>NPC2_ASPOR (O94183) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 175

 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
 Frame = +3

Query: 111 VEYCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLVI-DVKYWIFNVY 287
           +EYCN      + +  V++ P+P   G       S +  + I +G  V+ +VKY +  + 
Sbjct: 47  LEYCNDPSGDILDIKQVDLSPNPPLPGKTLAITASGTLREKIEDGAYVLLEVKYGLITLV 106

Query: 288 SETDDIC-----TKTDCP-ATSDFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCI 443
            +T D+C      +  CP    D  L+    LP   PPG YT+Q  +     E ++C+
Sbjct: 107 RQTADLCEQLVNVELKCPLGPGDMTLTKQVDLPKQIPPGKYTVQADVFNSDGEHITCL 164

>NPC2_ASPFU (Q4X136) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 175

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
 Frame = +3

Query: 117 YCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSE 293
           YC+      +++  V++VP+P   G   +   S +  + + EG  V ++VKY +  +  +
Sbjct: 49  YCSDPSGNILQIESVDLVPNPPLPGQTLSINASGNLKERVEEGAYVALEVKYGLITLIKQ 108

Query: 294 TDDICTKT-----DCPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCI 443
           T D+C +      +CP    +  L+    LPS  PPG Y +   +  K  ++++C+
Sbjct: 109 TADLCEQIKNVDLECPLEKGEMTLTKQVDLPSHIPPGKYNVHADVYTKDGKKITCL 164

>NPC2_CANAL (Q5A8A2) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 192

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
 Frame = +3

Query: 111 VEYCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVY 287
           +E C+  +   + +  V + P+P   G   TF    + DK I EG  V ++V+Y    + 
Sbjct: 66  IEVCDASEKQLLHLDEVIVTPNPPVAGQNLTFTAVGTLDKTIEEGAYVEVEVRYGFIKLI 125

Query: 288 SETDDIC---TKTD--CPATSDFE-LSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 446
            +T D+C    K D  CP  S  + ++ +  +P   PPG Y +  +   K DE ++C++
Sbjct: 126 HQTYDLCEEIVKVDLQCPIKSGKQTITKNVEIPEEVPPGKYLVVARAYTKDDEYITCLT 184

>NPC2_KLULA (Q6CNE0) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 173

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
 Frame = +3

Query: 120 CNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSET 296
           C+  ++  + V+ V +VP+P +RG   T   +      I EG  + I+V+     + S+T
Sbjct: 47  CDVDQSQSLDVTQVNLVPNPPQRGENLTIAAAGVLQTTIEEGAYIDIEVRLGYIKLISQT 106

Query: 297 DDICTKTD--------CPATSD-FELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 446
            D+C + +        CP     +EL+    +PS  PPG Y++  +     DE+++C++
Sbjct: 107 YDLCEQLEENDIDGLKCPIEEGVYELNKIVEIPSEVPPGKYSVIARAYNVDDEQITCLT 165

>NPC2_MAGGR (Q52FS9) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 178

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
 Frame = +3

Query: 129 HKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDI 305
           HK+  +K++ V++ P+P + G     K S    + I EG  + + VKY +  + +   D+
Sbjct: 49  HKDDILKITKVDLSPNPPKAGESLVIKASGDVTQKIEEGAYINLSVKYGLIRLINTKADL 108

Query: 306 CTKT-----DCPATSD-FELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 446
           C +      +CP      ++  S  LP+  PPG YT+   +  K ++++SC++
Sbjct: 109 CEQIKNVDLECPIDEGKLDIVKSVDLPNEIPPGKYTVFADVYTKDNKKISCLT 161

>NPC2_EMENI (Q5B0Q1) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 169

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
 Frame = +3

Query: 111 VEYCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGK-LVIDVKYWIFNVY 287
           +EYC++     ++++ V++ P+P + G     + + +  + I  G  +V++VKY +  + 
Sbjct: 45  LEYCSEPSGDILEINSVDLAPNPPKAGTTLKIRAAGNLHERIEAGAYVVLEVKYGLITLL 104

Query: 288 SETDDICTK-----TDCP-ATSDFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCI 443
            +T D+C +       CP       L+    LPS  P G YT+   +  K ++ ++C+
Sbjct: 105 RDTADLCAQLTNVDLQCPLEEGPMVLTKEVDLPSQIPRGRYTVHADVYTKDNKRITCL 162

>NPC2_ASHGO (Q756Q3) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 213

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
 Frame = +3

Query: 120 CNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSET 296
           C+  +++ + V  +EI P+P  RG   T +        + +G  V ++V+     + SET
Sbjct: 50  CDLDEDHLLDVQEIEITPNPPHRGKNLTVEARGDLFGPVEDGAYVTVEVRLGYIKLLSET 109

Query: 297 DDICTKTD-------CPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 446
            D+C + +       CP    ++ELS +  +P   PPG Y +  +     DE ++C++
Sbjct: 110 FDLCKELEENDLGLQCPLEEGEYELSKTVEIPQQVPPGRYHVVARAYTVDDEPITCLT 167

>NPC2_NEUCR (Q7RZ85) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 177

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
 Frame = +3

Query: 144 VKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC---- 308
           V +  V + P+P E G   T + S    + I EG  V + VKY    + + + D+C    
Sbjct: 54  VTIEEVILTPNPPEAGQTLTIEASGIVKEAIEEGAYVNLQVKYGYIRLINTSADLCKEMK 113

Query: 309 -TKTDCPATSD-FELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 446
             + +CP       ++ +  LP   PPG YT++  +    D+ ++C++
Sbjct: 114 NVELECPIKKGRLSITKNVELPKEIPPGKYTVEADVYNSDDKHITCLT 161

>NPC2_DEBHA (Q6BV42) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 196

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
 Frame = +3

Query: 144 VKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDIC---T 311
           + +  V I P+P  RG   TF       ++I +G  V +DV+Y    +  +T D+C   T
Sbjct: 81  LNLQSVVIDPNPPLRGENLTFVAKGVLSQDIEDGAYVEVDVRYGFIKLLHQTFDLCEEIT 140

Query: 312 KTD--CPATSDFELSHSQT-LPSITPPGSYTIQMKMLGKHDEELSCIS 446
           K D  CP +   ++   +  +P+  PPG Y +  +   K D  ++C+S
Sbjct: 141 KIDLECPISKGQQVIEKKVEIPAEVPPGKYIVSARAYTKDDIFITCLS 188

>NPC2_YARLI (Q6CHU5) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 189

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
 Frame = +3

Query: 111 VEYCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVY 287
           +  C+      +++  + I P+P  +G   T + S    +++ EG  + ++V+Y    + 
Sbjct: 62  ISLCDAEYEQLLEIKHLSIDPNPPAKGQNLTIEASGYLYEDVEEGAYIEVEVRYGYIRLI 121

Query: 288 SETDDICTKTD-----CPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCI 443
           S+T D+C +++     CP  + D +L+    LP+  PPG Y    +     D+ ++C+
Sbjct: 122 SQTLDLCEQSEQVDWSCPIKAGDLKLNKQIELPNEIPPGKYVAVARAYTVDDDLITCL 179

>NPC2_USTMA (Q4P580) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 193

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
 Frame = +3

Query: 144 VKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT- 317
           V V  + + PDP   G   T +   +    +++G    + VK  +  + +   D+C +  
Sbjct: 75  VNVESIVVSPDPPVPGQNLTVRAKGTVKDEVSDGTFADVIVKLGLIRLLARRFDVCEQAR 134

Query: 318 ------DCPATS-DFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCISFGFSIGF 467
                  CP ++ ++EL H+  LP   PPG + + +    +    L C+      GF
Sbjct: 135 ESNADLQCPLSAGEYELEHTVALPREIPPGKFNVHITGENQDGSNLLCLDLSIQFGF 191

>NPC2_CANGA (Q6FNB1) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 185

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
 Frame = +3

Query: 111 VEYCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVY 287
           ++ C+  +   ++++ +++VP+P +RG     K S    + I EG  V ++V+     + 
Sbjct: 53  LKMCDIAEGQLLEITKLDLVPNPPKRGSKLVIKASGEIFETIEEGAYVDVEVRLGYIKLL 112

Query: 288 SETDDICTKTD--------CPATSD--FELSHSQTLPSITPPGSYTIQMKMLGKHDEELS 437
           ++T D+C   +        CP        LS    +P   PPG Y +  +     D+ ++
Sbjct: 113 TQTYDLCEILEDNDVDGLTCPIKKGKYDNLSKDVDIPQEVPPGKYLVTARAYTNDDDLIT 172

Query: 438 CIS 446
           CI+
Sbjct: 173 CIT 175

>NPC2_SCHPO (Q9C0X9) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP)
          Length = 188

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 15/121 (12%)
 Frame = +3

Query: 144 VKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKT- 317
           V V  + ++P+P   G   T +   +    +  G  V I VKY    + +E  DIC K  
Sbjct: 63  VVVDYINLIPNPPAAGKNLTIETEINVGTTVLNGSYVDIQVKYGFVRIVNERLDICDKAY 122

Query: 318 -----DCPATSDFELSHSQ-TLPSITPPGSYTIQMKMLGKHDEELSCIS-------FGFS 458
                +CP         +  +LP   PPG Y +         E+L+C+S       FGF 
Sbjct: 123 ELAAVECPVEPGIITKQATISLPWAIPPGRYHVLATAYNADGEQLTCVSASVSFSHFGFQ 182

Query: 459 I 461
           +
Sbjct: 183 L 183

>NPC2_YEAST (Q12408) Phosphatidylglycerol/phosphatidylinositol transfer protein|
           precursor (PG/PI-TP) (NPC2 homolog)
          Length = 173

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
 Frame = +3

Query: 144 VKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLV-IDVKYWIFNVYSETDDICTKTD 320
           V++  V + P+P  RG   T   +    + I EG  + ++V+     + S+T D+C   +
Sbjct: 55  VEIKEVNLDPNPPVRGENLTISANGEVFETIEEGAYIDVEVRLGYIRLLSQTFDLCETLE 114

Query: 321 --------CPAT-SDFELSHSQTLPSITPPGSYTIQMKMLGKHDEELSCIS 446
                   CP    ++ +     +P   PPG Y +  +   + D+ ++C++
Sbjct: 115 DNDIEGLSCPIEPGEYNIKKIVEIPGEVPPGKYVVVARAYTEKDDLITCLT 165

>RPOA2_THEVO (Q979F5) DNA-directed RNA polymerase subunit A'' (EC 2.7.7.6)|
          Length = 508

 Score = 32.0 bits (71), Expect = 0.80
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 7/92 (7%)
 Frame = +3

Query: 180 VERGVPATFKISASTDKNITEGKLVIDVKYWIFNV-------YSETDDICTKTDCPATSD 338
           + + VPA + +     K ITEG +  D K + ++V       YS   D+  K      S 
Sbjct: 14  LSKSVPAKYAVDFEVPKGITEGYVTSDKKRFTYHVSISSVAPYSNESDVIQKKKSGLKSI 73

Query: 339 FELSHSQTLPSITPPGSYTIQMKMLGKHDEEL 434
            E+   Q +  I+      ++ +  GK  +EL
Sbjct: 74  MEIEKIQKIEPIS-----IMEFRSSGKRIDEL 100

>SSS_SALOF (O81193) (+)-sabinene synthase, chloroplast precursor (EC 4.2.3.11)|
           (SSS)
          Length = 590

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +3

Query: 180 VERG-VPATFKISASTDKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSD 338
           +ERG VP   +   + D N +E + V  VK+ I   + E + + T +DCP T D
Sbjct: 496 LERGDVPKAIQCYMN-DTNASEREAVEHVKFLIREAWKEMNTVTTASDCPFTDD 548

>PGMP_BRANA (Q9SMM0) Phosphoglucomutase, chloroplast precursor (EC 5.4.2.2)|
           (Glucose phosphomutase) (PGM)
          Length = 629

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +3

Query: 141 PVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLVIDVKY 269
           P+ V  +E  PD +  GVP         D N+T  K ++DV Y
Sbjct: 298 PIFVDNLEAKPDSISNGVPLEDFGHGHPDPNLTYAKDLVDVMY 340

>RPOB_LEPBI (Q9KK59) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1228

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
 Frame = +3

Query: 153  SGVEIVPDPVERGVPATFKISA--STDKNITEGKLVIDVKYWIFNVYSETD--DICTKTD 320
            S V+IV +P+  GVP+   +     T       KL I+ +  +F+  SE D  D C K  
Sbjct: 1003 SPVDIVLNPL--GVPSRMNLGQIFETQLGFAAKKLGINFETPVFDGASEGDVNDFCKKAG 1060

Query: 321  CPATSDFELSHSQT 362
             P  S F+L   +T
Sbjct: 1061 LPENSKFQLYDGRT 1074

>PLSC_PHYPO (P19203) Plasmin C precursor|
          Length = 150

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 285 YSETDDICTKTDCPATSDFELSHSQTLPSITPPGSYTIQMKMLGKHD 425
           Y++T   CT   C   +D++LS  QT  S  P    T+++     HD
Sbjct: 39  YTQTAS-CTPIPCTKNTDYQLSILQTCVSAIPQTKGTLEISSYPSHD 84

>TDRD7_MOUSE (Q8K1H1) Tudor domain-containing protein 7 (Tudor repeat associator|
           with PCTAIRE 2) (Trap)
          Length = 1086

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 321 CPATSDFELSHSQTLPSITPPGSYTIQMKMLGKHDEEL 434
           CP   +  L+ +   P+ITPP SYT +M  +    +E+
Sbjct: 196 CPTEVNDNLNQTVEKPNITPPASYTNKMDEVQNRIKEI 233

>OSBP1_HUMAN (P22059) Oxysterol-binding protein 1|
          Length = 807

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 26/88 (29%), Positives = 36/88 (40%)
 Frame = +3

Query: 201 TFKISASTDKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSDFELSHSQTLPSITP 380
           T+K   +T  NI  GKL ID    I  V  +T D C     P +        +    +T 
Sbjct: 574 TWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTD 633

Query: 381 PGSYTIQMKMLGKHDEELSCISFGFSIG 464
           P S  +   +LG  DE++ C      IG
Sbjct: 634 P-SGKVHFALLGTWDEKMECFKVQPVIG 660

>OSBP1_RABIT (P16258) Oxysterol-binding protein 1|
          Length = 809

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 24/80 (30%), Positives = 34/80 (42%)
 Frame = +3

Query: 201 TFKISASTDKNITEGKLVIDVKYWIFNVYSETDDICTKTDCPATSDFELSHSQTLPSITP 380
           T+K   +T  NI  GKL ID    I  V  +T D C     P +        +    +T 
Sbjct: 576 TWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTD 635

Query: 381 PGSYTIQMKMLGKHDEELSC 440
           P S  +   +LG  DE++ C
Sbjct: 636 P-SGKVHFALLGTWDEKMDC 654

>SYE_SULAC (Q4J8P2) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 567

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 16/64 (25%), Positives = 34/64 (53%)
 Frame = +3

Query: 111 VEYCNKHKNYPVKVSGVEIVPDPVERGVPATFKISASTDKNITEGKLVIDVKYWIFNVYS 290
           +++  K ++ PV V    + PDP E+G+     +  S  +N+ +G++V  ++Y    V  
Sbjct: 499 IQWVKKDESVPVVV----LSPDP-EKGIETINGVGESEIRNLNKGEIVQFIRYGFVKVDE 553

Query: 291 ETDD 302
           ++ D
Sbjct: 554 KSAD 557


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,337,379
Number of Sequences: 219361
Number of extensions: 979496
Number of successful extensions: 3135
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3122
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)