ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal17e21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BEH3_ARATH (O49404) BES1/BZR1 homolog protein 3 37 0.036
2BEH4_ARATH (Q9ZV88) BES1/BZR1 homolog protein 4 33 0.40
3ROBO2_MOUSE (Q7TPD3) Roundabout homolog 2 precursor 29 7.5
4SLAF6_MOUSE (Q9ET39) SLAM family member 6 precursor (Lymphocyte ... 29 9.7

>BEH3_ARATH (O49404) BES1/BZR1 homolog protein 3|
          Length = 284

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +1

Query: 4   IHEECASDELELTLGSSRTR 63
           IH EC SD+LELTLG+SRTR
Sbjct: 265 IHGECVSDDLELTLGNSRTR 284



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>BEH4_ARATH (Q9ZV88) BES1/BZR1 homolog protein 4|
          Length = 325

 Score = 33.5 bits (75), Expect = 0.40
 Identities = 15/20 (75%), Positives = 17/20 (85%)
 Frame = +1

Query: 4   IHEECASDELELTLGSSRTR 63
           IHEE  SD+LELTLG+S TR
Sbjct: 306 IHEESGSDDLELTLGNSSTR 325



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>ROBO2_MOUSE (Q7TPD3) Roundabout homolog 2 precursor|
          Length = 1470

 Score = 29.3 bits (64), Expect = 7.5
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -3

Query: 230  AEDRRNDPSTPFSLSTNTELAEHQNDAPMQVSKGRPRR 117
            +  +R  P++PFS  +NT  A++Q+  P    K +  R
Sbjct: 1261 SSSQRQRPTSPFSTDSNTSAAQNQSQRPRPTKKHKGGR 1298



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>SLAF6_MOUSE (Q9ET39) SLAM family member 6 precursor (Lymphocyte antigen 108)|
          Length = 351

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 92  AATSVCLFFAWVFPLILALGRRSDVLQA 175
           A  S C    W+FPL+  LG  S+V Q+
Sbjct: 8   APDSACQRMVWLFPLVFCLGSGSEVSQS 35


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,913,134
Number of Sequences: 219361
Number of extensions: 1612750
Number of successful extensions: 4472
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4467
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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