ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal17g17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474477.1| Oryza sativa (japonica cultivar-group), predic... 107 4e-20
2dbj|AK068257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 4e-20
3ref|XM_479680.1| Oryza sativa (japonica cultivar-group), mRNA 100 1e-17
4emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4,... 100 1e-17
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
6dbj|AK120989.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 1e-17
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
8dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
9ref|XM_450466.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.53
10gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome... 42 2.1
11gb|AC127246.3| Mus musculus BAC clone RP24-424L20 from chromosom... 42 2.1
12emb|AL928678.16| Mouse DNA sequence from clone RP23-273B19 on ch... 42 2.1
13gb|AC146891.3| Dasypus novemcinctus clone VMRC5-364E4, complete ... 40 8.3
14gb|BC063347.1| Xenopus tropicalis 7-dehydrocholesterol reductase... 40 8.3
15gb|AF301237.4| Homo sapiens chromosome 8 clone CTD-2547A9 map q1... 40 8.3
16ref|XM_806073.1| Trypanosoma cruzi strain CL Brener protein kina... 40 8.3
17ref|XM_797949.1| Trypanosoma cruzi strain CL Brener protein kina... 40 8.3
18emb|CR376863.10| Zebrafish DNA sequence from clone DKEY-93F15 in... 40 8.3
19gb|AC105082.6| Homo sapiens chromosome 8, clone CTD-2547A9, comp... 40 8.3
20dbj|AK055514.1| Homo sapiens cDNA FLJ30952 fis, clone HCASM1000130 40 8.3
21gb|AF306802.1| Cricetulus griseus clone cos1-3 intrachromosomal ... 40 8.3
22gb|AC009808.8| Homo sapiens chromosome 8, clone RP11-138K8, comp... 40 8.3
23gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone mth2-4... 40 8.3
24ref|NM_077979.1| Caenorhabditis elegans DEgenerin Like family me... 40 8.3
25ref|NM_203904.1| Xenopus tropicalis 7-dehydrocholesterol reducta... 40 8.3
26dbj|AK067468.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
27dbj|AP001831.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.3
28gb|U76403.1|CEU76403 Caenorhabditis elegans degenerin (del-1) mR... 40 8.3 
>ref|XM_474477.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4125

 Score =  107 bits (54), Expect = 4e-20
 Identities = 141/170 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    atgttcttggaagggtttcccaggccgttgggatgcacgatattattgcgaggagcaaac 62
            |||||||||||||| ||| |||  || ||||||||||| ||| |  |  |||| |||| |
Sbjct: 937  atgttcttggaaggcttttccaacccattgggatgcaccatactgctcagaggcgcaagc 996

                                                                        
Query: 63   agcgaagaactgaagaaagtcaagcaagtcatgctctacaccgtgtttgcggcatatcac 122
            | | |||||||||||||| ||||||||||| ||| ||||||  | || || ||||| || 
Sbjct: 997  acccaagaactgaagaaaatcaagcaagtcttgcactacacaatattcgctgcataccat 1056

                                                              
Query: 123  ctggttctcgaggcatccttctttgaggatcagagggtattcttgaatga 172
            |||||| | ||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 1057 ctggttgttgagacatccttctttgaagatcagagggtattcttgaatga 1106



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                        
Query: 408  tcagtctcggggtcactgagaggattcatcgataaattccgccgtcagaatatttatcta 467
            |||||||| || ||||| ||| ||||||| |||| ||||||   ||||||||||||| ||
Sbjct: 1336 tcagtctccggatcactcagaagattcattgatatattccgttatcagaatatttattta 1395

                        
Query: 468  cctgtcacttct 479
            ||||| ||||||
Sbjct: 1396 cctgtaacttct 1407
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>dbj|AK068257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148O14, full
            insert sequence
          Length = 4471

 Score =  107 bits (54), Expect = 4e-20
 Identities = 141/170 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    atgttcttggaagggtttcccaggccgttgggatgcacgatattattgcgaggagcaaac 62
            |||||||||||||| ||| |||  || ||||||||||| ||| |  |  |||| |||| |
Sbjct: 1078 atgttcttggaaggcttttccaacccattgggatgcaccatactgctcagaggcgcaagc 1137

                                                                        
Query: 63   agcgaagaactgaagaaagtcaagcaagtcatgctctacaccgtgtttgcggcatatcac 122
            | | |||||||||||||| ||||||||||| ||| ||||||  | || || ||||| || 
Sbjct: 1138 acccaagaactgaagaaaatcaagcaagtcttgcactacacaatattcgctgcataccat 1197

                                                              
Query: 123  ctggttctcgaggcatccttctttgaggatcagagggtattcttgaatga 172
            |||||| | ||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 1198 ctggttgttgagacatccttctttgaagatcagagggtattcttgaatga 1247



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                        
Query: 408  tcagtctcggggtcactgagaggattcatcgataaattccgccgtcagaatatttatcta 467
            |||||||| || ||||| ||| ||||||| |||| ||||||   ||||||||||||| ||
Sbjct: 1477 tcagtctccggatcactcagaagattcattgatatattccgttatcagaatatttattta 1536

                        
Query: 468  cctgtcacttct 479
            ||||| ||||||
Sbjct: 1537 cctgtaacttct 1548
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>ref|XM_479680.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 5502

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    atgttcttggaagggtttcccaggccgttgggatgcacgatattattgcgaggagcaaac 62
            |||||||||||||| || ||||  |||||||| || ||||||||  |  | || ||||| 
Sbjct: 1623 atgttcttggaaggcttccccaaaccgttgggttgtacgatattgctaaggggtgcaaat 1682

                                                                        
Query: 63   agcgaagaactgaagaaagtcaagcaagtcatgctctacaccgtgtttgcggcatatcac 122
            || ||||||||||| ||||||||||||||||||| |||||| || ||||| || || |||
Sbjct: 1683 agtgaagaactgaaaaaagtcaagcaagtcatgcactacacagtatttgcagcgtaccac 1742

                                                              
Query: 123  ctggttctcgaggcatccttctttgaggatcagagggtattcttgaatga 172
             || |||| ||  |||| |||||||| ||||||||| |||| ||||||||
Sbjct: 1743 ttgattcttgaaacatcattctttgaagatcagaggatatttttgaatga 1792



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 452  tcagaatatttatctacctgtcac 475
            ||||||||||||| ||||||||||
Sbjct: 2126 tcagaatatttatttacctgtcac 2149
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>emb|AL606656.3|OSJN00099 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020J19,
             complete sequence
          Length = 123272

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                         
Query: 67    aagaactgaagaaagtcaagcaagtcatgctctacaccgtgtttgcggcatatcacctgg 126
             |||||||||||||| ||||||||||| ||| ||||||  | || || ||||| || ||||
Sbjct: 74554 aagaactgaagaaaatcaagcaagtcttgcactacacaatattcgctgcataccatctgg 74613

                                                           
Query: 127   ttctcgaggcatccttctttgaggatcagagggtattcttgaatga 172
             || | ||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 74614 ttgttgagacatccttctttgaagatcagagggtattcttgaatga 74659



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                         
Query: 408   tcagtctcggggtcactgagaggattcatcgataaattccgccgtcagaatatttatcta 467
             |||||||| || ||||| ||| ||||||| |||| ||||||   ||||||||||||| ||
Sbjct: 74889 tcagtctccggatcactcagaagattcattgatatattccgttatcagaatatttattta 74948

                         
Query: 468   cctgtcacttct 479
             ||||| ||||||
Sbjct: 74949 cctgtaacttct 74960
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 92/106 (86%)
 Strand = Plus / Plus

                                                                            
Query: 67       aagaactgaagaaagtcaagcaagtcatgctctacaccgtgtttgcggcatatcacctgg 126
                |||||||||||||| ||||||||||| ||| ||||||  | || || ||||| || ||||
Sbjct: 35449751 aagaactgaagaaaatcaagcaagtcttgcactacacaatattcgctgcataccatctgg 35449810

                                                              
Query: 127      ttctcgaggcatccttctttgaggatcagagggtattcttgaatga 172
                || | ||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 35449811 ttgttgagacatccttctttgaagatcagagggtattcttgaatga 35449856



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                            
Query: 408      tcagtctcggggtcactgagaggattcatcgataaattccgccgtcagaatatttatcta 467
                |||||||| || ||||| ||| ||||||| |||| ||||||   ||||||||||||| ||
Sbjct: 35450086 tcagtctccggatcactcagaagattcattgatatattccgttatcagaatatttattta 35450145

                            
Query: 468      cctgtcacttct 479
                ||||| ||||||
Sbjct: 35450146 cctgtaacttct 35450157
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>dbj|AK120989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042P03, full
            insert sequence
          Length = 5500

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 140/170 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    atgttcttggaagggtttcccaggccgttgggatgcacgatattattgcgaggagcaaac 62
            |||||||||||||| || ||||  |||||||| || ||||||||  |  | || ||||| 
Sbjct: 1623 atgttcttggaaggcttccccaaaccgttgggttgtacgatattgctaaggggtgcaaat 1682

                                                                        
Query: 63   agcgaagaactgaagaaagtcaagcaagtcatgctctacaccgtgtttgcggcatatcac 122
            || ||||||||||| ||||||||||||||||||| |||||| || ||||| || || |||
Sbjct: 1683 agtgaagaactgaaaaaagtcaagcaagtcatgcactacacagtatttgcagcgtaccac 1742

                                                              
Query: 123  ctggttctcgaggcatccttctttgaggatcagagggtattcttgaatga 172
             || |||| ||  |||| |||||||| ||||||||| |||| ||||||||
Sbjct: 1743 ttgattcttgaaacatcattctttgaagatcagaggatatttttgaatga 1792



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 452  tcagaatatttatctacctgtcac 475
            ||||||||||||| ||||||||||
Sbjct: 2126 tcagaatatttatttacctgtcac 2149
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Plus

                                                                          
Query: 57     gcaaacagcgaagaactgaagaaagtcaagcaagtcatgctctacaccgtgtttgcggca 116
              ||||| || ||||||||||| ||||||||||||||||||| |||||| || ||||| || 
Sbjct: 247897 gcaaatagtgaagaactgaaaaaagtcaagcaagtcatgcactacacagtatttgcagcg 247956

                                                                      
Query: 117    tatcacctggttctcgaggcatccttctttgaggatcagagggtattcttgaatga 172
              || ||| || |||| ||  |||| |||||||| ||||||||| |||| ||||||||
Sbjct: 247957 taccacttgattcttgaaacatcattctttgaagatcagaggatatttttgaatga 248012



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 452    tcagaatatttatctacctgtcac 475
              ||||||||||||| ||||||||||
Sbjct: 248346 tcagaatatttatttacctgtcac 248369
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>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1300_E01
          Length = 103022

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Plus

                                                                         
Query: 57    gcaaacagcgaagaactgaagaaagtcaagcaagtcatgctctacaccgtgtttgcggca 116
             ||||| || ||||||||||| ||||||||||||||||||| |||||| || ||||| || 
Sbjct: 14323 gcaaatagtgaagaactgaaaaaagtcaagcaagtcatgcactacacagtatttgcagcg 14382

                                                                     
Query: 117   tatcacctggttctcgaggcatccttctttgaggatcagagggtattcttgaatga 172
             || ||| || |||| ||  |||| |||||||| ||||||||| |||| ||||||||
Sbjct: 14383 taccacttgattcttgaaacatcattctttgaagatcagaggatatttttgaatga 14438



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 452   tcagaatatttatctacctgtcac 475
             ||||||||||||| ||||||||||
Sbjct: 14772 tcagaatatttatttacctgtcac 14795
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>ref|XM_450466.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4683

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                      
Query: 30   ttgggatgcacgatattattgcgaggagcaaacagcgaagaactgaagaaagtcaagc 87
            |||||||||||||| ||| ||  |||| |||  || ||||||||||||||||| ||||
Sbjct: 1555 ttgggatgcacgattttactgaaaggatcaacaagtgaagaactgaagaaagttaagc 1612
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>gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome 16, complete sequence
          Length = 233527

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 543    ggtattcatgccatgttaatgacagatgg 571
              ||||||||||| |||||||||||| ||||
Sbjct: 131282 ggtattcatgctatgttaatgacaaatgg 131310
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>gb|AC127246.3| Mus musculus BAC clone RP24-424L20 from chromosome 16, complete sequence
          Length = 181475

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 543    ggtattcatgccatgttaatgacagatgg 571
              ||||||||||| |||||||||||| ||||
Sbjct: 171216 ggtattcatgctatgttaatgacaaatgg 171188
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>emb|AL928678.16| Mouse DNA sequence from clone RP23-273B19 on chromosome 2, complete
             sequence
          Length = 167304

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 142   tctttgaggatcagagggtattctt 166
             |||||||| ||||||||||||||||
Sbjct: 12996 tctttgagaatcagagggtattctt 13020
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>gb|AC146891.3| Dasypus novemcinctus clone VMRC5-364E4, complete sequence
          Length = 133673

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   tctcaagagacagctgatca 496
             ||||||||||||||||||||
Sbjct: 61948 tctcaagagacagctgatca 61929
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>gb|BC063347.1| Xenopus tropicalis 7-dehydrocholesterol reductase, mRNA (cDNA clone
           MGC:75866 IMAGE:5382913), complete cds
          Length = 1719

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 523 atcaacaagtaccaagtgaa 542
           ||||||||||||||||||||
Sbjct: 456 atcaacaagtaccaagtgaa 475
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>gb|AF301237.4| Homo sapiens chromosome 8 clone CTD-2547A9 map q13.3, complete sequence
          Length = 169842

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 53     aggagcaaacagcgaagaactgaa 76
              ||||||||||||| ||||||||||
Sbjct: 132437 aggagcaaacagcaaagaactgaa 132414
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>ref|XM_806073.1| Trypanosoma cruzi strain CL Brener protein kinase
            (Tc00.1047053511657.20) partial mRNA
          Length = 4008

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   caaacagcgaagaactgaag 77
            ||||||||||||||||||||
Sbjct: 2192 caaacagcgaagaactgaag 2211
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>ref|XM_797949.1| Trypanosoma cruzi strain CL Brener protein kinase
            (Tc00.1047053509773.9) partial mRNA
          Length = 2615

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 58   caaacagcgaagaactgaag 77
            ||||||||||||||||||||
Sbjct: 2192 caaacagcgaagaactgaag 2211
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>emb|CR376863.10| Zebrafish DNA sequence from clone DKEY-93F15 in linkage group 5,
             complete sequence
          Length = 183007

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    gggatgcacgatattattgc 51
             ||||||||||||||||||||
Sbjct: 46669 gggatgcacgatattattgc 46688
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>gb|AC105082.6| Homo sapiens chromosome 8, clone CTD-2547A9, complete sequence
          Length = 169845

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 53     aggagcaaacagcgaagaactgaa 76
              ||||||||||||| ||||||||||
Sbjct: 132439 aggagcaaacagcaaagaactgaa 132416
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>dbj|AK055514.1| Homo sapiens cDNA FLJ30952 fis, clone HCASM1000130
          Length = 2367

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 53  aggagcaaacagcgaagaactgaa 76
           ||||||||||||| ||||||||||
Sbjct: 209 aggagcaaacagcaaagaactgaa 232
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>gb|AF306802.1| Cricetulus griseus clone cos1-3 intrachromosomal telomeric-like
            sequence
          Length = 1527

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  aattctgatgcagaggcaag 295
            ||||||||||||||||||||
Sbjct: 1112 aattctgatgcagaggcaag 1093
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>gb|AC009808.8| Homo sapiens chromosome 8, clone RP11-138K8, complete sequence
          Length = 173805

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    aggagcaaacagcgaagaactgaa 76
             ||||||||||||| ||||||||||
Sbjct: 51164 aggagcaaacagcaaagaactgaa 51141
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>gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone mth2-44o11, complete sequence
          Length = 126437

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    atcatttcctgtcagtcata 231
              ||||||||||||||||||||
Sbjct: 102479 atcatttcctgtcagtcata 102460
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>ref|NM_077979.1| Caenorhabditis elegans DEgenerin Like family member (del-1) (del-1)
           mRNA, complete cds
          Length = 1995

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 tgaaggaagggccatcattt 218
           ||||||||||||||||||||
Sbjct: 505 tgaaggaagggccatcattt 486
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>ref|NM_203904.1| Xenopus tropicalis 7-dehydrocholesterol reductase (MGC75866), mRNA
          Length = 1719

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 523 atcaacaagtaccaagtgaa 542
           ||||||||||||||||||||
Sbjct: 456 atcaacaagtaccaagtgaa 475
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>dbj|AK067468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D05, full
           insert sequence
          Length = 3566

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 452 tcagaatatttatctacctgtcac 475
           ||||||||||||| ||||||||||
Sbjct: 185 tcagaatatttatttacctgtcac 208
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>dbj|AP001831.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-317J19, complete
             sequence
          Length = 185919

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   ttatctacctgtcacttctc 480
             ||||||||||||||||||||
Sbjct: 47098 ttatctacctgtcacttctc 47079
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>gb|U76403.1|CEU76403 Caenorhabditis elegans degenerin (del-1) mRNA, complete cds
          Length = 1995

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 tgaaggaagggccatcattt 218
           ||||||||||||||||||||
Sbjct: 505 tgaaggaagggccatcattt 486


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,210,700
Number of Sequences: 3902068
Number of extensions: 5210700
Number of successful extensions: 88645
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88573
Number of HSP's gapped (non-prelim): 68
length of query: 609
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 586
effective length of database: 17,143,297,704
effective search space: 10045972454544
effective search space used: 10045972454544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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