ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal17c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-ass... 31 0.98
2LANC2_MOUSE (Q9JJK2) LanC-like protein 2 (Testis-specific adriam... 28 4.8

>RIMB1_HUMAN (O95153) Peripheral-type benzodiazepine receptor-associated protein|
           1 (PRAX-1) (Peripheral benzodiazepine
           receptor-interacting protein) (PBR-IP) (RIM-binding
           protein 1) (RIM-BP1)
          Length = 1857

 Score = 30.8 bits (68), Expect = 0.98
 Identities = 20/44 (45%), Positives = 25/44 (56%)
 Frame = -2

Query: 177 GPLHVVMHSLQHSRSSTIVLLMHMAV*CRDRVVPSDLLYHRADA 46
           GPLH+ + +L  SR S+  L   +AV  R  VVPS L  HR  A
Sbjct: 853 GPLHISVQALT-SRGSSDPLRCCLAVGARAGVVPSQLRVHRLTA 895



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>LANC2_MOUSE (Q9JJK2) LanC-like protein 2 (Testis-specific adriamycin|
           sensitivity protein)
          Length = 450

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
 Frame = -2

Query: 177 GPLHV---VMHSLQHSRSS----TIVLLMHMAV*CRDRVVPSDLLYHRA 52
           GPL V   + H L+    S    T +L MH  + C++  +P +LLY RA
Sbjct: 153 GPLAVGAVIYHKLKSECESQECITKLLQMHRTIVCQESELPDELLYGRA 201


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,934,587
Number of Sequences: 219361
Number of extensions: 543910
Number of successful extensions: 975
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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