Clone Name	baal17c11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	1072	0.0
2	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	1072	0.0
3	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	922	0.0
4	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	878	0.0
5	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	749	0.0
6	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	702	0.0
7	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	527	e-146
8	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	519	e-144
9	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	519	e-144
10	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	519	e-144
11	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	519	e-144
12	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	519	e-144
13	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	519	e-144
14	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	519	e-144
15	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	509	e-141
16	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	504	e-139
17	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	478	e-131
18	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	478	e-131
19	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	478	e-131
20	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	478	e-131
21	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	448	e-123
22	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	444	e-121
23	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	444	e-121
24	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	440	e-120
25	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	436	e-119
26	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	436	e-119
27	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	400	e-108
28	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	392	e-106
29	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	361	2e-96
30	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	349	6e-93
31	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	349	6e-93
32	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	349	6e-93
33	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	349	6e-93
34	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	349	6e-93
35	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	349	6e-93
36	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	349	6e-93
37	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	349	6e-93
38	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	349	6e-93
39	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	341	1e-90
40	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	341	1e-90
41	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	341	1e-90
42	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	331	1e-87
43	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	321	1e-84
44	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	317	2e-83
45	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	317	2e-83
46	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	313	3e-82
47	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	305	8e-80
48	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	303	3e-79
49	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	303	3e-79
50	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	303	3e-79
51	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	303	3e-79
52	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	303	3e-79
53	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	303	3e-79
54	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	303	3e-79
55	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	303	3e-79
56	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	297	2e-77
57	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	295	8e-77
58	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	295	8e-77
59	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	295	8e-77
60	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	295	8e-77
61	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	295	8e-77
62	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	295	8e-77
63	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	287	2e-74
64	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	274	3e-70
65	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	268	2e-68
66	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	244	3e-61
67	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	230	4e-57
68	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	222	1e-54
69	emb|Y10657.1|CLRCAGENE C.littorale rca gene	220	4e-54
70	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	218	1e-53
71	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	216	6e-53
72	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	214	2e-52
73	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	210	4e-51
74	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	206	6e-50
75	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	206	6e-50
76	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	198	1e-47
77	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	182	8e-43
78	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	178	1e-41
79	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	176	5e-41
80	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	170	3e-39
81	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	161	3e-36
82	emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat...	157	5e-35
83	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	143	7e-31
84	gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence	133	7e-28
85	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	123	7e-25
86	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	119	1e-23
87	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	117	4e-23
88	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	105	2e-19
89	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	92	2e-15
90	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	88	4e-14
91	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	68	3e-08
92	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	68	3e-08
93	gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic s...	68	3e-08
94	ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G7...	56	1e-04
95	gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	1e-04
96	gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	1e-04
97	emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co...	56	1e-04
98	dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ...	56	1e-04
99	gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N...	56	1e-04
100	emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co...	54	5e-04
101	emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom...	42	1.9
102	emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Co...	42	1.9
103	gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet...	40	7.6
104	emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding prot...	40	7.6
105	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	7.6
106	ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like f...	40	7.6
107	ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like f...	40	7.6
108	gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence	40	7.6
109	gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein p...	40	7.6
110	emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chr...	40	7.6

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 1072 bits (541), Expect = 0.0
 Identities = 553/557 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688  gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 747

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 807

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 867

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 927

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928  agggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 987

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 1047

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 1048 atcggtgtctgcaagggtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaag 1107

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 1167

                                                                        
Query: 482  tacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagagg 541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1168 tacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagagg 1227

                             
Query: 542  ctggtgaactcgcggga 558
            |||||||||||||||||
Sbjct: 1228 ctggtgaactcgcggga 1244

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 1072 bits (541), Expect = 0.0
 Identities = 553/557 (99%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 492

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 552

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 612

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 672

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 agggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 732

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 792

                                                                       
Query: 362 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
           ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 793 atcggtgtctgcaagggtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaag 852

                                                                       
Query: 422 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 912

                                                                       
Query: 482 tacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagagg 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 tacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagagg 972

                            
Query: 542 ctggtgaactcgcggga 558
           |||||||||||||||||
Sbjct: 973 ctggtgaactcgcggga 989

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  922 bits (465), Expect = 0.0
 Identities = 534/557 (95%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 608  gagctggagagtggcaacgccggagagccagccaagctcatcaggcagcggtaccgtgag 667

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 668  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgcc 727

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 728  ggtgcgggtaggatgggcgggaccacacagtacaccgtcaacaaccagatggtgaacgcc 787

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 788  accctcatgaacatcgccgatgcccccaccaatgtgcagctcccaggcatgtacaacaag 847

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| 
Sbjct: 848  gaggagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcc 907

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 908  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgt 967

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
            ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 968  atcggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaag 1027

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1028 atcgtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgtgctcgggtg 1087

                                                                        
Query: 482  tacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagagg 541
            |||||||| |||||||||||||||||   ||||||||| ||||||||||||||||||| |
Sbjct: 1088 tacgacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaag 1147

                             
Query: 542  ctggtgaactcgcggga 558
            |||||||||||||||||
Sbjct: 1148 ctggtgaactcgcggga 1164

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  878 bits (443), Expect = 0.0
 Identities = 449/451 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6430 gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 6489

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6490 gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 6549

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6550 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 6609

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6610 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 6669

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6670 agggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 6729

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6730 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 6789

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6790 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 6849

                                           
Query: 422  atcgtcgacaccttcccaggacaatccattg 452
            |||||||||||||||||||||||||||||||
Sbjct: 6850 atcgtcgacaccttcccaggacaatccattg 6880



 Score =  448 bits (226), Expect = e-123
 Identities = 421/486 (86%)
 Strand = Plus / Plus

                                                                        
Query: 26   gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 85
            ||||| |||||||| ||| ||||| ||||||| ||||| || ||||| ||||| ||||| 
Sbjct: 3327 gagccggccaagctgatccggcagaggtaccgcgaggcggccgacattatcaacaagggc 3386

                                                                        
Query: 86   aagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacc 145
            |||||||||||||||||||||||||| || ||||| || |||||  |||||||||| || 
Sbjct: 3387 aagatgtgctgcctcttcatcaacgacctggacgccggcgcgggccggatgggcgggacg 3446

                                                                        
Query: 146  acgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcc 205
            ||||||||||| || |||||||||||||||||||||||||||||||||||||| || || 
Sbjct: 3447 acgcagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgcggacgcg 3506

                                                                        
Query: 206  cccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 265
            |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 3507 cccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatc 3566

                                                                        
Query: 266  gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 325
             |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || |||
Sbjct: 3567 atcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatg 3626

                                                                        
Query: 326  gagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 385
            ||||||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||
Sbjct: 3627 gagaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttc 3686

                                                                        
Query: 386  cagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaa 445
            |  |||||||| |||   |||||| | || || | | | || ||||||||||| || || 
Sbjct: 3687 cgcaccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcag 3746

                                                                        
Query: 446  tccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 505
            ||||| ||||| ||||| || ||||| || |||||||||||||| |||||||||||||||
Sbjct: 3747 tccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgg 3806

                  
Query: 506  gtcggc 511
            ||||||
Sbjct: 3807 gtcggc 3812



 Score =  212 bits (107), Expect = 9e-52
 Identities = 107/107 (100%)
 Strand = Plus / Plus

                                                                        
Query: 452  gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080

                                                           
Query: 512  tctaccggaatcgagaacattggcaagaggctggtgaactcgcggga 558
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcggga 7127

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  749 bits (378), Expect = 0.0
 Identities = 512/557 (91%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 619  gagctggagagcggcaacgccggagagccagccaagctcatcaggcagcggtaccgcgag 678

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || |||||||||||||||||||| |||||||||||||||||||||||||| || ||||| 
Sbjct: 679  gccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaacgacctcgacgcc 738

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            || |||||| |||||||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 739  ggcgcgggtcggatgggcgggaccacccagtacaccgtgaacaaccagatggtgaacgcc 798

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            |||||||||||||||||||| || |||||||||||||||||||| || ||||||||||||
Sbjct: 799  accctgatgaacatcgccgacgcgcccaccaacgtgcagctcccggggatgtacaacaag 858

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||||||||||||||| |||||| |||||||||| ||||| ||||||||||| ||||| 
Sbjct: 859  gaggagaacccccgtgtccccatcatcgtcaccggcaacgacttctcgacgctgtacgcg 918

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || |||||||| |||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 919  cccctcatccgtgacggtcgtatggagaagttctactgggcgcccacccgcgaggaccgt 978

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
            ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 979  atcggcgtctgcaagggtatcttccagaccgacaacgtcagcgacgagtctgtcgtcaag 1038

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            ||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 1039 atcgtcgacacnttcccaggacagtccatcgacttcttcggtgctctgcgtgctcgggtg 1098

                                                                        
Query: 482  tacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagagg 541
            ||||||| ||||||||||||||||||    || |||||||| |||||||| |||||||||
Sbjct: 1099 tacgacgttgaggtgcgcaagtgggtgtcgtccaccggaattgagaacatcggcaagagg 1158

                             
Query: 542  ctggtgaactcgcggga 558
            |||||||||||||||||
Sbjct: 1159 ctggtgaactcgcggga 1175

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  702 bits (354), Expect = 0.0
 Identities = 506/557 (90%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 629  gagctggagagcggcaacgccggagagccagccaagctcatcaggcagcggtaccgcgag 688

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || |||||||||||||||||||| |||||||||||||||||||||||||| || ||||| 
Sbjct: 689  gccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaacgacctcgacgcc 748

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            || |||||| |||||||||| ||||| ||||||||||| |||||||||||||||||||||
Sbjct: 749  ggcgcgggtcggatgggcgggaccacccagtacaccgtgaacaaccagatggtgaacgcc 808

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            |||||||||||||||||||| || ||||||||||||||||| || || ||||||||||||
Sbjct: 809  accctgatgaacatcgccgacgcgcccaccaacgtgcagcttccggggatgtacaacaag 868

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||||||||||||||| |||||  | |||||||| ||||| || |||||||| ||||| 
Sbjct: 869  gaggagaacccccgtgttcccattatngtcaccggcaacgacttttcgacgctgtacgcc 928

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || || | ||| ||||||||||||||||| |||||||| |||||||| || ||||||
Sbjct: 929  ccccttattcctgacggtcgtatggagaagttttactgggcgcccacccgcgaggaccgt 988

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
            ||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 989  atcggcgtctgcaagggtatcttccagaccgacaacgtcagcgacgagtctgtcgtcaag 1048

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 1049 atcgtcgacaccttcccaggacagtccatcgacttcttcggtgctctgcgtgctcgggtg 1108

                                                                        
Query: 482  tacgacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagagg 541
            |||||||| |||||||||||||||||    || |||||||| |||||||| |||||||||
Sbjct: 1109 tacgacgacgaggtgcgcaagtgggtgtcgtccaccggaattgagaacatcggcaagagg 1168

                             
Query: 542  ctggtgaactcgcggga 558
            |||||||||||||||||
Sbjct: 1169 ctggtgaactcgcggga 1185

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  527 bits (266), Expect = e-146
 Identities = 446/506 (88%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 612  gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 671

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 672  gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 731

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 732  ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 791

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||||||||||||||||||   ||| |||||||||||||||||||| ||||||||||||
Sbjct: 792  accctgatgaacatcgccgacaacccaaccaacgtgcagctccctgggatgtacaacaag 851

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 852  gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 911

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 912  ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 971

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
             |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 972  gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 1031

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || 
Sbjct: 1032 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1091

                                      
Query: 482  tacgacgatgaggtgcgcaagtgggt 507
            |||||||| |||||||||||||||||
Sbjct: 1092 tacgacgacgaggtgcgcaagtgggt 1117



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 524  gagaacattggcaagaggctggtgaactcgcggga 558
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1134 gagaacattggcaagaggctggtgaactcgaggga 1168

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  519 bits (262), Expect = e-144
 Identities = 445/506 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 576  gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 635

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 636  gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 695

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 696  ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 755

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||||||||||||||||||   ||| ||||||||||||||||| || ||||||||||||
Sbjct: 756  accctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaag 815

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 816  gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 875

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 876  ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 935

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
             |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 936  gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 995

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || 
Sbjct: 996  atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1055

                                      
Query: 482  tacgacgatgaggtgcgcaagtgggt 507
            |||||||| |||||||||||||||||
Sbjct: 1056 tacgacgacgaggtgcgcaagtgggt 1081



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 524  gagaacattggcaagaggctggtgaactcgcggga 558
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1098 gagaacattggcaagaggctggtgaactcgaggga 1132

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  519 bits (262), Expect = e-144
 Identities = 445/506 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 624  gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 683

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 684  gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 743

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 744  ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 803

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||||||||||||||||||   ||| ||||||||||||||||| || ||||||||||||
Sbjct: 804  accctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaag 863

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 864  gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 923

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 924  ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 983

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
             |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 984  gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 1043

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || 
Sbjct: 1044 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1103

                                      
Query: 482  tacgacgatgaggtgcgcaagtgggt 507
            |||||||| |||||||||||||||||
Sbjct: 1104 tacgacgacgaggtgcgcaagtgggt 1129



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 524  gagaacattggcaagaggctggtgaactcgcggga 558
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1146 gagaacattggcaagaggctggtgaactcgaggga 1180

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  519 bits (262), Expect = e-144
 Identities = 445/506 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 575  gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 634

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 635  gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 694

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 695  ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 754

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||||||||||||||||||   ||| ||||||||||||||||| || ||||||||||||
Sbjct: 755  accctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaag 814

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 815  gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 874

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 875  ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 934

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
             |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 935  gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 994

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || 
Sbjct: 995  atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1054

                                      
Query: 482  tacgacgatgaggtgcgcaagtgggt 507
            |||||||| |||||||||||||||||
Sbjct: 1055 tacgacgacgaggtgcgcaagtgggt 1080



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 524  gagaacattggcaagaggctggtgaactcgcggga 558
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1097 gagaacattggcaagaggctggtgaactcgaggga 1131

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  519 bits (262), Expect = e-144
 Identities = 445/506 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 613  gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 672

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 673  gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 732

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 733  ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 792

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||||||||||||||||||   ||| ||||||||||||||||| || ||||||||||||
Sbjct: 793  accctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaag 852

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 853  gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 912

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 913  ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 972

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
             |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 973  gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 1032

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || 
Sbjct: 1033 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1092

                                      
Query: 482  tacgacgatgaggtgcgcaagtgggt 507
            |||||||| |||||||||||||||||
Sbjct: 1093 tacgacgacgaggtgcgcaagtgggt 1118



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 524  gagaacattggcaagaggctggtgaactcgcggga 558
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1135 gagaacattggcaagaggctggtgaactcgaggga 1169

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  519 bits (262), Expect = e-144
 Identities = 445/506 (87%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 396 gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 455

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 456 gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 515

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 516 ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 575

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||| ||||||||||||||||| || ||||||||||||
Sbjct: 576 accctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaag 635

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 636 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 695

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 696 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 755

                                                                       
Query: 362 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
            |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 756 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 815

                                                                       
Query: 422 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
           |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || 
Sbjct: 816 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 875

                                     
Query: 482 tacgacgatgaggtgcgcaagtgggt 507
           |||||||| |||||||||||||||||
Sbjct: 876 tacgacgacgaggtgcgcaagtgggt 901



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 524 gagaacattggcaagaggctggtgaactcgcggga 558
           |||||||||||||||||||||||||||||| ||||
Sbjct: 918 gagaacattggcaagaggctggtgaactcgaggga 952

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  519 bits (262), Expect = e-144
 Identities = 445/506 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 617  gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 676

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 677  gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 736

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 737  ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 796

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||||||||||||||||||   ||| ||||||||||||||||| || ||||||||||||
Sbjct: 797  accctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaag 856

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 857  gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 916

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 917  ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 976

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
             |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 977  gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 1036

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || 
Sbjct: 1037 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1096

                                      
Query: 482  tacgacgatgaggtgcgcaagtgggt 507
            |||||||| |||||||||||||||||
Sbjct: 1097 tacgacgacgaggtgcgcaagtgggt 1122



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 524  gagaacattggcaagaggctggtgaactcgcggga 558
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1139 gagaacattggcaagaggctggtgaactcgaggga 1173

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  519 bits (262), Expect = e-144
 Identities = 445/506 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 611  gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 670

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 671  gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 730

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 731  ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 790

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||||||||||||||||||   ||| ||||||||||||||||| || ||||||||||||
Sbjct: 791  accctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaag 850

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 851  gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 910

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 911  ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 970

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
             |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 971  gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 1030

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||||| ||||||||| |||||||| || || ||||| ||||| ||||| || || 
Sbjct: 1031 atcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgtgcccgtgtt 1090

                                      
Query: 482  tacgacgatgaggtgcgcaagtgggt 507
            |||||||| |||||||||||||||||
Sbjct: 1091 tacgacgacgaggtgcgcaagtgggt 1116



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 524  gagaacattggcaagaggctggtgaactcgcggga 558
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1133 gagaacattggcaagaggctggtgaactcgaggga 1167

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  509 bits (257), Expect = e-141
 Identities = 428/485 (88%)
 Strand = Plus / Plus

                                                                        
Query: 23   ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 82
            |||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 602  ggagagccggccaagctgatcaggcagcggtaccgtgaggcggcagacatcatcaagaag 661

                                                                        
Query: 83   ggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcgga 142
            || ||||||||||||||||||||||||||||| ||||| ||||| ||| | ||||| || 
Sbjct: 662  gggaagatgtgctgcctcttcatcaacgatctggacgcgggtgcaggtcgcatgggaggc 721

                                                                        
Query: 143  accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 202
            ||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 722  accacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgac 781

                                                                        
Query: 203  gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 262
              ||| ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||
Sbjct: 782  aacccaaccaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtcccc 841

                                                                        
Query: 263  atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 322
            ||| |||||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||
Sbjct: 842  atcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgt 901

                                                                        
Query: 323  atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 382
            ||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||
Sbjct: 902  atggagaagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatc 961

                                                                        
Query: 383  ttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccagga 442
            ||||  |||||||| |||   ||||||    |||||||||||||||||| ||||||||| 
Sbjct: 962  ttccgcaccgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggc 1021

                                                                        
Query: 443  caatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaag 502
            |||||||| || || ||||| ||||| ||||| || || |||||||| ||||||||||||
Sbjct: 1022 caatccatcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaag 1081

                 
Query: 503  tgggt 507
            |||||
Sbjct: 1082 tgggt 1086



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 524  gagaacattggcaagaggctggtgaactcgcggga 558
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1103 gagaacattggcaagaggctggtgaactcgaggga 1137

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  504 bits (254), Expect = e-139
 Identities = 299/314 (95%)
 Strand = Plus / Plus

                                                                       
Query: 245 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 304
           |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 1   gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60

                                                                       
Query: 305 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 120

                                                                       
Query: 365 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 424
           |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 121 ggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatc 180

                                                                       
Query: 425 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 484
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtac 240

                                                                       
Query: 485 gacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctg 544
           ||||| |||||||||||||||||   ||||||||| ||||||||||||||||||| ||||
Sbjct: 241 gacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctg 300

                         
Query: 545 gtgaactcgcggga 558
           ||||||||||||||
Sbjct: 301 gtgaactcgcggga 314

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  478 bits (241), Expect = e-131
 Identities = 397/449 (88%)
 Strand = Plus / Minus

                                                                          
Query: 2      gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
              ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 109136 gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 109077

                                                                          
Query: 62     gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
              || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 109076 gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 109017

                                                                          
Query: 122    ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
              ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 109016 ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 108957

                                                                          
Query: 182    accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
              ||||||||||||||||||||   ||| ||||||||||||||||| || ||||||||||||
Sbjct: 108956 accctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaag 108897

                                                                          
Query: 242    gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
              ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 108896 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 108837

                                                                          
Query: 302    cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
              || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 108836 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 108777

                                                                          
Query: 362    atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
               |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 108776 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 108717

                                           
Query: 422    atcgtcgacaccttcccaggacaatccat 450
              |||||||||| ||||||||| ||||||||
Sbjct: 108716 atcgtcgacagcttcccaggccaatccat 108688



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                          
Query: 136    gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 195
              |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 112679 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 112620

                                                         
Query: 196    cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 238
              ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 112619 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 112577



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                          
Query: 23     ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 82
              |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 112778 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 112719

                                                    
Query: 83     ggtaagatgtgctgcctcttcatcaacgatcttgacgc 120
              || |||||||||   || ||||||||||| || |||||
Sbjct: 112718 gggaagatgtgcgtgctgttcatcaacgacctggacgc 112681



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 524    gagaacattggcaagaggctggtgaactcgcggga 558
              |||||||||||||||||||||||||||||| ||||
Sbjct: 108522 gagaacattggcaagaggctggtgaactcgaggga 108488



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                          
Query: 323    atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 382
              ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460

                  
Query: 383    ttcc 386
              ||||
Sbjct: 112459 ttcc 112456



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 458    ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 507
              ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 524    gagaacattggcaagaggctggtgaactc 552
              |||||||| |||| |||||||||||||||
Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  478 bits (241), Expect = e-131
 Identities = 397/449 (88%)
 Strand = Plus / Minus

                                                                         
Query: 2     gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
             ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 31013 gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 30954

                                                                         
Query: 62    gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
             || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 30953 gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 30894

                                                                         
Query: 122   ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
             ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 30893 ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 30834

                                                                         
Query: 182   accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
             ||||||||||||||||||||   ||| ||||||||||||||||| || ||||||||||||
Sbjct: 30833 accctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaag 30774

                                                                         
Query: 242   gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
             ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 30773 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 30714

                                                                         
Query: 302   cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
             || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 30713 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 30654

                                                                         
Query: 362   atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
              |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 30653 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 30594

                                          
Query: 422   atcgtcgacaccttcccaggacaatccat 450
             |||||||||| ||||||||| ||||||||
Sbjct: 30593 atcgtcgacagcttcccaggccaatccat 30565



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                         
Query: 136   gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 195
             |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 34556 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 34497

                                                        
Query: 196   cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 238
             ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 34496 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 34454



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                         
Query: 23    ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 82
             |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 34655 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 34596

                                                   
Query: 83    ggtaagatgtgctgcctcttcatcaacgatcttgacgc 120
             || |||||||||   || ||||||||||| || |||||
Sbjct: 34595 gggaagatgtgcgtgctgttcatcaacgacctggacgc 34558



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                
Query: 524   gagaacattggcaagaggctggtgaactcgcggga 558
             |||||||||||||||||||||||||||||| ||||
Sbjct: 30399 gagaacattggcaagaggctggtgaactcgaggga 30365



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 323   atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 382
             ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337

                 
Query: 383   ttcc 386
             ||||
Sbjct: 34336 ttcc 34333



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 458   ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 507
             ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 524   gagaacattggcaagaggctggtgaactc 552
             |||||||| |||| |||||||||||||||
Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  478 bits (241), Expect = e-131
 Identities = 397/449 (88%)
 Strand = Plus / Minus

                                                                            
Query: 2        gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
                ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 28304275 gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 28304216

                                                                            
Query: 62       gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
                || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 28304215 gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 28304156

                                                                            
Query: 122      ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
                ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 28304155 ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 28304096

                                                                            
Query: 182      accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
                ||||||||||||||||||||   ||| ||||||||||||||||| || ||||||||||||
Sbjct: 28304095 accctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaag 28304036

                                                                            
Query: 242      gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
                ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 28304035 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 28303976

                                                                            
Query: 302      cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
                || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 28303975 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 28303916

                                                                            
Query: 362      atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
                 |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 28303915 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 28303856

                                             
Query: 422      atcgtcgacaccttcccaggacaatccat 450
                |||||||||| ||||||||| ||||||||
Sbjct: 28303855 atcgtcgacagcttcccaggccaatccat 28303827



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 136      gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 195
                |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 28307818 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28307759

                                                           
Query: 196      cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 238
                ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28307758 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28307716



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                            
Query: 23       ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 82
                |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 28307917 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28307858

                                                      
Query: 83       ggtaagatgtgctgcctcttcatcaacgatcttgacgc 120
                || |||||||||   || ||||||||||| || |||||
Sbjct: 28307857 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28307820



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 524      gagaacattggcaagaggctggtgaactcgcggga 558
                |||||||||||||||||||||||||||||| ||||
Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgaggga 28303627



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 323      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 382
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599

                    
Query: 383      ttcc 386
                ||||
Sbjct: 28307598 ttcc 28307595



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 458      ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 507
                ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 524      gagaacattggcaagaggctggtgaactc 552
                |||||||| |||| |||||||||||||||
Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  478 bits (241), Expect = e-131
 Identities = 397/449 (88%)
 Strand = Plus / Minus

                                                                            
Query: 2        gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
                ||||||||||| || ||||| |||||||| || ||||| |||||||||||||||||||||
Sbjct: 28286724 gagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggtaccgtgag 28286665

                                                                            
Query: 62       gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
                || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 28286664 gcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatctggacgcg 28286605

                                                                            
Query: 122      ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
                ||||| ||| | ||||| || ||||| |||||||| || |||||||||||||||||||||
Sbjct: 28286604 ggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaaccagatggtgaacgcc 28286545

                                                                            
Query: 182      accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
                ||||||||||||||||||||   ||| ||||||||||||||||| || ||||||||||||
Sbjct: 28286544 accctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatgtacaacaag 28286485

                                                                            
Query: 242      gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
                ||||| ||||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 28286484 gaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacgctgtacgcg 28286425

                                                                            
Query: 302      cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
                || || |||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 28286424 ccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgcgacgaccgt 28286365

                                                                            
Query: 362      atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
                 |||| |||||||||||||||||||  |||||||| |||   ||||||    ||||||||
Sbjct: 28286364 gtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggacatcgtcaag 28286305

                                             
Query: 422      atcgtcgacaccttcccaggacaatccat 450
                |||||||||| ||||||||| ||||||||
Sbjct: 28286304 atcgtcgacagcttcccaggccaatccat 28286276



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 136      gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 195
                |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 28290267 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28290208

                                                           
Query: 196      cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 238
                ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28290207 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28290165



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                            
Query: 23       ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 82
                |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 28290366 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28290307

                                                      
Query: 83       ggtaagatgtgctgcctcttcatcaacgatcttgacgc 120
                || |||||||||   || ||||||||||| || |||||
Sbjct: 28290306 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28290269



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 524      gagaacattggcaagaggctggtgaactcgcggga 558
                |||||||||||||||||||||||||||||| ||||
Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgaggga 28286076



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 323      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 382
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048

                    
Query: 383      ttcc 386
                ||||
Sbjct: 28290047 ttcc 28290044



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 458      ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 507
                ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 28286176 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 524      gagaacattggcaagaggctggtgaactc 552
                |||||||| |||| |||||||||||||||
Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  448 bits (226), Expect = e-123
 Identities = 421/486 (86%)
 Strand = Plus / Plus

                                                                        
Query: 26   gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 85
            ||||| |||||||| ||| ||||| ||||||| ||||| || ||||| ||||| ||||| 
Sbjct: 758  gagccggccaagctgatccggcagaggtaccgcgaggcggccgacattatcaacaagggc 817

                                                                        
Query: 86   aagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaacc 145
            |||||||||||||||||||||||||| || ||||| || |||||  |||||||||| || 
Sbjct: 818  aagatgtgctgcctcttcatcaacgacctggacgccggcgcgggccggatgggcgggacg 877

                                                                        
Query: 146  acgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcc 205
            ||||||||||| || |||||||||||||||||||||||||||||||||||||| || || 
Sbjct: 878  acgcagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgcggacgcg 937

                                                                        
Query: 206  cccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatc 265
            |||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||
Sbjct: 938  cccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatc 997

                                                                        
Query: 266  gtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatg 325
             |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || |||
Sbjct: 998  atcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatg 1057

                                                                        
Query: 326  gagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 385
            ||||||||||||||||| |||||||| || ||||| ||||| || |||||||| ||||||
Sbjct: 1058 gagaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttc 1117

                                                                        
Query: 386  cagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaa 445
            |  |||||||| |||   |||||| | || || | | | || ||||||||||| || || 
Sbjct: 1118 cgcaccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcag 1177

                                                                        
Query: 446  tccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 505
            ||||| ||||| ||||| || ||||| || |||||||||||||| |||||||||||||||
Sbjct: 1178 tccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgg 1237

                  
Query: 506  gtcggc 511
            ||||||
Sbjct: 1238 gtcggc 1243

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  444 bits (224), Expect = e-121
 Identities = 434/504 (86%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||||||||| || ||||| |||||||| || ||||| ||| |||||||||||||||||
Sbjct: 270 gagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtgag 329

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||||| |||| |||||| ||||||||||||||||||||||||||||| || || 
Sbjct: 330 gccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatgcc 389

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           ||||| ||  |||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 390 ggtgccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacgcc 449

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||| ||||||||||||||   |||||||||||| |||||||| |||||||||||||||
Sbjct: 450 accctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaacaag 509

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| 
Sbjct: 510 caggagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgcc 569

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| ||||||||||||||||||||||||||||||||| | || ||||| 
Sbjct: 570 cccctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccgg 629

                                                                       
Query: 362 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
            |||| |||||||  |||||||||  | ||||||| |||    | |||  |||| |||||
Sbjct: 630 gtcggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaag 689

                                                                       
Query: 422 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||||||||||| || |||||||||||||| |||||||| ||| | ||  |||| 
Sbjct: 690 ctcgtcgacaccttccccggccaatccattgacttcttcggtgcactgagggcgagggtc 749

                                   
Query: 482 tacgacgatgaggtgcgcaagtgg 505
           |||||||| |||||| | ||||||
Sbjct: 750 tacgacgacgaggtgaggaagtgg 773



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 533 ggcaagaggctggtgaactcgc 554
           ||||||||||||||||||||||
Sbjct: 801 ggcaagaggctggtgaactcgc 822

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  444 bits (224), Expect = e-121
 Identities = 434/504 (86%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||||||||| || ||||| |||||||| || ||||| ||| |||||||||||||||||
Sbjct: 464 gagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtgag 523

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||||| |||| |||||| ||||||||||||||||||||||||||||| || || 
Sbjct: 524 gccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatgcc 583

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           ||||| ||  |||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 584 ggtgccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacgcc 643

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||| ||||||||||||||   |||||||||||| |||||||| |||||||||||||||
Sbjct: 644 accctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaacaag 703

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| 
Sbjct: 704 caggagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgcc 763

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| ||||||||||||||||||||||||||||||||| | || ||||| 
Sbjct: 764 cccctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccgg 823

                                                                       
Query: 362 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
            |||| |||||||  |||||||||  | ||||||| |||    | |||  |||| |||||
Sbjct: 824 gtcggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaag 883

                                                                       
Query: 422 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||||||||||| || |||||||||||||| |||||||| ||| | ||  |||| 
Sbjct: 884 ctcgtcgacaccttccccggccaatccattgacttcttcggtgcactgagggcgagggtc 943

                                   
Query: 482 tacgacgatgaggtgcgcaagtgg 505
           |||||||| |||||| | ||||||
Sbjct: 944 tacgacgacgaggtgaggaagtgg 967



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 533  ggcaagaggctggtgaactcgc 554
            ||||||||||||||||||||||
Sbjct: 995  ggcaagaggctggtgaactcgc 1016

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  440 bits (222), Expect = e-120
 Identities = 438/510 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| || ||||| |||||||| ||| ||||| ||||||| |||
Sbjct: 584  gagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggtaccgcgag 643

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            ||||| ||||| ||||||||||| |||||||||||||||||||||||||| || ||||| 
Sbjct: 644  gctgccgacattatcaagaagggcaagatgtgctgcctcttcatcaacgacctggacgcc 703

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            || |||||  |||||||||| || ||||||||||| || |||||||||||||||||||||
Sbjct: 704  ggcgcggggcggatgggcgggacgacgcagtacacggtgaacaaccagatggtgaacgcc 763

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||||||||||||||| || || ||||||||||||||| |||| || ||||||||||||
Sbjct: 764  accctgatgaacatcgcggacgcgcccaccaacgtgcagttcccggggatgtacaacaag 823

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||||||||| || ||||||||| |||||||||| ||||| ||||||||||| ||||| 
Sbjct: 824  gaggagaacccacgcgtgcccatcatcgtcaccggcaacgacttctcgacgctgtacgcg 883

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || ||||| || || || |||||||||||||||||||| |||||||| || ||||| 
Sbjct: 884  cccctcatccgggacggccgcatggagaagttctactgggcgcccacccgggaggaccgc 943

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
            ||||| || |||||||| |||||||  |||||||| |||   |||||| | || || | |
Sbjct: 944  atcggcgtgtgcaagggcatcttccgcaccgacaacgtccccgacgaggccgtggtgagg 1003

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
             | || ||||||||||| || || ||||| ||||| ||||| || ||||| || ||||||
Sbjct: 1004 ctggtggacaccttcccggggcagtccatcgacttcttcggcgcgctgcgggcgcgggtg 1063

                                          
Query: 482  tacgacgatgaggtgcgcaagtgggtcggc 511
            |||||||| |||||||||||||||||||||
Sbjct: 1064 tacgacgacgaggtgcgcaagtgggtcggc 1093

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  436 bits (220), Expect = e-119
 Identities = 433/504 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| |||||||| || ||||| ||| |||||||||||||||||
Sbjct: 571  gagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtgag 630

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || ||||| |||| |||||| ||||||||||||||||||||||||||||| || || 
Sbjct: 631  gccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatgcc 690

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||| ||  |||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 691  ggtgccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacgcc 750

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||| ||||||||||||||   |||||||||||| |||||||| |||||||||||||||
Sbjct: 751  accctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaacaag 810

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
             | ||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| 
Sbjct: 811  caagagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgcc 870

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || |||||||| ||||||||||||||||||||||||||||||||| | || ||||| 
Sbjct: 871  cccctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccgg 930

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
             |||| |||||||  |||||||||  | ||||||| |||    | |||  |||| |||||
Sbjct: 931  gtcggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaag 990

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
             |||||||||||||||| || |||||||||||||| |||||||| ||| | ||  |||| 
Sbjct: 991  ctcgtcgacaccttccccggccaatccattgacttcttcggtgcactgagggcgagggtc 1050

                                    
Query: 482  tacgacgatgaggtgcgcaagtgg 505
            |||||||| |||||| | ||||||
Sbjct: 1051 tacgacgacgaggtgaggaagtgg 1074

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  436 bits (220), Expect = e-119
 Identities = 433/504 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||||||||| || ||||| |||||||| || ||||| ||| |||||||||||||||||
Sbjct: 434 gagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgtgag 493

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||||| |||| |||||| ||||||||||||||||||||||||||||| || || 
Sbjct: 494 gccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatctcgatgcc 553

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           ||||| ||  |||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 554 ggtgccggccggatgggcggcaccacccagtacaccgtcaacaaccagatggtgaacgcc 613

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||| ||||||||||||||   |||||||||||| |||||||| |||||||||||||||
Sbjct: 614 accctcatgaacatcgccgacaaccccaccaacgtccagctccccggcatgtacaacaag 673

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            | ||||||||||| ||||||||| |||||||||| ||||| ||||| || |||||||| 
Sbjct: 674 caagagaacccccgcgtgcccatcatcgtcaccggcaacgacttctccaccctctacgcc 733

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| ||||||||||||||||||||||||||||||||| | || ||||| 
Sbjct: 734 cccctcatccgtgacggtcgtatggagaagttctactgggctcccaccagggatgaccgg 793

                                                                       
Query: 362 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
            |||| |||||||  |||||||||  | ||||||| |||    | |||  |||| |||||
Sbjct: 794 gtcggcgtctgcaccggtatcttcaggtccgacaacgtccccaaggaggatgtcatcaag 853

                                                                       
Query: 422 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||||||||||| || |||||||||||||| |||||||| ||| | ||  |||| 
Sbjct: 854 ctcgtcgacaccttccccggccaatccattgacttcttcggtgcactgagggcgagggtc 913

                                   
Query: 482 tacgacgatgaggtgcgcaagtgg 505
           |||||||| |||||| | ||||||
Sbjct: 914 tacgacgacgaggtgaggaagtgg 937

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  400 bits (202), Expect = e-108
 Identities = 421/494 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||||||||| || ||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 190 gagctggagagcggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgag 249

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           ||  | ||| | ||||||||||| ||||||| ||||||||||||||||||  | ||||| 
Sbjct: 250 gcctccgacctcatcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgcc 309

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || |||||| | |||||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct: 310 ggcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccagatggtcaacgcc 369

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||||||||
Sbjct: 370 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacaacaag 429

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           ||||| |||||||| ||||||||| |||||||||| ||||| ||||| ||||||||||| 
Sbjct: 430 gaggacaacccccgcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcg 489

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || ||||| || || || |||||||||||||||||||| |||||||| || ||||| 
Sbjct: 490 ccgctcatccgcgacggccgcatggagaagttctactgggcgcccacccgcgaggaccgc 549

                                                                       
Query: 362 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
           ||||| ||||||||||| |||||||  ||||||   |||   || |||   |||||| ||
Sbjct: 550 atcggcgtctgcaagggcatcttccgcaccgacggcgtcgacgaggagcacgtcgtccag 609

                                                                       
Query: 422 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            | |||||||||||||| || || ||||| ||||| ||||| || |||||||| ||||| 
Sbjct: 610 ctggtcgacaccttccctggccagtccatcgacttcttcggcgcgctgcgtgcccgggtc 669

                         
Query: 482 tacgacgatgaggt 495
           |||||||| |||||
Sbjct: 670 tacgacgacgaggt 683

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  392 bits (198), Expect = e-106
 Identities = 420/494 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||||||||| || ||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 585  gagctggagagcggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgag 644

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            ||  | ||| | ||||||||||| ||||||| ||||||||||||||||||  | ||||| 
Sbjct: 645  gcctccgacctcatcaagaagggcaagatgtcctgcctcttcatcaacgacttggacgcc 704

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            || |||||| | |||||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct: 705  ggcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccagatggtcaacgcc 764

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||||||||||||||||||   ||||||||||||||||||||| || ||||||||||||
Sbjct: 765  accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacaacaag 824

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            ||||| |||||||| ||||||||| |||||||||| ||||| ||||| ||||||||||| 
Sbjct: 825  gaggacaacccccgcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcg 884

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || ||||| || || || |||||||||||||||||||| |||||||| || ||||| 
Sbjct: 885  ccgctcatccgcgacggccgcatggagaagttctactgggcgcccacccgcgaggaccgc 944

                                                                        
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
            ||||| ||||||||||| |||||||  ||||||   |||   || |||   |||||| ||
Sbjct: 945  atcggcgtctgcaagggcatcttccgcaccgacggcgtcgacgaggagcacgtcgtccag 1004

                                                                        
Query: 422  atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
             | |||||||||||||| || || ||||| || || ||||| || |||||||| ||||| 
Sbjct: 1005 ctggtcgacaccttccctggccagtccatcgatttcttcggcgcgctgcgtgcccgggtc 1064

                          
Query: 482  tacgacgatgaggt 495
            |||||||| |||||
Sbjct: 1065 tacgacgacgaggt 1078

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  361 bits (182), Expect = 2e-96
 Identities = 333/385 (86%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||||||||| || ||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct: 585 gagctggagagcggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgag 644

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           ||  | ||| | ||||||||||| ||||||||||||||||||||||||||  | ||||| 
Sbjct: 645 gcctccgacctcatcaagaagggcaagatgtgctgcctcttcatcaacgacttggacgcc 704

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || |||||| | |||||||| ||||| |||||||| || |||||||||||||| ||||||
Sbjct: 705 ggcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccagatggtcaacgcc 764

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||||||||
Sbjct: 765 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacaacaag 824

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           ||||| ||     | ||||||||| |||||||||| ||||| ||||| ||||||||||| 
Sbjct: 825 gaggacaannnnngcgtgcccatcatcgtcaccggcaacgacttctccacgctctacgcg 884

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || ||||| || || || |||||||||||||||||||| |||||||| || ||||| 
Sbjct: 885 ccgctcatccgcgacggccgcatggagaagttctactgggcgcccacccgcgaggaccgc 944

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| ||||||||||| |||||||
Sbjct: 945 atcggcgtctgcaagggcatcttcc 969

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  349 bits (176), Expect = 6e-93
 Identities = 332/384 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 751  gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 810

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || ||| ||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 811  gcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgct 870

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| 
Sbjct: 871  ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgca 930

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            || || |||||||| || |||  ||| |||||||| |||||||| || ||||||||||||
Sbjct: 931  acactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaag 990

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 991  gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 1050

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 1051 cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 1110

                                    
Query: 362  atcggtgtctgcaagggtatcttc 385
            ||||||||||||||||||||||||
Sbjct: 1111 atcggtgtctgcaagggtatcttc 1134

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  349 bits (176), Expect = 6e-93
 Identities = 332/384 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 751  gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 810

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || ||| ||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 811  gcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgct 870

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| 
Sbjct: 871  ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgca 930

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            || || |||||||| || |||  ||| |||||||| |||||||| || ||||||||||||
Sbjct: 931  acactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaag 990

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 991  gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 1050

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 1051 cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 1110

                                    
Query: 362  atcggtgtctgcaagggtatcttc 385
            ||||||||||||||||||||||||
Sbjct: 1111 atcggtgtctgcaagggtatcttc 1134

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  349 bits (176), Expect = 6e-93
 Identities = 332/384 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 780  gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 839

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || ||| ||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 840  gcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgct 899

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| 
Sbjct: 900  ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgca 959

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            || || |||||||| || |||  ||| |||||||| |||||||| || ||||||||||||
Sbjct: 960  acactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaag 1019

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 1020 gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 1079

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 1080 cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 1139

                                    
Query: 362  atcggtgtctgcaagggtatcttc 385
            ||||||||||||||||||||||||
Sbjct: 1140 atcggtgtctgcaagggtatcttc 1163

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  349 bits (176), Expect = 6e-93
 Identities = 332/384 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 662  gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 721

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || ||| ||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 722  gcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgct 781

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| 
Sbjct: 782  ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgca 841

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            || || |||||||| || |||  ||| |||||||| |||||||| || ||||||||||||
Sbjct: 842  acactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaag 901

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 902  gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 961

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 962  cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 1021

                                    
Query: 362  atcggtgtctgcaagggtatcttc 385
            ||||||||||||||||||||||||
Sbjct: 1022 atcggtgtctgcaagggtatcttc 1045

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  349 bits (176), Expect = 6e-93
 Identities = 332/384 (86%)
 Strand = Plus / Minus

                                                                         
Query: 2     gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
             ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 14537 gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 14478

                                                                         
Query: 62    gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
             || || ||| ||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 14477 gcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgct 14418

                                                                         
Query: 122   ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
             ||||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| 
Sbjct: 14417 ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgca 14358

                                                                         
Query: 182   accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
             || || |||||||| || |||  ||| |||||||| |||||||| || ||||||||||||
Sbjct: 14357 acactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaag 14298

                                                                         
Query: 242   gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
             || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 14297 gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 14238

                                                                         
Query: 302   cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
             ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 14237 cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 14178

                                     
Query: 362   atcggtgtctgcaagggtatcttc 385
             ||||||||||||||||||||||||
Sbjct: 14177 atcggtgtctgcaagggtatcttc 14154

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  349 bits (176), Expect = 6e-93
 Identities = 332/384 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 665  gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 724

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || ||| ||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 725  gcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgct 784

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| 
Sbjct: 785  ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgca 844

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            || || |||||||| || |||  ||| |||||||| |||||||| || ||||||||||||
Sbjct: 845  acactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaag 904

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 905  gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 964

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 965  cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 1024

                                    
Query: 362  atcggtgtctgcaagggtatcttc 385
            ||||||||||||||||||||||||
Sbjct: 1025 atcggtgtctgcaagggtatcttc 1048

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  349 bits (176), Expect = 6e-93
 Identities = 332/384 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 662  gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 721

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || ||| ||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 722  gcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgct 781

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| 
Sbjct: 782  ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgca 841

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            || || |||||||| || |||  ||| |||||||| |||||||| || ||||||||||||
Sbjct: 842  acactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaag 901

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 902  gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 961

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 962  cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 1021

                                    
Query: 362  atcggtgtctgcaagggtatcttc 385
            ||||||||||||||||||||||||
Sbjct: 1022 atcggtgtctgcaagggtatcttc 1045

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  349 bits (176), Expect = 6e-93
 Identities = 332/384 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 665  gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 724

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || ||| ||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 725  gcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgct 784

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| 
Sbjct: 785  ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgca 844

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            || || |||||||| || |||  ||| |||||||| |||||||| || ||||||||||||
Sbjct: 845  acactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaag 904

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 905  gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 964

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 965  cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 1024

                                    
Query: 362  atcggtgtctgcaagggtatcttc 385
            ||||||||||||||||||||||||
Sbjct: 1025 atcggtgtctgcaagggtatcttc 1048

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  349 bits (176), Expect = 6e-93
 Identities = 332/384 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 2746 gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 2805

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || ||| ||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 2806 gcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgct 2865

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| 
Sbjct: 2866 ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgca 2925

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            || || |||||||| || |||  ||| |||||||| |||||||| || ||||||||||||
Sbjct: 2926 acactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaag 2985

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 2986 gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 3045

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 3046 cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 3105

                                    
Query: 362  atcggtgtctgcaagggtatcttc 385
            ||||||||||||||||||||||||
Sbjct: 3106 atcggtgtctgcaagggtatcttc 3129

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  341 bits (172), Expect = 1e-90
 Identities = 331/384 (86%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 577 gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 636

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| ||||||||||||| |||||||| || ||| ||||||||||||||||||||
Sbjct: 637 gcagctgacttgatcaagaagggaaagatgtgttgtctcctcatcaacgatcttgacgct 696

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           ||||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| 
Sbjct: 697 ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgca 756

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           || || |||||||| || |||  ||| |||||||| |||||||| || ||||||||||||
Sbjct: 757 acactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaag 816

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 817 gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 876

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 877 cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 936

                                   
Query: 362 atcggtgtctgcaagggtatcttc 385
           ||||||||||||||||||||||||
Sbjct: 937 atcggtgtctgcaagggtatcttc 960

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  341 bits (172), Expect = 1e-90
 Identities = 331/384 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 654  gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 713

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || ||| ||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 714  gcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgct 773

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||| | ||||| || || || |||||||| ||||||||||||||||| ||||| 
Sbjct: 774  ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccagatggttaacgca 833

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            || || |||||||| || |||  ||| |||||||| ||||| || || ||||||||||||
Sbjct: 834  acactcatgaacattgctgataacccaaccaacgtccagcttccaggaatgtacaacaag 893

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 894  gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 953

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 954  cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 1013

                                    
Query: 362  atcggtgtctgcaagggtatcttc 385
            ||||||||||||||||||||||||
Sbjct: 1014 atcggtgtctgcaagggtatcttc 1037

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  341 bits (172), Expect = 1e-90
 Identities = 331/384 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            ||||| |||||||| ||||| ||||| || || ||||| ||| | ||| |||||||||||
Sbjct: 780  gagcttgagagtggaaacgcaggagaacccgcaaagcttatccgtcagaggtaccgtgag 839

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || ||| ||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct: 840  gcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacgatcttgacgct 899

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||||||| | ||||| || || || |||||||| |||||||| |||||||| ||||| 
Sbjct: 900  ggtgcgggtcgtatgggtggtactactcagtacactgtcaacaatcagatggttaacgca 959

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            || || |||||||| || |||  ||| |||||||| |||||||| || ||||||||||||
Sbjct: 960  acactcatgaacattgctgataacccaaccaacgtccagctcccaggaatgtacaacaag 1019

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||| | ||||| |||||| |   ||| |||||||||||||| || || ||||||
Sbjct: 1020 gaagagaacgcacgtgtccccatcatttgcactggtaacgatttctccaccctatacgct 1079

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| ||||||||||| ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 1080 cctctcatccgtgatggacgtatggagaagttctactgggccccgacccgtgaagaccgt 1139

                                    
Query: 362  atcggtgtctgcaagggtatcttc 385
            ||||||||||||||||||||||||
Sbjct: 1140 atcggtgtctgcaagggtatcttc 1163

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  331 bits (167), Expect = 1e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                       
Query: 173 gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 232
           |||||||||||||||||||||||||||||   ||| ||||||||||||||||| || |||
Sbjct: 1   gtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatg 60

                                                                       
Query: 233 tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 292
           |||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| |||
Sbjct: 61  tacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacg 120

                                                                       
Query: 293 ctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgt 352
           || ||||| || || |||||||| || |||||||||||||||||||||||||||||||| 
Sbjct: 121 ctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgc 180

                                                                       
Query: 353 gacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtct 412
           ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||   
Sbjct: 181 gacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggac 240

                                                                       
Query: 413 gtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgt 472
            |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| |||
Sbjct: 241 atcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgt 300

                                              
Query: 473 gctcgggtgtacgacgatgaggtgcgcaagtgggt 507
           || || || |||||||| |||||||||||||||||
Sbjct: 301 gcccgtgtttacgacgacgaggtgcgcaagtgggt 335



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 524 gagaacattggcaagaggctggtgaactcgcggga 558
           |||||||||||||||||||||||||||||| ||||
Sbjct: 352 gagaacattggcaagaggctggtgaactcgaggga 386

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  321 bits (162), Expect = 1e-84
 Identities = 339/398 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            |||||||| ||||| || || ||||| || |||||||| ||||||||  |||||||||| 
Sbjct: 646  gagctggaaagtggaaatgcaggagaacctgccaagctgatcaggcaaaggtaccgtgaa 705

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            ||||| ||||| |||||||||||||| ||||||||||| |||||||||||||| ||||||
Sbjct: 706  gctgctgacattatcaagaagggtaaaatgtgctgcctgttcatcaacgatctcgacgct 765

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            || || ||| | ||||| ||||| || || ||||| || ||||||||||||||||| |||
Sbjct: 766  ggagctggtcgtatgggtggaacaactcaatacactgttaacaaccagatggtgaatgcc 825

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||| |||||||| || ||   ||| || || || ||||||||||| ||||||||||||
Sbjct: 826  accctcatgaacattgctgacaacccaacaaatgtccagctccctggtatgtacaacaag 885

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||||| |||||||| ||| | ||||| |||||||| ||||||||  | ||||||
Sbjct: 886  gaagagaaccctcgtgtgcctatcattgtcactggtaacgacttctcgacattgtacgct 945

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| |||||||||||||||||||| || |||||||||||||| ||| | || ||||||
Sbjct: 946  cctcttatccgtgatggtcgtatggaaaaattctactgggctcctaccagggaagaccgt 1005

                                                  
Query: 362  atcggtgtctgcaagggtatcttccagaccgacaatgt 399
            || ||||||||||||||||| |||  ||| ||||||||
Sbjct: 1006 attggtgtctgcaagggtattttcaggactgacaatgt 1043

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  317 bits (160), Expect = 2e-83
 Identities = 406/488 (83%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 131 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 190

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||  |||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 191 gccgcggacctgatctcgaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 250

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 251 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 310

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 311 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 370

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 371 gtggacaacccgcgtgtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcg 430

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || || || || || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 431 ccgctcattcgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 490

                                                                       
Query: 362 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
           ||||| || |||||||| |||||||  ||||||   |||   ||||||   |||||| ||
Sbjct: 491 atcggcgtgtgcaagggcatcttccgcaccgacggcgtccccgacgagcacgtcgtccag 550

                                                                       
Query: 422 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||| ||||||| || || ||||| ||||| ||||| || || || || ||||||
Sbjct: 551 ctcgtcgacgccttcccgggccagtccatcgacttcttcggcgccctccgcgcccgggtg 610

                   
Query: 482 tacgacga 489
           ||||||||
Sbjct: 611 tacgacga 618

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  317 bits (160), Expect = 2e-83
 Identities = 406/488 (83%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 139 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 198

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||  |||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 199 gcggcggacctgatctcgaagggcaagatgtcctgcctgttcatcaacgatctggacgcc 258

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 259 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 318

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 319 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 378

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| ||||||||||||||||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 379 gtggacaacccgcgtgtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcg 438

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || ||||| || || || ||||| |||||||||||||| |||||||| || ||||| 
Sbjct: 439 ccgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgggaggaccgc 498

                                                                       
Query: 362 atcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaag 421
           ||||| || |||||||| |||||||  ||||||   |||   ||||||   |||||| ||
Sbjct: 499 atcggcgtgtgcaagggcatcttccgcaccgacggcgtccccgacgagcacgtcgtccag 558

                                                                       
Query: 422 atcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtg 481
            |||||||| ||||||| || || ||||| ||||| ||||| || || || || ||||||
Sbjct: 559 ctcgtcgacgccttcccgggccagtccatcgacttcttcggcgccctccgcgcccgggtg 618

                   
Query: 482 tacgacga 489
           ||||||||
Sbjct: 619 tacgacga 626

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score =  313 bits (158), Expect = 3e-82
 Identities = 335/394 (85%)
 Strand = Plus / Plus

                                                                        
Query: 6    tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 65
            |||| ||||||||||| ||||| ||||||||| | ||||||||  ||||||||||||| |
Sbjct: 650  tggaaagtgggaacgccggagaaccagccaagttgatcaggcaaaggtaccgtgaggccg 709

                                                                        
Query: 66   cagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtg 125
            | ||||| |||||||| || || ||||| |||||||| ||||||||||| |||||||| |
Sbjct: 710  ccgacattatcaagaaagggaaaatgtgttgcctctttatcaacgatctcgacgctggag 769

                                                                        
Query: 126  cgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccc 185
            | ||| | ||||| |||||||| || ||||| || |||||||| |||||||||||||| |
Sbjct: 770  ccggtcgtatgggaggaaccacacaatacacagtgaacaaccaaatggtgaacgccacac 829

                                                                        
Query: 186  tgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagg 245
            | ||||||||||| |||  |||||||||||| |||||||| || |||||||||||||| |
Sbjct: 830  tcatgaacatcgctgataaccccaccaacgttcagctccccggtatgtacaacaaggaag 889

                                                                        
Query: 246  agaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctc 305
            ||||||| ||||| || ||| | |||||||||||||||||||||||||| ||||| || |
Sbjct: 890  agaaccctcgtgttccgatcattgtcaccggtaacgatttctcgacgctgtacgcgccgc 949

                                                                        
Query: 306  tgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcg 365
            | |||||||| ||||||||||||||||| |||||||| |||||| | || ||  | ||||
Sbjct: 950  tcatccgtgacggtcgtatggagaagttttactgggcacccaccagggaagataggatcg 1009

                                              
Query: 366  gtgtctgcaagggtatcttccagaccgacaatgt 399
            |||| ||||  ||||| |||  ||||||||||||
Sbjct: 1010 gtgtttgcacaggtattttcaggaccgacaatgt 1043



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                      
Query: 428  gacaccttcccaggacaatccattgactttttcggtgctctg 469
            ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  305 bits (154), Expect = 8e-80
 Identities = 331/390 (84%)
 Strand = Plus / Plus

                                                                       
Query: 5   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 64
           ||||| ||||| ||||| || || ||||||||| | ||||||||  |||||||||| |||
Sbjct: 463 ctggaaagtggaaacgccggtgaaccagccaagttgatcaggcaaaggtaccgtgaagct 522

                                                                       
Query: 65  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 124
           || ||||| ||||| ||||| || ||||||  ||||||||| |||||||| || ||||||
Sbjct: 523 gccgacataatcaaaaagggcaaaatgtgcgccctcttcattaacgatctcgatgctggt 582

                                                                       
Query: 125 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 184
           || ||| | ||||| |||||||| || ||||||||||||||||||||||| || || |||
Sbjct: 583 gccggtcgtatgggaggaaccacccaatacaccgtcaacaaccagatggttaatgctacc 642

                                                                       
Query: 185 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 244
           || |||||||||||||||  |||||||||||| |||||||| || |||||||||||||| 
Sbjct: 643 ctcatgaacatcgccgataaccccaccaacgtccagctccccggtatgtacaacaaggaa 702

                                                                       
Query: 245 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 304
           |||||||||||||| |||||  ||||||| |||||||||||||| || || || ||||||
Sbjct: 703 gagaacccccgtgtccccattatcgtcactggtaacgatttctccacactgtatgctcct 762

                                                                       
Query: 305 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 364
           || |||||||| |||||||||||||| || |||||||| || ||  | ||||||||| ||
Sbjct: 763 ctcatccgtgacggtcgtatggagaaattttactgggcaccaactagggacgaccgtgtc 822

                                         
Query: 365 ggtgtctgcaagggtatcttccagaccgac 394
           ||||| ||||| ||||| |||  |||||||
Sbjct: 823 ggtgtttgcaaaggtattttcaggaccgac 852



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 423 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 482
           |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940

               
Query: 483 acga 486
           ||||
Sbjct: 941 acga 944

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  303 bits (153), Expect = 3e-79
 Identities = 327/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 145 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 204

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 205 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 264

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 265 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 324

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 325 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 384

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 385 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 444

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 445 ccgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 504

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 505 atcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  303 bits (153), Expect = 3e-79
 Identities = 327/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 147 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 206

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 207 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 266

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 267 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 326

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 327 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 386

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 387 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 446

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 447 ccgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 506

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 507 atcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  303 bits (153), Expect = 3e-79
 Identities = 327/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 151 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 210

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 211 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 270

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 271 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 330

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 331 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 390

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 391 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 450

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 451 ccgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 510

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 511 atcggcgtgtgcaagggcatcttcc 535

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  303 bits (153), Expect = 3e-79
 Identities = 327/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 147 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 206

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 207 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 266

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 267 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 326

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 327 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 386

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 387 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 446

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 447 ccgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 506

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 507 atcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  303 bits (153), Expect = 3e-79
 Identities = 327/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 147 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 206

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 207 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 266

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 267 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 326

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 327 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 386

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 387 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 446

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 447 ccgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 506

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 507 atcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  303 bits (153), Expect = 3e-79
 Identities = 327/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 147 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 206

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 207 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 266

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 267 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 326

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 327 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 386

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 387 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 446

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 447 ccgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 506

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 507 atcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  303 bits (153), Expect = 3e-79
 Identities = 327/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 147 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 206

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 207 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 266

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 267 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 326

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 327 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 386

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 387 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 446

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 447 ccgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 506

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 507 atcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  303 bits (153), Expect = 3e-79
 Identities = 327/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 149 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 208

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 209 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 268

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 269 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 328

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 329 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 388

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 389 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 448

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || |||||||| || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 449 ccgctcatccgtgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 508

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 509 atcggcgtgtgcaagggcatcttcc 533

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  297 bits (150), Expect = 2e-77
 Identities = 330/390 (84%)
 Strand = Plus / Plus

                                                                       
Query: 5   ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 64
           ||||| ||||| ||||| || || ||||||||| | ||||||||  |||||||||| || 
Sbjct: 464 ctggaaagtggaaacgccggtgaaccagccaagttgatcaggcaaaggtaccgtgaagcc 523

                                                                       
Query: 65  gcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggt 124
           || ||||| ||||| ||||| || ||||||  | | ||||| || ||||| || ||||||
Sbjct: 524 gccgacataatcaaaaagggcaaaatgtgcgccttgttcattaatgatctcgatgctggt 583

                                                                       
Query: 125 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 184
           || ||| | ||||| |||||||| || ||||||||||||||||||||||| ||||| |||
Sbjct: 584 gccggtcgtatgggaggaaccacccaatacaccgtcaacaaccagatggttaacgctacc 643

                                                                       
Query: 185 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 244
           || |||||||||||||||  |||||||||||| |||||||| || |||||||||||||| 
Sbjct: 644 ctcatgaacatcgccgataaccccaccaacgtccagctccccggtatgtacaacaaggaa 703

                                                                       
Query: 245 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 304
           |||||||||||||| |||||| ||||||| |||||||||||||| || || || ||||||
Sbjct: 704 gagaacccccgtgtccccatcatcgtcactggtaacgatttctccacactgtatgctcct 763

                                                                       
Query: 305 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 364
           || |||||||| |||||||||||||| || |||||||| || ||  | ||||||||||||
Sbjct: 764 ctcatccgtgacggtcgtatggagaaattttactgggcaccaactagggacgaccgtatc 823

                                         
Query: 365 ggtgtctgcaagggtatcttccagaccgac 394
           ||||| ||||| ||||| |||  |||||||
Sbjct: 824 ggtgtttgcaaaggtattttcaggaccgac 853



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 423 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 482
           |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941

               
Query: 483 acga 486
           ||||
Sbjct: 942 acga 945

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  295 bits (149), Expect = 8e-77
 Identities = 326/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 149 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 208

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 209 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 268

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 269 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 328

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 329 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 388

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 389 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 448

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 449 ccgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 508

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 509 atcggcgtgtgcaagggcatcttcc 533

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  295 bits (149), Expect = 8e-77
 Identities = 326/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 147 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 206

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 207 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 266

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 267 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 326

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 327 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 386

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 387 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 446

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 447 ccgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 506

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 507 atcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  295 bits (149), Expect = 8e-77
 Identities = 326/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 145 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 204

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 205 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 264

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 265 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 324

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 325 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 384

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 385 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 444

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 445 ccgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 504

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 505 atcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  295 bits (149), Expect = 8e-77
 Identities = 326/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 145 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 204

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 205 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 264

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 265 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 324

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 325 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 384

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 385 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 444

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 445 ccgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 504

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 505 atcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  295 bits (149), Expect = 8e-77
 Identities = 326/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 147 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 206

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 207 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 266

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 267 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 326

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 327 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 386

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 387 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 446

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 447 ccgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 506

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 507 atcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  295 bits (149), Expect = 8e-77
 Identities = 326/385 (84%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| ||||| || ||||| || ||||| || ||||| ||| | ||||| |||||||||
Sbjct: 151 gagctagagagcggcaacgccggtgagccggcgaagctgatccgtcagcgctaccgtgag 210

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           || || ||| |||||   ||||| ||||||| |||||| |||||||||||||| ||||| 
Sbjct: 211 gccgcggacctgatctccaagggcaagatgtcctgcctgttcatcaacgatctcgacgcc 270

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||  | |||||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 271 ggcgcaggccgcatgggcggcaccacccagtacacggtgaacaaccagatggtgaacgcc 330

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           ||||||||||||||||||||   ||||||||||||||||||||| || ||||||| ||||
Sbjct: 331 accctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaag 390

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           | ||| ||||| |||||||||||| |||||||||| ||||| ||||| ||||| ||||| 
Sbjct: 391 gtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcg 450

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           || || ||||| || || || ||||| |||||||||||||| |||||||| |||||||| 
Sbjct: 451 ccgctcatccgcgacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgc 510

                                    
Query: 362 atcggtgtctgcaagggtatcttcc 386
           ||||| || |||||||| |||||||
Sbjct: 511 atcggcgtgtgcaagggcatcttcc 535

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  287 bits (145), Expect = 2e-74
 Identities = 384/461 (83%), Gaps = 2/461 (0%)
 Strand = Plus / Plus

                                                                        
Query: 6    tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 65
            |||| ||||| ||||| ||||||||||| ||| | ||||||||  ||||||||||||| |
Sbjct: 705  tggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggtaccgtgaggcag 764

                                                                        
Query: 66   cagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctggt 124
            ||||||| ||    ||||| |||||||| ||| || |||||||||||||| ||||| |||
Sbjct: 765  cagacataattgccaagggaaagatgtg-tgctctgttcatcaacgatctcgacgcgggt 823

                                                                        
Query: 125  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 184
            || ||  | ||||| || ||||| || |||||||| |||||||||||||| |||||||||
Sbjct: 824  gctggacgtatgggaggcaccacacaatacaccgtgaacaaccagatggttaacgccacc 883

                                                                        
Query: 185  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 244
            || |||||||| || ||   ||||||||| || || |||||||| |||||||||||| | 
Sbjct: 884  ctcatgaacattgctgacaaccccaccaatgtccaactccctggtatgtacaacaagcaa 943

                                                                        
Query: 245  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 304
            |||||| ||||||| |||||  ||||||| |||||||| ||||| ||  | |||||||| 
Sbjct: 944  gagaacgcccgtgttcccattatcgtcactggtaacgacttctccaccttgtacgctccc 1003

                                                                        
Query: 305  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 364
            || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1004 cttatccgtgatggtcgtatggagaagttctactgggctcccacccgtgaggaccgtatc 1063

                                                                        
Query: 365  ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 424
            |||||   ||  |||||||||  ||||||||||||   ||| ||    || |||||| ||
Sbjct: 1064 ggtgttgccaccggtatcttcaggaccgacaatgttcctgaggaccacgttgtcaagctc 1123

                                                     
Query: 425  gtcgacaccttcccaggacaatccattgactttttcggtgc 465
            |||||||||||||| || ||||| ||||| || ||||||||
Sbjct: 1124 gtcgacaccttccctggccaatctattgatttcttcggtgc 1164

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  274 bits (138), Expect = 3e-70
 Identities = 314/370 (84%), Gaps = 2/370 (0%)
 Strand = Plus / Plus

                                                                        
Query: 6    tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 65
            |||| ||||| ||||| ||||| || || ||||| ||||||||  |||||||||| || |
Sbjct: 666  tggaaagtggaaacgcaggagaacccgcgaagctgatcaggcaaaggtaccgtgaagcag 725

                                                                        
Query: 66   cagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctggt 124
            | ||||| |||| ||||||||| ||||| ||| |||||||||||||||||||| || || 
Sbjct: 726  ccgacattatcaggaagggtaaaatgtg-tgcactcttcatcaacgatcttgatgcagga 784

                                                                        
Query: 125  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 184
            || ||| || | || |||||||| || ||||| ||||||||||| |||||||| ||||||
Sbjct: 785  gctggtcggcttggtggaaccacccaatacactgtcaacaaccaaatggtgaatgccacc 844

                                                                        
Query: 185  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 244
            || |||||||| || |||  ||| || ||||| ||||| || || |||||||||||||||
Sbjct: 845  ctcatgaacattgctgataacccgacaaacgtccagcttccaggtatgtacaacaaggag 904

                                                                        
Query: 245  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 304
            |||||||||||||| || ||| | |||||||||||||||||||| ||  | |||||||||
Sbjct: 905  gagaacccccgtgtcccaatcattgtcaccggtaacgatttctcaacattgtacgctcct 964

                                                                        
Query: 305  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 364
            || |||||||| ||||||||||||||||||||||||||||||||||| || || ||||| 
Sbjct: 965  ctcatccgtgacggtcgtatggagaagttctactgggctcccacccgcgaagatcgtatt 1024

                      
Query: 365  ggtgtctgca 374
            || |||||||
Sbjct: 1025 ggagtctgca 1034



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                        
Query: 428  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 487
            |||||||||||||| ||||| ||||| || || |||||  || | ||| |||| ||||||
Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147

                              
Query: 488  gatgaggtgcgcaagtgg 505
            ||||| ||| | ||||||
Sbjct: 1148 gatgaagtgaggaagtgg 1165

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  268 bits (135), Expect = 2e-68
 Identities = 284/331 (85%), Gaps = 2/331 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  ggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatga 74
           ||||||||| ||||||||| ||||||||||| ||||| ||||||||||| || || || |
Sbjct: 91  ggaacgctg-agagccagctaagctcatcagacagcg-taccgtgaggcagccgatatca 148

                                                                       
Query: 75  tcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtagga 134
           ||||||||||||| ||||||||| | ||||||||||||||||| |||||||| ||||| |
Sbjct: 149 tcaagaagggtaaaatgtgctgcttgttcatcaacgatcttgatgctggtgcaggtagaa 208

                                                                       
Query: 135 tgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaaca 194
           |||| ||||| || || ||||| |||||||| |||||||| || || || || |||||||
Sbjct: 209 tgggaggaactacacaatacacagtcaacaatcagatggttaatgctacactcatgaaca 268

                                                                       
Query: 195 tcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaaccccc 254
           | || |||  ||| ||||| || || |||||||| |||||| ||||||||||||||||||
Sbjct: 269 ttgctgataacccaaccaatgtccaactccctggaatgtacgacaaggaggagaaccccc 328

                                                                       
Query: 255 gtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtg 314
           ||||||||||| ||||||| || |||||||||||  | || || ||||| || ||||| |
Sbjct: 329 gtgtgcccatcatcgtcacaggaaacgatttctcagcactatatgctccccttatccgcg 388

                                          
Query: 315 atggtcgtatggagaagttctactgggctcc 345
           ||||||||||||| |||||||||||||||||
Sbjct: 389 atggtcgtatggaaaagttctactgggctcc 419

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  244 bits (123), Expect = 3e-61
 Identities = 288/341 (84%), Gaps = 4/341 (1%)
 Strand = Plus / Plus

                                                                        
Query: 34   caagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtg 93
            |||||| ||| | ||| ||||||||||||| || ||| ||||||||||||| ||||||||
Sbjct: 678  caagcttatccgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtg 737

                                                                        
Query: 94   ctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagta 153
             || ||||||||||||||||||||||||||||||||| | ||||| || || || |||||
Sbjct: 738  ttgtctcttcatcaacgatcttgacgctggtgcgggtcgtatgggtggtactactcagta 797

                                                                        
Query: 154  caccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaa 213
            ||| ||||||||||||||||| ||||| || || |||||||| || |||  ||| |||||
Sbjct: 798  cactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataacccaaccaa 857

                                                                        
Query: 214  cgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcac 273
            ||| |||||||| || |||||||||||||| |||||| | ||||| |||||| |   |||
Sbjct: 858  cgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcac 917

                                                                        
Query: 274  cggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagtt 333
             |||||||||||||| ||  | |||| |||||| |||| |||||| ||||||||||||||
Sbjct: 918  tggtaacgatttctccaccttatacggtcctctcatccttgatggacgtatggagaagtt 977

                                                     
Query: 334  ct--actgggctcccacccgtgacgaccgtatcggtgtctg 372
            ||  |||||   || |||||||| |||||||||||||||||
Sbjct: 978  cttgactgg--cccgacccgtgaagaccgtatcggtgtctg 1016

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  230 bits (116), Expect = 4e-57
 Identities = 307/368 (83%), Gaps = 2/368 (0%)
 Strand = Plus / Plus

                                                                        
Query: 6    tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 65
            |||| ||||| || || ||||||||||| ||| | ||||||||  ||||||||||||| |
Sbjct: 2447 tggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtaccgtgaggcag 2506

                                                                        
Query: 66   cagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctggt 124
            ||||| ||||    |||||||||||||| ||| || |||||||||||||| ||  | |||
Sbjct: 2507 cagacttgattgctaagggtaagatgtg-tgctctattcatcaacgatctggaacccggt 2565

                                                                        
Query: 125  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 184
            || ||  | ||||| || ||||| || |||||||| |||||||||||||| |||||||| 
Sbjct: 2566 gctggacgtatgggaggcaccacccaatacaccgtaaacaaccagatggttaacgccaca 2625

                                                                        
Query: 185  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 244
            || |||||||| || ||   ||| ||||| || || |||||||| |||||||||||| ||
Sbjct: 2626 ctcatgaacattgctgacaacccaaccaatgtccaactccctggtatgtacaacaagcag 2685

                                                                        
Query: 245  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 304
            || ||  ||||||| |||||| | || || |||||||||||||| ||  | |||||||| 
Sbjct: 2686 gacaatgcccgtgtccccatcattgttactggtaacgatttctccaccttgtacgctccc 2745

                                                                        
Query: 305  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 364
            || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 2746 cttatccgtgatggtcgtatggagaagttctactgggctcccacccgtgaggaccgtatt 2805

                    
Query: 365  ggtgtctg 372
            ||||||||
Sbjct: 2806 ggtgtctg 2813

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  222 bits (112), Expect = 1e-54
 Identities = 306/368 (83%), Gaps = 2/368 (0%)
 Strand = Plus / Plus

                                                                        
Query: 6    tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 65
            |||| ||||| || || ||||||||||| ||| | ||||||||  ||||||||||||| |
Sbjct: 819  tggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtaccgtgaggcag 878

                                                                        
Query: 66   cagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctggt 124
            ||||| ||||    |||||||||||||| ||| || |||||||||||||| ||  | |||
Sbjct: 879  cagacttgattgctaagggtaagatgtg-tgctctattcatcaacgatctggaacccggt 937

                                                                        
Query: 125  gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 184
            || ||  | ||||| || ||||| || |||||||| |||||||||||||| |||||||| 
Sbjct: 938  gctggacgtatgggaggcaccacccaatacaccgtaaacaaccagatggttaacgccaca 997

                                                                        
Query: 185  ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 244
            ||  ||||||| || ||   ||| ||||| || || |||||||| |||||||||||| ||
Sbjct: 998  ctcctgaacattgctgacaacccaaccaatgtccaactccctggtatgtacaacaagcag 1057

                                                                        
Query: 245  gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 304
            || ||  ||||||| |||||| | || || |||||||||||||| ||  | |||||||| 
Sbjct: 1058 gacaatgcccgtgtccccatcattgttactggtaacgatttctccaccttgtacgctccc 1117

                                                                        
Query: 305  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 364
            || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 1118 cttatccgtgatggtcgtatggagaagttctactgggctcccacccgtgaggaccgtatt 1177

                    
Query: 365  ggtgtctg 372
            ||||||||
Sbjct: 1178 ggtgtctg 1185



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                        
Query: 423  tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 482
            |||| ||| ||||||| |||||||| || ||||||||||| ||  || | ||||| || |
Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295

                      
Query: 483  acgacgatga 492
            ||||||||||
Sbjct: 1296 acgacgatga 1305

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score =  220 bits (111), Expect = 4e-54
 Identities = 318/387 (82%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            |||||||||  ||| ||||| || ||||| |||||||||||| | ||||| ||||| |||
Sbjct: 1475 gagctggagtctggtaacgccggtgagcccgccaagctcatccgccagcgctaccgcgag 1534

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            ||| | ||||   | |||||||| |||||||||| |||||||||||||||||| ||||||
Sbjct: 1535 gcttccgacagcgtgaagaagggcaagatgtgctccctcttcatcaacgatctggacgct 1594

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            ||||| ||  | ||||||     ||| |||||||| ||||||||||||||||| ||||| 
Sbjct: 1595 ggtgctggccgcatgggcatgggcacccagtacactgtcaacaaccagatggtcaacgct 1654

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||| ||||||||||| |||  ||| |||||||||||||| || ||| |||||||  ||
Sbjct: 1655 accctcatgaacatcgctgataaccctaccaacgtgcagctgcccggcgtgtacaaggag 1714

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            | | |||  |||||||| ||||| |||  ||| |||||||||||||| || || ||||| 
Sbjct: 1715 gtgcagattccccgtgttcccattgtctgcacgggtaacgatttctccaccctgtacgcc 1774

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            || || |||||||| || || |||||||||| |||||||   ||||||||||| ||||| 
Sbjct: 1775 cccctcatccgtgacggccgcatggagaagtactactggaaccccacccgtgaggaccgc 1834

                                       
Query: 362  atcggtgtctgcaagggtatcttccag 388
            ||||| ||||||| ||| |||||||||
Sbjct: 1835 atcggcgtctgcatgggaatcttccag 1861

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  218 bits (110), Expect = 1e-53
 Identities = 308/374 (82%)
 Strand = Plus / Plus

                                                                        
Query: 2    gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
            |||||||| ||||| || || |||||||| || ||||| ||||||||  |||| ||||| 
Sbjct: 646  gagctggaaagtggaaatgcaggagagcccgcaaagctgatcaggcaaaggtatcgtgaa 705

                                                                        
Query: 62   gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
            || || || || ||||||||||| || ||||||||||| || ||||||||||| || || 
Sbjct: 706  gcagctgatatcatcaagaagggaaaaatgtgctgcctgtttatcaacgatctcgatgcc 765

                                                                        
Query: 122  ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
            || || ||| | ||||| ||||| || || ||||| || ||||| ||||||||||| |||
Sbjct: 766  ggagctggtcgtatgggtggaacaactcaatacactgttaacaatcagatggtgaatgcc 825

                                                                        
Query: 182  accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
            ||||| |||||||| || ||   ||| || || || ||||| ||||||||||||||||||
Sbjct: 826  accctcatgaacatagctgacaacccaacaaatgtccagcttcctggcatgtacaacaag 885

                                                                        
Query: 242  gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
            || |||||||| ||||| |||||| | ||||| |||||||| ||||| ||  | || || 
Sbjct: 886  gaagagaaccctcgtgttcccatcattgtcactggtaacgacttctcaacattgtatgcc 945

                                                                        
Query: 302  cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
            ||||| ||||||||||| ||||||||||| ||||||||||| |||||| | || ||||||
Sbjct: 946  cctcttatccgtgatggccgtatggagaaattctactgggcacccaccagggaggaccgt 1005

                          
Query: 362  atcggtgtctgcaa 375
            || |||||||||||
Sbjct: 1006 attggtgtctgcaa 1019

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  216 bits (109), Expect = 6e-53
 Identities = 307/373 (82%)
 Strand = Plus / Plus

                                                                       
Query: 2   gagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgag 61
           ||||| || ||||| || || ||||||||||| ||  | ||||| ||| | |||||||| 
Sbjct: 84  gagcttgaaagtggaaatgcaggagagccagcaaaattgatcagacagagataccgtgaa 143

                                                                       
Query: 62  gctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgct 121
           ||  | ||||| |||| ||| || |||||||| || || |||||||||||||| || || 
Sbjct: 144 gcctctgacattatcaggaaaggaaagatgtgttgtctgttcatcaacgatctcgatgca 203

                                                                       
Query: 122 ggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgcc 181
           || || ||| | ||||| |||||||| || ||||| ||||||||||| |||||||| |||
Sbjct: 204 ggagcaggtcgtatgggtggaaccacacaatacactgtcaacaaccaaatggtgaatgcc 263

                                                                       
Query: 182 accctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaag 241
           || || |||||||| || |||  ||||||||| || || |||||||| ||||||||||||
Sbjct: 264 acactcatgaacattgctgataaccccaccaatgtccaactccctggtatgtacaacaag 323

                                                                       
Query: 242 gaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgct 301
           || || ||  | |||||||||||| | ||||||||||| |||||||| || || || |||
Sbjct: 324 gaagacaatgctcgtgtgcccatcattgtcaccggtaatgatttctcaacactttatgct 383

                                                                       
Query: 302 cctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgt 361
           ||||| |||||||||||||||||||||||||||||||||||||| ||  | || || |||
Sbjct: 384 cctctcatccgtgatggtcgtatggagaagttctactgggctcctactagagaagatcgt 443

                        
Query: 362 atcggtgtctgca 374
           || ||||||||||
Sbjct: 444 attggtgtctgca 456



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 416 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 475
           |||||||| || ||||||||||| || |||||||| || || ||||||||  || | |||
Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557

                                           
Query: 476 cgggtgtacgacgatgaggtgcgcaagtgggt 507
            | |||||||| ||||| ||| | ||||||||
Sbjct: 558 agagtgtacgatgatgaagtgaggaagtgggt 589

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  214 bits (108), Expect = 2e-52
 Identities = 318/388 (81%)
 Strand = Plus / Plus

                                                                        
Query: 6    tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 65
            |||| ||||| || || ||||||||||| ||  | || |||||| | |||||||| ||  
Sbjct: 655  tggaaagtggaaatgccggagagccagcaaaattgattaggcagagataccgtgaagcct 714

                                                                        
Query: 66   cagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtg 125
            ||||| | ||||||||||| ||||||||    || |||||||| |||||||| || || |
Sbjct: 715  cagacttaatcaagaagggaaagatgtgtgttctgttcatcaatgatcttgatgcaggag 774

                                                                        
Query: 126  cgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccc 185
            | ||| |  | || |||||||| || ||||| || ||||||||||||||||| ||||| |
Sbjct: 775  caggtcgtcttggtggaaccacccaatacactgtgaacaaccagatggtgaatgccactc 834

                                                                        
Query: 186  tgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagg 245
            | |||||||| || |||  |||||| || |||||||| ||||| |||||||||||||| |
Sbjct: 835  tcatgaacattgctgataaccccacaaatgtgcagcttcctggtatgtacaacaaggaag 894

                                                                        
Query: 246  agaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctc 305
            | ||| |||||||||||||| | ||||| |||||||||||||| || || || |||||||
Sbjct: 895  ataacgcccgtgtgcccatcattgtcactggtaacgatttctcaacactttatgctcctc 954

                                                                        
Query: 306  tgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcg 365
            | ||||||||||||||||||||||||||||||||||| || ||  | || ||||| || |
Sbjct: 955  tcatccgtgatggtcgtatggagaagttctactgggcaccaacaagggaagaccgcattg 1014

                                        
Query: 366  gtgtctgcaagggtatcttccagaccga 393
            |||| |||||||| || |||| ||||||
Sbjct: 1015 gtgtttgcaagggaattttccggaccga 1042

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  210 bits (106), Expect = 4e-51
 Identities = 282/338 (83%), Gaps = 2/338 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 65
           |||| ||||| || || ||||||||||| ||  | ||||||||| | |||||||| ||||
Sbjct: 659 tggaaagtggaaatgccggagagccagcaaaattgatcaggcagagataccgtgaagctg 718

                                                                       
Query: 66  cagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttgacgctggt 124
           ||||  |||||   ||||| |||||||| ||| || ||||||||||||||||| || || 
Sbjct: 719 cagatttgatcgccaagggaaagatgtg-tgctctattcatcaacgatcttgatgcagga 777

                                                                       
Query: 125 gcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccacc 184
           || ||| |  | || |||||||| || ||||| || ||||||||||||||||| ||||| 
Sbjct: 778 gcaggtcgtcttggtggaaccacccaatacactgtgaacaaccagatggtgaatgccact 837

                                                                       
Query: 185 ctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggag 244
           || |||||||| || |||  ||| || || |||||||| ||||| |||||||||||||| 
Sbjct: 838 ctcatgaacattgctgataaccctacaaatgtgcagcttcctggtatgtacaacaaggaa 897

                                                                       
Query: 245 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 304
           |||||| |||||||||||||| | ||||||||||| |||||||| ||||| || ||||||
Sbjct: 898 gagaacgcccgtgtgcccatcattgtcaccggtaatgatttctcaacgctgtatgctcct 957

                                                 
Query: 305 ctgatccgtgatggtcgtatggagaagttctactgggc 342
           || || |||||||| |||||||||||||||||||||||
Sbjct: 958 ctcattcgtgatgggcgtatggagaagttctactgggc 995

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  206 bits (104), Expect = 6e-50
 Identities = 311/380 (81%)
 Strand = Plus / Plus

                                                                       
Query: 6   tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 65
           ||||||| || ||||| |||||||| || ||| | |||||||| ||||  |||||||| |
Sbjct: 493 tggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtgtcgtgaggcgg 552

                                                                       
Query: 66  cagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtg 125
           | ||||| ||||||||||| |||||||  ||||| || ||||| |||||||| || ||||
Sbjct: 553 ccgacatcatcaagaagggaaagatgtcttgcctatttatcaatgatcttgatgcaggtg 612

                                                                       
Query: 126 cgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccc 185
           | |||||| | || || || || || ||||| || |||||||| |||||||| || ||||
Sbjct: 613 ccggtaggcttggtgggacaactcaatacactgtgaacaaccaaatggtgaatgctaccc 672

                                                                       
Query: 186 tgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagg 245
           | |||||||| || ||    || ||||| || |||||||| || |||||||||||||| |
Sbjct: 673 tcatgaacattgctgacaatccaaccaatgttcagctcccgggtatgtacaacaaggaag 732

                                                                       
Query: 246 agaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctc 305
           |||| || ||||| || ||| ||||||| ||||| || ||||||||  | ||||||||||
Sbjct: 733 agaatccacgtgtaccgatcatcgtcacaggtaatgacttctcgacattgtacgctcctc 792

                                                                       
Query: 306 tgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcg 365
           | || |||||||||||||||||||| ||||||||||| |||||| | || ||||| || |
Sbjct: 793 tcattcgtgatggtcgtatggagaaattctactgggcgcccaccagagaagaccgaattg 852

                               
Query: 366 gtgtctgcaagggtatcttc 385
           |||||||||  |||||||||
Sbjct: 853 gtgtctgcactggtatcttc 872

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  206 bits (104), Expect = 6e-50
 Identities = 311/380 (81%)
 Strand = Plus / Plus

                                                                        
Query: 6    tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 65
            ||||||| || ||||| |||||||| || ||| | |||||||| ||||  |||||||| |
Sbjct: 666  tggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtgtcgtgaggcgg 725

                                                                        
Query: 66   cagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtg 125
            | ||||| ||||||||||| |||||||  ||||| || ||||| |||||||| || ||||
Sbjct: 726  ccgacatcatcaagaagggaaagatgtcttgcctatttatcaatgatcttgatgcaggtg 785

                                                                        
Query: 126  cgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccc 185
            | |||||| | || || || || || ||||| || |||||||| |||||||| || ||||
Sbjct: 786  ccggtaggcttggtgggacaactcaatacactgtgaacaaccaaatggtgaatgctaccc 845

                                                                        
Query: 186  tgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagg 245
            | |||||||| || ||    || ||||| || |||||||| || |||||||||||||| |
Sbjct: 846  tcatgaacattgctgacaatccaaccaatgttcagctcccgggtatgtacaacaaggaag 905

                                                                        
Query: 246  agaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctc 305
            |||| || ||||| || ||| ||||||| ||||| || ||||||||  | ||||||||||
Sbjct: 906  agaatccacgtgtaccgatcatcgtcacaggtaatgacttctcgacattgtacgctcctc 965

                                                                        
Query: 306  tgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcg 365
            | || |||||||||||||||||||| ||||||||||| |||||| | || ||||| || |
Sbjct: 966  tcattcgtgatggtcgtatggagaaattctactgggcgcccaccagagaagaccgaattg 1025

                                
Query: 366  gtgtctgcaagggtatcttc 385
            |||||||||  |||||||||
Sbjct: 1026 gtgtctgcactggtatcttc 1045

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score =  198 bits (100), Expect = 1e-47
 Identities = 331/408 (81%)
 Strand = Plus / Plus

                                                                       
Query: 89  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 148
           ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 55  atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 114

                                                                       
Query: 149 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 208
           || ||||| |||||||||||||||||||| ||||| || ||||||||||| |||  ||| 
Sbjct: 115 caatacactgtcaacaaccagatggtgaatgccactctcatgaacatcgctgataacccg 174

                                                                       
Query: 209 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 268
           || || || |||||||| || |||||||||||| | |||||| || | || |||||  | 
Sbjct: 175 acaaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtccccattatt 234

                                                                       
Query: 269 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 328
           ||||| |||||||| ||||| ||  | || |||||||| |||||||||||||||||||||
Sbjct: 235 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 294

                                                                       
Query: 329 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 388
           |||||||| ||||| || ||  | || ||  | || ||||| ||||||||||| |||  |
Sbjct: 295 aagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcagg 354

                                                                       
Query: 389 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 448
           |||||||| ||   ||| ||  |||| || ||||| ||||| |||||||| |||||||| 
Sbjct: 355 accgacaacgtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatct 414

                                                           
Query: 449 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 496
           |||||||| || ||||||||| | || || || ||||| |||||||||
Sbjct: 415 attgacttctttggtgctctgagggcacgagtatacgatgatgaggtg 462

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score =  182 bits (92), Expect = 8e-43
 Identities = 209/248 (84%)
 Strand = Plus / Plus

                                                                       
Query: 153 acaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacca 212
           |||| ||||||||||||||||| ||||||||||| |||||||| || ||   ||| ||||
Sbjct: 1   acactgtcaacaaccagatggttaacgccaccctcatgaacattgctgacaacccaacca 60

                                                                       
Query: 213 acgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtca 272
           | || ||||||||||| |||||||||||| |||| ||  | ||||| |||||| |||| |
Sbjct: 61  atgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatcgtta 120

                                                                       
Query: 273 ccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagt 332
           | |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||| |
Sbjct: 121 ctggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtatggagaaat 180

                                                                       
Query: 333 tctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccg 392
           |||||||||| ||||| ||||| |||||||| ||||| ||||  |||||||||  ||| |
Sbjct: 181 tctactgggcacccactcgtgaggaccgtattggtgtttgcactggtatcttcaggactg 240

                   
Query: 393 acaatgtc 400
           ||||||||
Sbjct: 241 acaatgtc 248

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
            (pJQ4)
          Length = 1655

 Score =  178 bits (90), Expect = 1e-41
 Identities = 324/402 (80%)
 Strand = Plus / Plus

                                                                        
Query: 95   tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 154
            |||||||||||||||||||| || || || || ||||| ||||| ||||| || || |||
Sbjct: 705  tgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacccaatac 764

                                                                        
Query: 155  accgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaac 214
            || |||||||||||||||||||| ||||| || |||||||| || |||  ||| || |||
Sbjct: 765  actgtcaacaaccagatggtgaatgccactctcatgaacattgctgataacccgacaaac 824

                                                                        
Query: 215  gtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcacc 274
            || |||||||| || |||||||||||| | |||||| || | || |||||  | ||||| 
Sbjct: 825  gtccagctccccggtatgtacaacaagcaagagaacgccagagtccccattattgtcact 884

                                                                        
Query: 275  ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 334
            |||||||| ||||| ||  | || |||||||| |||||||||||||||||||||||||||
Sbjct: 885  ggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaagttc 944

                                                                        
Query: 335  tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgac 394
            || ||||| || ||  | || ||  | || ||||| ||||||||||| |||  |||||||
Sbjct: 945  tattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcaggaccgac 1004

                                                                        
Query: 395  aatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgac 454
            || ||   ||| ||  | ||  | ||||| ||||| |||||||| |||||||| ||||||
Sbjct: 1005 aacgtgcctgaggaagccgttataaagattgtcgataccttccctggacaatctattgac 1064

                                                      
Query: 455  tttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 496
            || || ||||||||| | || || || ||||| |||||||||
Sbjct: 1065 ttctttggtgctctgagggcacgagtatacgatgatgaggtg 1106

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score =  176 bits (89), Expect = 5e-41
 Identities = 263/321 (81%)
 Strand = Plus / Plus

                                                                       
Query: 68  gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 127
           ||||| |||||||||||    |||||||  || |||||||||||||| ||||| ||||| 
Sbjct: 612 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 671

                                                                       
Query: 128 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 187
           ||  | |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 672 ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 731

                                                                       
Query: 188 atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 247
           ||||||||||||||   ||| |||||||| ||||| || ||  ||||||| || ||||||
Sbjct: 732 atgaacatcgccgacaacccgaccaacgtccagctgcccggtgtgtacaagaacgaggag 791

                                                                       
Query: 248 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 307
           | ||| || |||||||| ||   ||| || ||||| ||||| || || ||||| || |||
Sbjct: 792 atccctcgcgtgcccattgtgtgcacgggcaacgacttctccaccctgtacgcgcccctg 851

                                                                       
Query: 308 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 367
           ||||| ||||| || |||||||||| |||||||   |||||||| || ||||| ||||| 
Sbjct: 852 atccgcgatggccgcatggagaagtactactggaaccccacccgcgaggaccgcatcggc 911

                                
Query: 368 gtctgcaagggtatcttccag 388
           || |||| ||| |||||||||
Sbjct: 912 gtgtgcatgggcatcttccag 932



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 428  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 487
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 972  gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031

              
Query: 488  ga 489
            ||
Sbjct: 1032 ga 1033

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  170 bits (86), Expect = 3e-39
 Identities = 212/254 (83%)
 Strand = Plus / Plus

                                                                       
Query: 89  atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 148
           ||||| || ||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 710 atgtgttgtctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 769

                                                                       
Query: 149 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 208
           || |||||||||||||||||||||||||| |||||||| |||||||| || ||   ||| 
Sbjct: 770 caatacaccgtcaacaaccagatggtgaatgccaccctcatgaacattgctgacaaccca 829

                                                                       
Query: 209 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 268
           || || || |||||||| || |||||||||||| | |||||| || | || |||||  | 
Sbjct: 830 acaaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtacccattatt 889

                                                                       
Query: 269 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 328
           ||||| |||||||| ||||| ||  | || |||||||| |||||||||||||||||||||
Sbjct: 890 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 949

                         
Query: 329 aagttctactgggc 342
           ||||||||||||||
Sbjct: 950 aagttctactgggc 963

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score =  161 bits (81), Expect = 3e-36
 Identities = 273/337 (81%)
 Strand = Plus / Plus

                                                                       
Query: 6   tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 65
           |||| ||||| || || ||||||||||||||| | || |||||  ||||| | || || |
Sbjct: 646 tggaaagtggaaatgcaggagagccagccaagttgattaggcaaaggtacagagaagcag 705

                                                                       
Query: 66  cagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtg 125
           |||| || ||||  ||||| || ||||| |||||||||||||||||||| || || || |
Sbjct: 706 cagaaatcatcagaaagggaaatatgtgttgcctcttcatcaacgatctcgatgcaggag 765

                                                                       
Query: 126 cgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccc 185
           | ||||| ||||| ||||| || || ||||| ||||||||||| |||||||| ||||| |
Sbjct: 766 ctggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtgaatgccactc 825

                                                                       
Query: 186 tgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagg 245
           | |||||||| || ||   ||| || || || |||||||| || |||||||||||| | |
Sbjct: 826 tcatgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaacaagcaag 885

                                                                       
Query: 246 agaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctc 305
           ||||  || | || || ||  ||||||| |||||||||||||| ||  | || ||||| |
Sbjct: 886 agaatgccagggtccctattatcgtcactggtaacgatttctccacattgtatgctccac 945

                                                
Query: 306 tgatccgtgatggtcgtatggagaagttctactgggc 342
           | |||||||||||||||||||||||||||||||||||
Sbjct: 946 ttatccgtgatggtcgtatggagaagttctactgggc 982

---

>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  157 bits (79), Expect = 5e-35
 Identities = 100/107 (93%)
 Strand = Plus / Plus

                                                                       
Query: 452 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 511
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |
Sbjct: 2   gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61

                                                          
Query: 512 tctaccggaatcgagaacattggcaagaggctggtgaactcgcggga 558
           |||||||| ||||||||||||||||||| ||| ||||||||||||||
Sbjct: 62  tctaccggtatcgagaacattggcaagaagcttgtgaactcgcggga 108

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score =  143 bits (72), Expect = 7e-31
 Identities = 258/320 (80%)
 Strand = Plus / Plus

                                                                       
Query: 23  ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 82
           ||||||||||| ||  | ||||||||  ||||| | ||||| || || || |||| ||||
Sbjct: 680 ggagagccagctaaattgatcaggcaaaggtacagagaggccgcggaaatcatcaggaag 739

                                                                       
Query: 83  ggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcgga 142
           || || ||||| ||||||||||||||||||||||| || || || ||||| ||||| |||
Sbjct: 740 ggaaacatgtgttgcctcttcatcaacgatcttgatgcaggagccggtagaatgggtgga 799

                                                                       
Query: 143 accacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgat 202
           || || || ||||| ||||||||||| |||||||| || || || |||||||| || |||
Sbjct: 800 actacacaatacactgtcaacaaccaaatggtgaatgctacactcatgaacattgctgat 859

                                                                       
Query: 203 gcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgccc 262
             ||| || || || || ||||| || |||||||||||| | |||||  || | || || 
Sbjct: 860 aacccgacgaatgtccaactccccggtatgtacaacaagcaagagaatgccagggtacct 919

                                                                       
Query: 263 atcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgt 322
           ||  | ||||| |||||||||||||| ||  | || || ||||| |||||||||||||||
Sbjct: 920 attattgtcactggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgt 979

                               
Query: 323 atggagaagttctactgggc 342
           |||||||| |||||||||||
Sbjct: 980 atggagaaattctactgggc 999



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 416  gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 469
            |||||||||||||| | |||||| |||||||| ||||| || ||||||||||||
Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126

---

>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score =  133 bits (67), Expect = 7e-28
 Identities = 124/143 (86%)
 Strand = Plus / Plus

                                                                       
Query: 232 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 291
           ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| ||
Sbjct: 1   gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60

                                                                       
Query: 292 gctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccg 351
             | || ||||| || ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 61  cttgtatgctccccttatccgtgatggtcgtatggagaaattctactgggcaccaacccg 120

                                  
Query: 352 tgacgaccgtatcggtgtctgca 374
            ||||| ||||| ||||||||||
Sbjct: 121 cgacgatcgtattggtgtctgca 143

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score =  123 bits (62), Expect = 7e-25
 Identities = 116/134 (86%)
 Strand = Plus / Plus

                                                                        
Query: 68   gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 127
            ||||| |||||||||||    |||||||  || |||||||||||||| ||||| ||||| 
Sbjct: 1824 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 1883

                                                                        
Query: 128  ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 187
            ||  | |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 1884 ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 1943

                          
Query: 188  atgaacatcgccga 201
            ||||||||||||||
Sbjct: 1944 atgaacatcgccga 1957



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 428  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 487
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721

              
Query: 488  ga 489
            ||
Sbjct: 2722 ga 2723

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score =  119 bits (60), Expect = 1e-23
 Identities = 279/352 (79%)
 Strand = Plus / Minus

                                                                        
Query: 6    tggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctg 65
            |||| ||||| || || |||||||| || ||| | || |||||  |||||||||||||  
Sbjct: 7243 tggaaagtggaaatgcaggagagcctgcaaagttgattaggcaaaggtaccgtgaggcgt 7184

                                                                        
Query: 66   cagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtg 125
            | ||||| ||||  || || ||||||||||| ||||||||||| |||||||| || || |
Sbjct: 7183 ccgacattatcagaaaaggaaagatgtgctgtctcttcatcaatgatcttgatgcaggag 7124

                                                                        
Query: 126  cgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccc 185
            | ||||| ||||| || || || || ||||| ||||||||||||||||| || || ||||
Sbjct: 7123 ctggtagaatgggtggcactactcaatacacagtcaacaaccagatggtaaatgcaaccc 7064

                                                                        
Query: 186  tgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggagg 245
            | |||||||| || ||   ||| ||||| || || || || || ||||||||||| || |
Sbjct: 7063 tcatgaacattgctgacaaccctaccaatgttcaacttcccggtatgtacaacaaagaag 7004

                                                                        
Query: 246  agaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctc 305
            ||||  |||| || || ||| ||||||| || || || ||||| ||| | || |||||| 
Sbjct: 7003 agaatgcccgcgtccctatcatcgtcactggcaatgacttctctacgttgtatgctcctt 6944

                                                                
Query: 306  tgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacga 357
            | || |||||||| |||||||| || ||||||||||| || || ||||||||
Sbjct: 6943 taattcgtgatggacgtatggaaaaattctactgggcacctactcgtgacga 6892

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score =  117 bits (59), Expect = 4e-23
 Identities = 176/215 (81%)
 Strand = Plus / Plus

                                                                       
Query: 128 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 187
           ||||| ||||| ||||| || || ||||| ||||||||||| |||||||| ||||| || 
Sbjct: 8   ggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtgaatgccactctc 67

                                                                       
Query: 188 atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 247
           |||||||| || ||   ||| || || || |||||||| || |||||||||||| | |||
Sbjct: 68  atgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaacaagcaagag 127

                                                                       
Query: 248 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 307
           ||  || | || || ||  ||||||| |||||||||||||| ||  | || ||||| || 
Sbjct: 128 aatgccagggtccctattatcgtcactggtaacgatttctccacattgtatgctccactt 187

                                              
Query: 308 atccgtgatggtcgtatggagaagttctactgggc 342
           |||||||||||||||||||||||||||||||||||
Sbjct: 188 atccgtgatggtcgtatggagaagttctactgggc 222



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 416 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 465
           |||||||| || || | |||||| |||||||| || ||||||||||||||
Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score =  105 bits (53), Expect = 2e-19
 Identities = 278/353 (78%)
 Strand = Plus / Plus

                                                                        
Query: 11   agtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagac 70
            |||||||| || ||||||||||| ||  | ||||||||  | ||| | ||||| || || 
Sbjct: 666  agtgggaatgcaggagagccagcaaaattgatcaggcaaagatacagagaggcagctgat 725

                                                                        
Query: 71   atgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggt 130
            || |||||||| || || ||||| || || || |||||||||||||| ||||| || || 
Sbjct: 726  atcatcaagaaagggaaaatgtgttgtctatttatcaacgatcttgatgctggagctgga 785

                                                                        
Query: 131  aggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatg 190
            ||| | || || || || |||||||| || || ||||||||||| || || || || |||
Sbjct: 786  aggcttggtgggactacccagtacacagtgaataaccagatggtaaatgctactcttatg 845

                                                                        
Query: 191  aacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaac 250
            ||||| || ||   ||| ||||| |||||||| || |||||||| |||||||| || || 
Sbjct: 846  aacattgctgacaacccaaccaatgtgcagctaccaggcatgtataacaaggaagaaaat 905

                                                                        
Query: 251  ccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatc 310
            ||| | || |||||| | || || |||||||| ||||| ||| | || || ||||| || 
Sbjct: 906  cccagagttcccatcatagtaactggtaacgacttctcaacgttatatgcacctctcatt 965

                                                                 
Query: 311  cgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 363
            ||||||||||| ||||| || |||||||||||||| || ||||| || |||||
Sbjct: 966  cgtgatggtcggatggataaattctactgggctccaactcgtgaagatcgtat 1018



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                        
Query: 425  gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 484
            |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || 
Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139

                                  
Query: 485  gacgatgaggtgcgcaagtggg 506
            |||||||| ||| | |||||||
Sbjct: 1140 gacgatgaagtgagaaagtggg 1161

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                          
Query: 149    cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 208
              |||||||||||||||| |||  |||||| ||||||||||||||||||||||||   ||||
Sbjct: 445720 cagtacaccgtcaacacccaactggtgagcgccaccctgatgaacatcgccgacaacccc 445661

                            
Query: 209    accaacgtgcagct 222
              ||||||||||||||
Sbjct: 445660 accaacgtgcagct 445647

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 155/192 (80%)
 Strand = Plus / Plus

                                                                       
Query: 149 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 208
           |||||||| || |||||||||||||| || |||||||| |||||||| || |||  ||| 
Sbjct: 487 cagtacactgtgaacaaccagatggtcaatgccaccctcatgaacattgctgataaccca 546

                                                                       
Query: 209 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 268
           || || || ||| | ||||| |||||||||||||| || || || ||||| || || || 
Sbjct: 547 acgaatgttcagttgcctggaatgtacaacaaggaagaaaatcctcgtgttccaattgtt 606

                                                                       
Query: 269 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 328
           || || || || |||||||| ||  | || |||||  |||| |||||||| |||||||||
Sbjct: 607 gtgacaggaaatgatttctcaactttgtatgctccattgattcgtgatgggcgtatggag 666

                       
Query: 329 aagttctactgg 340
           ||||||||||||
Sbjct: 667 aagttctactgg 678

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 199/254 (78%)
 Strand = Plus / Minus

                                                                          
Query: 89     atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 148
              ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 104078 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 104019

                                                                          
Query: 149    cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 208
              |||||||| || ||||| || ||||| || || || || |||||||| || |||  ||| 
Sbjct: 104018 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacattgctgataaccca 103959

                                                                          
Query: 209    accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 268
              || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| | 
Sbjct: 103958 acaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcatt 103899

                                                                          
Query: 269    gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 328
              || || ||||| ||||| || ||  | || |||||||| || ||||| ||||||||||||
Sbjct: 103898 gttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatggag 103839

                            
Query: 329    aagttctactgggc 342
              || ||||| |||||
Sbjct: 103838 aaattctattgggc 103825

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 199/254 (78%)
 Strand = Plus / Minus

                                                                         
Query: 89    atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 148
             ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 83103 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 83044

                                                                         
Query: 149   cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 208
             |||||||| || ||||| || ||||| || || || || |||||||| || |||  ||| 
Sbjct: 83043 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacattgctgataaccca 82984

                                                                         
Query: 209   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 268
             || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| | 
Sbjct: 82983 acaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcatt 82924

                                                                         
Query: 269   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 328
             || || ||||| ||||| || ||  | || |||||||| || ||||| ||||||||||||
Sbjct: 82923 gttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatggag 82864

                           
Query: 329   aagttctactgggc 342
             || ||||| |||||
Sbjct: 82863 aaattctattgggc 82850

---

>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence
          Length = 262

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 136/170 (80%)
 Strand = Plus / Plus

                                                                       
Query: 80  aagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggc 139
           ||||| ||||||||   |||||||||||| |||||||| || || || |||||  | || 
Sbjct: 19  aaggggaagatgtgtgtcctcttcatcaatgatcttgatgcaggggctggtagacttggt 78

                                                                       
Query: 140 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 199
           ||||| || || || || ||||| |||||||||||||| || ||||| |||||||| || 
Sbjct: 79  ggaactacacaatatacagtcaataaccagatggtgaatgcaacccttatgaacattgct 138

                                                             
Query: 200 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 249
           |||   || || || || ||||||||||| |||||||||||  |||||||
Sbjct: 139 gataatccaactaatgttcagctccctggtatgtacaacaaacaggagaa 188

---

>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete
           cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 269 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 328
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 329 aagttctactgg 340
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 269 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 328
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924

                       
Query: 329 aagttctactgg 340
           ||||||||||||
Sbjct: 925 aagttctactgg 936

---

>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 269 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 328
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 329 aagttctactgg 340
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 269 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 328
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932

                       
Query: 329 aagttctactgg 340
           ||||||||||||
Sbjct: 933 aagttctactgg 944

---

>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 269 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 328
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945

                       
Query: 329 aagttctactgg 340
           ||||||||||||
Sbjct: 946 aagttctactgg 957

---

>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 269   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 328
             ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627

                         
Query: 329   aagttctactgg 340
             ||||||||||||
Sbjct: 97626 aagttctactgg 97615

---

>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 278 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 337
           ||||||||||| || || || ||||| ||||||||||| ||  | |||||||||||||||
Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995

              
Query: 338 tgg 340
           |||
Sbjct: 996 tgg 998

---

>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 418  caagatcgtcgacaccttccc 438
            |||||||||||||||||||||
Sbjct: 3673 caagatcgtcgacaccttccc 3653

---

>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 593

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 269 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 327
           ||||| || ||||||||||| || || || |||| | ||||||||||| ||  | |||||
Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195

                        
Query: 328 gaagttctactgg 340
           |||||||||||||
Sbjct: 196 gaagttctactgg 208

---

>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 365   ggtgtctgcaagggtatcttccag 388
             |||||||||||||||||| |||||
Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288

---

>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B
          Length = 1010

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 agtgacgagtctgtcgtcaa 420
           ||||||||||||||||||||
Sbjct: 308 agtgacgagtctgtcgtcaa 289

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 350     cgtgacgaccgtatcggtgt 369
               ||||||||||||||||||||
Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308

---

>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2739

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  tgatgaacatcgccgatgcc 205
            ||||||||||||||||||||
Sbjct: 1896 tgatgaacatcgccgatgcc 1877

---

>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  tgatgaacatcgccgatgcc 205
            ||||||||||||||||||||
Sbjct: 1897 tgatgaacatcgccgatgcc 1878

---

>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence
          Length = 42802

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   tgatgaacatcgccgatgcc 205
             ||||||||||||||||||||
Sbjct: 34318 tgatgaacatcgccgatgcc 34337

---

>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA
            complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 186  tgatgaacatcgccgatgcc 205
            ||||||||||||||||||||
Sbjct: 1882 tgatgaacatcgccgatgcc 1863

---

>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete
             sequence
          Length = 208153

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     tggagagtgggaacgctgga 25
             ||||||||||||||||||||
Sbjct: 90247 tggagagtgggaacgctgga 90228


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,288,823
Number of Sequences: 3902068
Number of extensions: 3288823
Number of successful extensions: 62866
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62540
Number of HSP's gapped (non-prelim): 279
length of query: 558
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 535
effective length of database: 17,143,297,704
effective search space: 9171664271640
effective search space used: 9171664271640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---