>gb|AC007246.3| Homo sapiens BAC clone RP11-288L6 from 2, complete sequence
          Length = 149474

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 313  tcagtagttgttaaacaatttttttt 338
            ||||||||| ||||||||||||||||
Sbjct: 9509 tcagtagttcttaaacaatttttttt 9534

>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      accactgcccgtgcatagat 115
               ||||||||||||||||||||
Sbjct: 3319904 accactgcccgtgcatagat 3319923

>gb|AC122458.3| Mus musculus BAC clone RP24-270D10 from chromosome 8, complete sequence
          Length = 185268

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 4      tgcacacctgctcatgcatgcaca 27
              ||||||| ||||||||||||||||
Sbjct: 129574 tgcacacatgctcatgcatgcaca 129597

>gb|AC118012.9| Mus musculus chromosome 8, clone RP23-454D11, complete sequence
          Length = 192971

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     atgtgcatgcctagaaactg 77
              ||||||||||||||||||||
Sbjct: 119638 atgtgcatgcctagaaactg 119619

>gb|AC123869.4| Mus musculus BAC clone RP23-245M16 from 12, complete sequence
          Length = 167795

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   tgtttgtacatgtttgtatg 298
             ||||||||||||||||||||
Sbjct: 86530 tgtttgtacatgtttgtatg 86549

>emb|AL133476.17| Human DNA sequence from clone RP11-156G14 on chromosome 9p13.1-13.3
             Contains the 3' end of a novel gene, a protein associated
             with PRK1 (AWP1) pseudogene, a novel gene  (KIAA0375), a
             ribosomal protein L36a (L44L, RPL44) (RPL36A) pseudogene, 
             a novel gene, a ribosomal protein S29 (RPS29) pseudogene
             and a CpG island, complete sequence
          Length = 153826

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 176   ttttgacttctcacatatgttgta 199
             ||||| ||||||||||||||||||
Sbjct: 81609 ttttggcttctcacatatgttgta 81586

>gb|AC016839.12| Homo sapiens chromosome 18, clone RP11-399L5, complete sequence
          Length = 152689

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    ctagaaactggtgcaagatcatgg 91
             |||||||||||||| |||||||||
Sbjct: 24966 ctagaaactggtgccagatcatgg 24989

>gb|AC114478.2| Homo sapiens chromosome 3 clone RP11-333K5, complete sequence
          Length = 158276

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   ctgtttgtacatgtttgtat 297
             ||||||||||||||||||||
Sbjct: 18975 ctgtttgtacatgtttgtat 18994

>gb|AF334828.1| Homo sapiens cartilage-hair hypoplasia region gene sequence
          Length = 83958

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 176  ttttgacttctcacatatgttgta 199
            ||||| ||||||||||||||||||
Sbjct: 3060 ttttggcttctcacatatgttgta 3037

>gb|AC025775.6| Homo sapiens chromosome 5 clone CTD-2299B9, complete sequence
          Length = 95782

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   cacagatgacatccaacaat 162
             ||||||||||||||||||||
Sbjct: 62172 cacagatgacatccaacaat 62153

>gb|AC099560.2| Homo sapiens chromosome 3 clone RP11-761N21, complete sequence
          Length = 192169

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   tgtttgtacatgtttgtatg 298
             ||||||||||||||||||||
Sbjct: 91751 tgtttgtacatgtttgtatg 91770

>gb|AC160649.2| Pan troglodytes BAC clone CH251-568N12 from chromosome unknown,
             complete sequence
          Length = 192241

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   ctgtttgtacatgtttgtat 297
             ||||||||||||||||||||
Sbjct: 94997 ctgtttgtacatgtttgtat 95016

>gb|AC155247.2| Mus musculus BAC clone RP24-302C23 from chromosome 12, complete sequence
          Length = 144348

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    tgtttgtacatgtttgtatg 298
              ||||||||||||||||||||
Sbjct: 142789 tgtttgtacatgtttgtatg 142770

>gb|AC069019.8|AC069019 Mus musculus  BAC RP23-455N13 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 196175

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 308    tgttgtcagtagttgttaaacaat 331
              |||||||| |||||||||||||||
Sbjct: 189826 tgttgtcactagttgttaaacaat 189849

>gb|AC091021.8| Homo sapiens chromosome 18, clone RP11-786F14, complete sequence
          Length = 196622

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    ctagaaactggtgcaagatcatgg 91
             |||||||||||||| |||||||||
Sbjct: 11887 ctagaaactggtgccagatcatgg 11864

>emb|AL929502.10| Zebrafish DNA sequence from clone CH211-69G19 in linkage group 16,
              complete sequence
          Length = 165617

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 316    gtagttgttaaacaattttt 335
              ||||||||||||||||||||
Sbjct: 156528 gtagttgttaaacaattttt 156547

>emb|AL162759.4|CNS01RHZ Human chromosome 14 DNA sequence BAC R-785G15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 174273

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   ctgtttgtacatgtttgtat 297
             ||||||||||||||||||||
Sbjct: 23980 ctgtttgtacatgtttgtat 23961

>gb|AC117728.10| Mus musculus chromosome 6, clone RP24-126C21, complete sequence
          Length = 180605

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 318    agttgttaaacaattttttt 337
              ||||||||||||||||||||
Sbjct: 156109 agttgttaaacaattttttt 156128

>emb|BX284626.3| Mouse DNA sequence from clone RP23-76P19 on chromosome 11, complete
             sequence
          Length = 182810

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 308   tgttgtcagtagttgttaaacaat 331
             |||||||| |||||||||||||||
Sbjct: 26612 tgttgtcactagttgttaaacaat 26589

>emb|BX001041.6| Zebrafish DNA sequence from clone CH211-62M7, complete sequence
          Length = 167472

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    tccatggagagcacagatga 151
              ||||||||||||||||||||
Sbjct: 110850 tccatggagagcacagatga 110831


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,419,179
Number of Sequences: 3902068
Number of extensions: 3419179
Number of successful extensions: 82436
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82389
Number of HSP's gapped (non-prelim): 47
length of query: 348
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 326
effective length of database: 17,147,199,772
effective search space: 5589987125672
effective search space used: 5589987125672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)