ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal16p01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
2dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
3dbj|AB047475.1| Glycine max gmMGD A mRNA for MGDG synthase type ... 145 1e-31
4gb|U62622.1|CSU62622 Cucumis sativus monogalactosyldiacylglycero... 105 1e-19
5dbj|AB047476.1| Nicotiana tabacum ntMGD A mRNA for MGDG synthase... 98 3e-17
6ref|NM_119327.2| Arabidopsis thaliana MGD1 (MONOGALACTOSYLDIACYL... 82 2e-12
7ref|NM_179151.1| Arabidopsis thaliana MGD1 (MONOGALACTOSYLDIACYL... 82 2e-12
8gb|BT008890.1| Arabidopsis thaliana At4g31780 mRNA, complete cds 82 2e-12
9emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, ... 82 2e-12
10emb|AL049607.1|ATF11C18 Arabidopsis thaliana DNA chromosome 4, B... 82 2e-12
11emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, B... 82 2e-12
12gb|AY092965.1| Arabidopsis thaliana strong similarity to monogal... 82 2e-12
13gb|AF241797.1|AF241797 Arabidopsis thaliana monogalactosyldiacyl... 82 2e-12
14emb|AJ249607.1|SOL249607 Spinacia oleracea mRNA for MGDG synthas... 82 2e-12
15dbj|AB047399.1| Arabidopsis thaliana mgdA mRNA for MGDG synthase... 82 2e-12
16ref|XM_481404.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
17gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
18dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
19dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
20dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
21dbj|AK064148.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
23dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic D... 70 7e-09
24emb|CR381684.9| Zebrafish DNA sequence from clone CH211-28P3 in ... 42 1.6
25ref|NM_122048.2| Arabidopsis thaliana MGD2; 1,2-diacylglycerol 3... 40 6.2
26gb|AY078038.1| Arabidopsis thaliana AT5g20410/F5O24_300 mRNA, co... 40 6.2
27gb|AC025656.7| Homo sapiens chromosome 18, clone RP11-36L19, com... 40 6.2
28gb|AF372926.1|AF372926 Arabidopsis thaliana AT5g20410/F5O24_300 ... 40 6.2
29emb|BX829667.1|CNS0A000 Arabidopsis thaliana Full-length cDNA Co... 40 6.2
30gb|AC105053.3| Homo sapiens BAC clone RP11-688J22 from 2, comple... 40 6.2
31gb|AC129910.4| Branchiostoma floridae, clone -37E14, complete se... 40 6.2
32gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8 40 6.2
33gb|AC006221.1|AC006221 Homo sapiens chromosome 18, clone hRPK.14... 40 6.2
34emb|AL928538.5| Mouse DNA sequence from clone RP23-102P12 on chr... 40 6.2
35emb|AJ000331.1|ATMGDGSYN Arabidopsis thaliana mRNA for monogalac... 40 6.2 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  234 bits (118), Expect = 2e-58
 Identities = 157/170 (92%)
 Strand = Plus / Minus

                                                                            
Query: 104      caggtattcgtcactgatttgtggactgaacatacaccatggcctttcaaccaacttccc 163
                |||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||| |||
Sbjct: 15298323 caggtattcgtcactgatttatggactgaccataccccatggccattcaaccaactaccc 15298264

                                                                            
Query: 164      agaagctatagtttcttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
                || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 15298263 aggagctacagtttcttggtgaaacatggacccttgtggaagatgacatactatggtact 15298204

                                                                  
Query: 224      gcgccacgagtaattcaccagccacattttgctgcaacagcaacattcat 273
                || ||||||||| |||| ||||||||||||||||||||| | ||||||||
Sbjct: 15298203 gcaccacgagtagttcatcagccacattttgctgcaacatcgacattcat 15298154



 Score =  163 bits (82), Expect = 6e-37
 Identities = 145/166 (87%)
 Strand = Plus / Minus

                                                                            
Query: 278      agagaggttgccaaaggtctgatgaagtaccaaccagatgtgattatcagtgtacatcct 337
                ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 15296841 agagaggttgcaaaaggtctcatgaaataccaaccagatgtaattatcagtgtccatcct 15296782

                                                                            
Query: 338      ttaatgcaacatgtcccccttcgagttctacggtccagaggtttattggataagattccg 397
                |||||||| |||||||| || ||| | ||| |||| | ||||||| ||||||||||||||
Sbjct: 15296781 ttaatgcagcatgtcccactccgaatcctaaggtcaaaaggtttactggataagattccg 15296722

                                                              
Query: 398      ttcacaactgttatcaccgacttgagcacttgtcacccaacttggt 443
                |||||||| ||| |||| ||  |||| |||||||||||||| ||||
Sbjct: 15296721 ttcacaacagttgtcacagatctgagtacttgtcacccaacatggt 15296676



 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Minus

                                                                            
Query: 5        aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 64
                ||||||||||||||||| ||||| |||||||||||||| || ||||| ||||||||||||
Sbjct: 15300453 aagaaggtgctgatcctgatgagcgacacgggcggcgggcaccgcgcttccgccgaggcc 15300394

                                                            
Query: 65       attaaggccgcttttgcccaggagtatggcgacgactaccaggt 108
                || ||||| || ||   ||||||||  |||||||||||||||||
Sbjct: 15300393 atcaaggcggcgttcatccaggagttcggcgacgactaccaggt 15300350
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>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0418B08
          Length = 165909

 Score =  234 bits (118), Expect = 2e-58
 Identities = 157/170 (92%)
 Strand = Plus / Minus

                                                                         
Query: 104   caggtattcgtcactgatttgtggactgaacatacaccatggcctttcaaccaacttccc 163
             |||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||| |||
Sbjct: 77512 caggtattcgtcactgatttatggactgaccataccccatggccattcaaccaactaccc 77453

                                                                         
Query: 164   agaagctatagtttcttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
             || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 77452 aggagctacagtttcttggtgaaacatggacccttgtggaagatgacatactatggtact 77393

                                                               
Query: 224   gcgccacgagtaattcaccagccacattttgctgcaacagcaacattcat 273
             || ||||||||| |||| ||||||||||||||||||||| | ||||||||
Sbjct: 77392 gcaccacgagtagttcatcagccacattttgctgcaacatcgacattcat 77343



 Score =  163 bits (82), Expect = 6e-37
 Identities = 145/166 (87%)
 Strand = Plus / Minus

                                                                         
Query: 278   agagaggttgccaaaggtctgatgaagtaccaaccagatgtgattatcagtgtacatcct 337
             ||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 76030 agagaggttgcaaaaggtctcatgaaataccaaccagatgtaattatcagtgtccatcct 75971

                                                                         
Query: 338   ttaatgcaacatgtcccccttcgagttctacggtccagaggtttattggataagattccg 397
             |||||||| |||||||| || ||| | ||| |||| | ||||||| ||||||||||||||
Sbjct: 75970 ttaatgcagcatgtcccactccgaatcctaaggtcaaaaggtttactggataagattccg 75911

                                                           
Query: 398   ttcacaactgttatcaccgacttgagcacttgtcacccaacttggt 443
             |||||||| ||| |||| ||  |||| |||||||||||||| ||||
Sbjct: 75910 ttcacaacagttgtcacagatctgagtacttgtcacccaacatggt 75865



 Score =  103 bits (52), Expect = 5e-19
 Identities = 91/104 (87%)
 Strand = Plus / Minus

                                                                         
Query: 5     aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 64
             ||||||||||||||||| ||||| |||||||||||||| || ||||| ||||||||||||
Sbjct: 79642 aagaaggtgctgatcctgatgagcgacacgggcggcgggcaccgcgcttccgccgaggcc 79583

                                                         
Query: 65    attaaggccgcttttgcccaggagtatggcgacgactaccaggt 108
             || ||||| || ||   ||||||||  |||||||||||||||||
Sbjct: 79582 atcaaggcggcgttcatccaggagttcggcgacgactaccaggt 79539
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>dbj|AB047475.1| Glycine max gmMGD A mRNA for MGDG synthase type A, complete cds
          Length = 1985

 Score =  145 bits (73), Expect = 1e-31
 Identities = 193/233 (82%)
 Strand = Plus / Plus

                                                                       
Query: 104 caggtattcgtcactgatttgtggactgaacatacaccatggcctttcaaccaacttccc 163
           ||||| ||||| |||||||||||| |||| || || || ||||| |||||||||||||||
Sbjct: 668 caggttttcgttactgatttgtgggctgatcacacgccttggccattcaaccaacttccc 727

                                                                       
Query: 164 agaagctatagtttcttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
           || |||||||||||  ||||||||||||| || |||||||||||||| |||||||| || 
Sbjct: 728 aggagctatagttttctggtgaaacatgggccgttgtggaagatgacctactatggaact 787

                                                                       
Query: 224 gcgccacgagtaattcaccagccacattttgctgcaacagcaacattcatcgcgagagag 283
           || ||||| ||| | || ||| |  ||||||||||||| | ||| ||||| ||  | |||
Sbjct: 788 gccccacgtgtagtgcatcagtctaattttgctgcaactggaactttcatagctcgcgag 847

                                                                
Query: 284 gttgccaaaggtctgatgaagtaccaaccagatgtgattatcagtgtacatcc 336
           ||||||||||| || ||||| || || |||||| | || |||||||| |||||
Sbjct: 848 gttgccaaaggcctaatgaaatatcagccagatataataatcagtgtgcatcc 900
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>gb|U62622.1|CSU62622 Cucumis sativus monogalactosyldiacylglycerol synthase mRNA, complete
            cds
          Length = 2142

 Score =  105 bits (53), Expect = 1e-19
 Identities = 197/245 (80%)
 Strand = Plus / Plus

                                                                        
Query: 116  actgatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagt 175
            |||||||||||||| || || || || ||||||||||| ||| | || |||||||| |  
Sbjct: 833  actgatttgtggacggaccacactccttggcctttcaatcaattaccaagaagctacaac 892

                                                                        
Query: 176  ttcttggtgaaacatggacccttgtggaagatgacatactatggtacagcgccacgagta 235
            |||||||||||||||||  | |||||||||||||| |||||||  || || |||  ||| 
Sbjct: 893  ttcttggtgaaacatggcacattgtggaagatgacttactatgtgactgctccaaaagtg 952

                                                                        
Query: 236  attcaccagccacattttgctgcaacagcaacattcatcgcgagagaggttgccaaaggt 295
            ||||| ||| || |||||||||||||  |||||||||| ||  |||| || || ||||| 
Sbjct: 953  attcatcagtcaaattttgctgcaacttcaacattcatagctcgagaagtagcaaaagga 1012

                                                                        
Query: 296  ctgatgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtcccc 355
            |||||||| ||    |||||| | ||||||||||| |||||| | ||||| ||||| |||
Sbjct: 1013 ctgatgaaatataggccagatattattatcagtgttcatcctctgatgcagcatgttccc 1072

                 
Query: 356  cttcg 360
             ||||
Sbjct: 1073 attcg 1077



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 419  ttgagcacttgtcacccaacttggtttcacaagcttgt 456
            |||||||| || |||||||| |||||||||||||||||
Sbjct: 1136 ttgagcacctgccacccaacatggtttcacaagcttgt 1173
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>dbj|AB047476.1| Nicotiana tabacum ntMGD A mRNA for MGDG synthase type A, complete
           cds
          Length = 2055

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 196/245 (80%)
 Strand = Plus / Plus

                                                                       
Query: 116 actgatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagt 175
           |||||||||||||| |||||||||||||||||||| |||||||| ||  | || || |  
Sbjct: 713 actgatttgtggacagaacatacaccatggccttttaaccaactaccacggagttacaac 772

                                                                       
Query: 176 ttcttggtgaaacatggacccttgtggaagatgacatactatggtacagcgccacgagta 235
           ||||| |||||||||||  |  ||||||  |||||||| |||| ||| || || ||  ||
Sbjct: 773 ttcttagtgaaacatggctctctgtggagaatgacatattatgctactgctcctcgttta 832

                                                                       
Query: 236 attcaccagccacattttgctgcaacagcaacattcatcgcgagagaggttgccaaaggt 295
            |||| ||| |  |||||||||| ||| | || || || ||  | |||||||||||||||
Sbjct: 833 gttcatcagaccaattttgctgctacatctacttttattgctcgcgaggttgccaaaggt 892

                                                                       
Query: 296 ctgatgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtcccc 355
            | ||||| || ||||| ||| | |||||||||||||||||| ||||||| ||||| || 
Sbjct: 893 ttaatgaaatatcaacctgatattattatcagtgtacatcctctaatgcagcatgtacct 952

                
Query: 356 cttcg 360
           |||||
Sbjct: 953 cttcg 957



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 401  acaactgttatcaccgacttgagcacttgtcacccaacttggtttcacaa 450
            ||||||||||| || || || ||||||||||| || || |||||||||||
Sbjct: 998  acaactgttataacagatttaagcacttgtcatcctacatggtttcacaa 1047
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>ref|NM_119327.2| Arabidopsis thaliana MGD1 (MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE
           1); 1,2-diacylglycerol 3-beta-galactosyltransferase
           AT4G31780 (MGD1) transcript variant AT4G31780.2 mRNA,
           complete cds
          Length = 1998

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Plus

                                                                       
Query: 119 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 178
           ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| 
Sbjct: 761 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 820

                                                        
Query: 179 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
            |||||||||||||| |  ||||||| ||||| || |||||||||
Sbjct: 821 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 865



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                        
Query: 299  atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 358
            ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| |||
Sbjct: 941  atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 1000

              
Query: 359  cg 360
            ||
Sbjct: 1001 cg 1002
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>ref|NM_179151.1| Arabidopsis thaliana MGD1 (MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE
           1); 1,2-diacylglycerol 3-beta-galactosyltransferase/
           transferase, transferring glyc> AT4G31780 (MGD1)
           transcript variant AT4G31780.1 mRNA, complete cds
          Length = 1999

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Plus

                                                                       
Query: 119 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 178
           ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| 
Sbjct: 761 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 820

                                                        
Query: 179 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
            |||||||||||||| |  ||||||| ||||| || |||||||||
Sbjct: 821 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 865



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                        
Query: 299  atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 358
            ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| |||
Sbjct: 941  atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 1000

              
Query: 359  cg 360
            ||
Sbjct: 1001 cg 1002
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>gb|BT008890.1| Arabidopsis thaliana At4g31780 mRNA, complete cds
          Length = 1602

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Plus

                                                                       
Query: 119 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 178
           ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| 
Sbjct: 538 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 597

                                                        
Query: 179 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
            |||||||||||||| |  ||||||| ||||| || |||||||||
Sbjct: 598 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 642



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 299 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 358
           ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| |||
Sbjct: 718 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 777

             
Query: 359 cg 360
           ||
Sbjct: 778 cg 779
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>emb|AL161579.2|ATCHRIV75 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 75
          Length = 196242

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Plus

                                                                          
Query: 119    gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 178
              ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| 
Sbjct: 141152 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 141211

                                                           
Query: 179    ttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
               |||||||||||||| |  ||||||| ||||| || |||||||||
Sbjct: 141212 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 141256



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                          
Query: 299    atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 358
              ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| |||
Sbjct: 141549 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 141608

                
Query: 359    cg 360
              ||
Sbjct: 141609 cg 141610
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>emb|AL049607.1|ATF11C18 Arabidopsis thaliana DNA chromosome 4, BAC clone F11C18 (ESSA
            project)
          Length = 111517

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Plus

                                                                        
Query: 119  gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 178
            ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| 
Sbjct: 1814 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 1873

                                                         
Query: 179  ttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
             |||||||||||||| |  ||||||| ||||| || |||||||||
Sbjct: 1874 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 1918



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                        
Query: 299  atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 358
            ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| |||
Sbjct: 2211 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 2270

              
Query: 359  cg 360
            ||
Sbjct: 2271 cg 2272
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>emb|AL031004.1|ATF28M20 Arabidopsis thaliana DNA chromosome 4, BAC clone F28M20 (ESSAII
             project)
          Length = 90902

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                         
Query: 119   gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 178
             ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| 
Sbjct: 12119 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 12060

                                                          
Query: 179   ttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
              |||||||||||||| |  ||||||| ||||| || |||||||||
Sbjct: 12059 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 12015



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                         
Query: 299   atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 358
             ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| |||
Sbjct: 11722 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 11663

               
Query: 359   cg 360
             ||
Sbjct: 11662 cg 11661
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>gb|AY092965.1| Arabidopsis thaliana strong similarity to
           monogalactosyldiacylglycerol synthase, Cucumis sativus,
           PID:g1805254 (At4g31780) mRNA, complete cds
          Length = 2116

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Plus

                                                                       
Query: 119 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 178
           ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| 
Sbjct: 838 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 897

                                                        
Query: 179 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
            |||||||||||||| |  ||||||| ||||| || |||||||||
Sbjct: 898 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 942



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                        
Query: 299  atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 358
            ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| |||
Sbjct: 1018 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 1077

              
Query: 359  cg 360
            ||
Sbjct: 1078 cg 1079
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>gb|AF241797.1|AF241797 Arabidopsis thaliana monogalactosyldiacylglycerol synthase (MGD1)
           mRNA, complete cds
          Length = 1929

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Plus

                                                                       
Query: 119 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 178
           ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| 
Sbjct: 697 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 756

                                                        
Query: 179 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
            |||||||||||||| |  ||||||| ||||| || |||||||||
Sbjct: 757 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 801



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 299 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 358
           ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| |||
Sbjct: 877 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 936

             
Query: 359 cg 360
           ||
Sbjct: 937 cg 938
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>emb|AJ249607.1|SOL249607 Spinacia oleracea mRNA for MGDG synthase A (mgd A gene)
          Length = 1569

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 203/257 (78%)
 Strand = Plus / Plus

                                                                       
Query: 104 caggtattcgtcactgatttgtggactgaacatacaccatggcctttcaaccaacttccc 163
           ||||||||||| |||||||| ||| |||| ||||| || ||||| || || ||| | || 
Sbjct: 490 caggtattcgttactgatttatggtctgagcatactccttggccatttaatcaattacca 549

                                                                       
Query: 164 agaagctatagtttcttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
           || |||||||  ||||||||||||||||| ||  ||||||| ||||  || |||||||||
Sbjct: 550 aggagctataacttcttggtgaaacatggccctctgtggaaaatgatgtattatggtaca 609

                                                                       
Query: 224 gcgccacgagtaattcaccagccacattttgctgcaacagcaacattcatcgcgagagag 283
            | || || ||||| || ||  || |||||||||| ||  |   |||||| ||  |||||
Sbjct: 610 tctcctcgtgtaatccatcaatcaaattttgctgcgacctctgtattcatagcacgagag 669

                                                                       
Query: 284 gttgccaaaggtctgatgaagtaccaaccagatgtgattatcagtgtacatcctttaatg 343
           || |||| |||  ||||||| ||||| |||||| | || |||||||| |||||| | |||
Sbjct: 670 gtggccagagggttgatgaaataccagccagatattatcatcagtgtgcatcctctgatg 729

                            
Query: 344 caacatgtcccccttcg 360
           |||||||| || |||||
Sbjct: 730 caacatgttccacttcg 746
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>dbj|AB047399.1| Arabidopsis thaliana mgdA mRNA for MGDG synthase type A, complete
           cds
          Length = 1775

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 89/105 (84%)
 Strand = Plus / Plus

                                                                       
Query: 119 gatttgtggactgaacatacaccatggcctttcaaccaacttcccagaagctatagtttc 178
           ||||||||||| || ||||| || ||||| |||||||| |||||||| ||||||| ||| 
Sbjct: 642 gatttgtggacagatcatacgccctggccgttcaaccagcttcccaggagctataatttt 701

                                                        
Query: 179 ttggtgaaacatggacccttgtggaagatgacatactatggtaca 223
            |||||||||||||| |  ||||||| ||||| || |||||||||
Sbjct: 702 ctggtgaaacatggaactctgtggaaaatgacttattatggtaca 746



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 299 atgaagtaccaaccagatgtgattatcagtgtacatcctttaatgcaacatgtccccctt 358
           ||||| || ||||||||| | || |||||||| ||||| || |||||||||||||| |||
Sbjct: 822 atgaaatatcaaccagatatcataatcagtgttcatccgttgatgcaacatgtcccactt 881

             
Query: 359 cg 360
           ||
Sbjct: 882 cg 883
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>ref|XM_481404.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1410

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                       
Query: 5   aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 64
           ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 208 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 267
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>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
              complete sequence
          Length = 158749

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                          
Query: 5      aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 64
              ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 134958 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 134899
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                            
Query: 5        aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 64
                ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 12258873 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 12258932
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>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0063H21
          Length = 188058

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                          
Query: 5      aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 64
              ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 132365 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 132424
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>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0045D08
          Length = 160541

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                         
Query: 5     aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 64
             ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 17522 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 17581
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>dbj|AK064148.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-C09,
          full insert sequence
          Length = 1345

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Plus

                                                                      
Query: 5  aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggcc 64
          ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||
Sbjct: 25 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcatccgccgaggcc 84
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                           
Query: 5        aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggc 63
                ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| |||||||||||
Sbjct: 34242116 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcctccgccgaggc 34242174
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>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0689B12
          Length = 154745

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                        
Query: 5     aagaaggtgctgatcctcatgagtgacacgggcggcggccatcgcgcgtccgccgaggc 63
             ||||| ||||| ||||||||||| ||||| ||||||||||| ||||| |||||||||||
Sbjct: 77389 aagaacgtgctcatcctcatgagcgacaccggcggcggccaccgcgcctccgccgaggc 77447
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>emb|CR381684.9| Zebrafish DNA sequence from clone CH211-28P3 in linkage group 23,
              complete sequence
          Length = 184232

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 318    tgattatcagtgtacatcctttaat 342
              ||||| |||||||||||||||||||
Sbjct: 114541 tgattgtcagtgtacatcctttaat 114517
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>ref|NM_122048.2| Arabidopsis thaliana MGD2; 1,2-diacylglycerol
           3-beta-galactosyltransferase/ transferase, transferring
           glycosyl groups AT5G20410 (MGD2) mRNA, complete cds
          Length = 1697

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 326 agtgtacatcctttaatgcaacat 349
           ||||| ||||||||||||||||||
Sbjct: 614 agtgttcatcctttaatgcaacat 637
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>gb|AY078038.1| Arabidopsis thaliana AT5g20410/F5O24_300 mRNA, complete cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 326 agtgtacatcctttaatgcaacat 349
           ||||| ||||||||||||||||||
Sbjct: 304 agtgttcatcctttaatgcaacat 327
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>gb|AC025656.7| Homo sapiens chromosome 18, clone RP11-36L19, complete sequence
          Length = 193351

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   aattcaccagccacattttg 254
             ||||||||||||||||||||
Sbjct: 72727 aattcaccagccacattttg 72746
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>gb|AF372926.1|AF372926 Arabidopsis thaliana AT5g20410/F5O24_300 mRNA, complete cds
          Length = 1585

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 326 agtgtacatcctttaatgcaacat 349
           ||||| ||||||||||||||||||
Sbjct: 502 agtgttcatcctttaatgcaacat 525
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>emb|BX829667.1|CNS0A000 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB28ZF08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1604

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 326 agtgtacatcctttaatgcaacat 349
           ||||| ||||||||||||||||||
Sbjct: 601 agtgttcatcctttaatgcaacat 624
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>gb|AC105053.3| Homo sapiens BAC clone RP11-688J22 from 2, complete sequence
          Length = 108768

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   tgatttgtggactgaacata 137
             ||||||||||||||||||||
Sbjct: 24369 tgatttgtggactgaacata 24350
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>gb|AC129910.4| Branchiostoma floridae, clone -37E14, complete sequence
          Length = 80763

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tgcaacagcaacattcatcg 275
             ||||||||||||||||||||
Sbjct: 37496 tgcaacagcaacattcatcg 37515
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>gb|AF296833.1|F7C8 Arabidopsis thaliana BAC F7C8
          Length = 70169

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 326 agtgtacatcctttaatgcaacat 349
           ||||| ||||||||||||||||||
Sbjct: 326 agtgttcatcctttaatgcaacat 349
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>gb|AC006221.1|AC006221 Homo sapiens chromosome 18, clone hRPK.142_O_10, complete sequence
          Length = 79085

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   aattcaccagccacattttg 254
             ||||||||||||||||||||
Sbjct: 45485 aattcaccagccacattttg 45504
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>emb|AL928538.5| Mouse DNA sequence from clone RP23-102P12 on chromosome X, complete
             sequence
          Length = 140604

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   ttggtgaaacatggaccctt 198
             ||||||||||||||||||||
Sbjct: 37476 ttggtgaaacatggaccctt 37495
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>emb|AJ000331.1|ATMGDGSYN Arabidopsis thaliana mRNA for monogalactosyldiacylglycerol synthase
          Length = 1648

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 326 agtgtacatcctttaatgcaacat 349
           ||||| ||||||||||||||||||
Sbjct: 614 agtgttcatcctttaatgcaacat 637


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,367,641
Number of Sequences: 3902068
Number of extensions: 3367641
Number of successful extensions: 56231
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56113
Number of HSP's gapped (non-prelim): 117
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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