ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal17c22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ345035.1|HVU345035 Hordeum vulgare partial mRNA for monode... 1116 0.0
2gb|BT009417.1| Triticum aestivum clone wlmk1.pk0007.f9:fis, full... 965 0.0
3ref|XM_467388.1| Oryza sativa (japonica cultivar-group), mRNA 505 e-140
4dbj|AK065585.1| Oryza sativa (japonica cultivar-group) cDNA clon... 505 e-140
5dbj|AK062096.1| Oryza sativa (japonica cultivar-group) cDNA clon... 505 e-140
6gb|AY106646.1| Zea mays PCO091252 mRNA sequence 470 e-129
7gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence 228 2e-56
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 228 2e-56
9dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic D... 228 2e-56
10dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic D... 228 2e-56
11ref|XM_467387.1| Oryza sativa (japonica cultivar-group), mRNA 186 5e-44
12emb|BX324134.11| Zebrafish DNA sequence from clone DKEY-103K8 in... 46 0.13
13gb|CP000316.1| Polaromonas sp. JS666, complete genome 44 0.49
14gb|DQ002408.1| Zea mays gypsy retrotransposon huck, and copia re... 42 2.0
15gb|CP000107.1| Ehrlichia canis str. Jake, complete genome 42 2.0
16emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chrom... 42 2.0
17gb|DQ068068.1| Uncultured bacterium BAC17H8, complete sequence 42 2.0
18gb|AC034187.6| Homo sapiens chromosome 3 clone RP11-202A21 map 3... 42 2.0
19gb|AF176315.2|AF176315 Homo sapiens chromosome 3 clone RP11-83M1... 42 2.0
20gb|AF025458.1| Caenorhabditis elegans cosmid C01B12, complete se... 40 7.7
21gb|AC160470.3| Mus musculus chromosome 3, clone RP24-74B11, comp... 40 7.7
22gb|AC139213.11| Mus musculus chromosome 7, clone RP23-341H2, com... 40 7.7
23gb|AC122836.4| Mus musculus BAC clone RP23-188B13 from 7, comple... 40 7.7
24gb|AC102076.9| Mus musculus chromosome 7, clone RP23-401P12, com... 40 7.7
25gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 7.7
26gb|AC157607.4| Mus musculus chromosome 1, clone RP23-401G11, com... 40 7.7
27gb|AC010157.12| Homo sapiens chromosome 10 clone RP11-202D18, co... 40 7.7
28gb|AC016967.24| Homo sapiens 3 BAC RP11-72E23 (Roswell Park Canc... 40 7.7
29gb|AC155944.3| Mus musculus 6 BAC RP24-493P12 (Roswell Park Canc... 40 7.7
30gb|AC099722.7| Mus musculus chromosome 3, clone RP23-282E13, com... 40 7.7
31dbj|AP001085.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 7.7
32gb|AC152923.2| Mus musculus BAC clone RP24-267O6 from 5, complet... 40 7.7
33gb|AC102340.10| Mus musculus chromosome 3, clone RP23-163J23, co... 40 7.7
34dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.7 
>emb|AJ345035.1|HVU345035 Hordeum vulgare partial mRNA for monodehydroascorbate reductase
          Length = 1250

 Score = 1116 bits (563), Expect = 0.0
 Identities = 566/567 (99%)
 Strand = Plus / Plus

                                                                       
Query: 2   ggaataagtggttcggatgctgaaaacatatgttatttgcgcaatcttgaagacgcggat 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34  ggaataagtggttcggatgctgaaaacatatgttatttgcgcaatcttgaagacgcggat 93

                                                                       
Query: 62  aaattagtgaatgcgatgagctcatgttctggtggaaatgctgttgtcatcggtggtggc 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  aaattagtgaatgcgatgagctcatgttctggtggaaatgctgttgtcatcggtggtggc 153

                                                                       
Query: 122 tacataggaatggaatgtgcagcagcattggttactaataagataaaagtaaccatggtc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tacataggaatggaatgtgcagcagcattggttactaataagataaaagtaaccatggtc 213

                                                                       
Query: 182 ttccctgaaaaacactgcatgggtcggctatttacagaaaaaattgctgaatattatgaa 241
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 214 ttccctgaaaaacactgcatgggtcggctatttacagaaaaacttgctgaatattatgaa 273

                                                                       
Query: 242 agctactacacttcgaaaggagttacttttaccaaaggaactgtgcttacatcatttgaa 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 agctactacacttcgaaaggagttacttttaccaaaggaactgtgcttacatcatttgaa 333

                                                                       
Query: 302 aaggactcaacagggaaggtgacttcggtaatcctaaaagatggtaaccaccttcctgct 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aaggactcaacagggaaggtgacttcggtaatcctaaaagatggtaaccaccttcctgct 393

                                                                       
Query: 362 gatatggtagtagttggtattgggatccgtgcaaataccagcctttttgaaggtcagctg 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gatatggtagtagttggtattgggatccgtgcaaataccagcctttttgaaggtcagctg 453

                                                                       
Query: 422 ctgatggagaaaggcggcataaaagtaaacgggcaaatgcaaaccagcgacagctcggtg 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ctgatggagaaaggcggcataaaagtaaacgggcaaatgcaaaccagcgacagctcggtg 513

                                                                       
Query: 482 tatgctgttggtgatgttgccgcgttccccatcaagctctttgacggcgatgtccgacgg 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tatgctgttggtgatgttgccgcgttccccatcaagctctttgacggcgatgtccgacgg 573

                                      
Query: 542 cttgaacatgttgactcggctcgtaga 568
           |||||||||||||||||||||||||||
Sbjct: 574 cttgaacatgttgactcggctcgtaga 600
to top
>gb|BT009417.1| Triticum aestivum clone wlmk1.pk0007.f9:fis, full insert mRNA
            sequence
          Length = 1821

 Score =  965 bits (487), Expect = 0.0
 Identities = 547/567 (96%)
 Strand = Plus / Plus

                                                                        
Query: 2    ggaataagtggttcggatgctgaaaacatatgttatttgcgcaatcttgaagacgcggat 61
            |||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 549  ggaataagcggttcagatgctgcaaacatatgttatttgcgcaatcttgaagacgcggat 608

                                                                        
Query: 62   aaattagtgaatgcgatgagctcatgttctggtggaaatgctgttgtcatcggtggtggc 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609  aaattagtgaatgcgatgagctcatgttctggtggaaatgctgttgtcatcggtggtggc 668

                                                                        
Query: 122  tacataggaatggaatgtgcagcagcattggttactaataagataaaagtaaccatggtc 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669  tacataggaatggaatgtgcagcagcattggttactaataagataaaagtaaccatggtc 728

                                                                        
Query: 182  ttccctgaaaaacactgcatgggtcggctatttacagaaaaaattgctgaatattatgaa 241
            || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 729  tttcctgaaaaacactgcatgggtcggctatttacagaaaaaattgcagaatattatgaa 788

                                                                        
Query: 242  agctactacacttcgaaaggagttacttttaccaaaggaactgtgcttacatcatttgaa 301
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 789  agctactacactttgaaaggagttacttttaccaaaggaactgtgcttacatcctttgaa 848

                                                                        
Query: 302  aaggactcaacagggaaggtgacttcggtaatcctaaaagatggtaaccaccttcctgct 361
            || ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 849  aaagactcaacagggaaggtgacttcagtaatcctaaaagatggcaaccaccttcctgct 908

                                                                        
Query: 362  gatatggtagtagttggtattgggatccgtgcaaataccagcctttttgaaggtcagctg 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 909  gatatggtagtagttggtattgggatccgtgcaaataccagcctttttgaaggccagctg 968

                                                                        
Query: 422  ctgatggagaaaggcggcataaaagtaaacgggcaaatgcaaaccagcgacagctcggtg 481
            ||||||||||| |||||||| || ||||| |||||||||||||| ||||||||||| |||
Sbjct: 969  ctgatggagaagggcggcattaaggtaaatgggcaaatgcaaactagcgacagctccgtg 1028

                                                                        
Query: 482  tatgctgttggtgatgttgccgcgttccccatcaagctctttgacggcgatgtccgacgg 541
            ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 1029 tatgctgttggtgatgttgccgcgttccccatcaagctctttgacggtgatatccgacgg 1088

                                       
Query: 542  cttgaacatgttgactcggctcgtaga 568
            ||||| |||||||||||||||||||||
Sbjct: 1089 cttgagcatgttgactcggctcgtaga 1115
to top
>ref|XM_467388.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1822

 Score =  505 bits (255), Expect = e-140
 Identities = 468/539 (86%)
 Strand = Plus / Plus

                                                                        
Query: 26   aacatatgttatttgcgcaatcttgaagacgcggataaattagtgaatgcgatgagctca 85
            |||||||||||||||||||||||||| || |||||||| |||||||||| |||||  |||
Sbjct: 597  aacatatgttatttgcgcaatcttgatgatgcggataagttagtgaatgtgatgaaatca 656

                                                                        
Query: 86   tgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaatgtgcagca 145
            ||| |||||||||||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 657  tgtcctggtggaaatgctgtcgtcattggtggtggctatataggaatggagtgcgcagca 716

                                                                        
Query: 146  gcattggttactaataagataaaagtaaccatggtcttccctgaaaaacactgcatgggt 205
            |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||  
Sbjct: 717  gcattggttactaataggataaaagtaaccatggtcttccctgaaagccactgcatggcc 776

                                                                        
Query: 206  cggctatttacagaaaaaattgctgaatattatgaaagctactacacttcgaaaggagtt 265
            || |||||||||  ||||||||| ||||||||||| | ||| |||||||| ||||| |||
Sbjct: 777  cgtctatttacaccaaaaattgcagaatattatgagaactattacacttcaaaaggtgtt 836

                                                                        
Query: 266  acttttaccaaaggaactgtgcttacatcatttgaaaaggactcaacagggaaggtgact 325
            || |||  ||||||||||||||||||||| |||||||| || || |||||||||||||||
Sbjct: 837  acctttgtcaaaggaactgtgcttacatcctttgaaaaagattcgacagggaaggtgact 896

                                                                        
Query: 326  tcggtaatcctaaaagatggtaaccaccttcctgctgatatggtagtagttggtattggg 385
            || |||||||| ||||||||||| ||||||||||| |||||||| || ||||||||||| 
Sbjct: 897  tcagtaatcctgaaagatggtaaacaccttcctgccgatatggttgtggttggtattggc 956

                                                                        
Query: 386  atccgtgcaaataccagcctttttgaaggtcagctgctgatggagaaaggcggcataaaa 445
            ||||||||||  ||  | |||||||||||||||||| |||||||| |||| || ||||| 
Sbjct: 957  atccgtgcaagcactggtctttttgaaggtcagctgttgatggagcaaggtgggataaag 1016

                                                                        
Query: 446  gtaaacgggcaaatgcaaaccagcgacagctcggtgtatgctgttggtgatgttgccgcg 505
            |||||||| ||||||  ||| |||||  | || || ||||| ||||| |||||||| || 
Sbjct: 1017 gtaaacggacaaatgttaacaagcgatggttctgtatatgccgttggcgatgttgctgcc 1076

                                                                       
Query: 506  ttccccatcaagctctttgacggcgatgtccgacggcttgaacatgttgactcggctcg 564
            ||||| |||||||||||||| || | | | ||||||||||| ||||||||||| |||||
Sbjct: 1077 ttccctatcaagctctttgatggtgttatacgacggcttgagcatgttgactcagctcg 1135
to top
>dbj|AK065585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M23, full
            insert sequence
          Length = 1821

 Score =  505 bits (255), Expect = e-140
 Identities = 468/539 (86%)
 Strand = Plus / Plus

                                                                        
Query: 26   aacatatgttatttgcgcaatcttgaagacgcggataaattagtgaatgcgatgagctca 85
            |||||||||||||||||||||||||| || |||||||| |||||||||| |||||  |||
Sbjct: 596  aacatatgttatttgcgcaatcttgatgatgcggataagttagtgaatgtgatgaaatca 655

                                                                        
Query: 86   tgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaatgtgcagca 145
            ||| |||||||||||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 656  tgtcctggtggaaatgctgtcgtcattggtggtggctatataggaatggagtgcgcagca 715

                                                                        
Query: 146  gcattggttactaataagataaaagtaaccatggtcttccctgaaaaacactgcatgggt 205
            |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||  
Sbjct: 716  gcattggttactaataggataaaagtaaccatggtcttccctgaaagccactgcatggcc 775

                                                                        
Query: 206  cggctatttacagaaaaaattgctgaatattatgaaagctactacacttcgaaaggagtt 265
            || |||||||||  ||||||||| ||||||||||| | ||| |||||||| ||||| |||
Sbjct: 776  cgtctatttacaccaaaaattgcagaatattatgagaactattacacttcaaaaggtgtt 835

                                                                        
Query: 266  acttttaccaaaggaactgtgcttacatcatttgaaaaggactcaacagggaaggtgact 325
            || |||  ||||||||||||||||||||| |||||||| || || |||||||||||||||
Sbjct: 836  acctttgtcaaaggaactgtgcttacatcctttgaaaaagattcgacagggaaggtgact 895

                                                                        
Query: 326  tcggtaatcctaaaagatggtaaccaccttcctgctgatatggtagtagttggtattggg 385
            || |||||||| ||||||||||| ||||||||||| |||||||| || ||||||||||| 
Sbjct: 896  tcagtaatcctgaaagatggtaaacaccttcctgccgatatggttgtggttggtattggc 955

                                                                        
Query: 386  atccgtgcaaataccagcctttttgaaggtcagctgctgatggagaaaggcggcataaaa 445
            ||||||||||  ||  | |||||||||||||||||| |||||||| |||| || ||||| 
Sbjct: 956  atccgtgcaagcactggtctttttgaaggtcagctgttgatggagcaaggtgggataaag 1015

                                                                        
Query: 446  gtaaacgggcaaatgcaaaccagcgacagctcggtgtatgctgttggtgatgttgccgcg 505
            |||||||| ||||||  ||| |||||  | || || ||||| ||||| |||||||| || 
Sbjct: 1016 gtaaacggacaaatgttaacaagcgatggttctgtatatgccgttggcgatgttgctgcc 1075

                                                                       
Query: 506  ttccccatcaagctctttgacggcgatgtccgacggcttgaacatgttgactcggctcg 564
            ||||| |||||||||||||| || | | | ||||||||||| ||||||||||| |||||
Sbjct: 1076 ttccctatcaagctctttgatggtgttatacgacggcttgagcatgttgactcagctcg 1134
to top
>dbj|AK062096.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H12, full
           insert sequence
          Length = 1246

 Score =  505 bits (255), Expect = e-140
 Identities = 468/539 (86%)
 Strand = Plus / Plus

                                                                       
Query: 26  aacatatgttatttgcgcaatcttgaagacgcggataaattagtgaatgcgatgagctca 85
           |||||||||||||||||||||||||| || |||||||| |||||||||| |||||  |||
Sbjct: 39  aacatatgttatttgcgcaatcttgatgatgcggataagttagtgaatgtgatgaaatca 98

                                                                       
Query: 86  tgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaatgtgcagca 145
           ||| |||||||||||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 99  tgtcctggtggaaatgctgtcgtcattggtggtggctatataggaatggagtgcgcagca 158

                                                                       
Query: 146 gcattggttactaataagataaaagtaaccatggtcttccctgaaaaacactgcatgggt 205
           |||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||  
Sbjct: 159 gcattggttactaataggataaaagtaaccatggtcttccctgaaagccactgcatggcc 218

                                                                       
Query: 206 cggctatttacagaaaaaattgctgaatattatgaaagctactacacttcgaaaggagtt 265
           || |||||||||  ||||||||| ||||||||||| | ||| |||||||| ||||| |||
Sbjct: 219 cgtctatttacaccaaaaattgcagaatattatgagaactattacacttcaaaaggtgtt 278

                                                                       
Query: 266 acttttaccaaaggaactgtgcttacatcatttgaaaaggactcaacagggaaggtgact 325
           || |||  ||||||||||||||||||||| |||||||| || || |||||||||||||||
Sbjct: 279 acctttgtcaaaggaactgtgcttacatcctttgaaaaagattcgacagggaaggtgact 338

                                                                       
Query: 326 tcggtaatcctaaaagatggtaaccaccttcctgctgatatggtagtagttggtattggg 385
           || |||||||| ||||||||||| ||||||||||| |||||||| || ||||||||||| 
Sbjct: 339 tcagtaatcctgaaagatggtaaacaccttcctgccgatatggttgtggttggtattggc 398

                                                                       
Query: 386 atccgtgcaaataccagcctttttgaaggtcagctgctgatggagaaaggcggcataaaa 445
           ||||||||||  ||  | |||||||||||||||||| |||||||| |||| || ||||| 
Sbjct: 399 atccgtgcaagcactggtctttttgaaggtcagctgttgatggagcaaggtgggataaag 458

                                                                       
Query: 446 gtaaacgggcaaatgcaaaccagcgacagctcggtgtatgctgttggtgatgttgccgcg 505
           |||||||| ||||||  ||| |||||  | || || ||||| ||||| |||||||| || 
Sbjct: 459 gtaaacggacaaatgttaacaagcgatggttctgtatatgccgttggcgatgttgctgcc 518

                                                                      
Query: 506 ttccccatcaagctctttgacggcgatgtccgacggcttgaacatgttgactcggctcg 564
           ||||| |||||||||||||| || | | | ||||||||||| ||||||||||| |||||
Sbjct: 519 ttccctatcaagctctttgatggtgttatacgacggcttgagcatgttgactcagctcg 577
to top
>gb|AY106646.1| Zea mays PCO091252 mRNA sequence
          Length = 1867

 Score =  470 bits (237), Expect = e-129
 Identities = 482/564 (85%), Gaps = 6/564 (1%)
 Strand = Plus / Plus

                                                                        
Query: 11   ggttcggatgctgaaaacatatgttatttgcgcaatcttgaagacgcggataaattagtg 70
            ||||| ||||||  |||||||||||||||||||||  | || ||||||||||| || |||
Sbjct: 526  ggttcagatgcttcaaacatatgttatttgcgcaacatcgatgacgcggataagttggtg 585

                                                                        
Query: 71   aatgcgatgagctcatgttctggtggaaatgctgttgtcatcggtggtggctacatagga 130
            | || |||||  |||||| |||||||||||||||||||||| |||||||||||||| |||
Sbjct: 586  agtgtgatgaaatcatgtcctggtggaaatgctgttgtcattggtggtggctacattgga 645

                                                                        
Query: 131  atggaatgtgcagcagcattggttactaataagataaaagtaaccatggtcttccctgaa 190
            ||||| |||||||| |||||||||||||| ||||| |  || ||||||||||||||||| 
Sbjct: 646  atggagtgtgcagcggcattggttactaacaagattagggtcaccatggtcttccctgag 705

                                                                        
Query: 191  aaacactgcatgggtcggctatttacagaaaaaattgctgaatattatgaaagctactac 250
            ||||||||||||||||| |||||||||  ||||||||| |||| |||||||| |||||||
Sbjct: 706  aaacactgcatgggtcgtctatttacaccaaaaattgcagaattttatgaaaactactac 765

                                                                        
Query: 251  acttcgaaaggagttacttttaccaaaggaactgtgcttacatcatttgaaaaggactca 310
            || |||||||| || || |||   |||||||||||||||||||| |||||||| ||  | 
Sbjct: 766  acctcgaaaggggtcacctttgttaaaggaactgtgcttacatcctttgaaaaagatacg 825

                                                                        
Query: 311  acagggaaggtgacttcggtaatcctaaaagatggtaaccaccttcctgctgatatggta 370
            || |||||||||||| | ||||| || ||||||||||  |||||||||||||||||||||
Sbjct: 826  acggggaaggtgactgcagtaatactcaaagatggtaggcaccttcctgctgatatggta 885

                                                                        
Query: 371  gtagttggtattgggatccgtgcaaataccagcctttttgaaggtcagctgctgatg--- 427
            |||||||||||||| ||||||||||| || ||||||||||||||||| ||| |||||   
Sbjct: 886  gtagttggtattggcatccgtgcaaacactagcctttttgaaggtcaactgatgatgtca 945

                                                                        
Query: 428  ---gagaaaggcggcataaaagtaaacgggcaaatgcaaaccagcgacagctcggtgtat 484
               ||||| || || ||||| ||||| || ||  |||| || ||||||||||| ||||||
Sbjct: 946  acagagaatggtgggataaaggtaaatggacagctgcagacaagcgacagctctgtgtat 1005

                                                                        
Query: 485  gctgttggtgatgttgccgcgttccccatcaagctctttgacggcgatgtccgacggctt 544
            || ||||| ||||| |||||||||||||||||||| |||||||  ||| |||||||||| 
Sbjct: 1006 gccgttggcgatgtggccgcgttccccatcaagctttttgacgatgatatccgacggctc 1065

                                    
Query: 545  gaacatgttgactcggctcgtaga 568
            || ||||| ||||| |||||||||
Sbjct: 1066 gagcatgtggactcagctcgtaga 1089
to top
>gb|AF480496.1| Oryza sativa clone BAC 49D11, complete sequence
          Length = 158050

 Score =  228 bits (115), Expect = 2e-56
 Identities = 160/175 (91%)
 Strand = Plus / Plus

                                                                          
Query: 26     aacatatgttatttgcgcaatcttgaagacgcggataaattagtgaatgcgatgagctca 85
              |||||||||||||||||||||||||| || |||||||| |||||||||| |||||  |||
Sbjct: 112181 aacatatgttatttgcgcaatcttgatgatgcggataagttagtgaatgtgatgaaatca 112240

                                                                          
Query: 86     tgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaatgtgcagca 145
              ||| |||||||||||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 112241 tgtcctggtggaaatgctgtcgtcattggtggtggctatataggaatggagtgcgcagca 112300

                                                                     
Query: 146    gcattggttactaataagataaaagtaaccatggtcttccctgaaaaacactgca 200
              |||||||||||||||| |||||||||||||||||||||||||||||  |||||||
Sbjct: 112301 gcattggttactaataggataaaagtaaccatggtcttccctgaaagccactgca 112355



 Score =  188 bits (95), Expect = 1e-44
 Identities = 209/247 (84%)
 Strand = Plus / Plus

                                                                          
Query: 318    aggtgacttcggtaatcctaaaagatggtaaccaccttcctgctgatatggtagtagttg 377
              |||||||||| |||||||| ||||||||||| ||||||||||| |||||||| || ||||
Sbjct: 113238 aggtgacttcagtaatcctgaaagatggtaaacaccttcctgccgatatggttgtggttg 113297

                                                                          
Query: 378    gtattgggatccgtgcaaataccagcctttttgaaggtcagctgctgatggagaaaggcg 437
              ||||||| ||||||||||  ||  | |||||||||||||||||| |||||||| |||| |
Sbjct: 113298 gtattggcatccgtgcaagcactggtctttttgaaggtcagctgttgatggagcaaggtg 113357

                                                                          
Query: 438    gcataaaagtaaacgggcaaatgcaaaccagcgacagctcggtgtatgctgttggtgatg 497
              | ||||| |||||||| ||||||  ||| |||||  | || || ||||| ||||| ||||
Sbjct: 113358 ggataaaggtaaacggacaaatgttaacaagcgatggttctgtatatgccgttggcgatg 113417

                                                                          
Query: 498    ttgccgcgttccccatcaagctctttgacggcgatgtccgacggcttgaacatgttgact 557
              |||| || ||||| |||||||||||||| || | | | ||||||||||| ||||||||||
Sbjct: 113418 ttgctgccttccctatcaagctctttgatggtgttatacgacggcttgagcatgttgact 113477

                     
Query: 558    cggctcg 564
              | |||||
Sbjct: 113478 cagctcg 113484



 Score =  143 bits (72), Expect = 7e-31
 Identities = 111/124 (89%)
 Strand = Plus / Plus

                                                                          
Query: 77     atgagctcatgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaa 136
              ||||| |||||| | ||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 116181 atgagatcatgtcccggtggaaatgccgttgtcgtcggtggtggatacataggaatggaa 116240

                                                                          
Query: 137    tgtgcagcagcattggttactaataagataaaagtaaccatggtcttccctgaaaaacac 196
              |||||||| |||||||| || || || |||||||| ||||||||||||||| ||||||||
Sbjct: 116241 tgtgcagcggcattggtcacaaacaacataaaagttaccatggtcttccctaaaaaacac 116300

                  
Query: 197    tgca 200
              ||||
Sbjct: 116301 tgca 116304



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Plus

                                                                          
Query: 209    ctatttacagaaaaaattgctgaatattatgaaagctactacacttcgaaaggagttact 268
              |||||||||  ||||||||| ||||||||||| | ||| |||||||| ||||| ||||| 
Sbjct: 112497 ctatttacaccaaaaattgcagaatattatgagaactattacacttcaaaaggtgttacc 112556

                                                                     
Query: 269    tttaccaaaggaactgtgcttacatcatttgaaaaggactcaacagggaaggtga 323
              |||  ||||||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 112557 tttgtcaaaggaactgtgcttacatcctttgaaaaagattcgacagggaaggtga 112611



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 221    aaaattgctgaatattatgaaagctactacacttcgaaaggagttacttt 270
              ||||||||||| | |||||| ||||| ||| |||| | ||||||||||||
Sbjct: 116416 aaaattgctgagttttatgagagctattacgcttcaagaggagttacttt 116465



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                          
Query: 475    ctcggtgtatgctgttggtgatgttgccgcgttccccatcaagctctttgacggcgatgt 534
              ||||||||| || || || || || |||||||||||| ||||||| || | |||||| ||
Sbjct: 116754 ctcggtgtacgccgtgggcgacgtggccgcgttccccgtcaagctgttcggcggcgacgt 116813

                       
Query: 535    ccgacggct 543
              ||| |||||
Sbjct: 116814 ccgccggct 116822
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  228 bits (115), Expect = 2e-56
 Identities = 160/175 (91%)
 Strand = Plus / Minus

                                                                            
Query: 26       aacatatgttatttgcgcaatcttgaagacgcggataaattagtgaatgcgatgagctca 85
                |||||||||||||||||||||||||| || |||||||| |||||||||| |||||  |||
Sbjct: 29250450 aacatatgttatttgcgcaatcttgatgatgcggataagttagtgaatgtgatgaaatca 29250391

                                                                            
Query: 86       tgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaatgtgcagca 145
                ||| |||||||||||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 29250390 tgtcctggtggaaatgctgtcgtcattggtggtggctatataggaatggagtgcgcagca 29250331

                                                                       
Query: 146      gcattggttactaataagataaaagtaaccatggtcttccctgaaaaacactgca 200
                |||||||||||||||| |||||||||||||||||||||||||||||  |||||||
Sbjct: 29250330 gcattggttactaataggataaaagtaaccatggtcttccctgaaagccactgca 29250276



 Score =  188 bits (95), Expect = 1e-44
 Identities = 209/247 (84%)
 Strand = Plus / Minus

                                                                            
Query: 318      aggtgacttcggtaatcctaaaagatggtaaccaccttcctgctgatatggtagtagttg 377
                |||||||||| |||||||| ||||||||||| ||||||||||| |||||||| || ||||
Sbjct: 29249393 aggtgacttcagtaatcctgaaagatggtaaacaccttcctgccgatatggttgtggttg 29249334

                                                                            
Query: 378      gtattgggatccgtgcaaataccagcctttttgaaggtcagctgctgatggagaaaggcg 437
                ||||||| ||||||||||  ||  | |||||||||||||||||| |||||||| |||| |
Sbjct: 29249333 gtattggcatccgtgcaagcactggtctttttgaaggtcagctgttgatggagcaaggtg 29249274

                                                                            
Query: 438      gcataaaagtaaacgggcaaatgcaaaccagcgacagctcggtgtatgctgttggtgatg 497
                | ||||| |||||||| ||||||  ||| |||||  | || || ||||| ||||| ||||
Sbjct: 29249273 ggataaaggtaaacggacaaatgttaacaagcgatggttctgtatatgccgttggcgatg 29249214

                                                                            
Query: 498      ttgccgcgttccccatcaagctctttgacggcgatgtccgacggcttgaacatgttgact 557
                |||| || ||||| |||||||||||||| || | | | ||||||||||| ||||||||||
Sbjct: 29249213 ttgctgccttccctatcaagctctttgatggtgttatacgacggcttgagcatgttgact 29249154

                       
Query: 558      cggctcg 564
                | |||||
Sbjct: 29249153 cagctcg 29249147



 Score =  143 bits (72), Expect = 7e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                            
Query: 77       atgagctcatgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaa 136
                ||||| |||||| | ||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 29246450 atgagatcatgtcccggtggaaatgccgttgtcgtcggtggtggatacataggaatggaa 29246391

                                                                            
Query: 137      tgtgcagcagcattggttactaataagataaaagtaaccatggtcttccctgaaaaacac 196
                |||||||| |||||||| || || || |||||||| ||||||||||||||| ||||||||
Sbjct: 29246390 tgtgcagcggcattggtcacaaacaacataaaagttaccatggtcttccctaaaaaacac 29246331

                    
Query: 197      tgca 200
                ||||
Sbjct: 29246330 tgca 29246327



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                            
Query: 209      ctatttacagaaaaaattgctgaatattatgaaagctactacacttcgaaaggagttact 268
                |||||||||  ||||||||| ||||||||||| | ||| |||||||| ||||| ||||| 
Sbjct: 29250134 ctatttacaccaaaaattgcagaatattatgagaactattacacttcaaaaggtgttacc 29250075

                                                                       
Query: 269      tttaccaaaggaactgtgcttacatcatttgaaaaggactcaacagggaaggtga 323
                |||  ||||||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 29250074 tttgtcaaaggaactgtgcttacatcctttgaaaaagattcgacagggaaggtga 29250020



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 221      aaaattgctgaatattatgaaagctactacacttcgaaaggagttacttt 270
                ||||||||||| | |||||| ||||| ||| |||| | ||||||||||||
Sbjct: 29246215 aaaattgctgagttttatgagagctattacgcttcaagaggagttacttt 29246166



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                            
Query: 475      ctcggtgtatgctgttggtgatgttgccgcgttccccatcaagctctttgacggcgatgt 534
                ||||||||| || || || || || |||||||||||| ||||||| || | |||||| ||
Sbjct: 29245877 ctcggtgtacgccgtgggcgacgtggccgcgttccccgtcaagctgttcggcggcgacgt 29245818

                         
Query: 535      ccgacggct 543
                ||| |||||
Sbjct: 29245817 ccgccggct 29245809
to top
>dbj|AP005844.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0060O16
          Length = 164373

 Score =  228 bits (115), Expect = 2e-56
 Identities = 160/175 (91%)
 Strand = Plus / Minus

                                                                         
Query: 26    aacatatgttatttgcgcaatcttgaagacgcggataaattagtgaatgcgatgagctca 85
             |||||||||||||||||||||||||| || |||||||| |||||||||| |||||  |||
Sbjct: 47795 aacatatgttatttgcgcaatcttgatgatgcggataagttagtgaatgtgatgaaatca 47736

                                                                         
Query: 86    tgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaatgtgcagca 145
             ||| |||||||||||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 47735 tgtcctggtggaaatgctgtcgtcattggtggtggctatataggaatggagtgcgcagca 47676

                                                                    
Query: 146   gcattggttactaataagataaaagtaaccatggtcttccctgaaaaacactgca 200
             |||||||||||||||| |||||||||||||||||||||||||||||  |||||||
Sbjct: 47675 gcattggttactaataggataaaagtaaccatggtcttccctgaaagccactgca 47621



 Score =  188 bits (95), Expect = 1e-44
 Identities = 209/247 (84%)
 Strand = Plus / Minus

                                                                         
Query: 318   aggtgacttcggtaatcctaaaagatggtaaccaccttcctgctgatatggtagtagttg 377
             |||||||||| |||||||| ||||||||||| ||||||||||| |||||||| || ||||
Sbjct: 46738 aggtgacttcagtaatcctgaaagatggtaaacaccttcctgccgatatggttgtggttg 46679

                                                                         
Query: 378   gtattgggatccgtgcaaataccagcctttttgaaggtcagctgctgatggagaaaggcg 437
             ||||||| ||||||||||  ||  | |||||||||||||||||| |||||||| |||| |
Sbjct: 46678 gtattggcatccgtgcaagcactggtctttttgaaggtcagctgttgatggagcaaggtg 46619

                                                                         
Query: 438   gcataaaagtaaacgggcaaatgcaaaccagcgacagctcggtgtatgctgttggtgatg 497
             | ||||| |||||||| ||||||  ||| |||||  | || || ||||| ||||| ||||
Sbjct: 46618 ggataaaggtaaacggacaaatgttaacaagcgatggttctgtatatgccgttggcgatg 46559

                                                                         
Query: 498   ttgccgcgttccccatcaagctctttgacggcgatgtccgacggcttgaacatgttgact 557
             |||| || ||||| |||||||||||||| || | | | ||||||||||| ||||||||||
Sbjct: 46558 ttgctgccttccctatcaagctctttgatggtgttatacgacggcttgagcatgttgact 46499

                    
Query: 558   cggctcg 564
             | |||||
Sbjct: 46498 cagctcg 46492



 Score =  143 bits (72), Expect = 7e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                         
Query: 77    atgagctcatgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaa 136
             ||||| |||||| | ||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 43795 atgagatcatgtcccggtggaaatgccgttgtcgtcggtggtggatacataggaatggaa 43736

                                                                         
Query: 137   tgtgcagcagcattggttactaataagataaaagtaaccatggtcttccctgaaaaacac 196
             |||||||| |||||||| || || || |||||||| ||||||||||||||| ||||||||
Sbjct: 43735 tgtgcagcggcattggtcacaaacaacataaaagttaccatggtcttccctaaaaaacac 43676

                 
Query: 197   tgca 200
             ||||
Sbjct: 43675 tgca 43672



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                         
Query: 209   ctatttacagaaaaaattgctgaatattatgaaagctactacacttcgaaaggagttact 268
             |||||||||  ||||||||| ||||||||||| | ||| |||||||| ||||| ||||| 
Sbjct: 47479 ctatttacaccaaaaattgcagaatattatgagaactattacacttcaaaaggtgttacc 47420

                                                                    
Query: 269   tttaccaaaggaactgtgcttacatcatttgaaaaggactcaacagggaaggtga 323
             |||  ||||||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 47419 tttgtcaaaggaactgtgcttacatcctttgaaaaagattcgacagggaaggtga 47365



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 221   aaaattgctgaatattatgaaagctactacacttcgaaaggagttacttt 270
             ||||||||||| | |||||| ||||| ||| |||| | ||||||||||||
Sbjct: 43560 aaaattgctgagttttatgagagctattacgcttcaagaggagttacttt 43511



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                         
Query: 475   ctcggtgtatgctgttggtgatgttgccgcgttccccatcaagctctttgacggcgatgt 534
             ||||||||| || || || || || |||||||||||| ||||||| || | |||||| ||
Sbjct: 43222 ctcggtgtacgccgtgggcgacgtggccgcgttccccgtcaagctgttcggcggcgacgt 43163

                      
Query: 535   ccgacggct 543
             ||| |||||
Sbjct: 43162 ccgccggct 43154
to top
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0680A05
          Length = 168092

 Score =  228 bits (115), Expect = 2e-56
 Identities = 160/175 (91%)
 Strand = Plus / Minus

                                                                          
Query: 26     aacatatgttatttgcgcaatcttgaagacgcggataaattagtgaatgcgatgagctca 85
              |||||||||||||||||||||||||| || |||||||| |||||||||| |||||  |||
Sbjct: 140418 aacatatgttatttgcgcaatcttgatgatgcggataagttagtgaatgtgatgaaatca 140359

                                                                          
Query: 86     tgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaatgtgcagca 145
              ||| |||||||||||||||| ||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 140358 tgtcctggtggaaatgctgtcgtcattggtggtggctatataggaatggagtgcgcagca 140299

                                                                     
Query: 146    gcattggttactaataagataaaagtaaccatggtcttccctgaaaaacactgca 200
              |||||||||||||||| |||||||||||||||||||||||||||||  |||||||
Sbjct: 140298 gcattggttactaataggataaaagtaaccatggtcttccctgaaagccactgca 140244



 Score =  188 bits (95), Expect = 1e-44
 Identities = 209/247 (84%)
 Strand = Plus / Minus

                                                                          
Query: 318    aggtgacttcggtaatcctaaaagatggtaaccaccttcctgctgatatggtagtagttg 377
              |||||||||| |||||||| ||||||||||| ||||||||||| |||||||| || ||||
Sbjct: 139361 aggtgacttcagtaatcctgaaagatggtaaacaccttcctgccgatatggttgtggttg 139302

                                                                          
Query: 378    gtattgggatccgtgcaaataccagcctttttgaaggtcagctgctgatggagaaaggcg 437
              ||||||| ||||||||||  ||  | |||||||||||||||||| |||||||| |||| |
Sbjct: 139301 gtattggcatccgtgcaagcactggtctttttgaaggtcagctgttgatggagcaaggtg 139242

                                                                          
Query: 438    gcataaaagtaaacgggcaaatgcaaaccagcgacagctcggtgtatgctgttggtgatg 497
              | ||||| |||||||| ||||||  ||| |||||  | || || ||||| ||||| ||||
Sbjct: 139241 ggataaaggtaaacggacaaatgttaacaagcgatggttctgtatatgccgttggcgatg 139182

                                                                          
Query: 498    ttgccgcgttccccatcaagctctttgacggcgatgtccgacggcttgaacatgttgact 557
              |||| || ||||| |||||||||||||| || | | | ||||||||||| ||||||||||
Sbjct: 139181 ttgctgccttccctatcaagctctttgatggtgttatacgacggcttgagcatgttgact 139122

                     
Query: 558    cggctcg 564
              | |||||
Sbjct: 139121 cagctcg 139115



 Score =  143 bits (72), Expect = 7e-31
 Identities = 111/124 (89%)
 Strand = Plus / Minus

                                                                          
Query: 77     atgagctcatgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaa 136
              ||||| |||||| | ||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 136418 atgagatcatgtcccggtggaaatgccgttgtcgtcggtggtggatacataggaatggaa 136359

                                                                          
Query: 137    tgtgcagcagcattggttactaataagataaaagtaaccatggtcttccctgaaaaacac 196
              |||||||| |||||||| || || || |||||||| ||||||||||||||| ||||||||
Sbjct: 136358 tgtgcagcggcattggtcacaaacaacataaaagttaccatggtcttccctaaaaaacac 136299

                  
Query: 197    tgca 200
              ||||
Sbjct: 136298 tgca 136295



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                          
Query: 209    ctatttacagaaaaaattgctgaatattatgaaagctactacacttcgaaaggagttact 268
              |||||||||  ||||||||| ||||||||||| | ||| |||||||| ||||| ||||| 
Sbjct: 140102 ctatttacaccaaaaattgcagaatattatgagaactattacacttcaaaaggtgttacc 140043

                                                                     
Query: 269    tttaccaaaggaactgtgcttacatcatttgaaaaggactcaacagggaaggtga 323
              |||  ||||||||||||||||||||| |||||||| || || |||||||||||||
Sbjct: 140042 tttgtcaaaggaactgtgcttacatcctttgaaaaagattcgacagggaaggtga 139988



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 221    aaaattgctgaatattatgaaagctactacacttcgaaaggagttacttt 270
              ||||||||||| | |||||| ||||| ||| |||| | ||||||||||||
Sbjct: 136183 aaaattgctgagttttatgagagctattacgcttcaagaggagttacttt 136134



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                          
Query: 475    ctcggtgtatgctgttggtgatgttgccgcgttccccatcaagctctttgacggcgatgt 534
              ||||||||| || || || || || |||||||||||| ||||||| || | |||||| ||
Sbjct: 135845 ctcggtgtacgccgtgggcgacgtggccgcgttccccgtcaagctgttcggcggcgacgt 135786

                       
Query: 535    ccgacggct 543
              ||| |||||
Sbjct: 135785 ccgccggct 135777
to top
>ref|XM_467387.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1440

 Score =  186 bits (94), Expect = 5e-44
 Identities = 169/194 (87%)
 Strand = Plus / Plus

                                                                       
Query: 77  atgagctcatgttctggtggaaatgctgttgtcatcggtggtggctacataggaatggaa 136
           ||||| |||||| | ||||||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 475 atgagatcatgtcccggtggaaatgccgttgtcgtcggtggtggatacataggaatggaa 534

                                                                       
Query: 137 tgtgcagcagcattggttactaataagataaaagtaaccatggtcttccctgaaaaacac 196
           |||||||| |||||||| || || || |||||||| ||||||||||||||| ||||||||
Sbjct: 535 tgtgcagcggcattggtcacaaacaacataaaagttaccatggtcttccctaaaaaacac 594

                                                                       
Query: 197 tgcatgggtcggctatttacagaaaaaattgctgaatattatgaaagctactacacttcg 256
           ||||||||||| || ||||||   ||||||||||| | |||||| ||||| ||| |||| 
Sbjct: 595 tgcatgggtcgtctttttacaccgaaaattgctgagttttatgagagctattacgcttca 654

                         
Query: 257 aaaggagttacttt 270
           | ||||||||||||
Sbjct: 655 agaggagttacttt 668



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 57/69 (82%)
 Strand = Plus / Plus

                                                                       
Query: 475 ctcggtgtatgctgttggtgatgttgccgcgttccccatcaagctctttgacggcgatgt 534
           ||||||||| || || || || || |||||||||||| ||||||| || | |||||| ||
Sbjct: 870 ctcggtgtacgccgtgggcgacgtggccgcgttccccgtcaagctgttcggcggcgacgt 929

                    
Query: 535 ccgacggct 543
           ||| |||||
Sbjct: 930 ccgccggct 938
to top
>emb|BX324134.11| Zebrafish DNA sequence from clone DKEY-103K8 in linkage group 6,
            complete sequence
          Length = 219514

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 161  aagataaaagtaaccatggtctt 183
            |||||||||||||||||||||||
Sbjct: 3310 aagataaaagtaaccatggtctt 3332
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 95      ggaaatgctgttgtcatcggtggtgg 120
               |||||||| |||||||||||||||||
Sbjct: 1398867 ggaaatgcggttgtcatcggtggtgg 1398842
to top
>gb|DQ002408.1| Zea mays gypsy retrotransposon huck, and copia retrotransposon ji,
             complete sequence; and helitron Mo17_14594, complete
             sequence
          Length = 57607

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 244   ctactacacttcgaaaggagttacttttaccaaaggaactg 284
             ||||||| | ||||||||||| |||||||  ||||||||||
Sbjct: 54252 ctactacgcatcgaaaggagtcacttttataaaaggaactg 54292
to top
>gb|CP000107.1| Ehrlichia canis str. Jake, complete genome
          Length = 1315030

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 213    ttacagaaaaaattgctgaat 233
              |||||||||||||||||||||
Sbjct: 255510 ttacagaaaaaattgctgaat 255530
to top
>emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chromosome 1 Contains part of
             the DAB1 gene for disabled homolog 1 (Drosophila),
             complete sequence
          Length = 134011

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    tggtggaaatgctgttgtcat 111
             |||||||||||||||||||||
Sbjct: 15263 tggtggaaatgctgttgtcat 15283
to top
>gb|DQ068068.1| Uncultured bacterium BAC17H8, complete sequence
          Length = 135294

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 105  ttgtcatcggtggtggctacatagg 129
            ||||||||||||||||||| |||||
Sbjct: 4892 ttgtcatcggtggtggctatatagg 4868
to top
>gb|AC034187.6| Homo sapiens chromosome 3 clone RP11-202A21 map 3p, complete sequence
          Length = 171716

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 302   aaggactcaacagggaaggtg 322
             |||||||||||||||||||||
Sbjct: 58566 aaggactcaacagggaaggtg 58586
to top
>gb|AF176315.2|AF176315 Homo sapiens chromosome 3 clone RP11-83M12 map 3p, complete sequence
          Length = 170755

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 302    aaggactcaacagggaaggtg 322
              |||||||||||||||||||||
Sbjct: 147357 aaggactcaacagggaaggtg 147377
to top
>gb|AF025458.1| Caenorhabditis elegans cosmid C01B12, complete sequence
          Length = 22973

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   tcggctatttacagaaaaaa 224
             ||||||||||||||||||||
Sbjct: 10682 tcggctatttacagaaaaaa 10701
to top
>gb|AC160470.3| Mus musculus chromosome 3, clone RP24-74B11, complete sequence
          Length = 204941

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 212    tttacagaaaaaattgctgaatat 235
              |||||||||||||||| |||||||
Sbjct: 147414 tttacagaaaaaattgatgaatat 147391
to top
>gb|AC139213.11| Mus musculus chromosome 7, clone RP23-341H2, complete sequence
          Length = 189709

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    acatcatttgaaaaggactc 309
              ||||||||||||||||||||
Sbjct: 188005 acatcatttgaaaaggactc 187986
to top
>gb|AC122836.4| Mus musculus BAC clone RP23-188B13 from 7, complete sequence
          Length = 222390

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      aagtggttcggatgctgaaa 26
              ||||||||||||||||||||
Sbjct: 152050 aagtggttcggatgctgaaa 152069
to top
>gb|AC102076.9| Mus musculus chromosome 7, clone RP23-401P12, complete sequence
          Length = 199219

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      aagtggttcggatgctgaaa 26
              ||||||||||||||||||||
Sbjct: 137125 aagtggttcggatgctgaaa 137106
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 91     tggtggaaatgctgttgtcatcgg 114
              ||||||||||||||||||| ||||
Sbjct: 772618 tggtggaaatgctgttgtcctcgg 772641
to top
>gb|AC157607.4| Mus musculus chromosome 1, clone RP23-401G11, complete sequence
          Length = 200421

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 480    tgtatgctgttggtgatgtt 499
              ||||||||||||||||||||
Sbjct: 146986 tgtatgctgttggtgatgtt 147005
to top
>gb|AC010157.12| Homo sapiens chromosome 10 clone RP11-202D18, complete sequence
          Length = 160310

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   ttacagaaaaaattgctgaa 232
             ||||||||||||||||||||
Sbjct: 72602 ttacagaaaaaattgctgaa 72621
to top
>gb|AC016967.24| Homo sapiens 3 BAC RP11-72E23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 140971

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   ttacagaaaaaattgctgaa 232
             ||||||||||||||||||||
Sbjct: 40975 ttacagaaaaaattgctgaa 40994
to top
>gb|AC155944.3| Mus musculus 6 BAC RP24-493P12 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 137474

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   gaactgtgcttacatcattt 298
             ||||||||||||||||||||
Sbjct: 90838 gaactgtgcttacatcattt 90857
to top
>gb|AC099722.7| Mus musculus chromosome 3, clone RP23-282E13, complete sequence
          Length = 233425

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 212    tttacagaaaaaattgctgaatat 235
              |||||||||||||||| |||||||
Sbjct: 232334 tttacagaaaaaattgatgaatat 232357
to top
>dbj|AP001085.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-632K5, complete
              sequence
          Length = 175747

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    ggctatttacagaaaaaatt 226
              ||||||||||||||||||||
Sbjct: 170447 ggctatttacagaaaaaatt 170466
to top
>gb|AC152923.2| Mus musculus BAC clone RP24-267O6 from 5, complete sequence
          Length = 187438

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     ctgaaaacatatgttatttg 40
              ||||||||||||||||||||
Sbjct: 166258 ctgaaaacatatgttatttg 166277
to top
>gb|AC102340.10| Mus musculus chromosome 3, clone RP23-163J23, complete sequence
          Length = 199087

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 212   tttacagaaaaaattgctgaatat 235
             |||||||||||||||| |||||||
Sbjct: 95341 tttacagaaaaaattgatgaatat 95364
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 524     gacggcgatgtccgacggct 543
               ||||||||||||||||||||
Sbjct: 1448354 gacggcgatgtccgacggct 1448335


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,249,277
Number of Sequences: 3902068
Number of extensions: 5249277
Number of successful extensions: 101124
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100905
Number of HSP's gapped (non-prelim): 212
length of query: 568
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 545
effective length of database: 17,143,297,704
effective search space: 9343097248680
effective search space used: 9343097248680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top