>gb|AY108753.1| Zea mays PCO090965 mRNA sequence
          Length = 1019

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                       
Query: 306 tatgtgcgagccgacaagatcgatctcaccagcctcgacatccagctggagcaacagctc 365
           |||||||| || |||||||| ||||| || ||||||||||||||||||||| | ||||||
Sbjct: 681 tatgtgcgtgcagacaagattgatcttacgagcctcgacatccagctggagaaccagctc 740

                  
Query: 366 aacaaga 372
           | |||||
Sbjct: 741 accaaga 747

>ref|XM_469008.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1567

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 309 gtgcgagccgacaagatcgatctcaccagcctcgacatccagct 352
           ||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 85  gtgcgcgccgacaagatcgatctcaccagcctagatatccagct 128

>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete
              sequence
          Length = 120254

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                          
Query: 309    gtgcgagccgacaagatcgatctcaccagcctcgacatccagct 352
              ||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 109762 gtgcgcgccgacaagatcgatctcaccagcctagatatccagct 109719

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 309      gtgcgagccgacaagatcgatctcaccagcctcgacatccagct 352
                ||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 24364195 gtgcgcgccgacaagatcgatctcaccagcctagatatccagct 24364238

>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
             sequence
          Length = 171664

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                         
Query: 309   gtgcgagccgacaagatcgatctcaccagcctcgacatccagct 352
             ||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 16429 gtgcgcgccgacaagatcgatctcaccagcctagatatccagct 16386

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                            
Query: 309      gtgcgagccgacaagatcgatctcaccagcctcgacatccagct 352
                ||||| |||||||||||||||||||||||||| || ||||||||
Sbjct: 24281664 gtgcgcgccgacaagatcgatctcaccagcctagatatccagct 24281707

>ref|XM_775936.1| PREDICTED: Strongylocentrotus purpuratus similar to CG11081-PA,
            isoform A (LOC575541), mRNA
          Length = 4581

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 353  ggagcaacagctcaacaagaa 373
            |||||||||||||||||||||
Sbjct: 4248 ggagcaacagctcaacaagaa 4268

>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 58      ccgtcagctccacctctgctg 78
               |||||||||||||||||||||
Sbjct: 1384891 ccgtcagctccacctctgctg 1384871

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 279     aggaccgggagcttggggagcagcg 303
               |||||||||||||||| ||||||||
Sbjct: 4557121 aggaccgggagcttggcgagcagcg 4557097

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 323     gatcgatctcaccagcctcga 343
               |||||||||||||||||||||
Sbjct: 4462364 gatcgatctcaccagcctcga 4462344

>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence
          Length = 204306

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 328    atctcaccagcctcgacatccagc 351
              |||||||||||||||| |||||||
Sbjct: 131792 atctcaccagcctcgagatccagc 131815

>gb|AC008224.19| Drosophila melanogaster clone BACR29J02, complete sequence
          Length = 181633

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 348   cagctggagcaacagctcaa 367
             ||||||||||||||||||||
Sbjct: 49398 cagctggagcaacagctcaa 49417

>gb|AF142884.1| Uncultured archaeon DEEP-10 16S ribosomal RNA gene, partial
           sequence
          Length = 986

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 atctcaccagcctcgacatc 347
           ||||||||||||||||||||
Sbjct: 466 atctcaccagcctcgacatc 485

>gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosome 17, complete
             sequence
          Length = 192971

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 328   atctcaccagcctcgacatccagc 351
             |||||||||||||||| |||||||
Sbjct: 13156 atctcaccagcctcgagatccagc 13179

>gb|AC126722.7| Rattus norvegicus 4 BAC CH230-5L13 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 217690

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    ctggagcaacagctcaacaa 370
              ||||||||||||||||||||
Sbjct: 163559 ctggagcaacagctcaacaa 163540

>emb|BX546480.9| Zebrafish DNA sequence from clone DKEY-175C11, complete sequence
          Length = 203056

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    ctgcctgaggtgaaattcaa 277
              ||||||||||||||||||||
Sbjct: 184817 ctgcctgaggtgaaattcaa 184836

>gb|AE003600.4| Drosophila melanogaster chromosome 3R, section 8 of 118 of the complete
             sequence
          Length = 292632

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 348   cagctggagcaacagctcaa 367
             ||||||||||||||||||||
Sbjct: 79946 cagctggagcaacagctcaa 79927

>dbj|AB009371.1| Mus musculus Tsc2 and Nthl1 genes for tuberin and homlogue of
            endonuclease III, complete cds
          Length = 11919

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 328  atctcaccagcctcgacatccagc 351
            |||||||||||||||| |||||||
Sbjct: 4442 atctcaccagcctcgagatccagc 4419

>gb|AC145168.5| Mus musculus BAC clone RP23-398K14 from 3, complete sequence
          Length = 217058

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    cgcgcccccctcccgtcagctcca 69
             ||||||||||||||||||| ||||
Sbjct: 97982 cgcgcccccctcccgtcagttcca 98005


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,150,912
Number of Sequences: 3902068
Number of extensions: 3150912
Number of successful extensions: 52147
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51967
Number of HSP's gapped (non-prelim): 180
length of query: 424
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 402
effective length of database: 17,147,199,772
effective search space: 6893174308344
effective search space used: 6893174308344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)