ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal17f22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF118149.1|AF118149 Secale cereale ribosomal protein S7 mRNA, complete cds Length = 819 Score = 789 bits (398), Expect = 0.0 Identities = 444/458 (96%), Gaps = 1/458 (0%) Strand = Plus / Plus Query: 1 aggcgaagaaagggcgaaagcaccatgtacacggcgaggaagaagatccagaaggacaag 60 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13 aggcgaagaaagtgc-aaagcaccatgtacacggcgaggaagaagatccagaaggacaag 71 Query: 61 ggcctcgagccctccgagttcgaggactccgtcgcgcaggctttcttcgacctggagaat 120 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 72 ggcctcgagccctccgagttcgaggacaccgtcgcgcaggctttcttcgacctggagaat 131 Query: 121 ggcaaccaggagctcaagagcgacgtcaaagacctctacatcaacgccgccttccagatg 180 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132 ggcaaccaggagctcaagagcgacgttaaagacctctacatcaacgccgccttccagatg 191 Query: 181 gatgttgcagggaacaggaaggccgtggtcatccacgtcccgtacaggctccgcaagtcc 240 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | Sbjct: 192 gatgttgcagggaacaggaaggccgtggtcatccacgtgccgtataggctccgcaagaac 251 Query: 241 ttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcggcaaggac 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 ttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcggcaaggac 311 Query: 301 gttgttattgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgtt 360 |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 312 gttgttattgttgctacaaggcggattgtgaggccacccaagaagggttctgctgttgtt 371 Query: 361 cgccctcgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttac 420 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 372 cgccctcgtaccagaactttgactgctgttcatgatggccttttggaggatgttgtgtac 431 Query: 421 ccagctgagattgtggggaaacgtgtcagatatcgtct 458 |||||||||||||||||||||||||||||||||||||| Sbjct: 432 ccagctgagattgtggggaaacgtgtcagatatcgtct 469
>gb|AY846832.1| Triticum aestivum ribosomal protein S7 mRNA, complete cds Length = 600 Score = 478 bits (241), Expect = e-132 Identities = 379/425 (89%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 18 atgtacaccgccaggaagaagatccagaaggacaagggcgtcgagccctccgagttcgag 77 Query: 85 gactccgtcgcgcaggctttcttcgacctggagaatggcaaccaggagctcaagagcgac 144 ||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 78 gacaccgttgcgcaggctttctttgacctggagaatggcaaccaggagctcaagagcgac 137 Query: 145 gtcaaagacctctacatcaacgccgccttccagatggatgttgcagggaacaggaaggcc 204 |||| ||||| ||||||||| | || ||||||||||||||| ||||||||||||||| Sbjct: 138 ctcaaggacctgtacatcaacactgcaatccagatggatgttgttgggaacaggaaggcc 197 Query: 205 gtggtcatccacgtcccgtacaggctccgcaagtccttcaggaagatccacgtcaggctc 264 ||||| ||||| || || ||| | || |||||| |||||||||||||||| ||||||||| Sbjct: 198 gtggtgatccatgtgccataccgtctgcgcaagcccttcaggaagatccatgtcaggctc 257 Query: 265 gtcagggagctcgagaagaagttcagcggcaaggacgttgttattgttgcaacaaggcgg 324 ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| || Sbjct: 258 gtcagggagctcgagaagaagtttagcggcaaggatgttgtctttgttgcaacaagaagg 317 Query: 325 attgtgaggccacccaaaaaaggttctgctgttgttcgccctcgtacaagaactttgact 384 || |||||||||||||| || |||||||||||| |||||||| || || || |||| Sbjct: 318 atcgtgaggccacccaagaagggttctgctgttcagcgccctcgcaccaggaccctgaca 377 Query: 385 gctgttcatgatggtcttttggaggatgttgtttacccagctgagattgtggggaaacgt 444 ||||||||||||||| | |||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 378 gctgttcatgatggtatcttggaggatgttgtgtacccagctgagattgtggggaagcgt 437 Query: 445 gtcag 449 ||||| Sbjct: 438 gtcag 442
>emb|AJ315794.1|HVU315794 Hordeum vulgare mRNA for Ribosomal protein S7 (rps7 gene) Length = 852 Score = 464 bits (234), Expect = e-127 Identities = 379/425 (89%), Gaps = 3/425 (0%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| || ||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 67 atgtacaccgccaggaagaagatccagaaggacaagggcgtcgagccctcggagttcgag 126 Query: 85 gactccgtcgcgcaggctttcttcgacctggagaatggcaaccaggagctcaagagcgac 144 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 127 gacaccgtcgcgcaggctttctttgacctggagaatggcaaccaggagctcaagagcgac 186 Query: 145 gtcaaagacctctacatcaacgccgccttccagatggatgttgcagggaacaggaaggcc 204 |||| ||||| ||||||||| | || ||||||||||||||| ||||||||||||||| Sbjct: 187 ctcaaggacctgtacatcaacactgcgatccagatggatgttgttgggaacaggaaggcc 246 Query: 205 gtggtcatccacgtcccgtacaggctccgcaagtccttcaggaagatccacgtcaggctc 264 ||||| ||||| || |||||| | ||||||||| |||||||||||||||| ||||||||| Sbjct: 247 gtggtgatccatgtgccgtaccgtctccgcaagcccttcaggaagatccatgtcaggctc 306 Query: 265 gtcagggagctcgagaagaagttcagcggcaaggacgttgttattgttgcaacaaggcgg 324 |||||||||||||||| |||| ||||||||||| ||||| ||||||||||||| || Sbjct: 307 gtcagggagctcgaga--gagtt-agcggcaaggatgttgtctttgttgcaacaagaagg 363 Query: 325 attgtgaggccacccaaaaaaggttctgctgttgttcgccctcgtacaagaactttgact 384 ||||||||||||||||| || |||||||||||| |||||||| || ||||| |||| Sbjct: 364 attgtgaggccacccaagaagggttctgctgttcagcgccctcgcaccagaaccctgaca 423 Query: 385 gctgttcatgatggtcttttggaggatgttgtttacccagctgagattgtggggaaacgt 444 ||||||||||||||| | |||||||||||||| ||||||||||||||||||||||| || Sbjct: 424 gctgttcatgatggtatcttggaggatgttgtgtacccagctgagattgtggggaagcgc 483 Query: 445 gtcag 449 ||||| Sbjct: 484 gtcag 488
>gb|BT016582.1| Zea mays clone Contig415 mRNA sequence Length = 907 Score = 448 bits (226), Expect = e-123 Identities = 382/434 (88%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 106 atgtacaccgcgaggaagaagatccagaaggagaagggccttgagccctccgagttcgag 165 Query: 85 gactccgtcgcgcaggctttcttcgacctggagaatggcaaccaggagctcaagagcgac 144 |||||||| || ||||||||||| || |||||||| || ||||||||||||||||||||| Sbjct: 166 gactccgttgcccaggctttctttgatctggagaacgggaaccaggagctcaagagcgac 225 Query: 145 gtcaaagacctctacatcaacgccgccttccagatggatgttgcagggaacaggaaggcc 204 |||| ||||| ||||||||| || |||||||||||||| | |||| ||||||||| Sbjct: 226 ctcaaggacctgtacatcaacaatgctatccagatggatgttaccgggagcaggaaggct 285 Query: 205 gtggtcatccacgtcccgtacaggctccgcaagtccttcaggaagatccacgtcaggctc 264 || |||||||||||||| ||| | || |||||| |||||||||||||||| ||||| ||| Sbjct: 286 gttgtcatccacgtcccataccgcctgcgcaaggccttcaggaagatccatgtcagactc 345 Query: 265 gtcagggagctcgagaagaagttcagcggcaaggacgttgttattgttgcaacaaggcgg 324 ||||||||||| |||||||| |||||||||||||| || || |||||||| |||||| || Sbjct: 346 gtcagggagctggagaagaaattcagcggcaaggatgtggtaattgttgctacaaggagg 405 Query: 325 attgtgaggccacccaaaaaaggttctgctgttgttcgccctcgtacaagaactttgact 384 ||||||||||||||||| || ||||| |||||| | |||||||| || || ||| ||||| Sbjct: 406 attgtgaggccacccaagaagggttcagctgttctgcgccctcgcaccaggactctgact 465 Query: 385 gctgttcatgatggtcttttggaggatgttgtttacccagctgagattgtggggaaacgt 444 |||||||| ||||| | |||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 466 gctgttcacgatggcatcttggaggatgttgtctacccagctgagattgtggggaagcgt 525 Query: 445 gtcagatatcgtct 458 |||||||| ||||| Sbjct: 526 gtcagataccgtct 539
>dbj|AK122143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136J20, full insert sequence Length = 966 Score = 448 bits (226), Expect = e-123 Identities = 364/410 (88%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 73 atgtacaccgcgaggaagaagatccagaaggagaagggcctcgagccctccgagttcgag 132 Query: 85 gactccgtcgcgcaggctttcttcgacctggagaatggcaaccaggagctcaagagcgac 144 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 133 gactccgtcgcgcaggctttctttgacctcgagaatggcaaccaggagctcaagagcgag 192 Query: 145 gtcaaagacctctacatcaacgccgccttccagatggatgttgcagggaacaggaaggcc 204 |||| ||||| ||||||||| || ||||||||||| |||| |||||||||||||| Sbjct: 193 ctcaaggacctgtacatcaacaatgcagtccagatggatattgccgggaacaggaaggct 252 Query: 205 gtggtcatccacgtcccgtacaggctccgcaagtccttcaggaagatccacgtcaggctc 264 ||||| |||||||| |||||| | || |||||| | |||| ||| ||||| |||||||| Sbjct: 253 gtggtgatccacgtgccgtaccgtctgcgcaaggcattcaagaaaatccatgtcaggctt 312 Query: 265 gtcagggagctcgagaagaagttcagcggcaaggacgttgttattgttgcaacaaggcgg 324 ||||||||||||||||||||||||||||||||||| || || ||||||||||||||| || Sbjct: 313 gtcagggagctcgagaagaagttcagcggcaaggatgtggtaattgttgcaacaaggagg 372 Query: 325 attgtgaggccacccaaaaaaggttctgctgttgttcgccctcgtacaagaactttgact 384 ||||||||||| ||||| || || || |||||| |||||||| ||||||||| | ||| Sbjct: 373 attgtgaggcctcccaagaagggctcggctgttcagcgccctcgcacaagaactcttact 432 Query: 385 gctgttcatgatggtcttttggaggatgttgtttacccagctgagattgt 434 ||||||||||||||| | ||||||||||| || ||||||||||||||||| Sbjct: 433 gctgttcatgatggtatcttggaggatgtagtctacccagctgagattgt 482
>dbj|AK059192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H09, full insert sequence Length = 830 Score = 448 bits (226), Expect = e-123 Identities = 364/410 (88%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 72 atgtacaccgcgaggaagaagatccagaaggagaagggcctcgagccctccgagttcgag 131 Query: 85 gactccgtcgcgcaggctttcttcgacctggagaatggcaaccaggagctcaagagcgac 144 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 132 gactccgtcgcgcaggctttctttgacctcgagaatggcaaccaggagctcaagagcgag 191 Query: 145 gtcaaagacctctacatcaacgccgccttccagatggatgttgcagggaacaggaaggcc 204 |||| ||||| ||||||||| || ||||||||||| |||| |||||||||||||| Sbjct: 192 ctcaaggacctgtacatcaacaatgcagtccagatggatattgccgggaacaggaaggct 251 Query: 205 gtggtcatccacgtcccgtacaggctccgcaagtccttcaggaagatccacgtcaggctc 264 ||||| |||||||| |||||| | || |||||| | |||| ||| ||||| |||||||| Sbjct: 252 gtggtgatccacgtgccgtaccgtctgcgcaaggcattcaagaaaatccatgtcaggctt 311 Query: 265 gtcagggagctcgagaagaagttcagcggcaaggacgttgttattgttgcaacaaggcgg 324 ||||||||||||||||||||||||||||||||||| || || ||||||||||||||| || Sbjct: 312 gtcagggagctcgagaagaagttcagcggcaaggatgtggtaattgttgcaacaaggagg 371 Query: 325 attgtgaggccacccaaaaaaggttctgctgttgttcgccctcgtacaagaactttgact 384 ||||||||||| ||||| || || || |||||| |||||||| ||||||||| | ||| Sbjct: 372 attgtgaggcctcccaagaagggctcggctgttcagcgccctcgcacaagaactcttact 431 Query: 385 gctgttcatgatggtcttttggaggatgttgtttacccagctgagattgt 434 ||||||||||||||| | ||||||||||| || ||||||||||||||||| Sbjct: 432 gctgttcatgatggtatcttggaggatgtagtctacccagctgagattgt 481
>gb|AY103554.1| Zea mays PCO154340 mRNA sequence Length = 1075 Score = 440 bits (222), Expect = e-120 Identities = 381/434 (87%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 145 atgtacaccgcgaggaagaagatccagaaggagaagggccttgagccctccgagtttgag 204 Query: 85 gactccgtcgcgcaggctttcttcgacctggagaatggcaaccaggagctcaagagcgac 144 |||||||| || ||||||||||| || |||||||| || ||||||||||||||||||||| Sbjct: 205 gactccgttgcccaggctttctttgatctggagaacgggaaccaggagctcaagagcgac 264 Query: 145 gtcaaagacctctacatcaacgccgccttccagatggatgttgcagggaacaggaaggcc 204 |||| ||||| ||||||||| || |||||||||||||| | |||| ||||||||| Sbjct: 265 ctcaaggacctgtacatcaacaatgctatccagatggatgttaccgggagcaggaaggct 324 Query: 205 gtggtcatccacgtcccgtacaggctccgcaagtccttcaggaagatccacgtcaggctc 264 || |||||||||||||| ||| | || |||||| |||||||||||||||| ||||| ||| Sbjct: 325 gttgtcatccacgtcccataccgcctgcgcaaggccttcaggaagatccatgtcagactc 384 Query: 265 gtcagggagctcgagaagaagttcagcggcaaggacgttgttattgttgcaacaaggcgg 324 ||||||||||| |||||||| |||||||||||||| || || |||||||| |||||| || Sbjct: 385 gtcagggagctggagaagaaattcagcggcaaggatgtggtaattgttgctacaaggagg 444 Query: 325 attgtgaggccacccaaaaaaggttctgctgttgttcgccctcgtacaagaactttgact 384 ||||||||||||||||| || ||||| |||||| | |||||||| || || ||| ||||| Sbjct: 445 attgtgaggccacccaagaagggttcagctgttctgcgccctcgcaccaggactctgact 504 Query: 385 gctgttcatgatggtcttttggaggatgttgtttacccagctgagattgtggggaaacgt 444 |||||||| ||||| | |||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 505 gctgttcacgatggcatcttggaggatgttgtctacccagctgagattgtggggaagcgt 564 Query: 445 gtcagatatcgtct 458 |||||||| ||||| Sbjct: 565 gtcagataccgtct 578
>dbj|AK061276.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E11, full insert sequence Length = 811 Score = 323 bits (163), Expect = 3e-85 Identities = 247/275 (89%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 83 atgtacaccgcgaggaagaagatccagaaggagaagggcctcgagccctccgagttcgag 142 Query: 85 gactccgtcgcgcaggctttcttcgacctggagaatggcaaccaggagctcaagagcgac 144 ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 143 gactccgtcgcgcaggctttctttgacctcgagaatggcaaccaggagctcaagagcgag 202 Query: 145 gtcaaagacctctacatcaacgccgccttccagatggatgttgcagggaacaggaaggcc 204 |||| ||||| ||||||||| || ||||||||||| |||| |||||||||||||| Sbjct: 203 ctcaaggacctgtacatcaacaatgcagtccagatggatattgccgggaacaggaaggct 262 Query: 205 gtggtcatccacgtcccgtacaggctccgcaagtccttcaggaagatccacgtcaggctc 264 ||||| || ||||| |||||| | || |||||| | |||| ||| ||||| |||||||| Sbjct: 263 gtggtgattcacgtgccgtaccgtctgcgcaaggcattcaagaaaatccatgtcaggctt 322 Query: 265 gtcagggagctcgagaagaagttcagcggcaagga 299 ||||||||||||||||||||||||||||||||||| Sbjct: 323 gtcagggagctcgagaagaagttcagcggcaagga 357 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 403 ttggaggatgttgtttacccagctgagattgt 434 ||||| ||||| || ||||||||||||||||| Sbjct: 373 ttggaagatgtagtctacccagctgagattgt 404
>gb|BT017481.1| Zea mays clone EL01N0409H01.c mRNA sequence Length = 840 Score = 278 bits (140), Expect = 2e-71 Identities = 338/404 (83%) Strand = Plus / Plus Query: 37 aggaagaagatccagaaggacaagggcctcgagccctccgagttcgaggactccgtcgcg 96 ||||||||||||||||| || ||||| || ||||||||| ||||||||| ||||| || Sbjct: 81 aggaagaagatccagaacgagaaggggcttgagccctccaagttcgagggctccgatgcc 140 Query: 97 caggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctc 156 ||||||||||| || |||||||| || ||||||||| ||||||||||| |||| ||||| Sbjct: 141 caggctttctttgatctggagaacgggaaccaggaggtcaagagcgacctcaaggacctg 200 Query: 157 tacatcaacgccgccttccagatggatgttgcagggaacaggaaggccgtggtcatccac 216 ||||||||| || |||||||||||||| | |||| |||||||| | ||||||||| Sbjct: 201 tacatcaacaatgctatccagatggatgttaccgggagcaggaagggtgatgtcatccac 260 Query: 217 gtcccgtacaggctccgcaagtccttcaggaagatccacgtcaggctcgtcagggagctc 276 ||||| ||| | || |||||| ||||||||||||||| ||||| ||| |||||||||| Sbjct: 261 gtcccataccgtctgcgcaagggcttcaggaagatccatgtcagactcttcagggagctg 320 Query: 277 gagaagaagttcagcggcaaggacgttgttattgttgcaacaaggcggattgtgaggcca 336 |||||||| |||| ||| ||||| || || |||||||| |||||| ||||||||||| || Sbjct: 321 gagaagaaattcatcgggaaggatgtggtaattgttgctacaagggggattgtgagggca 380 Query: 337 cccaaaaaaggttctgctgttgttcgccctcgtacaagaactttgactgctgttcatgat 396 |||| || || || |||||| | |||||| | || || ||| ||||||||||||| ||| Sbjct: 381 cccacgaaggggtcagctgttctgcgccctaggaccaggactgtgactgctgttcacgat 440 Query: 397 ggtcttttggaggatgttgtttacccagctgagattgtggggaa 440 || |||||||||||||||| |||||| ||||||||| |||||| Sbjct: 441 ggcattttggaggatgttgtctacccaactgagattgaggggaa 484
>gb|AF529175.1| Oryza sativa (japonica cultivar-group) ribosomal protein S7 (RPS7) mRNA, complete cds Length = 919 Score = 143 bits (72), Expect = 6e-31 Identities = 330/416 (79%) Strand = Plus / Plus Query: 37 aggaagaagatccagaaggacaagggcctcgagccctccgagttcgaggactccgtcgcg 96 |||| ||||||||||||||||||||| || ||||| | ||||| |||||| | || || Sbjct: 115 aggaggaagatccagaaggacaagggtctggagccaactgagtttgaggacactgttgct 174 Query: 97 caggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctc 156 ||||| || || ||||| |||||||| || |||||||| ||||| ||| | || ||||| Sbjct: 175 caggcattttttgaccttgagaatgggaatcaggagctgaagagtgacttgaaggacctt 234 Query: 157 tacatcaacgccgccttccagatggatgttgcagggaacaggaaggccgtggtcatccac 216 |||||||| | || | ||||||||| | | || ||||||||||| || | || || Sbjct: 235 tacatcaatggagcagttcagatggatttacctggcaacaggaaggctgttattattcat 294 Query: 217 gtcccgtacaggctccgcaagtccttcaggaagatccacgtcaggctcgtcagggagctc 276 || || |||||||| || ||| | | | ||||||||| || ||||| || ||||| || Sbjct: 295 gttccatacaggctgcggaaggcatataagaagatccatgtgaggcttgttagggaactt 354 Query: 277 gagaagaagttcagcggcaaggacgttgttattgttgcaacaaggcggattgtgaggcca 336 |||||||| ||||| || ||||| || ||| | |||||||| || | || |||||||| Sbjct: 355 gagaagaaattcagtgggaaggatgtggttctggttgcaactagaagaatagtgaggccc 414 Query: 337 cccaaaaaaggttctgctgttgttcgccctcgtacaagaactttgactgctgttcatgat 396 || || ||||| || |||||||||||||||||||| | || | ||||||||||||||| Sbjct: 415 ccaaagaaaggctcagctgttgttcgccctcgtacccgcacacttactgctgttcatgat 474 Query: 397 ggtcttttggaggatgttgtttacccagctgagattgtggggaaacgtgtcagata 452 || | |||||||||||||| || ||||| |||||||| ||||| ||||||||||| Sbjct: 475 ggcatcttggaggatgttgtgtatccagcagagattgttgggaagcgtgtcagata 530
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 4e-29 Identities = 111/125 (88%) Strand = Plus / Plus Query: 174 ccagatggatgttgcagggaacaggaaggccgtggtcatccacgtcccgtacaggctccg 233 |||||||||| |||| |||||||||||||| ||||| |||||||| |||||| | || || Sbjct: 10366211 ccagatggatattgccgggaacaggaaggctgtggtgatccacgtgccgtaccgtctgcg 10366270 Query: 234 caagtccttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcgg 293 |||| | |||| ||| ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 10366271 caaggcattcaagaaaatccatgtcaggcttgtcagggagctcgagaagaagttcagcgg 10366330 Query: 294 caagg 298 ||||| Sbjct: 10366331 caagg 10366335 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10370102 atgtacaccgcgaggaagaagatccagaaggagaagggcctcgagccctccgagttcgag 10370161 Query: 85 gactccgtcgcgcagg 100 |||||||||||||||| Sbjct: 10370162 gactccgtcgcgcagg 10370177 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10365862 atgtacaccgcgaggaagaagatccagaaggagaagggcctcgagccctccgagttcgag 10365921 Query: 85 gactccgtcgcgcagg 100 |||||||||||||||| Sbjct: 10365922 gactccgtcgcgcagg 10365937 Score = 129 bits (65), Expect = 9e-27 Identities = 110/125 (88%) Strand = Plus / Plus Query: 174 ccagatggatgttgcagggaacaggaaggccgtggtcatccacgtcccgtacaggctccg 233 |||||||||| |||| |||||||||||||| ||||| || ||||| |||||| | || || Sbjct: 10370455 ccagatggatattgccgggaacaggaaggctgtggtgattcacgtgccgtaccgtctgcg 10370514 Query: 234 caagtccttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcgg 293 |||| | |||| ||| ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 10370515 caaggcattcaagaaaatccatgtcaggcttgtcagggagctcgagaagaagttcagcgg 10370574 Query: 294 caagg 298 ||||| Sbjct: 10370575 caagg 10370579 Score = 127 bits (64), Expect = 3e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 307 attgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccct 366 ||||||||||||||| ||||||||||||| ||||| || || || |||||| |||||| Sbjct: 10366955 attgttgcaacaaggaggattgtgaggcctcccaagaagggctcggctgttcagcgccct 10367014 Query: 367 cgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagct 426 || ||||||||| | |||||||||||||||||| | ||||||||||| || ||||||||| Sbjct: 10367015 cgcacaagaactcttactgctgttcatgatggtatcttggaggatgtagtctacccagct 10367074 Query: 427 gagattgt 434 |||||||| Sbjct: 10367075 gagattgt 10367082 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 307 attgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccct 366 ||||||||||||||| ||||||||||||| ||||| || || || |||||| |||||| Sbjct: 10371210 attgttgcaacaaggaggattgtgaggcctcccaagaagggctcggctgttcagcgccct 10371269 Query: 367 cgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagct 426 || ||||||||| | || |||||||||||| || | ||||||||||| || ||||||||| Sbjct: 10371270 cgcacaagaactcttaccgctgttcatgattgtatcttggaggatgtagtctacccagct 10371329 Query: 427 gagattgt 434 |||||||| Sbjct: 10371330 gagattgt 10371337 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 98 aggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctct 157 |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||| | Sbjct: 10370249 aggctttctttgacctcgagaatggcaaccaggagctcaagagcgagctcaaggacctgt 10370308 Query: 158 acatcaac 165 |||||||| Sbjct: 10370309 acatcaac 10370316 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 98 aggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctct 157 |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||| | Sbjct: 10366009 aggctttctttgacctcgagaatggcaaccaggagctcaagagcgagctcaaggacctgt 10366068 Query: 158 acatcaac 165 |||||||| Sbjct: 10366069 acatcaac 10366076
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 137 bits (69), Expect = 4e-29 Identities = 111/125 (88%) Strand = Plus / Plus Query: 174 ccagatggatgttgcagggaacaggaaggccgtggtcatccacgtcccgtacaggctccg 233 |||||||||| |||| |||||||||||||| ||||| |||||||| |||||| | || || Sbjct: 22764 ccagatggatattgccgggaacaggaaggctgtggtgatccacgtgccgtaccgtctgcg 22823 Query: 234 caagtccttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcgg 293 |||| | |||| ||| ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 22824 caaggcattcaagaaaatccatgtcaggcttgtcagggagctcgagaagaagttcagcgg 22883 Query: 294 caagg 298 ||||| Sbjct: 22884 caagg 22888 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 26655 atgtacaccgcgaggaagaagatccagaaggagaagggcctcgagccctccgagttcgag 26714 Query: 85 gactccgtcgcgcagg 100 |||||||||||||||| Sbjct: 26715 gactccgtcgcgcagg 26730 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 22415 atgtacaccgcgaggaagaagatccagaaggagaagggcctcgagccctccgagttcgag 22474 Query: 85 gactccgtcgcgcagg 100 |||||||||||||||| Sbjct: 22475 gactccgtcgcgcagg 22490 Score = 129 bits (65), Expect = 9e-27 Identities = 110/125 (88%) Strand = Plus / Plus Query: 174 ccagatggatgttgcagggaacaggaaggccgtggtcatccacgtcccgtacaggctccg 233 |||||||||| |||| |||||||||||||| ||||| || ||||| |||||| | || || Sbjct: 27008 ccagatggatattgccgggaacaggaaggctgtggtgattcacgtgccgtaccgtctgcg 27067 Query: 234 caagtccttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcgg 293 |||| | |||| ||| ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 27068 caaggcattcaagaaaatccatgtcaggcttgtcagggagctcgagaagaagttcagcgg 27127 Query: 294 caagg 298 ||||| Sbjct: 27128 caagg 27132 Score = 127 bits (64), Expect = 3e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 307 attgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccct 366 ||||||||||||||| ||||||||||||| ||||| || || || |||||| |||||| Sbjct: 23508 attgttgcaacaaggaggattgtgaggcctcccaagaagggctcggctgttcagcgccct 23567 Query: 367 cgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagct 426 || ||||||||| | |||||||||||||||||| | ||||||||||| || ||||||||| Sbjct: 23568 cgcacaagaactcttactgctgttcatgatggtatcttggaggatgtagtctacccagct 23627 Query: 427 gagattgt 434 |||||||| Sbjct: 23628 gagattgt 23635 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 307 attgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccct 366 ||||||||||||||| ||||||||||||| ||||| || || || |||||| |||||| Sbjct: 27763 attgttgcaacaaggaggattgtgaggcctcccaagaagggctcggctgttcagcgccct 27822 Query: 367 cgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagct 426 || ||||||||| | || |||||||||||| || | ||||||||||| || ||||||||| Sbjct: 27823 cgcacaagaactcttaccgctgttcatgattgtatcttggaggatgtagtctacccagct 27882 Query: 427 gagattgt 434 |||||||| Sbjct: 27883 gagattgt 27890 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 98 aggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctct 157 |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||| | Sbjct: 26802 aggctttctttgacctcgagaatggcaaccaggagctcaagagcgagctcaaggacctgt 26861 Query: 158 acatcaac 165 |||||||| Sbjct: 26862 acatcaac 26869 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 98 aggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctct 157 |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||| | Sbjct: 22562 aggctttctttgacctcgagaatggcaaccaggagctcaagagcgagctcaaggacctgt 22621 Query: 158 acatcaac 165 |||||||| Sbjct: 22622 acatcaac 22629
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 137 bits (69), Expect = 4e-29 Identities = 111/125 (88%) Strand = Plus / Plus Query: 174 ccagatggatgttgcagggaacaggaaggccgtggtcatccacgtcccgtacaggctccg 233 |||||||||| |||| |||||||||||||| ||||| |||||||| |||||| | || || Sbjct: 79677 ccagatggatattgccgggaacaggaaggctgtggtgatccacgtgccgtaccgtctgcg 79736 Query: 234 caagtccttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcgg 293 |||| | |||| ||| ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 79737 caaggcattcaagaaaatccatgtcaggcttgtcagggagctcgagaagaagttcagcgg 79796 Query: 294 caagg 298 ||||| Sbjct: 79797 caagg 79801 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 83568 atgtacaccgcgaggaagaagatccagaaggagaagggcctcgagccctccgagttcgag 83627 Query: 85 gactccgtcgcgcagg 100 |||||||||||||||| Sbjct: 83628 gactccgtcgcgcagg 83643 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 79328 atgtacaccgcgaggaagaagatccagaaggagaagggcctcgagccctccgagttcgag 79387 Query: 85 gactccgtcgcgcagg 100 |||||||||||||||| Sbjct: 79388 gactccgtcgcgcagg 79403 Score = 129 bits (65), Expect = 9e-27 Identities = 110/125 (88%) Strand = Plus / Plus Query: 174 ccagatggatgttgcagggaacaggaaggccgtggtcatccacgtcccgtacaggctccg 233 |||||||||| |||| |||||||||||||| ||||| || ||||| |||||| | || || Sbjct: 83921 ccagatggatattgccgggaacaggaaggctgtggtgattcacgtgccgtaccgtctgcg 83980 Query: 234 caagtccttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcgg 293 |||| | |||| ||| ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 83981 caaggcattcaagaaaatccatgtcaggcttgtcagggagctcgagaagaagttcagcgg 84040 Query: 294 caagg 298 ||||| Sbjct: 84041 caagg 84045 Score = 127 bits (64), Expect = 3e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 307 attgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccct 366 ||||||||||||||| ||||||||||||| ||||| || || || |||||| |||||| Sbjct: 80421 attgttgcaacaaggaggattgtgaggcctcccaagaagggctcggctgttcagcgccct 80480 Query: 367 cgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagct 426 || ||||||||| | |||||||||||||||||| | ||||||||||| || ||||||||| Sbjct: 80481 cgcacaagaactcttactgctgttcatgatggtatcttggaggatgtagtctacccagct 80540 Query: 427 gagattgt 434 |||||||| Sbjct: 80541 gagattgt 80548 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 307 attgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccct 366 ||||||||||||||| ||||||||||||| ||||| || || || |||||| |||||| Sbjct: 84676 attgttgcaacaaggaggattgtgaggcctcccaagaagggctcggctgttcagcgccct 84735 Query: 367 cgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagct 426 || ||||||||| | || |||||||||||| || | ||||||||||| || ||||||||| Sbjct: 84736 cgcacaagaactcttaccgctgttcatgattgtatcttggaggatgtagtctacccagct 84795 Query: 427 gagattgt 434 |||||||| Sbjct: 84796 gagattgt 84803 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 98 aggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctct 157 |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||| | Sbjct: 83715 aggctttctttgacctcgagaatggcaaccaggagctcaagagcgagctcaaggacctgt 83774 Query: 158 acatcaac 165 |||||||| Sbjct: 83775 acatcaac 83782 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 98 aggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctct 157 |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||| | Sbjct: 79475 aggctttctttgacctcgagaatggcaaccaggagctcaagagcgagctcaaggacctgt 79534 Query: 158 acatcaac 165 |||||||| Sbjct: 79535 acatcaac 79542
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 4e-29 Identities = 111/125 (88%) Strand = Plus / Plus Query: 174 ccagatggatgttgcagggaacaggaaggccgtggtcatccacgtcccgtacaggctccg 233 |||||||||| |||| |||||||||||||| ||||| |||||||| |||||| | || || Sbjct: 10364312 ccagatggatattgccgggaacaggaaggctgtggtgatccacgtgccgtaccgtctgcg 10364371 Query: 234 caagtccttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcgg 293 |||| | |||| ||| ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 10364372 caaggcattcaagaaaatccatgtcaggcttgtcagggagctcgagaagaagttcagcgg 10364431 Query: 294 caagg 298 ||||| Sbjct: 10364432 caagg 10364436 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10368203 atgtacaccgcgaggaagaagatccagaaggagaagggcctcgagccctccgagttcgag 10368262 Query: 85 gactccgtcgcgcagg 100 |||||||||||||||| Sbjct: 10368263 gactccgtcgcgcagg 10368278 Score = 135 bits (68), Expect = 1e-28 Identities = 74/76 (97%) Strand = Plus / Plus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10363963 atgtacaccgcgaggaagaagatccagaaggagaagggcctcgagccctccgagttcgag 10364022 Query: 85 gactccgtcgcgcagg 100 |||||||||||||||| Sbjct: 10364023 gactccgtcgcgcagg 10364038 Score = 129 bits (65), Expect = 9e-27 Identities = 110/125 (88%) Strand = Plus / Plus Query: 174 ccagatggatgttgcagggaacaggaaggccgtggtcatccacgtcccgtacaggctccg 233 |||||||||| |||| |||||||||||||| ||||| || ||||| |||||| | || || Sbjct: 10368556 ccagatggatattgccgggaacaggaaggctgtggtgattcacgtgccgtaccgtctgcg 10368615 Query: 234 caagtccttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcgg 293 |||| | |||| ||| ||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 10368616 caaggcattcaagaaaatccatgtcaggcttgtcagggagctcgagaagaagttcagcgg 10368675 Query: 294 caagg 298 ||||| Sbjct: 10368676 caagg 10368680 Score = 127 bits (64), Expect = 3e-26 Identities = 112/128 (87%) Strand = Plus / Plus Query: 307 attgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccct 366 ||||||||||||||| ||||||||||||| ||||| || || || |||||| |||||| Sbjct: 10365056 attgttgcaacaaggaggattgtgaggcctcccaagaagggctcggctgttcagcgccct 10365115 Query: 367 cgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagct 426 || ||||||||| | |||||||||||||||||| | ||||||||||| || ||||||||| Sbjct: 10365116 cgcacaagaactcttactgctgttcatgatggtatcttggaggatgtagtctacccagct 10365175 Query: 427 gagattgt 434 |||||||| Sbjct: 10365176 gagattgt 10365183 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 307 attgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccct 366 ||||||||||||||| ||||||||||||| ||||| || || || |||||| |||||| Sbjct: 10369311 attgttgcaacaaggaggattgtgaggcctcccaagaagggctcggctgttcagcgccct 10369370 Query: 367 cgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagct 426 || ||||||||| | || |||||||||||| || | ||||||||||| || ||||||||| Sbjct: 10369371 cgcacaagaactcttaccgctgttcatgattgtatcttggaggatgtagtctacccagct 10369430 Query: 427 gagattgt 434 |||||||| Sbjct: 10369431 gagattgt 10369438 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 98 aggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctct 157 |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||| | Sbjct: 10368350 aggctttctttgacctcgagaatggcaaccaggagctcaagagcgagctcaaggacctgt 10368409 Query: 158 acatcaac 165 |||||||| Sbjct: 10368410 acatcaac 10368417 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 98 aggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctct 157 |||||||||| ||||| ||||||||||||||||||||||||||||| |||| ||||| | Sbjct: 10364110 aggctttctttgacctcgagaatggcaaccaggagctcaagagcgagctcaaggacctgt 10364169 Query: 158 acatcaac 165 |||||||| Sbjct: 10364170 acatcaac 10364177
>ref|XM_465276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 339 Score = 119 bits (60), Expect = 8e-24 Identities = 144/172 (83%) Strand = Plus / Plus Query: 241 ttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcggcaaggac 300 |||| ||| ||||| || ||||| |||| |||||| |||||||||||||| |||||||| Sbjct: 64 ttcaagaaaatccatgttaggcttgtcaaggagcttgagaagaagttcagtggcaaggat 123 Query: 301 gttgttattgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgtt 360 || || ||| |||||||||| ||||||||||||| | ||| || ||||| |||||| | Sbjct: 124 gtggtctttgatgcaacaaggaggattgtgaggcctctcaataagggttcagctgttcat 183 Query: 361 cgccctcgtacaagaactttgactgctgttcatgatggtcttttggaggatg 412 | ||||||||||||||||||| | ||||||||||||| | |||||||||| Sbjct: 184 catcctcgtacaagaactttgattactgttcatgatggaatcttggaggatg 235
>dbj|AK104191.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C09, full insert sequence Length = 910 Score = 117 bits (59), Expect = 3e-23 Identities = 170/207 (82%) Strand = Plus / Plus Query: 246 gaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcggcaaggacgttgt 305 ||||||||| || ||||| || ||||| || |||||||| ||||| || ||||| || || Sbjct: 335 gaagatccatgtgaggcttgttagggaacttgagaagaaattcagtgggaaggatgtggt 394 Query: 306 tattgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccc 365 | | |||||||| || | || |||||||| || || ||||| || |||||||||||||| Sbjct: 395 tctggttgcaactagaagaatagtgaggcccccaaagaaaggctcagctgttgttcgccc 454 Query: 366 tcgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagc 425 |||||| | || | ||||||||||||||||| | |||||||||||||| || ||||| Sbjct: 455 tcgtacccgcacacttactgctgttcatgatggcatcttggaggatgttgtgtatccagc 514 Query: 426 tgagattgtggggaaacgtgtcagata 452 |||||||| ||||| ||||||||||| Sbjct: 515 agagattgttgggaagcgtgtcagata 541 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 37 aggaagaagatccagaaggacaagggcctcgagccctccgagttcgaggactccgtcgcg 96 |||| ||||||||||||||||||||| || ||||| | ||||| |||||| | || || Sbjct: 126 aggaggaagatccagaaggacaagggtctggagccaactgagtttgaggacactgttgct 185 Query: 97 caggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctc 156 ||||| || || ||||| |||||||| || |||||||| ||||| ||| | || ||||| Sbjct: 186 caggcattttttgaccttgagaatgggaatcaggagctgaagagtgacttgaaggacctt 245 Query: 157 tacatcaa 164 |||||||| Sbjct: 246 tacatcaa 253
>dbj|AK103081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118F01, full insert sequence Length = 903 Score = 117 bits (59), Expect = 3e-23 Identities = 170/207 (82%) Strand = Plus / Plus Query: 246 gaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcggcaaggacgttgt 305 ||||||||| || ||||| || ||||| || |||||||| ||||| || ||||| || || Sbjct: 335 gaagatccatgtgaggcttgttagggaacttgagaagaaattcagtgggaaggatgtggt 394 Query: 306 tattgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccc 365 | | |||||||| || | || |||||||| || || ||||| || |||||||||||||| Sbjct: 395 tctggttgcaactagaagaatagtgaggcccccaaagaaaggctcagctgttgttcgccc 454 Query: 366 tcgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagc 425 |||||| | || | ||||||||||||||||| | |||||||||||||| || ||||| Sbjct: 455 tcgtacccgcacacttactgctgttcatgatggcatcttggaggatgttgtgtatccagc 514 Query: 426 tgagattgtggggaaacgtgtcagata 452 |||||||| ||||| ||||||||||| Sbjct: 515 agagattgttgggaagcgtgtcagata 541 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 37 aggaagaagatccagaaggacaagggcctcgagccctccgagttcgaggactccgtcgcg 96 |||| ||||||||||||||||||||| || ||||| | ||||| |||||| | || || Sbjct: 126 aggaggaagatccagaaggacaagggtctggagccaactgagtttgaggacactgttgct 185 Query: 97 caggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctc 156 ||||| || || ||||| |||||||| || |||||||| ||||| ||| | || ||||| Sbjct: 186 caggcattttttgaccttgagaatgggaatcaggagctgaagagtgacttgaaggacctt 245 Query: 157 tacatcaa 164 |||||||| Sbjct: 246 tacatcaa 253
>dbj|AK061627.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B02, full insert sequence Length = 910 Score = 117 bits (59), Expect = 3e-23 Identities = 170/207 (82%) Strand = Plus / Plus Query: 246 gaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcggcaaggacgttgt 305 ||||||||| || ||||| || ||||| || |||||||| ||||| || ||||| || || Sbjct: 335 gaagatccatgtgaggcttgttagggaacttgagaagaaattcagtgggaaggatgtggt 394 Query: 306 tattgttgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccc 365 | | |||||||| || | || |||||||| || || ||||| || |||||||||||||| Sbjct: 395 tctggttgcaactagaagaatagtgaggcccccaaagaaaggctcagctgttgttcgccc 454 Query: 366 tcgtacaagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagc 425 |||||| | || | ||||||||||||||||| | |||||||||||||| || ||||| Sbjct: 455 tcgtacccgcacacttactgctgttcatgatggcatcttggaggatgttgtgtatccagc 514 Query: 426 tgagattgtggggaaacgtgtcagata 452 |||||||| ||||| ||||||||||| Sbjct: 515 agagattgttgggaagcgtgtcagata 541 Score = 71.9 bits (36), Expect = 2e-09 Identities = 105/128 (82%) Strand = Plus / Plus Query: 37 aggaagaagatccagaaggacaagggcctcgagccctccgagttcgaggactccgtcgcg 96 |||| ||||||||||||||||||||| || ||||| | ||||| |||||| | || || Sbjct: 126 aggaggaagatccagaaggacaagggtctggagccaactgagtttgaggacactgttgct 185 Query: 97 caggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctc 156 ||||| || || ||||| |||||||| || |||||||| ||||| ||| | || ||||| Sbjct: 186 caggcattttttgaccttgagaatgggaatcaggagctgaagagtgacttgaaggacctt 245 Query: 157 tacatcaa 164 |||||||| Sbjct: 246 tacatcaa 253
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Minus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 13025965 atgtacactgcgaggaagaagatccagaaggagaagggcctatagccctccgagttcgag 13025906 Query: 85 gactccgtc 93 ||||||||| Sbjct: 13025905 gactccgtc 13025897 Score = 97.6 bits (49), Expect = 3e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 312 tgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccctcgtac 371 |||||||||| ||||||||||||| | ||| || ||||| |||||| || |||||||| Sbjct: 13024786 tgcaacaaggaggattgtgaggcctctcaataagggttcagctgttcatcatcctcgtac 13024727 Query: 372 aagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagctgagat 431 ||||||||||| | ||||||||||||| | ||||||||||| || | |||||||||||| Sbjct: 13024726 aagaactttgattactgttcatgatggaatcttggaggatgtagtct-cccagctgagat 13024668 Query: 432 tgtggggaa 440 ||| ||||| Sbjct: 13024667 tgttgggaa 13024659 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 241 ttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcggcaagg 298 |||| ||| ||||| || ||||| |||| |||||| |||||||||||||| ||||||| Sbjct: 13025481 ttcaagaaaatccatgttaggcttgtcaaggagcttgagaagaagttcagtggcaagg 13025424 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 102 tttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctctacat 161 |||||| ||||| |||||||| ||||| ||||||||||||| |||| ||| ||||||| Sbjct: 13025744 tttctttgacctcgagaatggaaaccattagctcaagagcgagctcaaggacatctacat 13025685 Query: 162 c 162 | Sbjct: 13025684 c 13025684
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Minus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 135608 atgtacactgcgaggaagaagatccagaaggagaagggcctatagccctccgagttcgag 135549 Query: 85 gactccgtc 93 ||||||||| Sbjct: 135548 gactccgtc 135540 Score = 97.6 bits (49), Expect = 3e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 312 tgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccctcgtac 371 |||||||||| ||||||||||||| | ||| || ||||| |||||| || |||||||| Sbjct: 134429 tgcaacaaggaggattgtgaggcctctcaataagggttcagctgttcatcatcctcgtac 134370 Query: 372 aagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagctgagat 431 ||||||||||| | ||||||||||||| | ||||||||||| || | |||||||||||| Sbjct: 134369 aagaactttgattactgttcatgatggaatcttggaggatgtagtct-cccagctgagat 134311 Query: 432 tgtggggaa 440 ||| ||||| Sbjct: 134310 tgttgggaa 134302 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 241 ttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcggcaagg 298 |||| ||| ||||| || ||||| |||| |||||| |||||||||||||| ||||||| Sbjct: 135124 ttcaagaaaatccatgttaggcttgtcaaggagcttgagaagaagttcagtggcaagg 135067 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 102 tttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctctacat 161 |||||| ||||| |||||||| ||||| ||||||||||||| |||| ||| ||||||| Sbjct: 135387 tttctttgacctcgagaatggaaaccattagctcaagagcgagctcaaggacatctacat 135328 Query: 162 c 162 | Sbjct: 135327 c 135327
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Minus Query: 25 atgtacacggcgaggaagaagatccagaaggacaagggcctcgagccctccgagttcgag 84 |||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2542 atgtacactgcgaggaagaagatccagaaggagaagggcctatagccctccgagttcgag 2483 Query: 85 gactccgtc 93 ||||||||| Sbjct: 2482 gactccgtc 2474 Score = 97.6 bits (49), Expect = 3e-17 Identities = 110/129 (85%), Gaps = 1/129 (0%) Strand = Plus / Minus Query: 312 tgcaacaaggcggattgtgaggccacccaaaaaaggttctgctgttgttcgccctcgtac 371 |||||||||| ||||||||||||| | ||| || ||||| |||||| || |||||||| Sbjct: 1363 tgcaacaaggaggattgtgaggcctctcaataagggttcagctgttcatcatcctcgtac 1304 Query: 372 aagaactttgactgctgttcatgatggtcttttggaggatgttgtttacccagctgagat 431 ||||||||||| | ||||||||||||| | ||||||||||| || | |||||||||||| Sbjct: 1303 aagaactttgattactgttcatgatggaatcttggaggatgtagtct-cccagctgagat 1245 Query: 432 tgtggggaa 440 ||| ||||| Sbjct: 1244 tgttgggaa 1236 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 241 ttcaggaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcggcaagg 298 |||| ||| ||||| || ||||| |||| |||||| |||||||||||||| ||||||| Sbjct: 2058 ttcaagaaaatccatgttaggcttgtcaaggagcttgagaagaagttcagtggcaagg 2001 Score = 50.1 bits (25), Expect = 0.006 Identities = 52/61 (85%) Strand = Plus / Minus Query: 102 tttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctctacat 161 |||||| ||||| |||||||| ||||| ||||||||||||| |||| ||| ||||||| Sbjct: 2321 tttctttgacctcgagaatggaaaccattagctcaagagcgagctcaaggacatctacat 2262 Query: 162 c 162 | Sbjct: 2261 c 2261
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01, complete sequence Length = 151938 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 328 gtgaggccacccaaaaaaggttctgctgttgttcgccctcgtacaagaactttgactgct 387 |||||||| || || ||||| || |||||||||||||||||||| | || | |||||| Sbjct: 15745 gtgaggcccccaaagaaaggctcagctgttgttcgccctcgtacccgcacacttactgct 15686 Query: 388 gttcatgatggtcttttggaggatgttgtttacccagctgagattgtggggaaacgtgtc 447 ||||||||||| | |||||||||||||| || ||||| |||||||| ||||| |||||| Sbjct: 15685 gttcatgatggcatcttggaggatgttgtgtatccagcagagattgttgggaagcgtgtc 15626 Query: 448 agata 452 ||||| Sbjct: 15625 agata 15621 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 37 aggaagaagatccagaaggacaagggcctcgagcc 71 |||| ||||||||||||||||||||| || ||||| Sbjct: 17087 aggaggaagatccagaaggacaagggtctggagcc 17053
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05, complete sequence Length = 143400 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 328 gtgaggccacccaaaaaaggttctgctgttgttcgccctcgtacaagaactttgactgct 387 |||||||| || || ||||| || |||||||||||||||||||| | || | |||||| Sbjct: 119558 gtgaggcccccaaagaaaggctcagctgttgttcgccctcgtacccgcacacttactgct 119499 Query: 388 gttcatgatggtcttttggaggatgttgtttacccagctgagattgtggggaaacgtgtc 447 ||||||||||| | |||||||||||||| || ||||| |||||||| ||||| |||||| Sbjct: 119498 gttcatgatggcatcttggaggatgttgtgtatccagcagagattgttgggaagcgtgtc 119439 Query: 448 agata 452 ||||| Sbjct: 119438 agata 119434 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 37 aggaagaagatccagaaggacaagggcctcgagcc 71 |||| ||||||||||||||||||||| || ||||| Sbjct: 120900 aggaggaagatccagaaggacaagggtctggagcc 120866
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 328 gtgaggccacccaaaaaaggttctgctgttgttcgccctcgtacaagaactttgactgct 387 |||||||| || || ||||| || |||||||||||||||||||| | || | |||||| Sbjct: 16168388 gtgaggcccccaaagaaaggctcagctgttgttcgccctcgtacccgcacacttactgct 16168329 Query: 388 gttcatgatggtcttttggaggatgttgtttacccagctgagattgtggggaaacgtgtc 447 ||||||||||| | |||||||||||||| || ||||| |||||||| ||||| |||||| Sbjct: 16168328 gttcatgatggcatcttggaggatgttgtgtatccagcagagattgttgggaagcgtgtc 16168269 Query: 448 agata 452 ||||| Sbjct: 16168268 agata 16168264 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Minus Query: 37 aggaagaagatccagaaggacaagggcctcgagcc 71 |||| ||||||||||||||||||||| || ||||| Sbjct: 16169730 aggaggaagatccagaaggacaagggtctggagcc 16169696
>gb|BT009440.1| Triticum aestivum clone wlmk4.pk0019.f5:fis, full insert mRNA sequence Length = 1907 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 99 ggctttcttcgacctggagaatggcaaccaggagctcaagag 140 ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1595 ggctttctttgacctggagaatggcaaccaggagctcaagag 1636
>ref|XM_784661.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S7 (S8) (LOC584812), mRNA Length = 667 Score = 63.9 bits (32), Expect = 4e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 246 gaagatccacgtcaggctcgtcagggagctcgagaagaagttcagcggcaag 297 ||||||||| |||||||| ||| | ||||| ||||||||||||||||||||| Sbjct: 239 gaagatccaggtcaggctagtccgagagcttgagaagaagttcagcggcaag 290
>emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17 on chromosome 3, complete sequence Length = 122868 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 247 aagatccacgtcaggctcgtcagggagctcgagaagaagttcagcggcaagg 298 ||||| || |||||||| || ||||||||||||||||| |||||||| |||| Sbjct: 45441 aagattcatgtcaggcttgttagggagctcgagaagaaattcagcggaaagg 45492
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 268 agggagctcgagaagaagttcagcggcaagg 298 ||||||||||||||||||||||| ||||||| Sbjct: 125674 agggagctcgagaagaagttcagtggcaagg 125704 Score = 42.1 bits (21), Expect = 1.6 Identities = 57/69 (82%) Strand = Plus / Plus Query: 97 caggctttcttcgacctggagaatggcaaccaggagctcaagagcgacgtcaaagacctc 156 ||||||||||| || ||||||||| |||||||||| | || ||||| | ||||| || Sbjct: 125409 caggctttctttgatctggagaataccaaccaggagttgaaaagcgatttgaaagatctg 125468 Query: 157 tacatcaac 165 ||||||||| Sbjct: 125469 tacatcaac 125477
>gb|AF056316.1|AF056316 Avicennia marina 40S ribosome protein S7 mRNA, complete cds Length = 833 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 406 gaggatgttgtttacccagctgagattgtggggaaacgtgtcagata 452 |||||| |||||||||| ||||||||||| || |||||||| ||||| Sbjct: 447 gaggatattgtttaccctgctgagattgttggaaaacgtgttagata 493 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 258 caggctcgtcagggagctcgagaagaagttcagcggcaaggacgttgtt 306 |||||| || |||||||| || |||||||||||||| ||||| |||||| Sbjct: 299 caggctggtgagggagcttgaaaagaagttcagcggaaaggaagttgtt 347
>gb|AF098519.1|AF098519 Avicennia marina unknown mRNA Length = 833 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 406 gaggatgttgtttacccagctgagattgtggggaaacgtgtcagata 452 |||||| |||||||||| ||||||||||| || |||||||| ||||| Sbjct: 447 gaggatattgtttaccctgctgagattgttggaaaacgtgttagata 493 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Plus Query: 258 caggctcgtcagggagctcgagaagaagttcagcggcaaggacgttgtt 306 |||||| || |||||||| || |||||||||||||| ||||| |||||| Sbjct: 299 caggctggtgagggagcttgaaaagaagttcagcggaaaggaagttgtt 347
>ref|XM_716679.1| Candida albicans SC5314 putative cytosolic ribosomal protein S7 (CaO19_1700), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 371 caagaactttgactgctgttcatgat 396 |||||||||||||||||||||||||| Sbjct: 332 caagaactttgactgctgttcatgat 357
>ref|XM_716558.1| Candida albicans SC5314 putative cytosolic ribosomal protein S7 (CaO19_9267), mRNA Length = 561 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 371 caagaactttgactgctgttcatgat 396 |||||||||||||||||||||||||| Sbjct: 332 caagaactttgactgctgttcatgat 357
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 268 agggagctcgagaagaagttcagcggcaagg 298 |||||||| |||||||||||||| ||||||| Sbjct: 142858 agggagctggagaagaagttcagtggcaagg 142888
>emb|X94942.1|FRRPS7U17 F.rubripes rpS7 and snoRNA U17 genes Length = 4298 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 268 agggagctcgagaagaagttcagcggcaaggacgt 302 |||||||| ||||||||||||||||| ||| |||| Sbjct: 1969 agggagctggagaagaagttcagcggaaagcacgt 2003
>ref|XM_309625.2| Anopheles gambiae str. PEST ENSANGP00000004072 (ENSANGG00000003234), partial mRNA Length = 1989 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 38 ggaagaagatccagaaggacaag 60 ||||||||||||||||||||||| Sbjct: 1538 ggaagaagatccagaaggacaag 1560
>ref|NM_121618.2| Arabidopsis thaliana structural constituent of ribosome AT5G16130 mRNA, complete cds Length = 878 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 262 ctcgtcagggagctcgagaagaagttcagcggcaagga 299 |||||||| ||||| |||||||||||||| || ||||| Sbjct: 367 ctcgtcagagagcttgagaagaagttcagtggaaagga 404
>ref|XM_963054.1| PREDICTED: Tribolium castaneum similar to CG1883-PA, isoform A (LOC656528), mRNA Length = 653 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 277 gagaagaagttcagcggcaaggacgttgtt 306 |||||||||||||||||||| |||||||| Sbjct: 278 gagaagaagttcagcggcaaacacgttgtt 307
>gb|AF402815.1| Ictalurus punctatus 40S ribosomal protein S7 mRNA, complete cds Length = 641 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 260 ggctcgtcagggagctcgagaagaagttcagcggcaag 297 ||||||| ||||||| |||||||||||||| |||||| Sbjct: 255 ggctcgtgcgggagctggagaagaagttcagtggcaag 292
>gb|BT024914.1| Arabidopsis thaliana At5g16130 mRNA, complete cds Length = 573 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 262 ctcgtcagggagctcgagaagaagttcagcggcaagga 299 |||||||| ||||| |||||||||||||| || ||||| Sbjct: 238 ctcgtcagagagcttgagaagaagttcagtggaaagga 275
>emb|BX832565.1|CNS09ZKS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 797 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 262 ctcgtcagggagctcgagaagaagttcagcggcaagga 299 |||||||| ||||| |||||||||||||| || ||||| Sbjct: 293 ctcgtcagagagcttgagaagaagttcagtggaaagga 330
>gb|AY086292.1| Arabidopsis thaliana clone 23518 mRNA, complete sequence Length = 872 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 262 ctcgtcagggagctcgagaagaagttcagcggcaagga 299 |||||||| ||||| |||||||||||||| || ||||| Sbjct: 367 ctcgtcagagagcttgagaagaagttcagtggaaagga 404
>gb|AF144752.1|AF144752 Brassica oleracea 40S ribosomal protein S7 homolog mRNA, complete cds Length = 798 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 265 gtcagggagctcgagaagaagttcag 290 ||||| |||||||||||||||||||| Sbjct: 322 gtcagagagctcgagaagaagttcag 347
>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073, complete sequence Length = 90077 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 265 gtcagggagctcgagaagaagttcagcggcaagg 298 ||||||||||| ||||||||||| || ||||||| Sbjct: 14020 gtcagggagcttgagaagaagtttagtggcaagg 14053 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 259 aggctcgtcagggagctcgagaagaagttcagcggcaagg 298 ||||| ||||||||||| |||||||||| || ||||||| Sbjct: 24400 aggctagtcagggagcttaagaagaagtttagtggcaagg 24439 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 424 gctgagattgtggggaaacgtgtcagatatcg 455 ||||||||||| ||||||||||| || ||||| Sbjct: 14732 gctgagattgttgggaaacgtgtgaggtatcg 14763
>emb|AL731836.10| Mouse DNA sequence from clone RP23-119A13 on chromosome 2, complete sequence Length = 83802 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 179 tggatgttgcagggaacaggaaggcc 204 ||||||||||||| |||||||||||| Sbjct: 58370 tggatgttgcaggaaacaggaaggcc 58345
>gb|AY769321.1| Bombyx mori ribosomal protein S7 (RpS7) mRNA, complete cds Length = 657 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 246 gaagatccacgtcaggctcgtcagggagctcgagaagaagttcag 290 ||||||||| ||||||| ||| | |||||||| ||||||||||| Sbjct: 231 gaagatccagatcaggcttgtccgtgagctcgaaaagaagttcag 275
>gb|AF526221.1| Argopecten irradians isolate iolsaicl205ct237cn254 ribosomal protein S7 mRNA, complete cds Length = 651 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 265 gtcagggagctcgagaagaagttcagcgg 293 ||||||||||| || |||||||||||||| Sbjct: 248 gtcagggagctggaaaagaagttcagcgg 276
>emb|AL391148.1|ATT21H19 Arabidopsis thaliana DNA chromosome 5, BAC clone T21H19 (ESSA project) Length = 77311 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 262 ctcgtcagggagctcgagaagaagttcag 290 |||||||| ||||| |||||||||||||| Sbjct: 13409 ctcgtcagagagcttgagaagaagttcag 13437
>gb|DQ377970.1| Populus x canadensis putative 40S ribosomal protein S7 mRNA, partial cds Length = 546 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 37 aggaagaagatccagaaggacaagg 61 |||||||||||||| |||||||||| Sbjct: 66 aggaagaagatccaaaaggacaagg 90
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 cctctacatcaacgccgccttccag 177 |||||||||||| |||||||||||| Sbjct: 12815440 cctctacatcaatgccgccttccag 12815416
>emb|BX822663.1|CNS0A5ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 760 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 406 gaggatgttgtttacccagctgagattgt 434 |||||||||| |||||| ||||||||||| Sbjct: 449 gaggatgttgcttaccctgctgagattgt 477
>gb|AY130375.1| Branchiostoma lanceolatum ribosomal protein S7 mRNA, partial cds Length = 530 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 269 gggagctcgagaagaagttcagcggcaag 297 ||||||| |||||||||||||| |||||| Sbjct: 213 gggagctggagaagaagttcagtggcaag 241
>gb|AC018867.5| Homo sapiens BAC clone RP11-66C4 from 2, complete sequence Length = 78121 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 aggcggattgtgaggccaccc 339 ||||||||||||||||||||| Sbjct: 28396 aggcggattgtgaggccaccc 28376
>dbj|AK173962.1| Ciona intestinalis cDNA, clone:cixxx00042, full insert sequence Length = 675 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 268 agggagctcgagaagaagttcagcggcaa 296 |||||||| ||||||||||| |||||||| Sbjct: 389 agggagctagagaagaagtttagcggcaa 361
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 153 cctctacatcaacgccgccttccag 177 |||||||||||| |||||||||||| Sbjct: 73564 cctctacatcaatgccgccttccag 73540
>dbj|AK112218.1| Ciona intestinalis cDNA, clone:ciad004i11, full insert sequence Length = 730 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 268 agggagctcgagaagaagttcagcggcaa 296 |||||||| ||||||||||| |||||||| Sbjct: 323 agggagctagagaagaagtttagcggcaa 351
>ref|XM_581800.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S7 (S8) (LOC505507), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 271 gagctcgagaagaagttcagcggcaaggacgt 302 ||||| ||||||||||||||||| ||| |||| Sbjct: 772 gagctggagaagaagttcagcgggaagcacgt 803
>ref|XM_425623.1| PREDICTED: Gallus gallus similar to Protocadherin 8 precursor (Arcadlin) (LOC428065), mRNA Length = 3297 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 agaagttcagcggcaaggac 300 |||||||||||||||||||| Sbjct: 2813 agaagttcagcggcaaggac 2832
>gb|AC145427.2| Rattus norvegicus chromosome 1 clone RP32-7K9 map q36, complete sequence Length = 154633 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 catgatggtcttttggagga 410 |||||||||||||||||||| Sbjct: 14418 catgatggtcttttggagga 14399
>emb|CR847946.7| Zebrafish DNA sequence from clone CH211-274N1 in linkage group 18, complete sequence Length = 149000 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 337 cccaaaaaaggttctgctgttgtt 360 |||||||||||||||||| ||||| Sbjct: 88081 cccaaaaaaggttctgcttttgtt 88104
>emb|BX036108.1|CNS0900W Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7DB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 519 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 tcaagagcgacgtcaaagac 153 |||||||||||||||||||| Sbjct: 341 tcaagagcgacgtcaaagac 360
>emb|BX036107.1|CNS0900V Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA7DB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 797 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 tcaagagcgacgtcaaagac 153 |||||||||||||||||||| Sbjct: 487 tcaagagcgacgtcaaagac 468
>emb|X85811.1|SCTRNAORF S.cerevisiae tRNA-Leu, and ORF's N2212, N2215, N2219, N2223, N2227, N2231 Length = 14261 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 agaactttgactgctgttca 392 |||||||||||||||||||| Sbjct: 1330 agaactttgactgctgttca 1311
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cagggagctcgagaagaagt 286 |||||||||||||||||||| Sbjct: 105743 cagggagctcgagaagaagt 105724 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cagggagctcgagaagaagt 286 |||||||||||||||||||| Sbjct: 66028 cagggagctcgagaagaagt 66009
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 agaactttgactgctgttca 392 |||||||||||||||||||| Sbjct: 215238 agaactttgactgctgttca 215257
>gb|DQ066326.1| Ixodes scapularis isolate IS-6-12L-109 40S ribosomal protein S7-like mRNA, partial cds Length = 594 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 gagctcgagaagaagttcagcggc 294 ||||| |||||||||||||||||| Sbjct: 277 gagctggagaagaagttcagcggc 300
>gb|AF543540.1| Oncorhynchus mykiss 40S ribosomal protein S7 mRNA, partial cds Length = 132 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 262 ctcgtcagggagctcgagaagaagttcagcgg 293 ||||| |||||||| || |||||||||||||| Sbjct: 7 ctcgtgagggagctggaaaagaagttcagcgg 38
>gb|AY086866.1| Arabidopsis thaliana clone 28739 mRNA, complete sequence Length = 841 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 311 ttgcaacaaggcggattgtgaggccacccaaaaaaggttc 350 |||| |||||| ||||||||||||| ||||| || ||||| Sbjct: 388 ttgctacaaggaggattgtgaggccgcccaagaagggttc 427
>ref|NM_208681.1| Eremothecium gossypii ACL076Wp (ACL076W), mRNA Length = 573 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 agaactttgactgctgttca 392 |||||||||||||||||||| Sbjct: 346 agaactttgactgctgttca 365
>emb|Z71372.1|SCYNL096C S.cerevisiae chromosome XIV reading frame ORF YNL096c Length = 2553 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 agaactttgactgctgttca 392 |||||||||||||||||||| Sbjct: 1267 agaactttgactgctgttca 1248
>gb|DQ333046.1| Synthetic construct Saccharomyces cerevisiae clone FLH005626.01X RPS7B gene, complete sequence Length = 918 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 agaactttgactgctgttca 392 |||||||||||||||||||| Sbjct: 691 agaactttgactgctgttca 710
>emb|CT032657.1| Platynereis dumerilii EST IB0AAA33DH04EM1 Length = 652 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gagaagaagttcagcggcaa 296 |||||||||||||||||||| Sbjct: 259 gagaagaagttcagcggcaa 278
>emb|CT032656.1| Platynereis dumerilii EST IB0AAA33DH04FM1 Length = 652 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gagaagaagttcagcggcaa 296 |||||||||||||||||||| Sbjct: 394 gagaagaagttcagcggcaa 375
>emb|CT032509.1| Platynereis dumerilii EST IB0AAA37AD11EM1 Length = 682 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gagaagaagttcagcggcaa 296 |||||||||||||||||||| Sbjct: 259 gagaagaagttcagcggcaa 278
>emb|CT032319.1| Platynereis dumerilii EST IB0AAA40DA08EM1 Length = 783 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gagaagaagttcagcggcaa 296 |||||||||||||||||||| Sbjct: 259 gagaagaagttcagcggcaa 278
>emb|CT032256.1| Platynereis dumerilii EST IB0AAA42AH05EM1 Length = 810 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 gagaagaagttcagcggcaa 296 |||||||||||||||||||| Sbjct: 293 gagaagaagttcagcggcaa 312
>emb|AM159218.1| Oncorhynchus mykiss mRNA for 40S ribosomal protein S7 (rps7 gene) Length = 718 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 262 ctcgtcagggagctcgagaagaagttcagcgg 293 ||||| |||||||| || |||||||||||||| Sbjct: 368 ctcgtgagggagctggaaaagaagttcagcgg 399
>gb|DQ115393.1| Saccharomyces cerevisiae Pol1p (POL1) gene, partial cds; and Avt4p (AVT4), Ynl100wp (YNL100W), Oca1p (OCA1), Ras2p (RAS2), Ynl097c-bp (YNL097C-B), Pho23p (PHO23), Rps7bp (RPS7B), Ynl095cp (YNL095C), App1p (APP1), Ypt53p (YPT53), Ynl092wp (YNL092W), Nst1p (NST1), Rho2p (RHO2), Ynl089cp (YNL089C), Top2p (TOP2), Tcb2p (TCB2), Ynl086wp (YNL086W), Mkt1p (MKT1), End3p (END3), Sal1p (SAL1), Pms1p (PMS1), Sws2p (SWS2), Ynl080cp (YNL080C), and Tpm1p (TPM1) genes, complete cds Length = 48787 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 agaactttgactgctgttca 392 |||||||||||||||||||| Sbjct: 13022 agaactttgactgctgttca 13003 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,564,803 Number of Sequences: 3902068 Number of extensions: 3564803 Number of successful extensions: 65827 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65529 Number of HSP's gapped (non-prelim): 281 length of query: 459 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 437 effective length of database: 17,147,199,772 effective search space: 7493326300364 effective search space used: 7493326300364 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
