>CSN12_KLULA (Q6CPB1) COP9 signalosome complex subunit 12|
          Length = 424

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
 Frame = -3

Query: 320 RFALQLHMFHG----NQAIGTKGLQNPFAYIHTYISLVYSYFIRSKIFVVLL 177
           RF   + +++G    N A+G K LQ  F     Y S+  +Y +RS++ + L+
Sbjct: 212 RFKFYMGLYYGYEKNNYALGFKWLQETFDICTLYESIPSTYKVRSQVLIYLI 263

>STO_ARATH (Q96288) Salt-tolerance protein|
          Length = 248

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +1

Query: 16  DDDDEDYLIVPDLG 57
           DDDDE++ IVPDLG
Sbjct: 235 DDDDEEHFIVPDLG 248

>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC|
           1.4.1.13) (Glutamate synthase alpha subunit)
           (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1517

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 293 HGNQAIGTKGLQNPFAYIHTYISLVYSYF 207
           +G +A+G+ G   PFA + +   ++Y YF
Sbjct: 509 NGQEAVGSMGDDTPFAVLSSQPRIIYDYF 537

>MSTAB_DROME (P83501) Protein msta, isoform B|
          Length = 448

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
 Frame = +2

Query: 182 ARQIFWNG*SMSKLVICMCVCMQRDS------AILLCRSLGCRG 295
           AR+IF     M+K  IC CV  Q  +      + L CR  GCRG
Sbjct: 281 ARKIFLG---MTKHFICKCVRCQDPTENGTYLSALFCREQGCRG 321

>PPNK_HELPY (O25944) Probable inorganic polyphosphate/ATP-NAD kinase (EC|
           2.7.1.23) (Poly(P)/ATP NAD kinase)
          Length = 284

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +3

Query: 249 KGILQSFCADRLVAVEHMKLQGESGKYFHKRDGFISVIYFVLXXKK 386
           K  LQ F  DR+   EH+ L+G  GK       F ++   V+  KK
Sbjct: 107 KDFLQDFKQDRIKLEEHLALEGRIGK-----TSFYAINEIVIAKKK 147

>NU5M_YARLI (Q9B6D3) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 655

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
 Frame = -3

Query: 359 YTDKPISFVKVFPRFA----LQLHMFHGNQAIGTKGLQNPFAYIHTYISLVYSYFIRSKI 192
           Y   P+  + +F  FA      +++  G   +GT  L N F+Y  T  S+   Y +   I
Sbjct: 457 YITLPMFILAIFAMFAGWILKDIYLGVGTDFVGTHILPNNFSYFDTEFSITQFYKLLPLI 516

Query: 191 FVVLL 177
             +L+
Sbjct: 517 SAILV 521


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,420,109
Number of Sequences: 219361
Number of extensions: 885818
Number of successful extensions: 2191
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2191
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)