGYVLDGRALKV 494 +LNG+ L GR +KV Sbjct: 310 QLNGFELAGRPMKV 323
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 68.2 bits (165), Expect = 1e-11 Identities = 34/76 (44%), Positives = 48/76 (63%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 + R FVG L ++ D L F Q G V ++I D+ TGRSRGFGFVT + +++A+ Sbjct: 7 EYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 66 Query: 450 ERLNGYVLDGRALKVN 497 E +NG LDGR++ VN Sbjct: 67 EGMNGQDLDGRSITVN 82
>GRP2_SINAL (P49311) Glycine-rich RNA-binding protein GRP2A| Length = 169 Score = 67.8 bits (164), Expect = 2e-11 Identities = 33/76 (43%), Positives = 48/76 (63%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 + R FVG L ++ D L F Q G + ++I D+ TGRSRGFGFVT + +++A+ Sbjct: 7 EYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 66 Query: 450 ERLNGYVLDGRALKVN 497 E +NG LDGR++ VN Sbjct: 67 EGMNGQDLDGRSITVN 82
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 67.8 bits (164), Expect = 2e-11 Identities = 33/76 (43%), Positives = 48/76 (63%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 + R FVG L ++ A+L F Q G V ++I D+ TGRSRGFGFVT + +++A+ Sbjct: 5 EYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAI 64 Query: 450 ERLNGYVLDGRALKVN 497 + +NG LDGR + VN Sbjct: 65 DEMNGKELDGRTITVN 80
>RBM23_HUMAN (Q86U06) Probable RNA-binding protein 23 (RNA-binding motif protein| 23) (RNA-binding region-containing protein 4) (Splicing factor SF2) Length = 439 Score = 67.4 bits (163), Expect = 2e-11 Identities = 30/74 (40%), Positives = 50/74 (67%) Frame = +3 Query: 273 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 +R++VG+L F++ L G+FE G ++ + ++ D TGRS+G+GF+T S E A+E Sbjct: 263 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 322 Query: 453 RLNGYVLDGRALKV 494 +LNG+ L GR ++V Sbjct: 323 QLNGFELAGRPMRV 336
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 67.4 bits (163), Expect = 2e-11 Identities = 34/76 (44%), Positives = 48/76 (63%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 + R FVG L ++ D L F Q G V ++I D+ TGRSRGFGFVT + +++A+ Sbjct: 7 EYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAI 66 Query: 450 ERLNGYVLDGRALKVN 497 E +NG LDGR++ VN Sbjct: 67 EGMNGQDLDGRSITVN 82
>GRP1_DAUCA (Q03878) Glycine-rich RNA-binding protein| Length = 157 Score = 65.9 bits (159), Expect = 6e-11 Identities = 32/76 (42%), Positives = 46/76 (60%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 + R FVG L ++ + L F Q G + ++I D+ TGRSRGFGFVT + + +A+ Sbjct: 5 EYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAI 64 Query: 450 ERLNGYVLDGRALKVN 497 E +NG LDGR + VN Sbjct: 65 EGMNGQELDGRNITVN 80
>GRP2_SORBI (Q99070) Glycine-rich RNA-binding protein 2| Length = 168 Score = 65.5 bits (158), Expect = 8e-11 Identities = 34/76 (44%), Positives = 48/76 (63%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 + R FVG L ++ ++ L F G V +VI D+ TGRSRGFGFVT S+ + + +A+ Sbjct: 7 EYRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAI 66 Query: 450 ERLNGYVLDGRALKVN 497 E +NG LDGR + VN Sbjct: 67 ENMNGKELDGRNITVN 82
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 65.5 bits (158), Expect = 8e-11 Identities = 32/78 (41%), Positives = 47/78 (60%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 SE+ ++FVG L F+ D L F G + V V+ D+ T RSRGFGF+T + E + Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASD 62 Query: 444 AVERLNGYVLDGRALKVN 497 A+ +NG LDGR ++V+ Sbjct: 63 AMRAMNGESLDGRQIRVD 80
>GRPA_MAIZE (P10979) Glycine-rich RNA-binding, abscisic acid-inducible protein| Length = 157 Score = 65.1 bits (157), Expect = 1e-10 Identities = 33/76 (43%), Positives = 46/76 (60%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 + R FVG L ++ + L F G + +VI D+ TGRSRGFGFVT S+ + +A+ Sbjct: 7 EYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAI 66 Query: 450 ERLNGYVLDGRALKVN 497 E +NG LDGR + VN Sbjct: 67 ENMNGKELDGRNITVN 82
>CIRBP_PONPY (Q5RF83) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) Length = 172 Score = 64.7 bits (156), Expect = 1e-10 Identities = 29/78 (37%), Positives = 50/78 (64%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S++ ++FVG L F + L +F + G + V V+ D+ T RSRGFGFVT +++ ++ Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 444 AVERLNGYVLDGRALKVN 497 A+ +NG +DGR ++V+ Sbjct: 63 AMMAMNGKSVDGRQIRVD 80
>CIRBP_HUMAN (Q14011) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 64.7 bits (156), Expect = 1e-10 Identities = 29/78 (37%), Positives = 50/78 (64%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S++ ++FVG L F + L +F + G + V V+ D+ T RSRGFGFVT +++ ++ Sbjct: 3 SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 444 AVERLNGYVLDGRALKVN 497 A+ +NG +DGR ++V+ Sbjct: 63 AMMAMNGKSVDGRQIRVD 80
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 64.7 bits (156), Expect = 1e-10 Identities = 32/76 (42%), Positives = 46/76 (60%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 + R FVG L ++ + L F Q G V ++I D+ +GRSRGFGFVT + + +A+ Sbjct: 5 EYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAI 64 Query: 450 ERLNGYVLDGRALKVN 497 E +NG LDGR + VN Sbjct: 65 EEMNGKELDGRVITVN 80
>CIRBP_RAT (P60825) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 64.3 bits (155), Expect = 2e-10 Identities = 29/78 (37%), Positives = 50/78 (64%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S++ ++FVG L F + L +F + G + V V+ D+ T RSRGFGFVT +++ ++ Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 444 AVERLNGYVLDGRALKVN 497 A+ +NG +DGR ++V+ Sbjct: 63 AMMAMNGKSVDGRQIRVD 80
>CIRBP_MOUSE (P60824) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 64.3 bits (155), Expect = 2e-10 Identities = 29/78 (37%), Positives = 50/78 (64%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S++ ++FVG L F + L +F + G + V V+ D+ T RSRGFGFVT +++ ++ Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 444 AVERLNGYVLDGRALKVN 497 A+ +NG +DGR ++V+ Sbjct: 63 AMMAMNGKSVDGRQIRVD 80
>CIRBP_CRIGR (P60826) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (A18 hnRNP) Length = 172 Score = 64.3 bits (155), Expect = 2e-10 Identities = 29/78 (37%), Positives = 50/78 (64%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S++ ++FVG L F + L +F + G + V V+ D+ T RSRGFGFVT +++ ++ Sbjct: 3 SDEGKLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKD 62 Query: 444 AVERLNGYVLDGRALKVN 497 A+ +NG +DGR ++V+ Sbjct: 63 AMMAMNGKSVDGRQIRVD 80
>RBPA_SYNY3 (Q57014) Putative RNA-binding protein rbpA| Length = 101 Score = 64.3 bits (155), Expect = 2e-10 Identities = 33/75 (44%), Positives = 46/75 (61%) Frame = +3 Query: 273 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 + ++VGNL + V A L +F + GSV+ V++ D+ TGR RGFGFV + E A+E Sbjct: 1 MSIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIE 60 Query: 453 RLNGYVLDGRALKVN 497 L+G GR LKVN Sbjct: 61 ALDGAEWMGRDLKVN 75
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 63.9 bits (154), Expect = 2e-10 Identities = 32/78 (41%), Positives = 46/78 (58%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 SE+ ++FVG L F+ D L F G + V V+ D+ T RSRGFGF+T + E Sbjct: 3 SEEGKLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASV 62 Query: 444 AVERLNGYVLDGRALKVN 497 A+ +NG LDGR ++V+ Sbjct: 63 AMRAMNGESLDGRQIRVD 80
>CSTFT_HUMAN (Q9H0L4) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 616 Score = 63.5 bits (153), Expect = 3e-10 Identities = 29/74 (39%), Positives = 43/74 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFVGN+P+ QL +F + GSV ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 459 NGYVLDGRALKVNS 500 NG GRAL+V++ Sbjct: 78 NGREFSGRALRVDN 91
>CSTFT_MOUSE (Q8C7E9) Cleavage stimulation factor, 64 kDa subunit, tau variant| (CSTF 64 kDa subunit, tau variant) (CF-1 64 kDa subunit, tau variant) (TauCstF-64) Length = 632 Score = 63.5 bits (153), Expect = 3e-10 Identities = 29/74 (39%), Positives = 43/74 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFVGN+P+ QL +F + GSV ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 459 NGYVLDGRALKVNS 500 NG GRAL+V++ Sbjct: 78 NGREFSGRALRVDN 91
>CSTF2_BOVIN (Q8HXM1) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 572 Score = 61.6 bits (148), Expect = 1e-09 Identities = 28/74 (37%), Positives = 42/74 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 459 NGYVLDGRALKVNS 500 NG GRAL+V++ Sbjct: 78 NGREFSGRALRVDN 91
>CSTF2_PONPY (Q5RDA3) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 61.6 bits (148), Expect = 1e-09 Identities = 28/74 (37%), Positives = 42/74 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 459 NGYVLDGRALKVNS 500 NG GRAL+V++ Sbjct: 78 NGREFSGRALRVDN 91
>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 580 Score = 61.6 bits (148), Expect = 1e-09 Identities = 28/74 (37%), Positives = 42/74 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 459 NGYVLDGRALKVNS 500 NG GRAL+V++ Sbjct: 78 NGREFSGRALRVDN 91
>CSTF2_HUMAN (P33240) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa| subunit) (CF-1 64 kDa subunit) (CstF-64) Length = 577 Score = 61.6 bits (148), Expect = 1e-09 Identities = 28/74 (37%), Positives = 42/74 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFVGN+P+ QL +F + G V ++YD+ TG+ +G+GF E A+ L Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 459 NGYVLDGRALKVNS 500 NG GRAL+V++ Sbjct: 78 NGREFSGRALRVDN 91
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 61.2 bits (147), Expect = 2e-09 Identities = 29/78 (37%), Positives = 49/78 (62%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S++ ++F+G L F + L F + G + V V+ D+ T RSRGFGFVT V++ ++ Sbjct: 2 SDEGKLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKD 61 Query: 444 AVERLNGYVLDGRALKVN 497 A+ +NG +DGR ++V+ Sbjct: 62 AMMAMNGKSVDGRQIRVD 79
>RNPC1_HUMAN (Q9H0Z9) RNA-binding region-containing protein 1 (HSRNASEB) (ssDNA| binding protein SEB4) (CLL-associated antigen KW-5) Length = 216 Score = 60.1 bits (144), Expect = 3e-09 Identities = 32/74 (43%), Positives = 43/74 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FVG LP+ A L FE G +E VI D+ TG+SRG+GFVTM+ E A + Sbjct: 12 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKD 71 Query: 456 LNGYVLDGRALKVN 497 N ++DGR VN Sbjct: 72 PNP-IIDGRKANVN 84
>RNPC1_MOUSE (Q62176) RNA-binding region-containing protein 1 (ssDNA binding| protein SEB4) Length = 237 Score = 58.9 bits (141), Expect = 8e-09 Identities = 31/74 (41%), Positives = 43/74 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FVG LP+ A L FE G +E VI D+ TG+SRG+GFVTM+ + A + Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKD 92 Query: 456 LNGYVLDGRALKVN 497 N ++DGR VN Sbjct: 93 PNP-IIDGRKANVN 105
>TRA2A_MOUSE (Q6PFR5) Transformer-2 protein homolog (TRA-2 alpha)| Length = 281 Score = 58.5 bits (140), Expect = 1e-08 Identities = 27/59 (45%), Positives = 40/59 (67%) Frame = +3 Query: 321 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKVN 497 L +F + G + V V+YD+ TGRSRGF FV +++ +EA+ER NG LDGR ++V+ Sbjct: 133 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVD 191
>TRA2A_HUMAN (Q13595) Transformer-2 protein homolog (TRA-2 alpha)| Length = 282 Score = 58.5 bits (140), Expect = 1e-08 Identities = 27/59 (45%), Positives = 40/59 (67%) Frame = +3 Query: 321 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKVN 497 L +F + G + V V+YD+ TGRSRGF FV +++ +EA+ER NG LDGR ++V+ Sbjct: 135 LREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVD 193
>GRP2_ARATH (Q9SVM8) Glycine-rich RNA-binding protein 2, mitochondrial| precursor (AtGRP2) Length = 158 Score = 58.5 bits (140), Expect = 1e-08 Identities = 29/74 (39%), Positives = 42/74 (56%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L + D A L F G V +VI D+ TGRSRGFGFV + A+ Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 Query: 456 LNGYVLDGRALKVN 497 ++G L+GR ++VN Sbjct: 96 MDGKELNGRHIRVN 109
>FOX1_CAEEL (Q10572) Sex determination protein fox-1 (Feminizing locus on X| protein 1) Length = 415 Score = 57.4 bits (137), Expect = 2e-08 Identities = 29/74 (39%), Positives = 47/74 (63%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+ V N+PF L +FE+ G V VE+I+++ S+GFGFVTM ++ E A + Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAERARQE 211 Query: 456 LNGYVLDGRALKVN 497 L+G +++GR ++VN Sbjct: 212 LHGSMIEGRKIEVN 225
>RBM34_HUMAN (P42696) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 430 Score = 57.0 bits (136), Expect = 3e-08 Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 1/78 (1%) Frame = +3 Query: 264 SEDLR-VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 S D R VFVGNLP+ V+ + + F GS+ V ++ DK+TG +GFG+V + V Sbjct: 283 SRDKRSVFVGNLPYKVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVH 342 Query: 441 EAVERLNGYVLDGRALKV 494 A+ +LN L GR L+V Sbjct: 343 LAL-KLNNSELMGRKLRV 359 Score = 29.3 bits (64), Expect = 6.4 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMV 362 VFVGNLP + + +L F++ G +E V Sbjct: 187 VFVGNLPVTCNKKKLKSFFKEYGQIESV 214
>ELAV3_MOUSE (Q60900) ELAV-like protein 3 (Hu-antigen C) (HuC)| Length = 367 Score = 57.0 bits (136), Expect = 3e-08 Identities = 32/73 (43%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL D + L LF G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 459 NGYVLDGRALKVN 497 NGY L R L+V+ Sbjct: 346 NGYRLGERVLQVS 358 Score = 52.8 bits (125), Expect = 5e-07 Identities = 24/73 (32%), Positives = 42/73 (57%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP ++ + LF G +E +++ DK+TG+S G+GFV S + ++A+ L Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 459 NGYVLDGRALKVN 497 NG L + +KV+ Sbjct: 101 NGLKLQTKTIKVS 113 Score = 48.5 bits (114), Expect = 1e-05 Identities = 23/65 (35%), Positives = 36/65 (55%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D ++V LP ++ ++ LF Q G + ++ D+ TG SRG GF+ E EEA+ Sbjct: 124 DANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAI 183 Query: 450 ERLNG 464 + LNG Sbjct: 184 KGLNG 188
>ELAV3_HUMAN (Q14576) ELAV-like protein 3 (Hu-antigen C) (HuC) (Paraneoplastic| cerebellar degeneration-associated antigen) (Paraneoplastic limbic encephalitis antigen 21) Length = 367 Score = 57.0 bits (136), Expect = 3e-08 Identities = 32/73 (43%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL D + L LF G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 286 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASL 345 Query: 459 NGYVLDGRALKVN 497 NGY L R L+V+ Sbjct: 346 NGYRLGERVLQVS 358 Score = 52.8 bits (125), Expect = 5e-07 Identities = 24/73 (32%), Positives = 42/73 (57%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP ++ + LF G +E +++ DK+TG+S G+GFV S + ++A+ L Sbjct: 41 LIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTL 100 Query: 459 NGYVLDGRALKVN 497 NG L + +KV+ Sbjct: 101 NGLKLQTKTIKVS 113 Score = 49.3 bits (116), Expect = 6e-06 Identities = 23/65 (35%), Positives = 37/65 (56%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D ++V LP ++ ++ LF Q G + ++ D++TG SRG GF+ E EEA+ Sbjct: 124 DANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 183 Query: 450 ERLNG 464 + LNG Sbjct: 184 KGLNG 188
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 57.0 bits (136), Expect = 3e-08 Identities = 28/74 (37%), Positives = 41/74 (55%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E +FVG L +S+D L FE G V VIY++ T RSRG+G+V E+A Sbjct: 166 EPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKA 225 Query: 447 VERLNGYVLDGRAL 488 ++ + G +DGR + Sbjct: 226 IQEMQGKEIDGRPI 239 Score = 48.9 bits (115), Expect = 8e-06 Identities = 23/73 (31%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+GNL F+ D + LF + G V V + T + +GFG+V S +E+ ++A++ L Sbjct: 269 LFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDAL 328 Query: 459 NGYVLDGRALKVN 497 G +D R ++++ Sbjct: 329 QGEYIDNRPVRLD 341
>ELAV_DROME (P16914) Protein elav (Embryonic lethal abnormal visual protein)| Length = 483 Score = 56.6 bits (135), Expect = 4e-08 Identities = 26/73 (35%), Positives = 44/73 (60%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL + A L LF G+V+ V+++ D T + +G+GFV+M+ +E A+ L Sbjct: 404 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 463 Query: 459 NGYVLDGRALKVN 497 NGY + R L+V+ Sbjct: 464 NGYTMGNRVLQVS 476 Score = 43.9 bits (102), Expect = 3e-04 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 13/86 (15%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLT-------------GRSRGFGFVTM 419 + V LP ++ ++ LF G +E V++I DK G+S G+GFV Sbjct: 151 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 210 Query: 420 STVEEVEEAVERLNGYVLDGRALKVN 497 ++ E+AV LNG L + +KV+ Sbjct: 211 VRPQDAEQAVNVLNGLRLQNKTIKVS 236 Score = 28.9 bits (63), Expect = 8.3 Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTG-RSRGFGFVTMSTVEEVEEAVER 455 ++V LP ++ +L +F G++ ++ + +++G GF+ EE A+ Sbjct: 250 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIA 309 Query: 456 LNG 464 LNG Sbjct: 310 LNG 312
>TCG1_SCHPO (Q9HEQ9) Single-stranded TG1-3 DNA-binding protein| Length = 348 Score = 56.6 bits (135), Expect = 4e-08 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 4/81 (4%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSR----GFGFVTMSTVE 431 ++D RVFVG L S +++ LFE G+V V + + ++ +R G FVT + E Sbjct: 41 ADDFRVFVGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQE 100 Query: 432 EVEEAVERLNGYVLDGRALKV 494 +V++A+E LNG LD R + V Sbjct: 101 DVDKAIETLNGKTLDDREIVV 121 Score = 33.1 bits (74), Expect = 0.44 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = +3 Query: 390 RSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKVNS 500 R RGFGFV+ + E+ A+E +NG + L V S Sbjct: 256 RGRGFGFVSFANAEDQSRAIEEMNGKQVGDLTLVVKS 292
>ELAV_DROVI (P23241) Protein elav (Embryonic lethal abnormal visual protein)| Length = 519 Score = 56.6 bits (135), Expect = 4e-08 Identities = 26/73 (35%), Positives = 44/73 (60%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL + A L LF G+V+ V+++ D T + +G+GFV+M+ +E A+ L Sbjct: 440 IFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRAL 499 Query: 459 NGYVLDGRALKVN 497 NGY + R L+V+ Sbjct: 500 NGYTMGNRVLQVS 512 Score = 43.9 bits (102), Expect = 3e-04 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 13/86 (15%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLT-------------GRSRGFGFVTM 419 + V LP ++ ++ LF G +E V++I DK G+S G+GFV Sbjct: 187 LIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNY 246 Query: 420 STVEEVEEAVERLNGYVLDGRALKVN 497 ++ E+AV LNG L + +KV+ Sbjct: 247 VRPQDAEQAVNVLNGLRLQNKTIKVS 272 Score = 28.9 bits (63), Expect = 8.3 Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTG-RSRGFGFVTMSTVEEVEEAVER 455 ++V LP ++ +L +F G++ ++ + +++G GF+ EE A+ Sbjct: 286 LYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIA 345 Query: 456 LNG 464 LNG Sbjct: 346 LNG 348
>ELAV4_MOUSE (Q61701) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 385 Score = 56.2 bits (134), Expect = 5e-08 Identities = 32/73 (43%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL D + L LF G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 304 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 363 Query: 459 NGYVLDGRALKVN 497 NGY L R L+V+ Sbjct: 364 NGYRLGDRVLQVS 376 Score = 52.0 bits (123), Expect = 9e-07 Identities = 24/73 (32%), Positives = 42/73 (57%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP ++ + LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 53 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112 Query: 459 NGYVLDGRALKVN 497 NG L + +KV+ Sbjct: 113 NGLRLQTKTIKVS 125 Score = 49.7 bits (117), Expect = 5e-06 Identities = 24/65 (36%), Positives = 37/65 (56%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA+ Sbjct: 136 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 195 Query: 450 ERLNG 464 + LNG Sbjct: 196 KGLNG 200
>SXL_DROSU (Q24668) Protein sex-lethal| Length = 354 Score = 56.2 bits (134), Expect = 5e-08 Identities = 27/71 (38%), Positives = 42/71 (59%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 +D ++V NLP ++ QL +F + GS+ ++ DKLTGR RG FV + EE +EA Sbjct: 211 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEA 270 Query: 447 VERLNGYVLDG 479 + LN + +G Sbjct: 271 ISALNNVIPEG 281 Score = 42.4 bits (98), Expect = 7e-04 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S + + V LP + +L LF G + ++ D TG S G+ FV ++ + + Sbjct: 124 SSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQR 183 Query: 444 AVERLNGYVLDGRALKVN 497 A++ LNG + + LKV+ Sbjct: 184 AIKVLNGITVRNKRLKVS 201
>SXL_DROME (P19339) Protein sex-lethal| Length = 354 Score = 56.2 bits (134), Expect = 5e-08 Identities = 27/71 (38%), Positives = 42/71 (59%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 +D ++V NLP ++ QL +F + GS+ ++ DKLTGR RG FV + EE +EA Sbjct: 209 KDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEA 268 Query: 447 VERLNGYVLDG 479 + LN + +G Sbjct: 269 ISALNNVIPEG 279 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/78 (26%), Positives = 39/78 (50%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 + + + V LP + +L LF G + ++ D TG S G+ FV ++ + + Sbjct: 122 ASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQR 181 Query: 444 AVERLNGYVLDGRALKVN 497 A++ LNG + + LKV+ Sbjct: 182 AIKVLNGITVRNKRLKVS 199
>ELAV4_RAT (O09032) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 373 Score = 56.2 bits (134), Expect = 5e-08 Identities = 32/73 (43%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL D + L LF G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 292 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 351 Query: 459 NGYVLDGRALKVN 497 NGY L R L+V+ Sbjct: 352 NGYRLGDRVLQVS 364 Score = 52.0 bits (123), Expect = 9e-07 Identities = 24/73 (32%), Positives = 42/73 (57%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP ++ + LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 41 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 459 NGYVLDGRALKVN 497 NG L + +KV+ Sbjct: 101 NGLRLQTKTIKVS 113 Score = 49.7 bits (117), Expect = 5e-06 Identities = 24/65 (36%), Positives = 37/65 (56%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA+ Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 183 Query: 450 ERLNG 464 + LNG Sbjct: 184 KGLNG 188
>ELAV1_MOUSE (P70372) ELAV-like protein 1 (Hu-antigen R) (HuR) (Elav-like| generic protein) (MelG) Length = 326 Score = 56.2 bits (134), Expect = 5e-08 Identities = 27/73 (36%), Positives = 41/73 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP ++ +L LF G VE ++I DK+ G S G+GFV T ++ E A+ L Sbjct: 22 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81 Query: 459 NGYVLDGRALKVN 497 NG L + +KV+ Sbjct: 82 NGLRLQSKTIKVS 94 Score = 53.5 bits (127), Expect = 3e-07 Identities = 30/73 (41%), Positives = 42/73 (57%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL D L +F G+V V+VI D T + +GFGFVTM+ EE A+ L Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASL 305 Query: 459 NGYVLDGRALKVN 497 NGY L + L+V+ Sbjct: 306 NGYRLGDKILQVS 318 Score = 39.7 bits (91), Expect = 0.005 Identities = 18/67 (26%), Positives = 33/67 (49%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 +D +++ LP ++ + +F + G + V+ D+ TG SRG F+ E EEA Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163 Query: 447 VERLNGY 467 + G+ Sbjct: 164 ITSFIGH 170
>ELAV4_HUMAN (P26378) ELAV-like protein 4 (Paraneoplastic encephalomyelitis| antigen HuD) (Hu-antigen D) Length = 380 Score = 56.2 bits (134), Expect = 5e-08 Identities = 32/73 (43%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL D + L LF G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 299 IFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 358 Query: 459 NGYVLDGRALKVN 497 NGY L R L+V+ Sbjct: 359 NGYRLGDRVLQVS 371 Score = 52.0 bits (123), Expect = 9e-07 Identities = 24/73 (32%), Positives = 42/73 (57%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP ++ + LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 48 LIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107 Query: 459 NGYVLDGRALKVN 497 NG L + +KV+ Sbjct: 108 NGLRLQTKTIKVS 120 Score = 49.7 bits (117), Expect = 5e-06 Identities = 24/65 (36%), Positives = 37/65 (56%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA+ Sbjct: 131 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAI 190 Query: 450 ERLNG 464 + LNG Sbjct: 191 KGLNG 195
>RBM34_RAT (Q5M9F1) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 428 Score = 56.2 bits (134), Expect = 5e-08 Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Frame = +3 Query: 264 SEDLR-VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 S D R VFVGNLP+ VD + L F GS+ V ++ + LTG RGFG+V + V Sbjct: 281 SRDKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVH 340 Query: 441 EAVERLNGYVLDGRALKV 494 A+ +LN L GR L+V Sbjct: 341 LAL-KLNNSELMGRKLRV 357 Score = 30.0 bits (66), Expect = 3.7 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVE---------VIYDKLTGRSRGF--------G 407 VFVGNLP + + +L F++ G VE V + KL R F Sbjct: 185 VFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKSINA 244 Query: 408 FVTMSTVEEVEEAVERLNGYVLDGRALKVN 497 +V +A++R + +G ++V+ Sbjct: 245 YVVFKEERAAAKALQRNGAQIAEGFRIRVD 274
>A2BP1_MOUSE (Q9JJ43) Ataxin-2-binding protein 1| Length = 396 Score = 55.8 bits (133), Expect = 6e-08 Identities = 29/79 (36%), Positives = 48/79 (60%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S+ R+ V N+PF L +F Q G + VE+I+++ S+GFGFVT + + Sbjct: 113 SQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADR 170 Query: 444 AVERLNGYVLDGRALKVNS 500 A E+L+G V++GR ++VN+ Sbjct: 171 AREKLHGTVVEGRKIEVNN 189
>A2BP1_HUMAN (Q9NWB1) Ataxin-2-binding protein 1| Length = 397 Score = 55.8 bits (133), Expect = 6e-08 Identities = 29/79 (36%), Positives = 48/79 (60%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S+ R+ V N+PF L +F Q G + VE+I+++ S+GFGFVT + + Sbjct: 114 SQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADR 171 Query: 444 AVERLNGYVLDGRALKVNS 500 A E+L+G V++GR ++VN+ Sbjct: 172 AREKLHGTVVEGRKIEVNN 190
>ELAV1_HUMAN (Q15717) ELAV-like protein 1 (Hu-antigen R) (HuR)| Length = 326 Score = 55.8 bits (133), Expect = 6e-08 Identities = 27/73 (36%), Positives = 41/73 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP ++ +L LF G VE ++I DK+ G S G+GFV T ++ E A+ L Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81 Query: 459 NGYVLDGRALKVN 497 NG L + +KV+ Sbjct: 82 NGLRLQSKTIKVS 94 Score = 54.3 bits (129), Expect = 2e-07 Identities = 30/73 (41%), Positives = 42/73 (57%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL D L +F G+V V+VI D T + +GFGFVTM+ EE A+ L Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASL 305 Query: 459 NGYVLDGRALKVN 497 NGY L + L+V+ Sbjct: 306 NGYRLGDKILQVS 318 Score = 43.1 bits (100), Expect = 4e-04 Identities = 19/67 (28%), Positives = 34/67 (50%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 +D +++ LP ++ + +F + G + V+ D+ TG SRG F+ E EEA Sbjct: 104 KDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEA 163 Query: 447 VERLNGY 467 + NG+ Sbjct: 164 ITSFNGH 170
>ELAV2_RAT (Q8CH84) ELAV-like protein 2 (Hu-antigen B) (HuB)| Length = 359 Score = 55.5 bits (132), Expect = 8e-08 Identities = 31/73 (42%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL D + L +F G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 459 NGYVLDGRALKVN 497 NGY L R L+V+ Sbjct: 338 NGYRLGDRVLQVS 350 Score = 52.4 bits (124), Expect = 7e-07 Identities = 24/68 (35%), Positives = 41/68 (60%) Frame = +3 Query: 294 LPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVL 473 LP ++ +L LF G +E +++ DK+TG+S G+GFV ++ E+A+ LNG L Sbjct: 46 LPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRL 105 Query: 474 DGRALKVN 497 + +KV+ Sbjct: 106 QTKTIKVS 113 Score = 49.7 bits (117), Expect = 5e-06 Identities = 24/65 (36%), Positives = 37/65 (56%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA+ Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Query: 450 ERLNG 464 + LNG Sbjct: 184 KGLNG 188
>ELAV2_PONPY (Q5R9Z6) ELAV-like protein 2| Length = 359 Score = 55.5 bits (132), Expect = 8e-08 Identities = 31/73 (42%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL D + L +F G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 459 NGYVLDGRALKVN 497 NGY L R L+V+ Sbjct: 338 NGYRLGDRVLQVS 350 Score = 53.5 bits (127), Expect = 3e-07 Identities = 25/73 (34%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP ++ +L LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 459 NGYVLDGRALKVN 497 NG L + +KV+ Sbjct: 101 NGLRLQTKTIKVS 113 Score = 49.7 bits (117), Expect = 5e-06 Identities = 24/65 (36%), Positives = 37/65 (56%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA+ Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Query: 450 ERLNG 464 + LNG Sbjct: 184 KGLNG 188
>ELAV2_HUMAN (Q12926) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1) Length = 359 Score = 55.5 bits (132), Expect = 8e-08 Identities = 31/73 (42%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL D + L +F G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 278 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 337 Query: 459 NGYVLDGRALKVN 497 NGY L R L+V+ Sbjct: 338 NGYRLGDRVLQVS 350 Score = 53.5 bits (127), Expect = 3e-07 Identities = 25/73 (34%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP ++ +L LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 459 NGYVLDGRALKVN 497 NG L + +KV+ Sbjct: 101 NGLRLQTKTIKVS 113 Score = 49.7 bits (117), Expect = 5e-06 Identities = 24/65 (36%), Positives = 37/65 (56%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA+ Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Query: 450 ERLNG 464 + LNG Sbjct: 184 KGLNG 188
>ELAV2_MOUSE (Q60899) ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like| neuronal protein 1) (Nervous system-specific RNA-binding protein Mel-N1) Length = 360 Score = 55.5 bits (132), Expect = 8e-08 Identities = 31/73 (42%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL D + L +F G+V V+VI D T + +GFGFVTM+ +E A+ L Sbjct: 279 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASL 338 Query: 459 NGYVLDGRALKVN 497 NGY L R L+V+ Sbjct: 339 NGYRLGDRVLQVS 351 Score = 53.5 bits (127), Expect = 3e-07 Identities = 25/73 (34%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP ++ +L LF G +E +++ DK+TG+S G+GFV ++ E+A+ L Sbjct: 41 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100 Query: 459 NGYVLDGRALKVN 497 NG L + +KV+ Sbjct: 101 NGLRLQTKTIKVS 113 Score = 49.7 bits (117), Expect = 5e-06 Identities = 24/65 (36%), Positives = 37/65 (56%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D ++V LP ++ +L LF Q G + ++ D++TG SRG GF+ E EEA+ Sbjct: 124 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAI 183 Query: 450 ERLNG 464 + LNG Sbjct: 184 KGLNG 188
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 55.1 bits (131), Expect = 1e-07 Identities = 29/59 (49%), Positives = 36/59 (61%) Frame = +3 Query: 321 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKVN 497 L F G V ++I D+ T RSRGFGFVT ST E + A+E +NG LDGR + VN Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVN 61
>PUB1_YEAST (P32588) Nuclear and cytoplasmic polyadenylated RNA-binding protein| PUB1 (ARS consensus-binding protein ACBP-60) (Poly(U)-binding protein) (Poly uridylate-binding protein) Length = 452 Score = 55.1 bits (131), Expect = 1e-07 Identities = 26/77 (33%), Positives = 46/77 (59%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + +FVG+L +VD L F+ S V++D TG SRG+GFV+ ++ ++ + A Sbjct: 159 DTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNA 218 Query: 447 VERLNGYVLDGRALKVN 497 ++ + G L+GR L++N Sbjct: 219 MDSMQGQDLNGRPLRIN 235 Score = 35.0 bits (79), Expect = 0.12 Identities = 18/78 (23%), Positives = 39/78 (50%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 + D ++VGNL ++ L F+ G + ++++ DK ++ + FV + Sbjct: 71 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDK-NNKNVNYAFVEYHQSHDANI 129 Query: 444 AVERLNGYVLDGRALKVN 497 A++ LNG ++ +K+N Sbjct: 130 ALQTLNGKQIENNIVKIN 147
>NAM8_YEAST (Q00539) Protein NAM8| Length = 523 Score = 54.7 bits (130), Expect = 1e-07 Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 +FVG+L +V +QL LF + S ++++D++TG S+G+GFV + +E + A+ Sbjct: 165 IFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSE 224 Query: 456 LNGYVLDGRALKV 494 + G L+GRA+KV Sbjct: 225 MQGVFLNGRAIKV 237
>RBM9_HUMAN (O43251) RNA-binding protein 9 (RNA-binding motif protein 9)| (Hexaribonucleotide-binding protein 2) (Repressor of tamoxifen transcriptional activity) Length = 390 Score = 54.7 bits (130), Expect = 1e-07 Identities = 28/75 (37%), Positives = 46/75 (61%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+ V N+PF L +F Q G + VE+I+++ S+GFGFVT + + A E+ Sbjct: 122 RLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG--SKGFGFVTFENSADADRAREK 179 Query: 456 LNGYVLDGRALKVNS 500 L+G V++GR ++VN+ Sbjct: 180 LHGTVVEGRKIEVNN 194
>SXL_MUSDO (O17310) Sex-lethal homolog| Length = 324 Score = 54.7 bits (130), Expect = 1e-07 Identities = 25/71 (35%), Positives = 42/71 (59%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 +D ++V NLP ++ +L +F + G++ ++ DKLTGR RG FV + EE +EA Sbjct: 186 KDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEA 245 Query: 447 VERLNGYVLDG 479 + LN + +G Sbjct: 246 ISALNNVIPEG 256 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/73 (27%), Positives = 37/73 (50%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP + +L LF G + ++ D TG S G+ FV ++ + + A++ + Sbjct: 104 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTV 163 Query: 459 NGYVLDGRALKVN 497 NG + + LKV+ Sbjct: 164 NGITVRNKRLKVS 176
>RBM34_MOUSE (Q8C5L7) RNA-binding protein 34 (RNA-binding motif protein 34)| Length = 375 Score = 54.7 bits (130), Expect = 1e-07 Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Frame = +3 Query: 264 SEDLR-VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 S D R VFVGNLP+ ++ + L F GS+ V ++ + LTG RGFG+V + V Sbjct: 287 SRDKRSVFVGNLPYKIEDSALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVH 346 Query: 441 EAVERLNGYVLDGRALKV 494 A+ +LN L GR L+V Sbjct: 347 LAL-KLNNSELMGRKLRV 363 Score = 30.0 bits (66), Expect = 3.7 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 17/90 (18%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVE---------VIYDKLTGRSRGF--------G 407 VFVGNLP + + +L F++ G VE V + KL R F Sbjct: 191 VFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSINA 250 Query: 408 FVTMSTVEEVEEAVERLNGYVLDGRALKVN 497 +V +A++R + +G ++V+ Sbjct: 251 YVVFKDESAAAKALQRNGAQIAEGFRIRVD 280
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 54.3 bits (129), Expect = 2e-07 Identities = 25/59 (42%), Positives = 38/59 (64%) Frame = +3 Query: 321 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKVN 497 L +F + G + V ++YD+ + RSRGF FV V++ +EA ER NG LDGR ++V+ Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 54.3 bits (129), Expect = 2e-07 Identities = 25/59 (42%), Positives = 38/59 (64%) Frame = +3 Query: 321 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKVN 497 L +F + G + V ++YD+ + RSRGF FV V++ +EA ER NG LDGR ++V+ Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 54.3 bits (129), Expect = 2e-07 Identities = 25/59 (42%), Positives = 38/59 (64%) Frame = +3 Query: 321 LAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKVN 497 L +F + G + V ++YD+ + RSRGF FV V++ +EA ER NG LDGR ++V+ Sbjct: 134 LREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVD 192
>CTF1_SCHPO (O43040) Cleavage and termination factor 1 (Transcription| termination factor ctf1) Length = 363 Score = 54.3 bits (129), Expect = 2e-07 Identities = 26/72 (36%), Positives = 39/72 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFVGN+P+ V Q+ +F Q G V+ +++ D TG +G+GF E AV +L Sbjct: 9 VFVGNIPYDVSEQQMTEIFNQVGPVKTFKLVLDPETGSGKGYGFCEFFDSETTAMAVRKL 68 Query: 459 NGYVLDGRALKV 494 N L R ++V Sbjct: 69 NNSELGPRKIRV 80
>GBP2_YEAST (P25555) Single-strand telomeric DNA-binding protein GBP2| (G-strand-binding protein 2) (RAP1 localization factor 6) Length = 427 Score = 53.9 bits (128), Expect = 2e-07 Identities = 29/75 (38%), Positives = 44/75 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VF+ NLP+S++ L +F++ G V +V D G SRGFG V T +E+ A++ Sbjct: 221 VFIINLPYSMNWQSLKDMFKECGHVLRADVELD-FNGFSRGFGSVIYPTEDEMIRAIDTF 279 Query: 459 NGYVLDGRALKVNSG 503 NG ++GR L+V G Sbjct: 280 NGMEVEGRVLEVREG 294
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 53.9 bits (128), Expect = 2e-07 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-N 72 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 73 ARPHKVDGRVVE 84 Score = 47.8 bits (112), Expect = 2e-05 Identities = 20/58 (34%), Positives = 35/58 (60%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ V Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 53.9 bits (128), Expect = 2e-07 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-N 72 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 73 ARPHKVDGRVVE 84 Score = 47.8 bits (112), Expect = 2e-05 Identities = 20/58 (34%), Positives = 35/58 (60%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ V Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 53.9 bits (128), Expect = 2e-07 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-N 72 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 73 ARPHKVDGRVVE 84 Score = 47.8 bits (112), Expect = 2e-05 Identities = 20/58 (34%), Positives = 35/58 (60%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ V Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>ROA1_BOVIN (P09867) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (Unwinding protein 1) (UP1) (Fragment) Length = 195 Score = 53.9 bits (128), Expect = 2e-07 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVEEV+ A+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-N 72 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 73 ARPHKVDGRVVE 84 Score = 47.8 bits (112), Expect = 2e-05 Identities = 20/58 (34%), Positives = 35/58 (60%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ V Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIV 162
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 53.9 bits (128), Expect = 2e-07 Identities = 25/71 (35%), Positives = 40/71 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 V++G++P+ Q+ L G V +++++D TGRS+G+ F+ +E AV L Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 79 Query: 459 NGYVLDGRALK 491 NGY L R LK Sbjct: 80 NGYQLGSRFLK 90
>SXL_CHRRU (O97018) Sex-lethal homolog| Length = 307 Score = 53.5 bits (127), Expect = 3e-07 Identities = 24/71 (33%), Positives = 42/71 (59%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 +D ++V NLP ++ +L +F + G++ ++ DKLTG+ RG FV + EE +EA Sbjct: 169 KDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEA 228 Query: 447 VERLNGYVLDG 479 + LN + +G Sbjct: 229 ISALNNVIPEG 239 Score = 42.4 bits (98), Expect = 7e-04 Identities = 21/73 (28%), Positives = 37/73 (50%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP + +L LF G + ++ D TG S G+ FV ++ + + A++ L Sbjct: 87 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSL 146 Query: 459 NGYVLDGRALKVN 497 NG + + LKV+ Sbjct: 147 NGVTVRNKRLKVS 159
>SXL_CERCA (O61374) Sex-lethal homolog (CCSXL)| Length = 348 Score = 53.5 bits (127), Expect = 3e-07 Identities = 25/71 (35%), Positives = 41/71 (57%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 +D ++V NLP ++ QL +F + G + ++ DKLTG+ RG FV + EE +EA Sbjct: 194 KDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEA 253 Query: 447 VERLNGYVLDG 479 + LN + +G Sbjct: 254 ISALNNVIPEG 264 Score = 42.4 bits (98), Expect = 7e-04 Identities = 22/78 (28%), Positives = 37/78 (47%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S + V LP + +L LF G + ++ D TG S G+ FV + + + Sbjct: 107 SNGTNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQR 166 Query: 444 AVERLNGYVLDGRALKVN 497 A++ LNG + + LKV+ Sbjct: 167 AIKSLNGITVRNKRLKVS 184
>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)| (CeSF2/ASF) Length = 258 Score = 53.1 bits (126), Expect = 4e-07 Identities = 27/77 (35%), Positives = 43/77 (55%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 SED +V+VGNLP V ++ +F + G ++ V++ +GR F FV + E+ Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHRDAED 61 Query: 444 AVERLNGYVLDGRALKV 494 AV +GY DGR ++V Sbjct: 62 AVRARDGYEFDGRRIRV 78
>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 53.1 bits (126), Expect = 4e-07 Identities = 24/73 (32%), Positives = 44/73 (60%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L + L +F + G + + ++ D+ T +SRGF FVT+ + + ++A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARD 68 Query: 456 LNGYVLDGRALKV 494 +NG LDG+A+KV Sbjct: 69 MNGKSLDGKAIKV 81
>PABP5_PONPY (P60050) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 53.1 bits (126), Expect = 4e-07 Identities = 31/72 (43%), Positives = 44/72 (61%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 459 NGYVLDGRALKV 494 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 45.4 bits (106), Expect = 9e-05 Identities = 22/75 (29%), Positives = 42/75 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NL +++ +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 459 NGYVLDGRALKVNSG 503 NG ++ + L V G Sbjct: 362 NGRIVGSKPLHVTLG 376 Score = 35.8 bits (81), Expect = 0.068 Identities = 20/72 (27%), Positives = 37/72 (51%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 459 NGYVLDGRALKV 494 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177 Score = 32.7 bits (73), Expect = 0.58 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 459 NGYVLDGRALKV 494 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91
>PABP5_PANTR (P60049) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 53.1 bits (126), Expect = 4e-07 Identities = 31/72 (43%), Positives = 44/72 (61%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 459 NGYVLDGRALKV 494 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 45.4 bits (106), Expect = 9e-05 Identities = 22/75 (29%), Positives = 42/75 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NL +++ +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 459 NGYVLDGRALKVNSG 503 NG ++ + L V G Sbjct: 362 NGRIVGSKPLHVTLG 376 Score = 35.8 bits (81), Expect = 0.068 Identities = 20/72 (27%), Positives = 37/72 (51%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 459 NGYVLDGRALKV 494 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177 Score = 32.7 bits (73), Expect = 0.58 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 459 NGYVLDGRALKV 494 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91
>PABP5_MACMU (Q7JGR2) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 53.1 bits (126), Expect = 4e-07 Identities = 31/72 (43%), Positives = 44/72 (61%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 459 NGYVLDGRALKV 494 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 45.8 bits (107), Expect = 7e-05 Identities = 23/75 (30%), Positives = 42/75 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NL +++ +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 459 NGYVLDGRALKVNSG 503 NG V+ + L V G Sbjct: 362 NGRVVGSKPLHVTLG 376 Score = 35.8 bits (81), Expect = 0.068 Identities = 20/72 (27%), Positives = 37/72 (51%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 459 NGYVLDGRALKV 494 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177 Score = 32.7 bits (73), Expect = 0.58 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 459 NGYVLDGRALKV 494 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91
>PABP5_HYLLA (P60048) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 53.1 bits (126), Expect = 4e-07 Identities = 31/72 (43%), Positives = 44/72 (61%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 459 NGYVLDGRALKV 494 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 45.4 bits (106), Expect = 9e-05 Identities = 22/75 (29%), Positives = 42/75 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NL +++ +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 459 NGYVLDGRALKVNSG 503 NG ++ + L V G Sbjct: 362 NGRIVGSKPLHVTLG 376 Score = 35.8 bits (81), Expect = 0.068 Identities = 20/72 (27%), Positives = 37/72 (51%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 459 NGYVLDGRALKV 494 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177 Score = 32.7 bits (73), Expect = 0.58 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 459 NGYVLDGRALKV 494 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91
>PABP5_HUMAN (Q96DU9) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 53.1 bits (126), Expect = 4e-07 Identities = 31/72 (43%), Positives = 44/72 (61%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 459 NGYVLDGRALKV 494 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 45.4 bits (106), Expect = 9e-05 Identities = 22/75 (29%), Positives = 42/75 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NL +++ +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 459 NGYVLDGRALKVNSG 503 NG ++ + L V G Sbjct: 362 NGRIVGSKPLHVTLG 376 Score = 35.8 bits (81), Expect = 0.068 Identities = 20/72 (27%), Positives = 37/72 (51%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 459 NGYVLDGRALKV 494 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177 Score = 32.7 bits (73), Expect = 0.58 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 459 NGYVLDGRALKV 494 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91
>PABP5_GORGO (P60047) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 382 Score = 53.1 bits (126), Expect = 4e-07 Identities = 31/72 (43%), Positives = 44/72 (61%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFV N+ +D +L LF + G E V+VI D +G+S+GFGFV T E ++AV L Sbjct: 201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 259 Query: 459 NGYVLDGRALKV 494 +G +DG+ L V Sbjct: 260 HGKSIDGKVLYV 271 Score = 45.4 bits (106), Expect = 9e-05 Identities = 22/75 (29%), Positives = 42/75 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NL +++ +L F GS+ +V+ + G+ +GFG V S+ EE +AV+ + Sbjct: 304 IYIKNLDETINDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEM 361 Query: 459 NGYVLDGRALKVNSG 503 NG ++ + L V G Sbjct: 362 NGRIVGSKPLHVTLG 376 Score = 35.8 bits (81), Expect = 0.068 Identities = 20/72 (27%), Positives = 37/72 (51%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L LF G++ +V+ D S+G+ +V ++ A+ + Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHM 165 Query: 459 NGYVLDGRALKV 494 NG L+ R + V Sbjct: 166 NGVRLNNRQVYV 177 Score = 32.7 bits (73), Expect = 0.58 Identities = 17/72 (23%), Positives = 34/72 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG+L V L F AG + + D +T G+G+V + E A+ + Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 459 NGYVLDGRALKV 494 N +++G+ ++ Sbjct: 80 NFDLINGKPFRL 91
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 53.1 bits (126), Expect = 4e-07 Identities = 25/73 (34%), Positives = 44/73 (60%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFVGNL F+ L+ F G ++ + + D +GR +GFG+VT S ++ ++ VE + Sbjct: 368 VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVE-M 426 Query: 459 NGYVLDGRALKVN 497 NG+ + GR +++ Sbjct: 427 NGHFIAGRPCRLD 439 Score = 52.0 bits (123), Expect = 9e-07 Identities = 28/78 (35%), Positives = 43/78 (55%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 +E VFVG L ++VD L FE+ G++ VI D +GRS+G+G+V T E + Sbjct: 260 NETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFETPEAAKA 319 Query: 444 AVERLNGYVLDGRALKVN 497 AV +DGR + ++ Sbjct: 320 AVAANGTKEIDGRMVNLD 337
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 52.8 bits (125), Expect = 5e-07 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV + + +L +F + G+V V ++ + +T SRGFGF++ STVEE A++ L Sbjct: 103 LFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDNL 162 Query: 459 NGYVLDGRALKV 494 N GR L V Sbjct: 163 NSQEFYGRVLNV 174
>HNRPG_HUMAN (P38159) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) (Glycoprotein p43) Length = 391 Score = 52.8 bits (125), Expect = 5e-07 Identities = 25/73 (34%), Positives = 43/73 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L + L +F + G + V ++ D+ T +SRGF FVT + + ++A Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARD 68 Query: 456 LNGYVLDGRALKV 494 +NG LDG+A+KV Sbjct: 69 MNGKSLDGKAIKV 81
>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2| Length = 326 Score = 52.8 bits (125), Expect = 5e-07 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FVG LP+ + + +F Q G + + ++ DK TG+S+GF F+ AV+ Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97 Query: 459 NGYVLDGRALKVN 497 NG + GR ++V+ Sbjct: 98 NGIKIKGRTIRVD 110
>RBM28_HUMAN (Q9NW13) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 758 Score = 52.8 bits (125), Expect = 5e-07 Identities = 27/65 (41%), Positives = 40/65 (61%) Frame = +3 Query: 273 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 L +FVG LP S S QL LF Q G V+ V+ +K + RGFG+VT S +E+V+ A++ Sbjct: 3 LTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62 Query: 453 RLNGY 467 + + Sbjct: 63 EITTF 67 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 +E VF+ NL F + +L L +Q G ++ V ++ T S+G F T E ++ Sbjct: 331 NEGKTVFIRNLSFDSEEEELGELLQQFGELKYVRIVLHPDTEHSKGCAFAQFMTQEAAQK 390 Query: 444 AV------ERLNGYVLDGRALKVN 497 + G LDGR LKV+ Sbjct: 391 CLLAASPENEAGGLKLDGRQLKVD 414 Score = 39.3 bits (90), Expect = 0.006 Identities = 25/74 (33%), Positives = 38/74 (51%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+ + NL F L +F Q G+V V I K G+ RGFGFV + E +A++ Sbjct: 114 RLIIRNLSFKCSEDDLKTVFAQFGAVLEVN-IPRKPDGKMRGFGFVQFKNLLEAGKALKG 172 Query: 456 LNGYVLDGRALKVN 497 +N + GR + V+ Sbjct: 173 MNMKEIKGRTVAVD 186
>EPAB_XENTR (Q6DEY7) Embryonic polyadenylate-binding protein (Embryonic poly(A)| binding protein) (ePABP) Length = 629 Score = 52.4 bits (124), Expect = 7e-07 Identities = 29/76 (38%), Positives = 43/76 (56%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E V++ N +D +L +F G+ V+V+ D TGRSRGFGFV EE ++A Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKA 247 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++GR + V Sbjct: 248 VSEMNGKEVNGRMIYV 263 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/72 (34%), Positives = 40/72 (55%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VF+ NL S+D+ L F G++ +V+ D+ SRG+GFV T E A++ + Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETQEAANRAIQTM 158 Query: 459 NGYVLDGRALKV 494 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/76 (31%), Positives = 42/76 (55%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + ++V NL +D +L F G++ +V+ + G S+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKA 349 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++ + L V Sbjct: 350 VTEMNGRIVSTKPLYV 365
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 52.4 bits (124), Expect = 7e-07 Identities = 29/72 (40%), Positives = 43/72 (59%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L FEQ G++ V+ D T RSRGFGFVT +TVE+V+ A+ Sbjct: 14 KLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAM-N 72 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 73 ARPHKVDGRVVE 84 Score = 47.0 bits (110), Expect = 3e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT V++ V Sbjct: 105 KIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIV 162
>HNRPQ_MOUSE (Q7TMK9) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) (pp68) Length = 623 Score = 52.4 bits (124), Expect = 7e-07 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FVG +P + +L LFE+AG + + ++ D LTG +RG+ FVT T E +EAV+ Sbjct: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223 Query: 459 NGY 467 N + Sbjct: 224 NNH 226 Score = 29.3 bits (64), Expect = 6.4 Identities = 19/72 (26%), Positives = 34/72 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL +V L F Q G +E V+ + D + F+ + +A+E + Sbjct: 340 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391 Query: 459 NGYVLDGRALKV 494 NG L+G +++ Sbjct: 392 NGKDLEGENIEI 403
>HNRPQ_HUMAN (O60506) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Glycine-and tyrosine-rich RNA-binding protein) (GRY-RBP) (NS1-associated protein 1) Length = 623 Score = 52.4 bits (124), Expect = 7e-07 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FVG +P + +L LFE+AG + + ++ D LTG +RG+ FVT T E +EAV+ Sbjct: 164 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 223 Query: 459 NGY 467 N + Sbjct: 224 NNH 226 Score = 29.6 bits (65), Expect = 4.9 Identities = 19/72 (26%), Positives = 34/72 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL +V L F Q G +E V+ + D + F+ + +A+E + Sbjct: 340 LFVRNLANTVTEEILEKAFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 391 Query: 459 NGYVLDGRALKV 494 NG L+G +++ Sbjct: 392 NGKDLEGENIEI 403
>HNRPQ_RAT (Q7TP47) Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q)| (hnRNP-Q) (Synaptotagmin-binding, cytoplasmic RNA-interacting protein) (Liver regeneration-related protein LRRG077) Length = 533 Score = 52.4 bits (124), Expect = 7e-07 Identities = 25/63 (39%), Positives = 39/63 (61%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FVG +P + +L LFE+AG + + ++ D LTG +RG+ FVT T E +EAV+ Sbjct: 74 IFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLY 133 Query: 459 NGY 467 N + Sbjct: 134 NNH 136 Score = 29.3 bits (64), Expect = 6.4 Identities = 19/72 (26%), Positives = 34/72 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL +V L F Q G +E V+ + D + F+ + +A+E + Sbjct: 250 LFVRNLANTVTEEILEKSFSQFGKLERVKKLKD--------YAFIHFDERDGAVKAMEEM 301 Query: 459 NGYVLDGRALKV 494 NG L+G +++ Sbjct: 302 NGKDLEGENIEI 313
>RBM28_MOUSE (Q8CGC6) RNA-binding protein 28 (RNA-binding motif protein 28)| Length = 749 Score = 52.4 bits (124), Expect = 7e-07 Identities = 27/65 (41%), Positives = 40/65 (61%) Frame = +3 Query: 273 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 L +FVG LP S S QL LF Q G V+ V+ +K + RGFG+VT S +E+V+ A++ Sbjct: 3 LTLFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK 62 Query: 453 RLNGY 467 + + Sbjct: 63 EITTF 67 Score = 39.7 bits (91), Expect = 0.005 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 +E VF+ NL F + L + +Q G ++ V V+ T S+G F T E ++ Sbjct: 321 TEGKTVFIRNLSFDSEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQK 380 Query: 444 AVERLN------GYVLDGRALKVN 497 + + G LDGR LKV+ Sbjct: 381 CLAAASPEAEGGGLKLDGRQLKVD 404
>PABP2_ARATH (P42731) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PABP 2) Length = 629 Score = 52.0 bits (123), Expect = 9e-07 Identities = 26/72 (36%), Positives = 43/72 (59%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG+L F+V +QL F Q G+V V V D +T RS G+G+V + ++ A++ L Sbjct: 38 LYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQEL 97 Query: 459 NGYVLDGRALKV 494 N L G+ ++V Sbjct: 98 NYIPLYGKPIRV 109 Score = 48.9 bits (115), Expect = 8e-06 Identities = 24/72 (33%), Positives = 43/72 (59%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D L F G++ +V D +G+S+G+GFV + E ++A+E+L Sbjct: 126 IFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEKL 184 Query: 459 NGYVLDGRALKV 494 NG +L+ + + V Sbjct: 185 NGMLLNDKQVYV 196 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++V NL S+ +L +F G+V +V+ D G S+G GFV +T EE EA+ +L Sbjct: 320 LYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDP-NGTSKGSGFVAFATPEEATEAMSQL 378 Query: 459 NGYVLDGRALKV 494 +G +++ + L V Sbjct: 379 SGKMIESKPLYV 390 Score = 43.5 bits (101), Expect = 3e-04 Identities = 24/68 (35%), Positives = 34/68 (50%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 V+V NL S L F + G + V+ D G+S+GFGFV ++ AVE L Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDG-EGKSKGFGFVNFENADDAARAVESL 275 Query: 459 NGYVLDGR 482 NG+ D + Sbjct: 276 NGHKFDDK 283
>PAB2_SCHPO (O14327) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (Poly(A)-binding protein II) (PABII) Length = 166 Score = 51.6 bits (122), Expect = 1e-06 Identities = 29/72 (40%), Positives = 40/72 (55%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 V+VGN+ +SV +L F GSV V ++ DK TG +GF ++ S V A+ L Sbjct: 57 VYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNAL-LL 115 Query: 459 NGYVLDGRALKV 494 NG +L R LKV Sbjct: 116 NGSMLHERPLKV 127
>RBMX2_HUMAN (Q9Y388) RNA-binding motif protein, X-linked 2| Length = 322 Score = 51.6 bits (122), Expect = 1e-06 Identities = 22/79 (27%), Positives = 42/79 (53%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 + + +F+G LP+ + + +F Q G + + ++ DK TG+S+GF F+ Sbjct: 32 YKDSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTI 91 Query: 441 EAVERLNGYVLDGRALKVN 497 AV+ NG + GR ++V+ Sbjct: 92 LAVDNFNGIKIKGRTIRVD 110
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 51.6 bits (122), Expect = 1e-06 Identities = 27/77 (35%), Positives = 46/77 (59%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+FVG + F + + L F Q GSV+ V+++ D+ G S+G+GFVT T E+ ++ ++ Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQE 92 Query: 456 LNGYVLDGRALKVNSGP 506 L+ + K+N GP Sbjct: 93 AE--KLNYKDKKLNIGP 107
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 51.6 bits (122), Expect = 1e-06 Identities = 27/77 (35%), Positives = 46/77 (59%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+FVG + F + + L F Q GSV+ V+++ D+ G S+G+GFVT T E+ ++ ++ Sbjct: 34 RIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFVTFETQEDAQKILQE 92 Query: 456 LNGYVLDGRALKVNSGP 506 L+ + K+N GP Sbjct: 93 AE--KLNYKDKKLNIGP 107
>DAZ1_CAEEL (Q20870) DAZ protein 1| Length = 499 Score = 51.2 bits (121), Expect = 2e-06 Identities = 28/77 (36%), Positives = 47/77 (61%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+FVG P S +L FE+ +V+ V+++ L G+S+G+GF+T T ++ EE + + Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMV-KSLDGQSKGYGFITFETEDQAEE-IRK 125 Query: 456 LNGYVLDGRALKVNSGP 506 L L+ R+ K+N GP Sbjct: 126 LTPKQLEFRSRKLNLGP 142
>TIA1_MOUSE (P52912) Nucleolysin TIA-1 (RNA-binding protein TIA-1)| Length = 386 Score = 51.2 bits (121), Expect = 2e-06 Identities = 23/77 (29%), Positives = 41/77 (53%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E A Sbjct: 104 DHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENA 163 Query: 447 VERLNGYVLDGRALKVN 497 ++++ G L GR ++ N Sbjct: 164 IQQMGGQWLGGRQIRTN 180
>EPABA_XENLA (Q98SP8) Embryonic polyadenylate-binding protein-A (Embryonic| poly(A) binding protein-A) (ePABP-A) (ePAB-A) (XePABP-A) Length = 629 Score = 50.8 bits (120), Expect = 2e-06 Identities = 28/76 (36%), Positives = 43/76 (56%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E V++ N +D +L +F G+ V+V+ D +GRSRGFGFV EE ++A Sbjct: 189 EFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKA 247 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++GR + V Sbjct: 248 VSEMNGKEVNGRMIYV 263 Score = 44.3 bits (103), Expect = 2e-04 Identities = 25/72 (34%), Positives = 40/72 (55%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VF+ NL S+D+ L F G++ +V+ D+ SRG+GFV T E A++ + Sbjct: 101 VFIKNLDESIDNKALYDTFSAFGNILSCKVVCDE--HGSRGYGFVHFETHEAANRAIQTM 158 Query: 459 NGYVLDGRALKV 494 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 42.7 bits (99), Expect = 6e-04 Identities = 24/76 (31%), Positives = 42/76 (55%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + ++V NL +D +L F G++ +V+ + G S+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG--GHSKGFGFVCFSSPEEATKA 349 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++ + L V Sbjct: 350 VTEMNGRIVSTKPLYV 365
>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)| (RNA-binding motif protein, X chromosome) Length = 388 Score = 50.8 bits (120), Expect = 2e-06 Identities = 23/73 (31%), Positives = 42/73 (57%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L + L +F + G + + ++ D+ T +SRGF FVT + + ++ Sbjct: 9 KLFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARD 68 Query: 456 LNGYVLDGRALKV 494 +NG LDG+A+KV Sbjct: 69 MNGKSLDGKAIKV 81
>TIA1_HUMAN (P31483) Nucleolysin TIA-1 isoform p40 (RNA-binding protein TIA-1)| (p40-TIA-1) [Contains: Nucleolysin TIA-1 isoform p15 (p15-TIA-1)] Length = 386 Score = 50.8 bits (120), Expect = 2e-06 Identities = 23/73 (31%), Positives = 40/73 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E A++++ Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 459 NGYVLDGRALKVN 497 G L GR ++ N Sbjct: 168 GGQWLGGRQIRTN 180
>TIAR_MOUSE (P70318) Nucleolysin TIAR (TIA-1-related protein)| Length = 392 Score = 50.4 bits (119), Expect = 3e-06 Identities = 24/78 (30%), Positives = 39/78 (50%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E Sbjct: 111 SNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAEN 170 Query: 444 AVERLNGYVLDGRALKVN 497 A+ + G L GR ++ N Sbjct: 171 AIVHMGGQWLGGRQIRTN 188
>RO32_XENLA (P51992) Heterogeneous nuclear ribonucleoprotein A3 homolog 2| (hnRNP A3(B)) Length = 385 Score = 50.4 bits (119), Expect = 3e-06 Identities = 29/72 (40%), Positives = 41/72 (56%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L FEQ G + V+ D T RSRGFGFVT S VEEV+ ++ Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMS- 86 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 87 ARPHKVDGRVVE 98 Score = 45.1 bits (105), Expect = 1e-04 Identities = 20/58 (34%), Positives = 33/58 (56%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FE G +E +EV+ D+ +G+ RGF FVT + V++ V Sbjct: 119 KIFVGGIKEDTEEYHLRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176
>EPABB_XENLA (Q6GR16) Embryonic polyadenylate-binding protein-B (Embryonic| poly(A) binding protein-B) (ePABP-B) (ePAB-B) (XePABP-B) Length = 629 Score = 50.4 bits (119), Expect = 3e-06 Identities = 28/76 (36%), Positives = 43/76 (56%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E V++ N +D +L +F G+ V+V+ D +GRSRGFGFV EE ++A Sbjct: 189 EFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKA 247 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++GR + V Sbjct: 248 VTEMNGKEVNGRMVYV 263 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/72 (34%), Positives = 39/72 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VF+ NL S+D+ L F G + +V+ D+ SRG+GFV T E A++ + Sbjct: 101 VFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG--SRGYGFVHFETQEAANRAIQTM 158 Query: 459 NGYVLDGRALKV 494 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/76 (31%), Positives = 42/76 (55%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + ++V NL +D +L F G++ +V+ + G S+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG--GHSKGFGFVCFSSPEEATKA 349 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++ + L V Sbjct: 350 VTEMNGRIVSTKPLYV 365
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 50.4 bits (119), Expect = 3e-06 Identities = 27/78 (34%), Positives = 45/78 (57%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 ++D V+VG L V L LF QAG V + D++TG+ +G+GFV + E+ + Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69 Query: 444 AVERLNGYVLDGRALKVN 497 A++ +N L G+ ++VN Sbjct: 70 AIKIMNMIKLYGKPIRVN 87 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSV-EMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 +F+GNL +D L F G + + +++ D TG S+G+ F+ ++ + + A+E Sbjct: 102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161 Query: 456 LNGYVLDGRALKVN 497 +NG L R + V+ Sbjct: 162 MNGQYLCNRPITVS 175
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 50.4 bits (119), Expect = 3e-06 Identities = 29/72 (40%), Positives = 41/72 (56%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L FEQ G + V+ D T RSRGFGFVT S VEEV+ ++ Sbjct: 28 KLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMS- 86 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 87 ARPHKVDGRVVE 98 Score = 42.7 bits (99), Expect = 6e-04 Identities = 19/58 (32%), Positives = 32/58 (55%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L E G +E +EV+ D+ +G+ RGF FVT + V++ V Sbjct: 119 KIFVGGIKEDTEEYHLRDYSESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 176
>TIAR_HUMAN (Q01085) Nucleolysin TIAR (TIA-1-related protein)| Length = 375 Score = 50.4 bits (119), Expect = 3e-06 Identities = 24/78 (30%), Positives = 39/78 (50%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S VFVG+L + + + F G + V+ D TG+S+G+GFV+ + E Sbjct: 94 SNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAEN 153 Query: 444 AVERLNGYVLDGRALKVN 497 A+ + G L GR ++ N Sbjct: 154 AIVHMGGQWLGGRQIRTN 171
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 50.1 bits (118), Expect = 3e-06 Identities = 26/77 (33%), Positives = 45/77 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+FVG + F + L F Q GSV+ V+++ D+ G S+G+GF+T T E+ ++ ++ Sbjct: 34 RIFVGGIDFKTNENDLRKFFSQYGSVKEVKIVNDR-AGVSKGYGFITFETQEDAQKILQE 92 Query: 456 LNGYVLDGRALKVNSGP 506 L+ + K+N GP Sbjct: 93 AE--KLNYKDKKLNIGP 107
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = +3 Query: 285 VGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 464 V NL + L +FE+ G V V + D+ T SRGF FV + E+A++ ++G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 465 YVLDGRALKV 494 VLDGR L+V Sbjct: 77 AVLDGRELRV 86
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = +3 Query: 285 VGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 464 V NL + L +FE+ G V V + D+ T SRGF FV + E+A++ ++G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 465 YVLDGRALKV 494 VLDGR L+V Sbjct: 77 AVLDGRELRV 86
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = +3 Query: 285 VGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 464 V NL + L +FE+ G V V + D+ T SRGF FV + E+A++ ++G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 465 YVLDGRALKV 494 VLDGR L+V Sbjct: 77 AVLDGRELRV 86
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = +3 Query: 285 VGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 464 V NL + L +FE+ G V V + D+ T SRGF FV + E+A++ ++G Sbjct: 17 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 76 Query: 465 YVLDGRALKV 494 VLDGR L+V Sbjct: 77 AVLDGRELRV 86
>HNRPD_MOUSE (Q60668) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E+ ++F+G L + L F + G V + D +TGRSRGFGFV E V++ Sbjct: 95 EEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154 Query: 447 VE----RLNGYVLDGRALK 491 ++ +LNG V+D + K Sbjct: 155 MDQKEHKLNGKVIDPKRAK 173 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FVG L ++ F G VE +E+ D T + RGF F+T E V++ +E+ Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>HNRPD_HUMAN (Q14103) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 355 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E+ ++F+G L + L F + G V + D +TGRSRGFGFV E V++ Sbjct: 95 EEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154 Query: 447 VE----RLNGYVLDGRALK 491 ++ +LNG V+D + K Sbjct: 155 MDQKEHKLNGKVIDPKRAK 173 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FVG L ++ F G VE +E+ D T + RGF F+T E V++ +E+ Sbjct: 183 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 242
>MK67I_BRARE (Q8JIY8) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| (Nucleolar phosphoprotein NOPP34-like protein) Length = 269 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/76 (35%), Positives = 40/76 (52%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG+LP + QL FEQ G V + V K TG S+G+GFV E + E + Sbjct: 47 LYVGHLPRGLFEPQLKSYFEQFGKVLRLRVSRSKKTGGSKGYGFVEFECDEVAKIVAETM 106 Query: 459 NGYVLDGRALKVNSGP 506 N Y++ R +K + P Sbjct: 107 NNYLMGERIIKCHVIP 122
>YG5B_YEAST (P53316) Hypothetical 89.5 kDa protein in MGA1-GCN4 intergenic| region Length = 781 Score = 50.1 bits (118), Expect = 3e-06 Identities = 22/73 (30%), Positives = 41/73 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FVG + S+ +L+ LF + G + +++IYDK G G+GF++ + ++ L Sbjct: 197 IFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKEL 256 Query: 459 NGYVLDGRALKVN 497 NG ++G L +N Sbjct: 257 NGRTVNGSTLFIN 269 Score = 30.0 bits (66), Expect = 3.7 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +3 Query: 396 RGFGFVTMSTVEEVEEAVERLNGYVLDGRALKVN 497 +G+GF+ + E+ A+E NG++ G L VN Sbjct: 381 KGYGFIKLINHEQALAAIETFNGFMWHGNRLVVN 414
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 50.1 bits (118), Expect = 3e-06 Identities = 28/78 (35%), Positives = 43/78 (55%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 ++D ++VG L V + L L QAG V V + D++T +GFGFV E+ + Sbjct: 10 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69 Query: 444 AVERLNGYVLDGRALKVN 497 A++ LN L G+ +KVN Sbjct: 70 AIKILNMIKLYGKPIKVN 87 Score = 45.8 bits (107), Expect = 7e-05 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMV-EVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 +FVGNL VD L F G + V +++ D +G S+GF F+ ++ E + A+E Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161 Query: 456 LNGYVLDGRALKVN 497 +NG L RA+ V+ Sbjct: 162 MNGQFLCNRAITVS 175
>HNRPD_RAT (Q9JJ54) Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0)| (AU-rich element RNA-binding protein 1) Length = 353 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E+ ++F+G L + L F + G V + D +TGRSRGFGFV E V++ Sbjct: 93 EEWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 152 Query: 447 VE----RLNGYVLDGRALK 491 ++ +LNG V+D + K Sbjct: 153 MDQKEHKLNGKVIDPKRAK 171 Score = 38.5 bits (88), Expect = 0.011 Identities = 19/60 (31%), Positives = 31/60 (51%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FVG L ++ F G VE +E+ D T + RGF F+T E V++ +E+ Sbjct: 181 KIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 240
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 50.1 bits (118), Expect = 3e-06 Identities = 26/72 (36%), Positives = 40/72 (55%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L +EQ G + V+ D + RSRGFGFVT S + EV+ A+ Sbjct: 10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMS- 68 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 69 ARPHTIDGRVVE 80 Score = 48.9 bits (115), Expect = 8e-06 Identities = 22/58 (37%), Positives = 35/58 (60%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FE+ G +E E+I DK +G+ RGFGFVT + + V++ V Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIV 158
>RT19_ARATH (P39697) 40S ribosomal protein S19, mitochondrial precursor| Length = 212 Score = 50.1 bits (118), Expect = 3e-06 Identities = 24/74 (32%), Positives = 38/74 (51%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++++G L D L F V V+ +K+TGRSRG+GFV + + A+ Sbjct: 32 KLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISA 91 Query: 456 LNGYVLDGRALKVN 497 +NG L+G + VN Sbjct: 92 MNGQELNGFNISVN 105
>LARK_DROME (Q94901) RNA-binding protein lark| Length = 352 Score = 50.1 bits (118), Expect = 3e-06 Identities = 25/73 (34%), Positives = 45/73 (61%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FVGNL + ++ LF++ G+V +++ R +GFV + V +V++A++ Sbjct: 87 KIFVGNLTDKTRAPEVRELFQKYGTVVECDIV--------RNYGFVHLDCVGDVQDAIKE 138 Query: 456 LNGYVLDGRALKV 494 LNG V+DG+ LKV Sbjct: 139 LNGRVVDGQPLKV 151 Score = 50.1 bits (118), Expect = 3e-06 Identities = 25/75 (33%), Positives = 44/75 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+GNL + +L LFE+ G+V +V+ + +GFV M T ++ +A++ Sbjct: 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVV--------KNYGFVHMETEQQGRDAIQN 59 Query: 456 LNGYVLDGRALKVNS 500 LNGY L+ A+KV + Sbjct: 60 LNGYTLNEFAIKVEA 74
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = +3 Query: 285 VGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 464 V NL + L +FE+ G V V + D+ T SRGF FV + E+A++ ++G Sbjct: 18 VDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDG 77 Query: 465 YVLDGRALKV 494 VLDGR L+V Sbjct: 78 AVLDGRELRV 87
>PABP4_HUMAN (Q13310) Polyadenylate-binding protein 4 (Poly(A)-binding protein| 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein 1) (APP-1) Length = 644 Score = 49.7 bits (117), Expect = 5e-06 Identities = 28/76 (36%), Positives = 41/76 (53%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E V++ N VD L LF Q G V+V+ D G+S+GFGFV+ E+ +A Sbjct: 189 EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDP-NGKSKGFGFVSYEKHEDANKA 247 Query: 447 VERLNGYVLDGRALKV 494 VE +NG + G+ + V Sbjct: 248 VEEMNGKEISGKIIFV 263 Score = 48.5 bits (114), Expect = 1e-05 Identities = 25/76 (32%), Positives = 44/76 (57%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + +++ NL ++D +L F GS+ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKA 349 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++ + L V Sbjct: 350 VTEMNGRIVGSKPLYV 365 Score = 45.4 bits (106), Expect = 9e-05 Identities = 24/72 (33%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VF+ NL S+D+ L F G++ +V+ D+ S+G+ FV T E ++A+E++ Sbjct: 101 VFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYAFVHFETQEAADKAIEKM 158 Query: 459 NGYVLDGRALKV 494 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170
>MYEF2_HUMAN (Q9P2K5) Myelin expression factor 2 (MyEF-2) (MST156)| Length = 600 Score = 49.7 bits (117), Expect = 5e-06 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 RVF+ N+P+ + + L E+ G V VE+ D G+SRG G V E V++A+E Sbjct: 101 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKD-AEGKSRGCGVVEFKDEEFVKKALE 159 Query: 453 RLNGYVLDGRALKVNSGP 506 +N Y L GR L + P Sbjct: 160 TMNKYDLSGRPLNIKEDP 177 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL F V +L +F AG+V+ ++ DK G+SRG G VT E +A+ Sbjct: 235 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAVQAISMF 293 Query: 459 NGYVLDGRALKV 494 NG L R + V Sbjct: 294 NGQFLFDRPMHV 305 Score = 45.4 bits (106), Expect = 9e-05 Identities = 26/77 (33%), Positives = 40/77 (51%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S+ ++FV NLPF + +L F Q G V E+ + G+S+G G V + E E+ Sbjct: 520 SKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMEN--GKSKGCGTVRFDSPESAEK 577 Query: 444 AVERLNGYVLDGRALKV 494 A +NG + GR + V Sbjct: 578 ACRIMNGIKISGREIDV 594
>MYEF2_MOUSE (Q8C854) Myelin expression factor 2 (MyEF-2) (MEF-2)| Length = 591 Score = 49.7 bits (117), Expect = 5e-06 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 RVF+ N+P+ + + L E+ G V VE+ D G+SRG G V E V++A+E Sbjct: 92 RVFISNIPYDMKWQAIKDLMREKVGEVTYVELFKD-AEGKSRGCGVVEFKDEEFVKKALE 150 Query: 453 RLNGYVLDGRALKVNSGP 506 +N Y L GR L + P Sbjct: 151 TMNKYDLSGRPLNIKEDP 168 Score = 46.2 bits (108), Expect = 5e-05 Identities = 26/77 (33%), Positives = 40/77 (51%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S+ ++FV NLPF + +L F Q G V E+ + G+S+G G V + E E+ Sbjct: 511 SKGNQIFVRNLPFDLTWQKLKEKFSQCGHVMFAEIKMEN--GKSKGCGTVRFESAESAEK 568 Query: 444 AVERLNGYVLDGRALKV 494 A +NG + GR + V Sbjct: 569 ACRIMNGIKISGREIDV 585 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL F V +L +F AG+V+ ++ DK G+SRG G VT E +A+ Sbjct: 226 IFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDK-DGKSRGMGTVTFEQAIEAVQAISMF 284 Query: 459 NGYVLDGRALKV 494 NG L R + V Sbjct: 285 NGQFLFDRPMHV 296
>HNRPM_HUMAN (P52272) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 729 Score = 49.7 bits (117), Expect = 5e-06 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 R F+ N+PF V L L E+ G V VE++ D G+SRG V E +++A E Sbjct: 71 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 129 Query: 453 RLNGYVLDGRALKVNSGP 506 LN + L GR LKV P Sbjct: 130 VLNKHSLSGRPLKVKEDP 147 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFV NL + V +L +F AG V +++ DK G+SRG G VT E +A+ Sbjct: 205 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGTVTFEQSIEAVQAISMF 263 Query: 459 NGYVLDGRALKV 494 NG +L R + V Sbjct: 264 NGQLLFDRPMHV 275 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/73 (32%), Positives = 35/73 (47%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FV NLPF L F + G V ++ + G+S+G G V + E E A Sbjct: 653 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 710 Query: 456 LNGYVLDGRALKV 494 +NG L GR + V Sbjct: 711 MNGMKLSGREIDV 723
>HNRPM_RAT (Q62826) Heterogeneous nuclear ribonucleoprotein M (hnRNP M) (M4| protein) Length = 689 Score = 49.7 bits (117), Expect = 5e-06 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 R F+ N+PF V L L E+ G V VE++ D G+SRG V E +++A E Sbjct: 70 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 128 Query: 453 RLNGYVLDGRALKVNSGP 506 LN + L GR LKV P Sbjct: 129 VLNKHSLSGRPLKVKEDP 146 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFV NL + V +L +F AG V +++ DK G+SRG G VT E +A+ Sbjct: 165 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGTVTFEQSIEAVQAISMF 223 Query: 459 NGYVLDGRALKV 494 NG +L R + V Sbjct: 224 NGQLLFDRPMHV 235 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/73 (32%), Positives = 35/73 (47%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FV NLPF L F + G V ++ + G+S+G G V + E E A Sbjct: 613 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 670 Query: 456 LNGYVLDGRALKV 494 +NG L GR + V Sbjct: 671 MNGMKLSGREIDV 683
>HNRPM_MOUSE (Q9D0E1) Heterogeneous nuclear ribonucleoprotein M (hnRNP M)| Length = 728 Score = 49.7 bits (117), Expect = 5e-06 Identities = 31/78 (39%), Positives = 41/78 (52%), Gaps = 1/78 (1%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLF-EQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 R F+ N+PF V L L E+ G V VE++ D G+SRG V E +++A E Sbjct: 70 RAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDA-EGKSRGCAVVEFKMEESMKKAAE 128 Query: 453 RLNGYVLDGRALKVNSGP 506 LN + L GR LKV P Sbjct: 129 VLNKHSLSGRPLKVKEDP 146 Score = 47.0 bits (110), Expect = 3e-05 Identities = 27/72 (37%), Positives = 38/72 (52%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFV NL + V +L +F AG V +++ DK G+SRG G VT E +A+ Sbjct: 204 VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDK-DGKSRGIGIVTFEQSIEAVQAISMF 262 Query: 459 NGYVLDGRALKV 494 NG +L R + V Sbjct: 263 NGQLLFDRPMHV 274 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/73 (32%), Positives = 35/73 (47%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FV NLPF L F + G V ++ + G+S+G G V + E E A Sbjct: 652 QIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMEN--GKSKGCGVVKFESPEVAERACRM 709 Query: 456 LNGYVLDGRALKV 494 +NG L GR + V Sbjct: 710 MNGMKLSGREIDV 722
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 49.7 bits (117), Expect = 5e-06 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L +EQ G++ V+ D + RSRGFGFVT S + EV+ A+ Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAM-A 68 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 69 TRPHTIDGRVVE 80 Score = 46.2 bits (108), Expect = 5e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FE+ G ++ +E+I DK +G+ RGF FVT + V++ V Sbjct: 101 KLFVGGIKEDTEEHHLREYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIV 158
>ROA3_HUMAN (P51991) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 378 Score = 49.3 bits (116), Expect = 6e-06 Identities = 29/72 (40%), Positives = 42/72 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L FE+ G++ V+ D T RSRGFGFVT S VEEV+ A+ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM-C 94 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 95 ARPHKVDGRVVE 106 Score = 46.2 bits (108), Expect = 5e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FE+ G +E +EV+ D+ +G+ RGF FVT + V++ V Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>PABP_SCHPO (P31209) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 653 Score = 49.3 bits (116), Expect = 6e-06 Identities = 26/76 (34%), Positives = 44/76 (57%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + +F+ NL VD +L F G++ +++ D+ G+S+GFGFV +T EE +A Sbjct: 362 QGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDE-QGKSKGFGFVCYTTPEEANKA 420 Query: 447 VERLNGYVLDGRALKV 494 V +N +L G+ L V Sbjct: 421 VTEMNQRMLAGKPLYV 436 Score = 46.2 bits (108), Expect = 5e-05 Identities = 24/72 (33%), Positives = 41/72 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VF+ NL ++D+ L F G + +V D+L G ++G+GFV +VE A+E + Sbjct: 170 VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDEL-GNAKGYGFVHFDSVESANAAIEHV 228 Query: 459 NGYVLDGRALKV 494 NG +L+ + + V Sbjct: 229 NGMLLNDKKVYV 240 Score = 40.8 bits (94), Expect = 0.002 Identities = 22/72 (30%), Positives = 38/72 (52%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 V++ NL + + + LF Q G + + ++ D+ + RGFGFV + E ++AV+ L Sbjct: 263 VYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQ-NDKPRGFGFVNYANHECAQKAVDEL 321 Query: 459 NGYVLDGRALKV 494 N G+ L V Sbjct: 322 NDKEYKGKKLYV 333
>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)| Length = 419 Score = 49.3 bits (116), Expect = 6e-06 Identities = 23/74 (31%), Positives = 43/74 (58%) Frame = +3 Query: 273 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 +++FVGNL + + ++ LF Q G + +++ + FGFV M + E +EA++ Sbjct: 2 VKIFVGNLSPNTTAEEIRSLFSQYGKISECDIV--------KNFGFVHMDSKSEADEAIQ 53 Query: 453 RLNGYVLDGRALKV 494 L+ Y+L+G A+ V Sbjct: 54 NLHHYMLNGMAMNV 67 Score = 35.4 bits (80), Expect = 0.089 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++ VGN+ S + +L FE+ G V +++ D + FV M VE+ EA+ Sbjct: 79 KLHVGNISSSCTNQELRAKFEEYGPVVECDIVKD--------YAFVHMERVEDAMEAISG 130 Query: 456 LNGYVLDGRALKV 494 L+ G+ + V Sbjct: 131 LDNTAFQGKLMSV 143
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 49.3 bits (116), Expect = 6e-06 Identities = 23/63 (36%), Positives = 39/63 (61%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFVG +P + +L LFE+AG + + ++ D L+G++RG+ F+T E +EAV+ Sbjct: 167 VFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQEAVKLC 226 Query: 459 NGY 467 + Y Sbjct: 227 DSY 229
>PABP1_HUMAN (P11940) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 49.3 bits (116), Expect = 6e-06 Identities = 26/76 (34%), Positives = 46/76 (60%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E V++ N +D +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKA 247 Query: 447 VERLNGYVLDGRALKV 494 V+ +NG L+G+ + V Sbjct: 248 VDEMNGKELNGKQIYV 263 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A+E++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 459 NGYVLDGRALKV 494 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 45.8 bits (107), Expect = 7e-05 Identities = 25/76 (32%), Positives = 43/76 (56%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++ + L V Sbjct: 350 VTEMNGRIVATKPLYV 365
>PABP1_BOVIN (P61286) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 49.3 bits (116), Expect = 6e-06 Identities = 26/76 (34%), Positives = 46/76 (60%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E V++ N +D +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKA 247 Query: 447 VERLNGYVLDGRALKV 494 V+ +NG L+G+ + V Sbjct: 248 VDEMNGKELNGKQIYV 263 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A+E++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 459 NGYVLDGRALKV 494 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 45.8 bits (107), Expect = 7e-05 Identities = 25/76 (32%), Positives = 43/76 (56%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++ + L V Sbjct: 350 VTEMNGRIVATKPLYV 365
>ROA3_RAT (Q6URK4) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 49.3 bits (116), Expect = 6e-06 Identities = 29/72 (40%), Positives = 42/72 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L FE+ G++ V+ D T RSRGFGFVT S VEEV+ A+ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM-C 94 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 95 ARPHKVDGRVVE 106 Score = 46.2 bits (108), Expect = 5e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FE+ G +E +EV+ D+ +G+ RGF FVT + V++ V Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>ROA3_MOUSE (Q8BG05) Heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3)| Length = 379 Score = 49.3 bits (116), Expect = 6e-06 Identities = 29/72 (40%), Positives = 42/72 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L FE+ G++ V+ D T RSRGFGFVT S VEEV+ A+ Sbjct: 36 KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAM-C 94 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 95 ARPHKVDGRVVE 106 Score = 46.2 bits (108), Expect = 5e-05 Identities = 20/58 (34%), Positives = 34/58 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FE+ G +E +EV+ D+ +G+ RGF FVT + V++ V Sbjct: 127 KIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIV 184
>PABP3_ARATH (O64380) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) Length = 660 Score = 49.3 bits (116), Expect = 6e-06 Identities = 24/72 (33%), Positives = 43/72 (59%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L F G++ +V D +TGRS+G+GFV E + A+++L Sbjct: 138 IFIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKL 196 Query: 459 NGYVLDGRALKV 494 NG +++ + + V Sbjct: 197 NGMLMNDKQVFV 208 Score = 46.2 bits (108), Expect = 5e-05 Identities = 26/77 (33%), Positives = 43/77 (55%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S+ +++ NL SVD +L +F + G+V +V+ + G SRGFGFV S EE Sbjct: 329 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNP-QGMSRGFGFVAYSNPEEALR 387 Query: 444 AVERLNGYVLDGRALKV 494 A+ +NG ++ + L + Sbjct: 388 ALSEMNGKMIGRKPLYI 404 Score = 42.7 bits (99), Expect = 6e-04 Identities = 26/72 (36%), Positives = 36/72 (50%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 V+V NLP + +L F + G + V+ D+ +G SR FGFV E AVE++ Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAAASAVEKM 289 Query: 459 NGYVLDGRALKV 494 NG L L V Sbjct: 290 NGISLGDDVLYV 301
>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly| U-binding splicing factor) (Protein half pint) (PUF60 homolog) Length = 637 Score = 48.9 bits (115), Expect = 8e-06 Identities = 22/73 (30%), Positives = 42/73 (57%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 RV+VG++ F + + F G ++ + + +D +T + +GF FV E + A+E+ Sbjct: 131 RVYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQ 190 Query: 456 LNGYVLDGRALKV 494 +NG ++ GR +KV Sbjct: 191 MNGALMGGRNIKV 203 Score = 33.9 bits (76), Expect = 0.26 Identities = 15/73 (20%), Positives = 37/73 (50%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R++V ++ + + +FE G + ++ +G+GF+ + + ++EA+ Sbjct: 228 RIYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIAS 287 Query: 456 LNGYVLDGRALKV 494 +N + L G+ L+V Sbjct: 288 MNLFDLGGQLLRV 300
>ROA2_MOUSE (O88569) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 341 Score = 48.9 bits (115), Expect = 8e-06 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L +EQ G + V+ D + RSRGFGFVT S++ EV+ A+ Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM-A 68 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 69 ARPHSIDGRVVE 80 Score = 47.8 bits (112), Expect = 2e-05 Identities = 20/58 (34%), Positives = 35/58 (60%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FE+ G ++ +E+I D+ +G+ RGFGFVT + V++ V Sbjct: 101 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 158
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 48.9 bits (115), Expect = 8e-06 Identities = 26/77 (33%), Positives = 39/77 (50%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 +E R+FV NLP++ L LF + G + + D LT + +GF F+T E + Sbjct: 399 AESGRLFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVK 458 Query: 444 AVERLNGYVLDGRALKV 494 A ++G V GR L V Sbjct: 459 AYSEVDGQVFQGRMLHV 475 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGR---SRGFGFVTMSTVEEVEEAV 449 +F+ NL F +L +F + G+V+ + K S GFGFV E+ ++A+ Sbjct: 732 LFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKAL 791 Query: 450 ERLNGYVLDGRALKV 494 ++L G+V+DG L+V Sbjct: 792 KQLQGHVVDGHKLEV 806 Score = 36.6 bits (83), Expect = 0.040 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKL-TGRSRGFGFVTMSTVEEVEEAVE 452 ++ V N+PF S ++ LF G ++ V + TG RGFGFV T ++ + A Sbjct: 833 KILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFN 892 Query: 453 RL 458 L Sbjct: 893 AL 894
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 48.9 bits (115), Expect = 8e-06 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L +EQ G + V+ D + RSRGFGFVT S++ EV+ A+ Sbjct: 22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAM-A 80 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 81 ARPHSIDGRVVE 92 Score = 47.8 bits (112), Expect = 2e-05 Identities = 20/58 (34%), Positives = 35/58 (60%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FE+ G ++ +E+I D+ +G+ RGFGFVT + V++ V Sbjct: 113 KLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIV 170
>PABP1_RAT (Q9EPH8) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 48.9 bits (115), Expect = 8e-06 Identities = 26/76 (34%), Positives = 46/76 (60%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E V++ N +D +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKA 247 Query: 447 VERLNGYVLDGRALKV 494 V+ +NG L+G+ + V Sbjct: 248 VDEMNGKELNGKQIYV 263 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A+E++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 459 NGYVLDGRALKV 494 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 45.8 bits (107), Expect = 7e-05 Identities = 25/76 (32%), Positives = 43/76 (56%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++ + L V Sbjct: 350 VTEMNGRIVATKPLYV 365
>PABP1_MOUSE (P29341) Polyadenylate-binding protein 1 (Poly(A)-binding protein| 1) (PABP 1) Length = 636 Score = 48.9 bits (115), Expect = 8e-06 Identities = 26/76 (34%), Positives = 46/76 (60%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E V++ N +D +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKA 247 Query: 447 VERLNGYVLDGRALKV 494 V+ +NG L+G+ + V Sbjct: 248 VDEMNGKELNGKQIYV 263 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A+E++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIEKM 158 Query: 459 NGYVLDGRALKV 494 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 45.8 bits (107), Expect = 7e-05 Identities = 25/76 (32%), Positives = 43/76 (56%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++ + L V Sbjct: 350 VTEMNGRIVATKPLYV 365
>NGR1_YEAST (P32831) Negative growth regulatory protein NGR1 (RNA-binding| protein RBP1) Length = 672 Score = 48.9 bits (115), Expect = 8e-06 Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFE-QAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + +FVG+L + A L LF+ + SV+ V V+ D LTG SR FGFV +E A Sbjct: 191 EFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRA 250 Query: 447 VERLNGYVLDGRALKV 494 + ++G GRAL+V Sbjct: 251 LIEMSGKWFQGRALRV 266 Score = 31.2 bits (69), Expect = 1.7 Identities = 19/75 (25%), Positives = 34/75 (45%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFVG L QL LF+ G + V + + GFV + E +++ L Sbjct: 362 VFVGGLVPKTTEFQLRSLFKPFGPILNVRI------PNGKNCGFVKFEKRIDAEASIQGL 415 Query: 459 NGYVLDGRALKVNSG 503 G+++ G ++++ G Sbjct: 416 QGFIVGGSPIRLSWG 430
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 48.9 bits (115), Expect = 8e-06 Identities = 25/72 (34%), Positives = 45/72 (62%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 V++ N +D +L LF + G V+V+ D+ +G+S+GFGFV+ E+ ++AV+ + Sbjct: 193 VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 459 NGYVLDGRALKV 494 NG L+G+ + V Sbjct: 252 NGKELNGKQIYV 263 Score = 46.2 bits (108), Expect = 5e-05 Identities = 25/74 (33%), Positives = 42/74 (56%) Frame = +3 Query: 273 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +AV Sbjct: 294 VNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVT 351 Query: 453 RLNGYVLDGRALKV 494 +NG ++ + L V Sbjct: 352 EMNGRIVATKPLYV 365 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/72 (33%), Positives = 41/72 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NL S+++ L G++ V+ D+ S+G+GFV T E E A++++ Sbjct: 101 IFVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKM 158 Query: 459 NGYVLDGRALKV 494 NG +L+GR + V Sbjct: 159 NGMLLNGRKVFV 170
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 48.5 bits (114), Expect = 1e-05 Identities = 24/74 (32%), Positives = 42/74 (56%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E ++F+G L + L F + G+V ++++ D TGRSRGFGF++ V+E Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 216 Query: 447 VERLNGYVLDGRAL 488 V+ ++LDG+ + Sbjct: 217 VK--TQHILDGKVI 228 Score = 43.1 bits (100), Expect = 4e-04 Identities = 20/59 (33%), Positives = 34/59 (57%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++FVG + V + F Q G++ +++ DK TG+SRGFGFVT + + V+ + Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQ 302
>PABPB_XENLA (Q6IP09) Polyadenylate-binding protein 1-B (Poly(A)-binding protein| 1-B) (Cytoplasmic poly(A)-binding protein 1-B) (PABP-B) (PABP 1-B) (xPABP1-B) Length = 633 Score = 48.5 bits (114), Expect = 1e-05 Identities = 28/76 (36%), Positives = 45/76 (59%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E V++ N +D +L F Q G+ V+V+ D G+SRGFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDD-HGKSRGFGFVSFERHEDAQKA 247 Query: 447 VERLNGYVLDGRALKV 494 V+ +NG L+G+A+ V Sbjct: 248 VDDMNGKDLNGKAIFV 263 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/72 (33%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A++++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKM 158 Query: 459 NGYVLDGRALKV 494 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 46.6 bits (109), Expect = 4e-05 Identities = 26/76 (34%), Positives = 43/76 (56%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + ++V NL +D +L F GS+ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++ + L V Sbjct: 350 VTEMNGRIVATKPLYV 365
>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4| (RNA-binding protein srp-2) (CeSC35) Length = 196 Score = 48.5 bits (114), Expect = 1e-05 Identities = 24/70 (34%), Positives = 39/70 (55%) Frame = +3 Query: 285 VGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 464 + NL + L FE+ G + V + DK + +S+GFGFV + E A++R +G Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82 Query: 465 YVLDGRALKV 494 ++DGR L+V Sbjct: 83 KLVDGRELRV 92
>PABPX_ARATH (Q9ZQA8) Probable polyadenylate-binding protein At2g36660| (Poly(A)-binding protein At2g36660) (PABP) Length = 609 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/72 (34%), Positives = 43/72 (59%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++V N+ +V +L F Q G++ +++ D+ G+S+GFGFV ST EE +AV+ Sbjct: 306 IYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDE-KGKSKGFGFVCFSTPEEAIDAVKTF 364 Query: 459 NGYVLDGRALKV 494 +G + G+ L V Sbjct: 365 HGQMFHGKPLYV 376 Score = 42.4 bits (98), Expect = 7e-04 Identities = 24/72 (33%), Positives = 41/72 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VFV NLP SV +A L +F++ G++ +V + G+SRG+GFV + A++ L Sbjct: 114 VFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLE-DGKSRGYGFVQFEQEDAAHAAIQTL 172 Query: 459 NGYVLDGRALKV 494 N ++ + + V Sbjct: 173 NSTIVADKEIYV 184 Score = 37.4 bits (85), Expect = 0.023 Identities = 20/72 (27%), Positives = 39/72 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG+L SV L F + S+ V + D +GRS +G+ + ++ A+E+ Sbjct: 26 LYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKK 85 Query: 459 NGYVLDGRALKV 494 N +L+G+ ++V Sbjct: 86 NNSLLNGKMIRV 97 Score = 28.9 bits (63), Expect = 8.3 Identities = 18/72 (25%), Positives = 30/72 (41%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NL V L F + G + + + D+ RG+ FV E+ A E + Sbjct: 203 LYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDE-NRLCRGYAFVNFDNPEDARRAAETV 261 Query: 459 NGYVLDGRALKV 494 NG + L V Sbjct: 262 NGTKFGSKCLYV 273
>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)| Length = 429 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/74 (36%), Positives = 42/74 (56%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 V V NLP SV+ L +F++ G+V +V D G S G G V+ ++++ A+E+ Sbjct: 238 VIVKNLPASVNWQALKDIFKECGNVAHADVELDG-DGVSTGSGTVSFYDIKDLHRAIEKY 296 Query: 459 NGYVLDGRALKVNS 500 NGY ++G L V S Sbjct: 297 NGYSIEGNVLDVKS 310 Score = 45.8 bits (107), Expect = 7e-05 Identities = 25/73 (34%), Positives = 35/73 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++ NLPFS + L LFE G V E+ YD G G V V++ + +ERL Sbjct: 353 IYCSNLPFSTAKSDLYDLFETIGKVNNAELRYDS-KGAPTGIAVVEYDNVDDADVCIERL 411 Query: 459 NGYVLDGRALKVN 497 N Y G L ++ Sbjct: 412 NNYNYGGCDLDIS 424 Score = 38.1 bits (87), Expect = 0.014 Identities = 19/62 (30%), Positives = 31/62 (50%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FVGNL + L F Q G V ++I + G RG G V + ++V+ A+ + Sbjct: 138 IFVGNLTYDSTPEDLTEFFSQIGKVVRADIITSR--GHHRGMGTVEFTNSDDVDRAIRQY 195 Query: 459 NG 464 +G Sbjct: 196 DG 197
>PABP5_ARATH (Q05196) Polyadenylate-binding protein 5 (Poly(A)-binding protein| 5) (PABP 5) Length = 668 Score = 48.1 bits (113), Expect = 1e-05 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VF+ NL S+D+ L F G++ +V D + GRS+G+GFV E + A+++L Sbjct: 134 VFIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKL 192 Query: 459 NGYVLDGRALKV 494 NG +L+ + + V Sbjct: 193 NGMLLNDKQVFV 204 Score = 42.7 bits (99), Expect = 6e-04 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NL SV+ +L +F + G+V +V+ + G SRGFGFV S EE A++ + Sbjct: 330 LYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNS-QGLSRGFGFVAYSNPEEALLAMKEM 388 Query: 459 NGYVLDGRALKV 494 NG ++ + L V Sbjct: 389 NGKMIGRKPLYV 400 Score = 42.7 bits (99), Expect = 6e-04 Identities = 26/72 (36%), Positives = 37/72 (51%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 V+V NLP + +L F + G + V+ D+ +G SR FGFV + E AVE++ Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVEKM 285 Query: 459 NGYVLDGRALKV 494 NG L L V Sbjct: 286 NGISLGEDVLYV 297
>MSI2H_HUMAN (Q96DH6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 328 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/59 (40%), Positives = 33/59 (55%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++FVG L + + FEQ G VE +++DK T R RGFGFVT + VE+ E Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169 Score = 39.7 bits (91), Expect = 0.005 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++F+G L + L F + G + V+ D T RSRGFGFVT + V++ + Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 79
>DAZP1_HUMAN (Q96EP5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 407 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/62 (37%), Positives = 36/62 (58%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S+ ++FVG +P + +L F++ G V V +IYD R RGFGF+T + V++ Sbjct: 110 SKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 169 Query: 444 AV 449 AV Sbjct: 170 AV 171 Score = 40.4 bits (93), Expect = 0.003 Identities = 26/69 (37%), Positives = 33/69 (47%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FVG L +S L F Q G V ++ DK T +SRGFGFV V V Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV-GTVLA 69 Query: 456 LNGYVLDGR 482 + LDGR Sbjct: 70 SRPHTLDGR 78
>MSI2H_MOUSE (Q920Q6) RNA-binding protein Musashi homolog 2 (Musashi-2)| Length = 346 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/59 (40%), Positives = 33/59 (55%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++FVG L + + FEQ G VE +++DK T R RGFGFVT + VE+ E Sbjct: 111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCE 169 Score = 39.7 bits (91), Expect = 0.005 Identities = 19/58 (32%), Positives = 30/58 (51%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++F+G L + L F + G + V+ D T RSRGFGFVT + V++ + Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVL 79
>MSI1H_RAT (Q8K3P4) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/59 (38%), Positives = 34/59 (57%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++FVG L + + FEQ G V+ +++DK T R RGFGFVT + + VE+ E Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168 Score = 40.8 bits (94), Expect = 0.002 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L + L F Q G V+ V+ D LT RSRGFGFVT V++ + + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 456 LNGYVLDGRAL 488 + + LD + + Sbjct: 81 -SRHELDSKTI 90
>MSI1H_MOUSE (Q61474) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/59 (38%), Positives = 34/59 (57%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++FVG L + + FEQ G V+ +++DK T R RGFGFVT + + VE+ E Sbjct: 110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168 Score = 40.8 bits (94), Expect = 0.002 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L + L F Q G V+ V+ D LT RSRGFGFVT V++ + + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 456 LNGYVLDGRAL 488 + + LD + + Sbjct: 81 -SRHELDSKTI 90
>MSI1H_HUMAN (O43347) RNA-binding protein Musashi homolog 1 (Musashi-1)| Length = 362 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/59 (38%), Positives = 34/59 (57%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++FVG L + + FEQ G V+ +++DK T R RGFGFVT + + VE+ E Sbjct: 110 KIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 168 Score = 40.8 bits (94), Expect = 0.002 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L + L F Q G V+ V+ D LT RSRGFGFVT V++ + + Sbjct: 21 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80 Query: 456 LNGYVLDGRAL 488 + + LD + + Sbjct: 81 -SRHELDSKTI 90
>DAZP1_MOUSE (Q9JII5) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) Length = 406 Score = 47.8 bits (112), Expect = 2e-05 Identities = 23/62 (37%), Positives = 36/62 (58%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S+ ++FVG +P + +L F++ G V V +IYD R RGFGF+T + V++ Sbjct: 110 SKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 169 Query: 444 AV 449 AV Sbjct: 170 AV 171 Score = 40.4 bits (93), Expect = 0.003 Identities = 26/69 (37%), Positives = 33/69 (47%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FVG L +S L F Q G V ++ DK T +SRGFGFV V V Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV-GTVLA 69 Query: 456 LNGYVLDGR 482 + LDGR Sbjct: 70 SRPHTLDGR 78
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 47.8 bits (112), Expect = 2e-05 Identities = 26/72 (36%), Positives = 40/72 (55%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L + L FEQ G + V V+ D T RSRGFGF+T S V++A + Sbjct: 18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDA-QN 76 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 77 ARPHKVDGRVVE 88 Score = 37.7 bits (86), Expect = 0.018 Identities = 17/56 (30%), Positives = 30/56 (53%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 ++FVG + ++ L F+Q G+V ++ DK T + RGF FV + V++ Sbjct: 109 KLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDK 164
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/72 (34%), Positives = 42/72 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L + L FE+ G++ V V+ D T RSRGFGF+T S ++EA ++ Sbjct: 32 KLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEA-QK 90 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 91 SRPHKIDGRVVE 102 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV-- 449 ++FVG L D + F+ G++ + ++ DK TG+ RGF FV + V++ V Sbjct: 123 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ 182 Query: 450 --ERLNGYVLD 476 +LNG ++D Sbjct: 183 KQHQLNGKMVD 193
>MRD1_USTMA (Q4PC17) Multiple RNA-binding domain-containing protein 1| Length = 858 Score = 47.8 bits (112), Expect = 2e-05 Identities = 25/74 (33%), Positives = 36/74 (48%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E R+F+ NLPF+ ++ FE G+V+ V + DK T S+G FV+ S A Sbjct: 312 ESGRLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKGLAFVSFSDPAHALAA 371 Query: 447 VERLNGYVLDGRAL 488 +G GR L Sbjct: 372 YRAKDGSTFQGRLL 385 Score = 45.8 bits (107), Expect = 7e-05 Identities = 26/71 (36%), Positives = 36/71 (50%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++ + NLPF + LF G ++ V + K +RGFGFV STV E + A+E Sbjct: 720 KILIKNLPFEATKRDIRDLFSSQGQLKSVR-LPKKFDNTTRGFGFVEYSTVREAQSAMEA 778 Query: 456 LNGYVLDGRAL 488 L L GR L Sbjct: 779 LKHTHLLGRHL 789 Score = 30.0 bits (66), Expect = 3.7 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 5/77 (6%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGR-----SRGFGFVTMSTVEEVEE 443 ++V NL FS +L F + R S G+GFV +++ Sbjct: 623 LYVKNLSFSTTDERLTAFFHGLSDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDAART 682 Query: 444 AVERLNGYVLDGRALKV 494 A + ++G VLD L V Sbjct: 683 AQKAMDGKVLDAHTLVV 699
>RBM11_HUMAN (P57052) Putative RNA-binding protein 11 (RNA-binding motif protein| 11) Length = 281 Score = 47.4 bits (111), Expect = 2e-05 Identities = 31/75 (41%), Positives = 38/75 (50%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D VFVGNL V L LF QAG + V + D+ G+ + FGFV E V A+ Sbjct: 9 DRTVFVGNLEARVREEILYELFLQAGPLTKVTICKDR-EGKPKSFGFVCFKHPESVSYAI 67 Query: 450 ERLNGYVLDGRALKV 494 LNG L GR + V Sbjct: 68 ALLNGIRLYGRPINV 82
>PABP_YEAST (P04147) Polyadenylate-binding protein, cytoplasmic and nuclear| (Poly(A)-binding protein) (PABP) (ARS consensus-binding protein ACBP-67) (Polyadenylate tail-binding protein) Length = 576 Score = 47.4 bits (111), Expect = 2e-05 Identities = 27/76 (35%), Positives = 43/76 (56%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + +FV NL SVD +L F G++ +V+ + G+S+GFGFV ST EE +A Sbjct: 319 QGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTE-NGKSKGFGFVCFSTPEEATKA 377 Query: 447 VERLNGYVLDGRALKV 494 + N ++ G+ L V Sbjct: 378 ITEKNQQIVAGKPLYV 393 Score = 45.8 bits (107), Expect = 7e-05 Identities = 24/72 (33%), Positives = 39/72 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG+L SV A L +F GSV + V D +T S G+ +V + E +A+E+L Sbjct: 39 LYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQL 98 Query: 459 NGYVLDGRALKV 494 N + GR ++ Sbjct: 99 NYTPIKGRLCRI 110 Score = 43.9 bits (102), Expect = 3e-04 Identities = 23/72 (31%), Positives = 40/72 (55%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL +D+ L F G + ++ D+ G+S+GFGFV +EA++ L Sbjct: 127 IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDAL 185 Query: 459 NGYVLDGRALKV 494 NG +L+G+ + V Sbjct: 186 NGMLLNGQEIYV 197 Score = 35.8 bits (81), Expect = 0.068 Identities = 23/72 (31%), Positives = 34/72 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++V N+ Q LF + G + + D G+ +GFGFV E+ +AVE L Sbjct: 220 LYVKNINSETTDEQFQELFAKFGPIVSASLEKDA-DGKLKGFGFVNYEKHEDAVKAVEAL 278 Query: 459 NGYVLDGRALKV 494 N L+G L V Sbjct: 279 NDSELNGEKLYV 290
>RBY1A_HUMAN (Q15414) RNA-binding motif protein, Y chromosome, family 1 member| A1 (RNA-binding motif protein 1) Length = 496 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/73 (32%), Positives = 41/73 (56%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L + L +F + G + V +I D+ T +SRGF F+T + + A + Sbjct: 9 KLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDR-TSKSRGFAFITFENPADAKNAAKD 67 Query: 456 LNGYVLDGRALKV 494 +NG L G+A+KV Sbjct: 68 MNGKSLHGKAIKV 80
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 47.4 bits (111), Expect = 2e-05 Identities = 20/58 (34%), Positives = 35/58 (60%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG + + L FEQ G +E++E++ D+ +G+ RGF FVT + V++ V Sbjct: 106 KIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIV 163 Score = 45.8 bits (107), Expect = 7e-05 Identities = 26/72 (36%), Positives = 41/72 (56%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L F L FEQ G++ V+ D + RSRGFGFVT + +EV+ A+ Sbjct: 15 KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAM-T 73 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 74 ARPHKVDGRVVE 85
>ACF_RAT (Q923K9) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S +E + A+++L Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKQEAKNAIKQL 116 Query: 459 NGY-VLDGRALKV 494 N Y + +GR L V Sbjct: 117 NNYEIRNGRLLGV 129 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFE--QAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++V NL S + F + G+VE V+ I D + FV S E+ EA++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNSIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 453 RLNGYVLDGRALKV 494 LNG VLDG ++V Sbjct: 285 ALNGKVLDGSPIEV 298
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 47.0 bits (110), Expect = 3e-05 Identities = 23/62 (37%), Positives = 34/62 (54%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S ++FVG +P + +L F + G V V +IYD R RGFGF+T + V++ Sbjct: 111 SRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQ 170 Query: 444 AV 449 AV Sbjct: 171 AV 172 Score = 40.4 bits (93), Expect = 0.003 Identities = 26/69 (37%), Positives = 33/69 (47%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FVG L +S L F Q G V ++ DK T +SRGFGFV V V Sbjct: 11 KLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCV-GTVLA 69 Query: 456 LNGYVLDGR 482 + LDGR Sbjct: 70 SRPHTLDGR 78
>SGN1_YEAST (P40561) RNA-binding protein SGN1| Length = 250 Score = 47.0 bits (110), Expect = 3e-05 Identities = 22/73 (30%), Positives = 43/73 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FVGN+ V Q+ F+ G ++ + ++YD+ TG +G+G++ + E+A++ L Sbjct: 66 IFVGNITPDVTPEQIEDHFKDCGQIKRITLLYDRNTGTPKGYGYIEFESPAYREKALQ-L 124 Query: 459 NGYVLDGRALKVN 497 NG L G+ + V+ Sbjct: 125 NGGELKGKKIAVS 137
>PABPA_XENLA (P20965) Polyadenylate-binding protein 1-A (Poly(A)-binding protein| 1-A) (Cytoplasmic poly(A)-binding protein 1-A) (PABP-A) (PABP 1-A) (xPABP1-A) Length = 633 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/72 (33%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+ NL S+D+ L F G++ +V+ D+ S+G+GFV T E E A++++ Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDE--NGSKGYGFVHFETQEAAERAIDKM 158 Query: 459 NGYVLDGRALKV 494 NG +L+ R + V Sbjct: 159 NGMLLNDRKVFV 170 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/76 (32%), Positives = 43/76 (56%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + + ++V NL +D +L F G++ +V+ + GRS+GFGFV S+ EE +A Sbjct: 292 QGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKA 349 Query: 447 VERLNGYVLDGRALKV 494 V +NG ++ + L V Sbjct: 350 VTEMNGRIVATKPLYV 365 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/76 (30%), Positives = 45/76 (59%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E V++ N ++ +L +F + G V+V+ D G+S+GFGFV+ E+ ++A Sbjct: 189 EFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKA 247 Query: 447 VERLNGYVLDGRALKV 494 V+ +NG ++G+++ V Sbjct: 248 VDEMNGKDMNGKSMFV 263
>YNL0_YEAST (P53927) Hypothetical 25.4 kDa protein in CYB5-LEU4 intergenic| region Length = 220 Score = 47.0 bits (110), Expect = 3e-05 Identities = 25/76 (32%), Positives = 39/76 (51%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++V LP +L+ F Q G ++ V + +K TG SR +GF+ E+ A E + Sbjct: 93 IYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESM 152 Query: 459 NGYVLDGRALKVNSGP 506 N Y+L G L+V P Sbjct: 153 NNYLLMGHLLQVRVLP 168
>MRD1_CANAL (Q5AJS6) Multiple RNA-binding domain-containing protein 1| Length = 841 Score = 47.0 bits (110), Expect = 3e-05 Identities = 22/73 (30%), Positives = 36/73 (49%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+F+ N+ + LF Q G++E V + D TG+S+GF +V E+ A Sbjct: 311 RLFIRNISYEASEEDFRSLFSQYGALEEVHIAIDTRTGKSKGFLYVQFLKKEDATRAYRS 370 Query: 456 LNGYVLDGRALKV 494 L+ + GR L + Sbjct: 371 LDKQIFQGRLLHI 383 Score = 41.6 bits (96), Expect = 0.001 Identities = 25/71 (35%), Positives = 36/71 (50%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++ + NLPF L LF G ++ V V K +RGF FV + ++E E A+ + Sbjct: 718 KIIIKNLPFEATRKDLLELFGAFGQLKSVRVP-KKFDQSARGFAFVEFNLMKEAETAMSQ 776 Query: 456 LNGYVLDGRAL 488 L G L GR L Sbjct: 777 LEGVHLLGRRL 787 Score = 40.8 bits (94), Expect = 0.002 Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 5/77 (6%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGS--VEMVEVIYD-KLTGR--SRGFGFVTMSTVEEVEE 443 VFV NL F+ L+ LF+ V V+ D K +G+ S GFGFV T E+ Sbjct: 619 VFVKNLNFATTVQALSDLFKPLPGFVVATVKTKPDPKNSGKTLSMGFGFVEFRTKEQANV 678 Query: 444 AVERLNGYVLDGRALKV 494 A+ L+G+VLDG L++ Sbjct: 679 AISTLDGHVLDGHKLQL 695
>ROA1_CAEEL (Q22037) Heterogeneous nuclear ribonucleoprotein A1| Length = 346 Score = 47.0 bits (110), Expect = 3e-05 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%) Frame = +3 Query: 267 EDLR-VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 E+LR +FVG L + + + Q G + + V+ D T RSRGFGFVT S EV+ Sbjct: 20 ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDA 79 Query: 444 AVERLNGYVLDGRAL 488 A+++ +++DG+ + Sbjct: 80 AMKQ-RPHIIDGKTV 93 Score = 40.0 bits (92), Expect = 0.004 Identities = 23/76 (30%), Positives = 38/76 (50%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R++V + L F + G+V E+I DK T + RGFGFVT + V++ V + Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174 Query: 456 LNGYVLDGRALKVNSG 503 ++++G V G Sbjct: 175 -KSHMVNGHRCDVRKG 189
>RSD1_SCHPO (O13845) RNA-binding protein rsd1| Length = 604 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/76 (31%), Positives = 41/76 (53%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+ V N+ F++ + +FE G +E V + D RS+GFG++ A+E+ Sbjct: 341 RLCVSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDD-QNRSKGFGYIQYRNPISARNALEK 399 Query: 456 LNGYVLDGRALKVNSG 503 +NG+ L GR ++V G Sbjct: 400 MNGFDLAGRNMRVCLG 415 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/57 (36%), Positives = 33/57 (57%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 VFV L + S +L FEQAG V +++ DK++GRS+G +V + V+ A+ Sbjct: 242 VFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAI 298
>ACF_MOUSE (Q5YD48) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 595 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S +E + A+++L Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMD-FNGNNRGYAFVTFSNKQEAKNAIKQL 116 Query: 459 NGY-VLDGRALKV 494 N Y + GR L V Sbjct: 117 NNYEIRTGRLLGV 129 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFE--QAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++V NL S + F + G+VE V+ I D + FV S E+ EA++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNSIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 453 RLNGYVLDGRALKV 494 LNG VLDG ++V Sbjct: 285 ALNGKVLDGSPIEV 298
>DAZL_CALJA (Q9BGN8) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 296 Score = 46.2 bits (108), Expect = 5e-05 Identities = 23/58 (39%), Positives = 38/58 (65%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 VFVG + +D ++ G F + GSV+ V++I D+ TG S+G+GFV+ +V++ VE Sbjct: 42 VFVGGIDVRMDETEIRGFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVE 98
>PABP_DROME (P21187) Polyadenylate-binding protein (Poly(A)-binding protein)| (PABP) Length = 634 Score = 46.2 bits (108), Expect = 5e-05 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 1/73 (1%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 V+V N D +L FE G + +V+ K G+S+GFGFV T E E AV+ L Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243 Query: 459 NGYVL-DGRALKV 494 NG + +G++L V Sbjct: 244 NGKDMGEGKSLYV 256 Score = 45.4 bits (106), Expect = 9e-05 Identities = 26/74 (35%), Positives = 41/74 (55%) Frame = +3 Query: 273 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 + ++V NL ++D +L F G++ +V+ D+ GRS+GFGFV + E AV Sbjct: 287 VNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDE-EGRSKGFGFVCFNAASEATCAVT 345 Query: 453 RLNGYVLDGRALKV 494 LNG V+ + L V Sbjct: 346 ELNGRVVGSKPLYV 359 Score = 45.1 bits (105), Expect = 1e-04 Identities = 22/72 (30%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 VF+ NL ++D+ + F G++ +V D+ G S+G+GFV T E +++++ Sbjct: 92 VFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDE-KGNSKGYGFVHFETEEAANTSIDKV 150 Query: 459 NGYVLDGRALKV 494 NG +L+G+ + V Sbjct: 151 NGMLLNGKKVYV 162 Score = 41.6 bits (96), Expect = 0.001 Identities = 20/72 (27%), Positives = 39/72 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG+LP V+ + L F AG V + V D +T RS G+ +V + E A++ + Sbjct: 4 LYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTM 63 Query: 459 NGYVLDGRALKV 494 N ++ + +++ Sbjct: 64 NFDLVRNKPIRI 75
>MRD1_EMENI (Q5BGA9) Multiple RNA-binding domain-containing protein 1| Length = 819 Score = 46.2 bits (108), Expect = 5e-05 Identities = 22/73 (30%), Positives = 37/73 (50%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+FV NL + ++L +F G +E + V +D S+GF +V + + EA Sbjct: 296 RLFVRNLSYETKESELEPVFSPFGKIEEIHVAFDTRFTTSKGFAYVQYADPDAAVEAYRN 355 Query: 456 LNGYVLDGRALKV 494 L+G + GR L + Sbjct: 356 LDGKIFQGRLLHI 368 Score = 38.5 bits (88), Expect = 0.011 Identities = 23/71 (32%), Positives = 32/71 (45%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++ + NLPF + LF G + V V K +RGFGF + E E A++ Sbjct: 698 KIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP-KKFDRSARGFGFADFVSAREAENAMDA 756 Query: 456 LNGYVLDGRAL 488 L L GR L Sbjct: 757 LKNTHLLGRRL 767 Score = 31.6 bits (70), Expect = 1.3 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 5/79 (6%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYD---KLTGR--SRGFGFVTMSTVEEVEE 443 +F+ NL FS + L F + K G+ S GFGF T + + Sbjct: 594 LFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFKTKAQAQA 653 Query: 444 AVERLNGYVLDGRALKVNS 500 A+ +NGY LD L V + Sbjct: 654 ALAVMNGYTLDRHTLVVRA 672
>DAZL_CHICK (Q804A9) Deleted in azoospermia-like (DAZ-like protein)| Length = 289 Score = 45.8 bits (107), Expect = 7e-05 Identities = 23/58 (39%), Positives = 39/58 (67%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 VFVG + ++ A++ FEQ G+V+ V++I D+ TG S+G+GFV+ +V++ VE Sbjct: 38 VFVGGIDIRMNEAEIRSYFEQYGTVKEVKIITDR-TGVSKGYGFVSFLDNVDVQKIVE 94
>MRD1_ASPFU (Q4WJT7) Multiple RNA-binding domain-containing protein 1| Length = 825 Score = 45.8 bits (107), Expect = 7e-05 Identities = 21/73 (28%), Positives = 38/73 (52%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+FV NLP+ + L +F + G +E + V +D + S+GF +V + +A + Sbjct: 302 RLFVRNLPYDASESDLEPVFSKFGKIEEIHVAFDTRSTTSKGFAYVQYIEPDAAVQAYKE 361 Query: 456 LNGYVLDGRALKV 494 L+G GR + + Sbjct: 362 LDGKHFQGRLMHI 374 Score = 38.5 bits (88), Expect = 0.011 Identities = 23/71 (32%), Positives = 32/71 (45%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++ + NLPF + LF G + V V K +RGFGF + E E A++ Sbjct: 703 KIIIKNLPFQATKKDVRSLFGAYGQLRSVRVP-KKFDRSARGFGFADFVSAREAENAMDA 761 Query: 456 LNGYVLDGRAL 488 L L GR L Sbjct: 762 LKNTHLLGRRL 772 Score = 32.0 bits (71), Expect = 0.98 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYD---KLTGR--SRGFGFVTMSTVEEVEE 443 +FV NL FS + + +F+ + K G+ S GFGFV T + + Sbjct: 599 LFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDFRTKAQAQA 658 Query: 444 AVERLNGYVLDGRALKVNS 500 A+ ++GY LD L V + Sbjct: 659 ALAAMDGYKLDQHELVVRA 677
>RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif protein 7)| Length = 262 Score = 45.8 bits (107), Expect = 7e-05 Identities = 30/75 (40%), Positives = 38/75 (50%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D +FVGNL V L LF QAG V V++ DK G+ + F FV V A+ Sbjct: 9 DRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKPKQFAFVNFKHEVSVPYAM 67 Query: 450 ERLNGYVLDGRALKV 494 LNG L GR +K+ Sbjct: 68 NLLNGIKLFGRPIKI 82
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 45.8 bits (107), Expect = 7e-05 Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGR---SRGFGFVTMSTVEEVEEAV 449 +F+ NL FS L G+F + G+++ + K S GFGFV E+ ++A+ Sbjct: 724 LFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKAL 783 Query: 450 ERLNGYVLDGRALKV 494 ++L G+ +DG L+V Sbjct: 784 KQLQGHTVDGHKLEV 798 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/73 (34%), Positives = 35/73 (47%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+FV NL ++ L LF G + + D LT + +GF FVT E +A Sbjct: 401 RLFVRNLSYTSSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 460 Query: 456 LNGYVLDGRALKV 494 ++G V GR L V Sbjct: 461 VDGQVFQGRMLHV 473 Score = 36.2 bits (82), Expect = 0.052 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKL-TGRSRGFGFVTMSTVEEVEEAVE 452 ++ V N+PF + ++ LF G ++ V + TG RGFGFV T ++ ++A Sbjct: 825 KILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFN 884 Query: 453 RL 458 L Sbjct: 885 AL 886
>RBM7_HUMAN (Q9Y580) RNA-binding protein 7 (RNA-binding motif protein 7)| Length = 266 Score = 45.8 bits (107), Expect = 7e-05 Identities = 30/75 (40%), Positives = 38/75 (50%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D +FVGNL V L LF QAG V V++ DK G+ + F FV V A+ Sbjct: 9 DRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKPKQFAFVNFKHEVSVPYAM 67 Query: 450 ERLNGYVLDGRALKV 494 LNG L GR +K+ Sbjct: 68 NLLNGIKLYGRPIKI 82
>FCA_ARATH (O04425) Flowering time control protein FCA| Length = 747 Score = 45.8 bits (107), Expect = 7e-05 Identities = 22/69 (31%), Positives = 41/69 (59%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S +++FVG++P + ++ FEQ G+V V +I DK TG+ +G FV +T ++ + Sbjct: 117 SSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDADR 176 Query: 444 AVERLNGYV 470 A+ L+ + Sbjct: 177 AIRALHNQI 185 Score = 38.9 bits (89), Expect = 0.008 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 + ++FVG+L ++ +F Q G VE V ++ D+ +SRG GFV S+ E A+ Sbjct: 210 EFKLFVGSLNKQATEKEVEEIFLQFGHVEDVYLMRDEYR-QSRGCGFVKYSSKETAMAAI 268 Query: 450 ERLNG-YVLDG 479 + LNG Y + G Sbjct: 269 DGLNGTYTMRG 279
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 45.8 bits (107), Expect = 7e-05 Identities = 23/57 (40%), Positives = 32/57 (56%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 ++FVG L V L F Q G+VE E+I DK +G+ RGFGFV + ++A Sbjct: 99 KLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKA 155 Score = 45.1 bits (105), Expect = 1e-04 Identities = 26/77 (33%), Positives = 43/77 (55%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 S+ ++F+G L + L G FE G++ V+ + T RSR FGFVT S VEE + Sbjct: 4 SQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADA 63 Query: 444 AVERLNGYVLDGRALKV 494 A+ + + +DG +++ Sbjct: 64 AM-AASPHAVDGNTVEL 79
>PES4_YEAST (P39684) Protein PES4 (DNA polymerase epsilon suppressor 4)| Length = 611 Score = 45.8 bits (107), Expect = 7e-05 Identities = 22/72 (30%), Positives = 42/72 (58%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+G+L +V L G+F++ S +V D +T +S G G++ EE E+A+E L Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152 Query: 459 NGYVLDGRALKV 494 N ++G+ +++ Sbjct: 153 NYTKVNGKEIRI 164
>ACF_HUMAN (Q9NQ94) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 594 Score = 45.8 bits (107), Expect = 7e-05 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S E + A+++L Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKVEAKNAIKQL 116 Query: 459 NGY-VLDGRALKV 494 N Y + +GR L V Sbjct: 117 NNYEIRNGRLLGV 129 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFE--QAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++V NL S + F + G+VE V+ I D + FV S E+ EA++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 453 RLNGYVLDGRALKV 494 LNG VLDG ++V Sbjct: 285 ALNGKVLDGSPIEV 298
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 45.4 bits (106), Expect = 9e-05 Identities = 20/59 (33%), Positives = 33/59 (55%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 +D ++FVG L + +L F + G +E + V D TGRSRGF F+ + E +++ Sbjct: 54 DDRKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDK 112 Score = 37.4 bits (85), Expect = 0.023 Identities = 16/59 (27%), Positives = 33/59 (55%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++FVG L + ++ F Q G++ VE+ +DK + +GF F+T + + V + ++ Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLK 195
>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)| Length = 303 Score = 45.4 bits (106), Expect = 9e-05 Identities = 23/72 (31%), Positives = 38/72 (52%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 V+VGNLP + ++ LF + G V +++ K+ R G+ FV + E+A+ Sbjct: 9 VYVGNLPGDIREREVEDLFSKYGPVVQIDL---KVPPRPPGYAFVEFDDARDAEDAIHGR 65 Query: 459 NGYVLDGRALKV 494 +GY DG L+V Sbjct: 66 DGYDFDGHRLRV 77
>RBM7_MOUSE (Q9CQT2) RNA-binding protein 7 (RNA-binding motif protein 7)| Length = 265 Score = 45.4 bits (106), Expect = 9e-05 Identities = 30/75 (40%), Positives = 38/75 (50%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D +FVGNL V L LF QAG V V++ DK G+ + F FV V A+ Sbjct: 9 DRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDK-DGKLKQFAFVNFKHEVSVPYAM 67 Query: 450 ERLNGYVLDGRALKV 494 LNG L GR +K+ Sbjct: 68 NLLNGIKLFGRPIKI 82
>ACF_PONPY (Q5R9H4) APOBEC1 complementation factor (APOBEC1-stimulating| protein) Length = 587 Score = 45.4 bits (106), Expect = 9e-05 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +F+G LP + +L L E+ G + + ++ D G +RG+ FVT S E + A+++L Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMD-FNGNNRGYAFVTFSNKLEAKNAIKQL 116 Query: 459 NGY-VLDGRALKV 494 N Y + +GR L V Sbjct: 117 NNYEIRNGRLLGV 129 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFE--QAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++V NL S + F + G+VE V+ I D + FV S E+ EA++ Sbjct: 233 LYVRNLMLSTSEEMIEKEFNNIKPGAVERVKKIRD--------YAFVHFSNREDAVEAMK 284 Query: 453 RLNGYVLDGRALKV 494 LNG VLDG ++V Sbjct: 285 ALNGKVLDGSPIEV 298
>CSX1_SCHPO (O13759) RNA-binding post-transcriptional regulator csx1| Length = 632 Score = 45.4 bits (106), Expect = 9e-05 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQA-GSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 + +FVG+L + + + L F S ++I D +TG SR +GFV S+ +E + A Sbjct: 181 EFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHA 240 Query: 447 VERLNGYVLDGRALKVN 497 + + GY+ GR L+++ Sbjct: 241 LMHMQGYLCQGRPLRIS 257
>RBMS2_HUMAN (Q15434) RNA-binding motif, single-stranded-interacting protein 2| (Suppressor of CDC2 with RNA-binding motif 3) Length = 407 Score = 45.4 bits (106), Expect = 9e-05 Identities = 21/62 (33%), Positives = 34/62 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NLP S+D +L G+ + G V ++ D +G SRG GF M + E+ E + Sbjct: 137 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCEAIITHF 195 Query: 459 NG 464 NG Sbjct: 196 NG 197
>RBMS2_MOUSE (Q8VC70) RNA-binding motif, single-stranded-interacting protein 2| Length = 383 Score = 45.4 bits (106), Expect = 9e-05 Identities = 21/62 (33%), Positives = 34/62 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NLP S+D +L G+ + G V ++ D +G SRG GF M + E+ E + Sbjct: 139 LYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGASRGVGFARMESTEKCEAIITHF 197 Query: 459 NG 464 NG Sbjct: 198 NG 199
>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog| Length = 300 Score = 45.1 bits (105), Expect = 1e-04 Identities = 15/45 (33%), Positives = 30/45 (66%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFV 413 +F+G LP+ +D +L F + G +E + ++ DK+T +S+G+ F+ Sbjct: 109 IFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFI 153
>IST3_YEAST (P40565) U2 snRNP component IST3 (U2 snRNP protein SNU17)| (Increased sodium tolerance protein 3) Length = 148 Score = 45.1 bits (105), Expect = 1e-04 Identities = 22/79 (27%), Positives = 42/79 (53%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 + ++ +++GNL + + +F + G V + D+ TG S+GF ++ Sbjct: 27 YKDNAYIYIGNLNRELTEGDILTVFSEYGVPVDVILSRDENTGESQGFAYLKYEDQRSTI 86 Query: 441 EAVERLNGYVLDGRALKVN 497 AV+ LNG+ + GRALK++ Sbjct: 87 LAVDNLNGFKIGGRALKID 105
>NUCL_CHICK (P15771) Nucleolin (Protein C23)| Length = 694 Score = 44.7 bits (104), Expect = 1e-04 Identities = 24/73 (32%), Positives = 39/73 (53%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV NLP+ V ++ +FE A V +V G S+G ++ T E E+A+E Sbjct: 373 LFVKNLPYRVTEDEMKNVFENALEVRLVL----NKEGSSKGMAYIEFKTEAEAEKALEEK 428 Query: 459 NGYVLDGRALKVN 497 G +DGRA+ ++ Sbjct: 429 QGTEVDGRAMVID 441 Score = 36.2 bits (82), Expect = 0.052 Identities = 23/73 (31%), Positives = 37/73 (50%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV L L FE GS+ ++ D+ TG S+GFGFV S+ E+ + A E + Sbjct: 555 LFVRGLSEDTTEETLRESFE--GSIS-ARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAM 611 Query: 459 NGYVLDGRALKVN 497 +DG + ++ Sbjct: 612 EDGEIDGNKVTLD 624
>ROAA_HUMAN (Q99729) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (APOBEC-1-binding protein 1) (ABBP-1) Length = 331 Score = 44.7 bits (104), Expect = 1e-04 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE- 452 ++FVG L + L F + G V + D TGRSRGFGF+ VE+ ++ Sbjct: 69 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 128 Query: 453 ---RLNGYVLD 476 RL+G V+D Sbjct: 129 KEHRLDGRVID 139 Score = 37.0 bits (84), Expect = 0.031 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +3 Query: 276 RVFVGNL-PFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 ++FVG L P S ++ F + G +E +E+ D + RGF F+T E V++ +E Sbjct: 153 KIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLE 212 Query: 453 R 455 + Sbjct: 213 K 213
>PABP2_MOUSE (Q8CCS6) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 301 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VGN+ + + +L F GSV V ++ DK +G +GF ++ S E V ++ L Sbjct: 169 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 227 Query: 459 NGYVLDGRALKV 494 + + GR +KV Sbjct: 228 DESLFRGRQIKV 239
>RB27C_DROME (P48809) Heterogeneous nuclear ribonucleoprotein 27C (Hrb27-C)| (hnRNP 48) (HRP48.1) Length = 421 Score = 44.7 bits (104), Expect = 1e-04 Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 4/67 (5%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTM---STVEEV-EE 443 +VF+G LP +V L F + G V V ++YD+ +SRGFGF++ S+VE V E Sbjct: 97 KVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNE 156 Query: 444 AVERLNG 464 LNG Sbjct: 157 RYINLNG 163 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FVG L + L+ F + G + V+ + +GRSRGFGFVT + V ++ Sbjct: 8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ- 66 Query: 456 LNG-YVLDGRAL 488 NG + LDGR + Sbjct: 67 -NGPHTLDGRTI 77
>PABP2_HUMAN (Q86U42) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VGN+ + + +L F GSV V ++ DK +G +GF ++ S E V ++ L Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 231 Query: 459 NGYVLDGRALKV 494 + + GR +KV Sbjct: 232 DESLFRGRQIKV 243
>PABP2_BOVIN (Q28165) Polyadenylate-binding protein 2 (Poly(A)-binding protein| 2) (PolyA-binding protein II) (PABII) (Polyadenylate-binding nuclear protein 1) (Nuclear poly(A)-binding protein 1) Length = 305 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/72 (30%), Positives = 39/72 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VGN+ + + +L F GSV V ++ DK +G +GF ++ S E V ++ L Sbjct: 173 IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL-AL 231 Query: 459 NGYVLDGRALKV 494 + + GR +KV Sbjct: 232 DESLFRGRQIKV 243
>MK67I_HUMAN (Q9BYG3) MKI67 FHA domain-interacting nucleolar phosphoprotein| (Nucleolar protein interacting with the FHA domain of pKI-67) (hNIFK) (Nucleolar phosphoprotein Nopp34) Length = 293 Score = 44.7 bits (104), Expect = 1e-04 Identities = 23/76 (30%), Positives = 38/76 (50%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 V+V +LP +D Q+ F Q G+V + K TG S+G+ FV + + + E + Sbjct: 47 VYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIVAETM 106 Query: 459 NGYVLDGRALKVNSGP 506 N Y+ R L+ + P Sbjct: 107 NNYLFGERLLECHFMP 122
>NCBP2_ASHGO (Q754W7) Nuclear cap-binding protein subunit 2| Length = 218 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/76 (31%), Positives = 39/76 (51%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VGNL F QL LF + GS+E + + D+ GF F+ T +E A++ L Sbjct: 48 IYVGNLSFYTSEEQLYELFSKCGSIEKIIMGLDRFKFTPCGFCFIIYQTPQEALAALKYL 107 Query: 459 NGYVLDGRALKVNSGP 506 + LD R + ++ P Sbjct: 108 SKTKLDDREITIDLDP 123
>SAP49_SCHPO (O14102) Spliceosome-associated protein 49| Length = 335 Score = 44.3 bits (103), Expect = 2e-04 Identities = 25/78 (32%), Positives = 41/78 (52%) Frame = +3 Query: 264 SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 ++D +++GNL V + L L QAG V + + D++ GFGF ++VE Sbjct: 8 NQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEY 67 Query: 444 AVERLNGYVLDGRALKVN 497 A + LN L G+ ++VN Sbjct: 68 ACQILNQVKLFGKPIRVN 85 Score = 42.7 bits (99), Expect = 6e-04 Identities = 23/73 (31%), Positives = 36/73 (49%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FVGNL VD L F G + + GRS+G+GFV+ + E + A+E + Sbjct: 101 LFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSYDSFETADAAIEAM 160 Query: 459 NGYVLDGRALKVN 497 N L + + V+ Sbjct: 161 NNQFLMNKPITVS 173
>PPIE_MOUSE (Q9QZH3) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/73 (31%), Positives = 36/73 (49%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG L VD L F G + +++ D T + RGF FV E+ A++ + Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 459 NGYVLDGRALKVN 497 N L GR ++VN Sbjct: 68 NESELFGRTIRVN 80
>PPIE_HUMAN (Q9UNP9) Peptidyl-prolyl cis-trans isomerase E (EC 5.2.1.8) (PPIase| E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) Length = 301 Score = 44.3 bits (103), Expect = 2e-04 Identities = 23/73 (31%), Positives = 36/73 (49%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VG L VD L F G + +++ D T + RGF FV E+ A++ + Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 459 NGYVLDGRALKVN 497 N L GR ++VN Sbjct: 68 NESELFGRTIRVN 80
>IF34_CAEEL (Q19706) Probable eukaryotic translation initiation factor 3| subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3g) Length = 256 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/70 (34%), Positives = 37/70 (52%) Frame = +3 Query: 285 VGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERLNG 464 V NLP ++ +L LF + G V + + DK+TG +GF FVT + ++ A+ LN Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239 Query: 465 YVLDGRALKV 494 + LKV Sbjct: 240 IRMYHMVLKV 249
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 44.3 bits (103), Expect = 2e-04 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE- 452 ++FVG L + L F + G V + D TGRSRGFGF+ VE+ ++ Sbjct: 76 KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVEKVLDQ 135 Query: 453 ---RLNGYVLD 476 RL+G V+D Sbjct: 136 KEHRLDGRVID 146 Score = 37.0 bits (84), Expect = 0.031 Identities = 17/60 (28%), Positives = 31/60 (51%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++FVG L ++ F Q G +E +E+ D + RGF F+T + V++ +E+ Sbjct: 160 KIFVGGLNPEATEEKIREYFGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEK 219
>THOC4_MOUSE (O08583) THO complex subunit 4 (Tho4) (RNA and export| factor-binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) Length = 254 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/73 (32%), Positives = 40/73 (54%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++ V NL F V A + LF + G+++ V YD+ +GRS G V + +A+++ Sbjct: 105 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQ 163 Query: 456 LNGYVLDGRALKV 494 NG LDGR + + Sbjct: 164 YNGVPLDGRPMNI 176
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L + L FE+ G++ V V+ D T RSRGFGF+T S ++ A + Sbjct: 25 KLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNA-QN 83 Query: 456 LNGYVLDGRALK 491 + +DGR ++ Sbjct: 84 ARPHKIDGRTVE 95 Score = 38.9 bits (89), Expect = 0.008 Identities = 18/58 (31%), Positives = 30/58 (51%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG L D L F+ G + V ++ DK TG+ RGF F+ + V++ + Sbjct: 116 KLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKII 173
>DAZL_MACFA (Q95192) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 295 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/58 (37%), Positives = 37/58 (63%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 VFVG + +D ++ F + GSV+ V++I D+ TG S+G+GFV+ +V++ VE Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVE 98
>DAZL_HUMAN (Q92904) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) (DAZ homolog) (SPGY-like-autosomal) Length = 295 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/58 (37%), Positives = 37/58 (63%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 VFVG + +D ++ F + GSV+ V++I D+ TG S+G+GFV+ +V++ VE Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIVE 98
>NOP12_CANGA (Q6FUS6) Nucleolar protein 12| Length = 396 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/57 (36%), Positives = 31/57 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 VFVGNL F D L F GS+E V ++ D T +GF +V + ++ V +A+ Sbjct: 230 VFVGNLDFEEDEESLWKHFGACGSIEYVRIVRDPKTNMGKGFAYVQFNELQSVSKAL 286
>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) Length = 403 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NLP S+D +L + + G V V+ D +G SRG GF M + E+ E + Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRVLRDS-SGASRGVGFARMESTEKCEAVIGHF 201 Query: 459 NG 464 NG Sbjct: 202 NG 203
>THOC4_HUMAN (Q86V81) THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1)| (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF) Length = 256 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/73 (32%), Positives = 40/73 (54%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++ V NL F V A + LF + G+++ V YD+ +GRS G V + +A+++ Sbjct: 106 KLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDR-SGRSLGTADVHFERKADALKAMKQ 164 Query: 456 LNGYVLDGRALKV 494 NG LDGR + + Sbjct: 165 YNGVPLDGRPMNI 177
>DAZL_MOUSE (Q64368) Deleted in azoospermia-like (DAZ-like autosomal) (Deleted| in azoospermia-like 1) Length = 298 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/58 (37%), Positives = 37/58 (63%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 VFVG + +D ++ F + GSV+ V++I D+ TG S+G+GFV+ +V++ VE Sbjct: 42 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFYNDVDVQKIVE 98
>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA-binding motif 2) Length = 406 Score = 43.5 bits (101), Expect = 3e-04 Identities = 20/62 (32%), Positives = 33/62 (53%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++ NLP S+D +L + + G V ++ D +G SRG GF M + E+ E + Sbjct: 143 LYISNLPLSMDEQELENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHF 201 Query: 459 NG 464 NG Sbjct: 202 NG 203
>NCBP2_MOUSE (Q9CQ49) Nuclear cap-binding protein subunit 2 (20 kDa nuclear| cap-binding protein) (NCBP 20 kDa subunit) (CBP20) Length = 156 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/73 (30%), Positives = 40/73 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VGNL F Q+ LF ++G ++ + + DK+ + GF FV + + E A+ + Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101 Query: 459 NGYVLDGRALKVN 497 NG LD R ++ + Sbjct: 102 NGTRLDDRIIRTD 114
>NCBP2_HUMAN (P52298) Nuclear cap-binding protein subunit 2 (20 kDa nuclear| cap-binding protein) (NCBP 20 kDa subunit) (CBP20) (NCBP-interacting protein 1) (NIP1) (Cell proliferation-inducing gene 55 protein) Length = 156 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/73 (30%), Positives = 40/73 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VGNL F Q+ LF ++G ++ + + DK+ + GF FV + + E A+ + Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101 Query: 459 NGYVLDGRALKVN 497 NG LD R ++ + Sbjct: 102 NGTRLDDRIIRTD 114
>NCBP2_BOVIN (Q3ZBJ1) Nuclear cap-binding protein subunit 2| Length = 156 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/73 (30%), Positives = 40/73 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 ++VGNL F Q+ LF ++G ++ + + DK+ + GF FV + + E A+ + Sbjct: 42 LYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRYI 101 Query: 459 NGYVLDGRALKVN 497 NG LD R ++ + Sbjct: 102 NGTRLDDRIIRTD 114
>CUGB1_MOUSE (P28659) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (Deadenylation factor EDEN-BP) (Brain protein F41) Length = 486 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/76 (30%), Positives = 38/76 (50%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E +F+ +LP L +F G+V +V DK T S+ FGFV+ + A Sbjct: 399 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 458 Query: 447 VERLNGYVLDGRALKV 494 ++ +NG+ + + LKV Sbjct: 459 IQSMNGFQIGMKRLKV 474 Score = 35.0 bits (79), Expect = 0.12 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = +3 Query: 273 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTG--RSRGFGFVTMSTVEEVEEA 446 +++FVG +P + L LFEQ G+V + ++ D+ +S+G FVT T + EA Sbjct: 16 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEA 75 Query: 447 VERL-NGYVLDG 479 L N VL G Sbjct: 76 QNALHNMKVLPG 87 Score = 29.6 bits (65), Expect = 4.9 Identities = 16/65 (24%), Positives = 31/65 (47%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 ED ++F+G + + +F G +E ++ G SRG FVT +T + A Sbjct: 106 EDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVTFTTRTMAQTA 164 Query: 447 VERLN 461 ++ ++ Sbjct: 165 IKAMH 169
>CUGB1_HUMAN (Q92879) CUG triplet repeat RNA-binding protein 1 (CUG-BP1)| (RNA-binding protein BRUNOL-2) (Deadenylation factor CUG-BP) (50 kDa Nuclear polyadenylated RNA-binding protein) (EDEN-BP) Length = 486 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/76 (30%), Positives = 38/76 (50%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 E +F+ +LP L +F G+V +V DK T S+ FGFV+ + A Sbjct: 399 EGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAA 458 Query: 447 VERLNGYVLDGRALKV 494 ++ +NG+ + + LKV Sbjct: 459 IQSMNGFQIGMKRLKV 474 Score = 35.4 bits (80), Expect = 0.089 Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = +3 Query: 273 LRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTG--RSRGFGFVTMSTVEEVEEA 446 +++FVG +P + L LFEQ G+V + V+ D+ +S+G FVT T + EA Sbjct: 16 IKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEA 75 Query: 447 VERL-NGYVLDG 479 L N VL G Sbjct: 76 QNALHNMKVLPG 87 Score = 29.6 bits (65), Expect = 4.9 Identities = 16/65 (24%), Positives = 31/65 (47%) Frame = +3 Query: 267 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEA 446 ED ++F+G + + +F G +E ++ G SRG FVT +T + A Sbjct: 106 EDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAFVTFTTRAMAQTA 164 Query: 447 VERLN 461 ++ ++ Sbjct: 165 IKAMH 169
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 43.5 bits (101), Expect = 3e-04 Identities = 18/73 (24%), Positives = 40/73 (54%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV + + ++L FE G ++ + ++Y+K +G+ RG+ F+ ++ A + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 459 NGYVLDGRALKVN 497 +G +DGR + V+ Sbjct: 165 DGKKIDGRRVLVD 177
>MRD1_CANGA (Q6FXP4) Multiple RNA-binding domain-containing protein 1| Length = 861 Score = 43.5 bits (101), Expect = 3e-04 Identities = 23/73 (31%), Positives = 36/73 (49%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+F+ N+ +S LF G ++ V V D TG S+GF +V + EE +A Sbjct: 326 RLFLRNILYSSTEDDFKKLFSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIE 385 Query: 456 LNGYVLDGRALKV 494 L+ + GR L + Sbjct: 386 LDKQIFQGRLLHI 398 Score = 40.4 bits (93), Expect = 0.003 Identities = 25/71 (35%), Positives = 35/71 (49%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++ V NLPF + LF G ++ V V K +RGF FV +E E A+++ Sbjct: 739 KIIVKNLPFEATRKDVFELFNSFGQLKSVRVP-KKFDKSARGFAFVEFVLPKEAENAMDQ 797 Query: 456 LNGYVLDGRAL 488 L G L GR L Sbjct: 798 LQGVHLLGRRL 808 Score = 35.8 bits (81), Expect = 0.068 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIY-----DKLTGRSRGFGFVTMSTVEEVEE 443 +F+ NL F S QL F+ + +V K S GFGFV T E+ Sbjct: 642 IFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMGFGFVEFRTKEQATA 701 Query: 444 AVERLNGYVLDGRALKV 494 + ++G V+DG +++ Sbjct: 702 VISAMDGTVIDGHKIQL 718
>NONO_RAT (Q5FVM4) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 476 Score = 43.1 bits (100), Expect = 4e-04 Identities = 27/78 (34%), Positives = 40/78 (51%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 F++ R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T E Sbjct: 75 FTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTLAE 128 Query: 441 EAVERLNGYVLDGRALKV 494 A L+ L G+ L+V Sbjct: 129 IAKVELDNMPLRGKQLRV 146
>RB97D_DROME (Q02926) Ribonucleoprotein RB97D| Length = 471 Score = 43.1 bits (100), Expect = 4e-04 Identities = 22/58 (37%), Positives = 34/58 (58%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 ++FVG L + D L F Q G+V V+++ DK TG+ RGF FV + V++A+ Sbjct: 124 KLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181 Score = 40.0 bits (92), Expect = 0.004 Identities = 24/72 (33%), Positives = 38/72 (52%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 ++F+G L L + Q G V V V+ D T RSRGFGF+T + V+ A E Sbjct: 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQEN 92 Query: 456 LNGYVLDGRALK 491 +++DG+ ++ Sbjct: 93 -RPHIIDGKTVE 103
>NONO_PONPY (Q5RFL9) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 471 Score = 43.1 bits (100), Expect = 4e-04 Identities = 27/78 (34%), Positives = 40/78 (51%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 F++ R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T E Sbjct: 70 FTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTLAE 123 Query: 441 EAVERLNGYVLDGRALKV 494 A L+ L G+ L+V Sbjct: 124 IAKVELDNMPLRGKQLRV 141
>NONO_HUMAN (Q15233) Non-POU domain-containing octamer-binding protein (NonO| protein) (54 kDa nuclear RNA- and DNA-binding protein) (p54(nrb)) (p54nrb) (55 kDa nuclear protein) (NMT55) (DNA-binding p52/p100 complex, 52 kDa subunit) Length = 471 Score = 43.1 bits (100), Expect = 4e-04 Identities = 27/78 (34%), Positives = 40/78 (51%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 F++ R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T E Sbjct: 70 FTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTLAE 123 Query: 441 EAVERLNGYVLDGRALKV 494 A L+ L G+ L+V Sbjct: 124 IAKVELDNMPLRGKQLRV 141
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 43.1 bits (100), Expect = 4e-04 Identities = 18/73 (24%), Positives = 39/73 (53%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV + + ++L FE G ++ + ++Y K +G+ RG+ F+ ++ A + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 459 NGYVLDGRALKVN 497 +G +DGR + V+ Sbjct: 165 DGKKIDGRRVLVD 177
>NONO_MOUSE (Q99K48) Non-POU domain-containing octamer-binding protein (NonO| protein) Length = 473 Score = 43.1 bits (100), Expect = 4e-04 Identities = 27/78 (34%), Positives = 40/78 (51%) Frame = +3 Query: 261 FSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVE 440 F++ R+FVGNLP + ++ LFE+ G V + DK GFGF+ + T E Sbjct: 72 FTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDK------GFGFIRLETRTLAE 125 Query: 441 EAVERLNGYVLDGRALKV 494 A L+ L G+ L+V Sbjct: 126 IAKVELDNMPLRGKQLRV 143
>MK67I_XENLA (Q7SYS2) MKI67 FHA domain-interacting nucleolar phosphoprotein-like| Length = 278 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/71 (29%), Positives = 37/71 (52%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +++G++P S+ QL F Q G+V + + K TG S+G+ +V E + + + Sbjct: 43 IYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYVEYECDEVAKIVADTM 102 Query: 459 NGYVLDGRALK 491 N Y+ R LK Sbjct: 103 NNYLFCERLLK 113
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 43.1 bits (100), Expect = 4e-04 Identities = 18/73 (24%), Positives = 39/73 (53%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 +FV + + ++L FE G ++ + ++Y K +G+ RG+ F+ ++ A + Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHA 164 Query: 459 NGYVLDGRALKVN 497 +G +DGR + V+ Sbjct: 165 DGKKIDGRRVLVD 177
>MRD1_YARLI (Q6CEW9) Multiple RNA-binding domain-containing protein 1| Length = 828 Score = 43.1 bits (100), Expect = 4e-04 Identities = 26/73 (35%), Positives = 35/73 (47%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D ++ + NLPF + LF GS++ V V K SRGF F + +E E A+ Sbjct: 702 DSKILIKNLPFEATKKDVQKLFGAFGSLKTVRVP-KKFNSESRGFAFAEYVSAKEAEHAM 760 Query: 450 ERLNGYVLDGRAL 488 L G L GR L Sbjct: 761 SALQGTHLLGRRL 773 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/76 (30%), Positives = 35/76 (46%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+F+ NL ++ LF Q G +E V + + TG+ +GF V E A E Sbjct: 302 RLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHVQFEDPENAIAAYEA 361 Query: 456 LNGYVLDGRALKVNSG 503 +G + GR L + G Sbjct: 362 QDGKIFQGRLLHILPG 377 Score = 39.7 bits (91), Expect = 0.005 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 5/77 (6%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQ-----AGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEE 443 VFV NL F S L F+ V+M +K S GFGFV S+ E E Sbjct: 607 VFVKNLNFKTTSRVLTDAFKALDGFLVAQVKMKPDSKNKGKFLSMGFGFVEFSSKEAAEI 666 Query: 444 AVERLNGYVLDGRALKV 494 A + ++G+VLDG L++ Sbjct: 667 AQKAMDGHVLDGHKLQL 683
>SXL_MEGSC (O01671) Sex-lethal homolog| Length = 321 Score = 42.7 bits (99), Expect = 6e-04 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVERL 458 + V LP + +L LF G + ++ D TG S G+GFV + + A+ L Sbjct: 80 LIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNL 139 Query: 459 NGYVLDGRALKVN 497 NG + + +KV+ Sbjct: 140 NGITVRNKRIKVS 152
>RNP24_SCHPO (Q09100) RNA-binding protein rnp24| Length = 369 Score = 42.7 bits (99), Expect = 6e-04 Identities = 21/58 (36%), Positives = 32/58 (55%) Frame = +3 Query: 279 VFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVE 452 +FVGNL F A L F Q G + V ++ + TG+ +GFGFV ++ +A+E Sbjct: 230 LFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFEDTGKCKGFGFVDFPDIDTCMKAME 287
>RAVR1_RAT (Q5XI28) Protein raver-1| Length = 748 Score = 42.7 bits (99), Expect = 6e-04 Identities = 26/76 (34%), Positives = 36/76 (47%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D + V NLP S+ AQ L GS+E ++Y + TG S+G+GF + A Sbjct: 131 DALLCVANLPPSLTQAQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAK 190 Query: 450 ERLNGYVLDGRALKVN 497 L G L R L V+ Sbjct: 191 SDLLGKPLGPRTLYVH 206
>RAVR1_MOUSE (Q9CW46) Protein raver-1| Length = 748 Score = 42.7 bits (99), Expect = 6e-04 Identities = 26/76 (34%), Positives = 36/76 (47%) Frame = +3 Query: 270 DLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAV 449 D + V NLP S+ AQ L GS+E ++Y + TG S+G+GF + A Sbjct: 131 DALLCVANLPPSLTQAQFEELVRPFGSLERCFLVYSERTGHSKGYGFAEYMKKDSAARAK 190 Query: 450 ERLNGYVLDGRALKVN 497 L G L R L V+ Sbjct: 191 SDLLGKPLGPRTLYVH 206
>YDB2_SCHPO (Q10355) Hypothetical RNA-binding protein C22E12.02 in chromosome I| Length = 219 Score = 42.7 bits (99), Expect = 6e-04 Identities = 24/74 (32%), Positives = 41/74 (55%) Frame = +3 Query: 276 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVEEVEEAVER 455 R+FVGNL V+ L F + S+ +V+ D+ G++RGFGFV+ ++ +A Sbjct: 31 RLFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDR-EGKTRGFGFVSFKDSDQFLKAWRE 89 Query: 456 LNGYVLDGRALKVN 497 NG + R +K++ Sbjct: 90 KNGKYIGSRPVKLS 103 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,219,533 Number of Sequences: 219361 Number of extensions: 716575 Number of successful extensions: 3444 Number of sequences better than 10.0: 400 Number of HSP's better than 10.0 without gapping: 2929 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3347 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
