>CEMA_ANTFO (Q85AP4) Chloroplast envelope membrane protein|
          Length = 508

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
 Frame = +1

Query: 7   LKTIASCNVEAGVVKTWINFLEDTWQLQSSYDEQIEQKTNDE---------LERCTSNFM 159
           L  I S +++   ++ WI F  DT+Q Q S +   E++ ++          L++  SNF+
Sbjct: 297 LPWIISRSLKEWFLEPWIKFWWDTYQSQISLNSFQEERASEGLQEVEEPLWLDKLVSNFL 356

Query: 160 KLTKYHLSTFKEVLSPSIERIHTYVDN 240
           K     L+   E+   +I+ I  Y +N
Sbjct: 357 KNQSQDLNI--EIYGETIQLIRMYNEN 381

>SGF29_YEAST (P25554) SAGA-associated factor 29 (29 kDa SAGA-associated factor)|
           (SAGA histone acetyltransferase complex 29 kDa subunit)
          Length = 259

 Score = 31.2 bits (69), Expect = 0.68
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = +1

Query: 85  LQSSYDEQIEQKTNDELERCTSNFMKLTK----YHLSTFKEVLSPSIERIHTYVDNL 243
           LQ  Y+       +DEL+    NF+ ++K     HL+TF+E +  ++ R+H  +DN+
Sbjct: 12  LQDIYNANEVIPFDDELQTKKLNFLNMSKDQLQLHLNTFQEHME-NVNRVHRILDNV 67

>YL31_SCHPO (Q10222) Hypothetical protein C1071.01c in chromosome I|
          Length = 670

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 103 EQIEQKTNDELE-RCTSNFMKLTKYHLSTFKEVLSPSIERIHTYV 234
           ++IE     +L  RC    +KL   HL+      S S+E+IH Y+
Sbjct: 246 DEIELSNESKLAIRCIEKNLKLILLHLAKSTGASSSSVEKIHAYL 290

>SNX41_CANAL (Q5AD73) Sorting nexin-41|
          Length = 681

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
 Frame = +1

Query: 118 KTNDELERCTSNFMKLTKYHLSTFKEVLSPSIER-----IHTYVDN 240
           K N  +E C  +  KLT+  ++TF+E LS  IER     + TY+ N
Sbjct: 610 KLNQLIELCNQDMHKLTEALVNTFEEFLS-KIERKWLQLMITYIQN 654

>YQY1_CAEEL (Q09560) Hypothetical protein F36G3.1|
          Length = 964

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
 Frame = +1

Query: 67  LEDTWQLQSSYDEQIEQKTNDELERCTS-----------NFMKLTKYHLSTFKEVLSPSI 213
           +EDT + + +Y E+ E++T  ++E  TS           + ++LT   +S   E     I
Sbjct: 162 IEDTREFEETYSEEDERQTPIQMENATSEVSSSEDEISDSVVELTNDMMSKITE-----I 216

Query: 214 ERIHTYVDNLAF 249
           E IH  V + +F
Sbjct: 217 EEIHAQVHSESF 228

>UBL4A_MOUSE (P21126) Ubiquitin-like protein 4A (Ubiquitin-like protein GDX)|
          Length = 157

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 82  QLQSSYDEQIEQKTNDELERCTSNFM 159
           QLQ  YD  + + T D++ER  S F+
Sbjct: 118 QLQRDYDRSLSRLTLDDIERLASRFL 143

>CF150_HUMAN (Q8N884) Protein C6orf150|
          Length = 522

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
 Frame = +1

Query: 64  FLEDTWQLQSSYDEQI------EQKT---NDELERCTSNFMKLTKYHLSTFKE 195
           F E+TW+L  S+ E+       + KT   N E + C  + +KL KY L   KE
Sbjct: 370 FQEETWRLSFSHIEKEILNNHGKSKTCCENKEEKCCRKDCLKLMKYLLEQLKE 422

>DPOL_PBCV1 (P30321) DNA polymerase (EC 2.7.7.7)|
          Length = 913

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 10/88 (11%)
 Frame = +1

Query: 16  IASCNVEAGVVKTWINFLED----------TWQLQSSYDEQIEQKTNDELERCTSNFMKL 165
           I SC  E+ V+ TW+  L+D          TWQ    Y        +   + C  +    
Sbjct: 243 IISCLEESDVMNTWMKILQDEKTDVSIGYNTWQYDLRY-------VHGRTQMCVDDMTGE 295

Query: 166 TKYHLSTFKEVLSPSIERIHTYVDNLAF 249
            K  LS    +LS   E +   + + AF
Sbjct: 296 DKVKLSNLGRLLSGGGEVVERDLSSNAF 323

>DYH5_MOUSE (Q8VHE6) Ciliary dynein heavy chain 5 (Axonemal beta dynein heavy|
            chain 5) (Mdnah5)
          Length = 4621

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 15/64 (23%), Positives = 31/64 (48%)
 Frame = +1

Query: 40   GVVKTWINFLEDTWQLQSSYDEQIEQKTNDELERCTSNFMKLTKYHLSTFKEVLSPSIER 219
            G+   W    E+  +  + +D++I QKTN       +  +++T   LS+ + V   ++  
Sbjct: 1830 GIQMLWTRDSEEALR-NAKFDKKIMQKTNQAFLELLNMLIEITTKDLSSMERVKYETLIT 1888

Query: 220  IHTY 231
            IH +
Sbjct: 1889 IHVH 1892


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.130    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,086,193
Number of Sequences: 219361
Number of extensions: 646290
Number of successful extensions: 1631
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)