ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal17c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 206 4e-50
2dbj|AK121949.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 4e-50
3gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 206 4e-50
4emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa... 206 4e-50
5dbj|AK072071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
6gb|AC098572.2| Oryza sativa (japonica cultivar-group) chromosome... 109 7e-21
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 109 7e-21
8emb|AJ271605.2|DSA271605 Dunaliella salina mRNA for chloroplast-... 80 6e-12
9gb|AY072744.1| Dunaliella salina heat shock protein 70B (hsp70B)... 72 1e-09
10gb|CP000110.1| Synechococcus sp. CC9605, complete genome 62 1e-06
11emb|X96502.1|CRHSP70B C.reinhardtii hsp70b gene 58 2e-05
12gb|U92815.1|CLU92815 Citrullus lanatus heat shock protein 70 pre... 50 0.005
13gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 48 0.021
14gb|CP000097.1| Synechococcus sp. CC9902, complete genome 46 0.083
15gb|AC140550.31| Medicago truncatula clone mth2-54a24, complete s... 46 0.083
16emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 46 0.083
17gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 44 0.33
18gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 44 0.33
19emb|X77458.1|SCDNAJ S.coelicolor dnaK, grpE and dnaJ genes 44 0.33
20emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 44 0.33
21gb|L46700.1|STMDNAK Streptomyces coelicolor DnaK (dnaK), GrpE (g... 44 0.33
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
23dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.33
24dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
25dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.33
26gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.33
27gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.3
28emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segmen... 42 1.3
29gb|L12237.1|MSG8318K Mycobacterium avium (clone Mavc83) DNA sequ... 42 1.3
30ref|XM_483577.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.1
31ref|NM_190356.1| Oryza sativa (japonica cultivar-group), predic... 40 5.1
32ref|XM_473057.1| Oryza sativa (japonica cultivar-group), predic... 40 5.1
33gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence 40 5.1
34gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 5.1
35gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.1
36gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 5.1
37emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.1
38emb|CR655756.2|CNS0F4YA Tetraodon nigroviridis full-length cDNA 40 5.1
39ref|NM_198366.1| Danio rerio eukaryotic translation initiation f... 40 5.1
40emb|CR925828.3| Zebrafish DNA sequence from clone DKEY-156K7 in ... 40 5.1
41emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 5.1
42gb|BC048899.1| Danio rerio eukaryotic translation initiation fac... 40 5.1
43gb|AY738621.1| Natronococcus occultus DnaK gene, partial cds 40 5.1
44gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 5.1
45dbj|AK132201.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 5.1
46gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.1
47ref|XM_684934.1| PREDICTED: Danio rerio similar to Eukaryotic tr... 40 5.1
48ref|XM_704278.1| PREDICTED: Danio rerio similar to Eukaryotic tr... 40 5.1
49gb|AC158760.4| Mus musculus chromosome 5, clone RP23-319E24, com... 40 5.1
50dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
51dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
52dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
53dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
54gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, comp... 40 5.1
55dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
56gb|AC025164.37| Homo sapiens 12 BAC RP11-796E2 (Roswell Park Can... 40 5.1
57dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
58dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
59dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
60dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
61dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
62gb|AF135163.1|AF135163 Pseudomonas syringae pv. glycinea DnaK pr... 40 5.1
63gb|AY752741.1| Mesorhizobium loti strain ATCC 33669 DnaK gene, c... 40 5.1
64emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 5.1
65dbj|AP006543.1| Homo sapiens genomic DNA, chromosome 8p12, clone... 40 5.1
66gb|AF073320.1|AF073320 Streptomyces scabies strain ATCC33282 ORF... 40 5.1
67gb|AF073319.1|AF073319 Streptomyces scabies strain 87.22 ORFtnp ... 40 5.1
68gb|AF073318.1|AF073318 Streptomyces acidiscabies strain ATCC4900... 40 5.1
69gb|AF073316.1|AF073316 Streptomyces acidiscabies strain 84.104 O... 40 5.1
70gb|AF073315.1|AF073315 Streptomyces turgidiscabies strain Hi-C-1... 40 5.1
71gb|AF073314.1|AF073314 Streptomyces turgidiscabies strain Car-8 ... 40 5.1
72gb|AY707080.1| Streptomyces turgidiscabies pathogenicity island ... 40 5.1
73gb|AC111107.18| Mus musculus chromosome 5, clone RP23-195P3, com... 40 5.1
74gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 5.1
75dbj|AP006183.1| Homo sapiens genomic DNA, chromosome 8p12, clone... 40 5.1
76gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.1
77gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.1
78gb|AF031232.1|AF031232 Streptomyces scabies transposase pseudoge... 40 5.1
79emb|AL606962.22| Mouse DNA sequence from clone RP23-29H22 on chr... 40 5.1
80dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  206 bits (104), Expect = 4e-50
 Identities = 137/148 (92%)
 Strand = Plus / Plus

                                                                           
Query: 223     cgatgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccg 282
               ||||||||||| ||||||||||||||||||| |||||||| || || ||||||||||| |
Sbjct: 7985422 cgatgcgggtggcgtgcgagaaggtggtggggatcgacctcgggacgaccaactccgcgg 7985481

                                                                           
Query: 283     tcgcggcgatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacga 342
               | ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7985482 tggcggcgatggagggcgggaagccgacggtcatcaccaacgccgagggccagcggacga 7985541

                                           
Query: 343     cgccttccgtggtggcttacaccaaggg 370
               |||| ||||||||||| |||||||||||
Sbjct: 7985542 cgccctccgtggtggcgtacaccaaggg 7985569
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>dbj|AK121949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107J07, full
           insert sequence
          Length = 2462

 Score =  206 bits (104), Expect = 4e-50
 Identities = 137/148 (92%)
 Strand = Plus / Plus

                                                                       
Query: 223 cgatgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccg 282
           ||||||||||| ||||||||||||||||||| |||||||| || || ||||||||||| |
Sbjct: 215 cgatgcgggtggcgtgcgagaaggtggtggggatcgacctcgggacgaccaactccgcgg 274

                                                                       
Query: 283 tcgcggcgatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacga 342
           | ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 275 tggcggcgatggagggcgggaagccgacggtcatcaccaacgccgagggccagcggacga 334

                                       
Query: 343 cgccttccgtggtggcttacaccaaggg 370
           |||| ||||||||||| |||||||||||
Sbjct: 335 cgccctccgtggtggcgtacaccaaggg 362
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  206 bits (104), Expect = 4e-50
 Identities = 137/148 (92%)
 Strand = Plus / Plus

                                                                           
Query: 223     cgatgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccg 282
               ||||||||||| ||||||||||||||||||| |||||||| || || ||||||||||| |
Sbjct: 7985303 cgatgcgggtggcgtgcgagaaggtggtggggatcgacctcgggacgaccaactccgcgg 7985362

                                                                           
Query: 283     tcgcggcgatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacga 342
               | ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7985363 tggcggcgatggagggcgggaagccgacggtcatcaccaacgccgagggccagcggacga 7985422

                                           
Query: 343     cgccttccgtggtggcttacaccaaggg 370
               |||| ||||||||||| |||||||||||
Sbjct: 7985423 cgccctccgtggtggcgtacaccaaggg 7985450
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>emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa0077B14 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 153111

 Score =  206 bits (104), Expect = 4e-50
 Identities = 137/148 (92%)
 Strand = Plus / Minus

                                                                         
Query: 223   cgatgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccg 282
             ||||||||||| ||||||||||||||||||| |||||||| || || ||||||||||| |
Sbjct: 14748 cgatgcgggtggcgtgcgagaaggtggtggggatcgacctcgggacgaccaactccgcgg 14689

                                                                         
Query: 283   tcgcggcgatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacga 342
             | ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 14688 tggcggcgatggagggcgggaagccgacggtcatcaccaacgccgagggccagcggacga 14629

                                         
Query: 343   cgccttccgtggtggcttacaccaaggg 370
             |||| ||||||||||| |||||||||||
Sbjct: 14628 cgccctccgtggtggcgtacaccaaggg 14601
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>dbj|AK072071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111L16, full
           insert sequence
          Length = 2201

 Score =  145 bits (73), Expect = 1e-31
 Identities = 94/101 (93%)
 Strand = Plus / Plus

                                                                       
Query: 270 accaactccgccgtcgcggcgatggagggcggtaagccgacggtgatcaccaacgccgag 329
           ||||||||||| || ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 7   accaactccgcggtggcggcgatggagggcgggaagccgacggtcatcaccaacgccgag 66

                                                    
Query: 330 ggccagcggacgacgccttccgtggtggcttacaccaaggg 370
           | ||||||||||||||| ||||||||||| |||||||||||
Sbjct: 67  gaccagcggacgacgccctccgtggtggcgtacaccaaggg 107
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>gb|AC098572.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OJ1234_D05, complete sequence
          Length = 107476

 Score =  109 bits (55), Expect = 7e-21
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                         
Query: 226   tgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccgtcg 285
             |||||||| |||||||||||||||| || |||||||| || || ||||||||||| || |
Sbjct: 32623 tgcgggtggcgtgcgagaaggtggtcgggatcgacctcgggaccaccaactccgcggtgg 32682

                                                            
Query: 286   cggcgatggagggcggtaagccgacggtgatcaccaacgccgagggc 332
             |||| ||||||||||| ||||||||| |  |||||||||||||||||
Sbjct: 32683 cggccatggagggcggcaagccgacgatcgtcaccaacgccgagggc 32729
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  109 bits (55), Expect = 7e-21
 Identities = 94/107 (87%)
 Strand = Plus / Plus

                                                                            
Query: 226      tgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccgtcg 285
                |||||||| |||||||||||||||| || |||||||| || || ||||||||||| || |
Sbjct: 13488577 tgcgggtggcgtgcgagaaggtggtcgggatcgacctcgggaccaccaactccgcggtgg 13488636

                                                               
Query: 286      cggcgatggagggcggtaagccgacggtgatcaccaacgccgagggc 332
                |||| ||||||||||| ||||||||| |  |||||||||||||||||
Sbjct: 13488637 cggccatggagggcggcaagccgacgatcgtcaccaacgccgagggc 13488683



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 22      cccctccgggccatcgccgcc 42
               |||||||||||||||||||||
Sbjct: 6844023 cccctccgggccatcgccgcc 6844003
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>emb|AJ271605.2|DSA271605 Dunaliella salina mRNA for chloroplast-localised heat shock protein
           (hsp70B gene)
          Length = 2764

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                       
Query: 240 gagaaggtggtgggaatcgacctgggcactaccaactccgccgtcgcggcgatggagggc 299
           |||||||||||||| |||||| |||| || ||||||||||| || || ||||||||||| 
Sbjct: 201 gagaaggtggtgggcatcgacttgggaaccaccaactccgctgtggcagcgatggaggga 260

                                           
Query: 300 ggtaagccgacggtgatcaccaacgccgaggg 331
           || ||||||||  | ||||||||||| |||||
Sbjct: 261 ggcaagccgaccatcatcaccaacgctgaggg 292
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>gb|AY072744.1| Dunaliella salina heat shock protein 70B (hsp70B) mRNA, complete
           cds
          Length = 2732

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                       
Query: 240 gagaaggtggtgggaatcgacctgggcactaccaactccgccgtcgcggcgatggagggc 299
           ||||||||||| || |||||| |||| || ||||||||||| || || ||||||||||| 
Sbjct: 145 gagaaggtggttggcatcgacttgggaaccaccaactccgctgtggcagcgatggaggga 204

                                           
Query: 300 ggtaagccgacggtgatcaccaacgccgaggg 331
           || ||||| ||| | ||| |||||||||||||
Sbjct: 205 ggcaagcccacgatcatcgccaacgccgaggg 236
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                           
Query: 290     gatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacgacgccttc 349
               ||||||||| || ||||| || |||||| | ||||||||||||   || |||||||||||
Sbjct: 2489024 gatggagggtggcaagcccaccgtgatcgcgaacgccgagggcttccgcacgacgccttc 2488965

                              
Query: 350     cgtggtggcttacac 364
               |||||| ||||||||
Sbjct: 2488964 cgtggttgcttacac 2488950
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>emb|X96502.1|CRHSP70B C.reinhardtii hsp70b gene
          Length = 5598

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                        
Query: 244  aggtggtgggaatcgacctgggcactaccaactccgccgtcgcggcgatggagggcggta 303
            |||| ||||| ||||| |||||||| |||||||| || || || || |||||||| || |
Sbjct: 1440 aggtcgtgggtatcgatctgggcacgaccaactcggctgtggctgccatggagggtggca 1499

                                         
Query: 304  agccgacggtgatcaccaacgccgagggc 332
            |||||||  | ||||||||||| ||||||
Sbjct: 1500 agccgaccatcatcaccaacgctgagggc 1528
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>gb|U92815.1|CLU92815 Citrullus lanatus heat shock protein 70 precursor mRNA, complete
           cds
          Length = 2430

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 100/125 (80%)
 Strand = Plus / Plus

                                                                       
Query: 240 gagaaggtggtgggaatcgacctgggcactaccaactccgccgtcgcggcgatggagggc 299
           ||||| || |||||||| || || || ||||| |||||||| || ||||| ||||| || 
Sbjct: 247 gagaaagttgtgggaattgatcttggaactactaactccgcagttgcggccatggaaggt 306

                                                                       
Query: 300 ggtaagccgacggtgatcaccaacgccgagggccagcggacgacgccttccgtggtggct 359
           || ||||| ||  |  | ||||||||||| ||| || | |||||||| || |||||||||
Sbjct: 307 gggaagccaactattgtaaccaacgccgaaggcaagagaacgacgccatcggtggtggct 366

                
Query: 360 tacac 364
           |||||
Sbjct: 367 tacac 371
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 249     gtgggaatcgacctgggcactaccaact 276
               ||||| ||||||||||||||||||||||
Sbjct: 3798968 gtgggcatcgacctgggcactaccaact 3798941
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 290     gatggagggcggtaagccgacggtgatcaccaacgccgagggc 332
               ||||||||| |||||||| || || ||| ||||||||||||||
Sbjct: 2215405 gatggagggtggtaagcccaccgttatcgccaacgccgagggc 2215363
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>gb|AC140550.31| Medicago truncatula clone mth2-54a24, complete sequence
          Length = 129388

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                         
Query: 262   tgggcactaccaactccgccgtcgcggcgatggagggcggtaagccgacggtgatcacca 321
             |||| |||||||| ||||||||||| || ||||| || || || || ||  | |||||||
Sbjct: 26515 tgggtactaccaattccgccgtcgccgccatggaaggtggcaaacctaccatcatcacca 26574

                                                            
Query: 322   acgccgagggccagcggacgacgccttccgtggtggcttacaccaag 368
             ||||||| || ||||| || || || || || || ||||||||||||
Sbjct: 26575 acgccgaaggtcagcgtaccactccctctgtcgttgcttacaccaag 26621
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 248     ggtgggaatcgacctgggcactaccaactcc 278
               |||||| |||||||||||||| |||||||||
Sbjct: 1064481 ggtgggcatcgacctgggcaccaccaactcc 1064511
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 249     gtgggaatcgacctgggcactaccaa 274
               |||||||||||| |||||||||||||
Sbjct: 5209598 gtgggaatcgacttgggcactaccaa 5209573



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 255    atcgacctgggcactaccaactcc 278
              ||||||||||| ||||||||||||
Sbjct: 894940 atcgacctggggactaccaactcc 894963
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 249     gtgggaatcgacctgggcactaccaa 274
               ||||| ||||||||||||||||||||
Sbjct: 1397489 gtgggtatcgacctgggcactaccaa 1397514



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 255     atcgacctgggcactaccaactcc 278
               ||||||||||| ||||||||||||
Sbjct: 4992600 atcgacctggggactaccaactcc 4992577
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>emb|X77458.1|SCDNAJ S.coelicolor dnaK, grpE and dnaJ genes
          Length = 5611

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                        
Query: 255  atcgacctgggcactaccaactccgccgtcgcggcgatggagggcggtaagccgacggtg 314
            |||||||||||||| || ||||||| ||||   |   ||||||||||  |||| || || 
Sbjct: 1894 atcgacctgggcacgactaactccgtcgtcagcgttctggagggcggcgagcccaccgtc 1953

                              
Query: 315  atcaccaacgccgagggc 332
            ||||||||||||||||||
Sbjct: 1954 atcaccaacgccgagggc 1971
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                          
Query: 255    atcgacctgggcactaccaactccgccgtcgcggcgatggagggcggtaagccgacggtg 314
              |||||||||||||| || ||||||| ||||   |   ||||||||||  |||| || || 
Sbjct: 134725 atcgacctgggcacgactaactccgtcgtcagcgttctggagggcggcgagcccaccgtc 134666

                                
Query: 315    atcaccaacgccgagggc 332
              ||||||||||||||||||
Sbjct: 134665 atcaccaacgccgagggc 134648
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>gb|L46700.1|STMDNAK Streptomyces coelicolor DnaK (dnaK), GrpE (grpE), DnaJ (dnaJ), and
           heat shock protein (hspR) genes, complete cds
          Length = 4648

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                       
Query: 255 atcgacctgggcactaccaactccgccgtcgcggcgatggagggcggtaagccgacggtg 314
           |||||||||||||| || ||||||| ||||   |   ||||||||||  |||| || || 
Sbjct: 218 atcgacctgggcacgactaactccgtcgtcagcgttctggagggcggcgagcccaccgtc 277

                             
Query: 315 atcaccaacgccgagggc 332
           ||||||||||||||||||
Sbjct: 278 atcaccaacgccgagggc 295
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 4        gcccacctccttctccatcccctccg 29
                ||||||| ||||||||||||||||||
Sbjct: 18219997 gcccaccaccttctccatcccctccg 18220022
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                           
Query: 255     atcgacctgggcactaccaactccgccgtcgcggcgatggagggcggtaagccgacggtg 314
               |||||||||||||| || ||||||| ||||   |   ||||||||||  |||| || || 
Sbjct: 5479072 atcgacctgggcacgactaactccgtcgtcagcgttctggagggcggcgagcccaccgtc 5479131

                                 
Query: 315     atcaccaacgccgagggc 332
               ||||||||||||||||||
Sbjct: 5479132 atcaccaacgccgagggc 5479149



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 102    tcccaggtcagcgcgatggcca 123
              ||||||||||||||||||||||
Sbjct: 405428 tcccaggtcagcgcgatggcca 405407



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 102    tcccaggtcagcgcgatggcca 123
              ||||||||||||||||||||||
Sbjct: 351862 tcccaggtcagcgcgatggcca 351841



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 249     gtgggaatcgacctgggcactaccaactc 277
               ||||| |||||||||||||| ||||||||
Sbjct: 8630212 gtgggcatcgacctgggcaccaccaactc 8630240
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>dbj|AP005841.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0052M16
          Length = 145423

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 4     gcccacctccttctccatcccctccg 29
             ||||||| ||||||||||||||||||
Sbjct: 21210 gcccaccaccttctccatcccctccg 21235
to top
>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0047E05
          Length = 184323

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 4      gcccacctccttctccatcccctccg 29
              ||||||| ||||||||||||||||||
Sbjct: 143398 gcccaccaccttctccatcccctccg 143423
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 107     ggtcagcgcgatggccagcgcc 128
               ||||||||||||||||||||||
Sbjct: 4521105 ggtcagcgcgatggccagcgcc 4521126
to top
>gb|AC135914.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0074P11, complete sequence
          Length = 148753

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    cccctccgggccatcgccgcc 42
             |||||||||||||||||||||
Sbjct: 74977 cccctccgggccatcgccgcc 74957
to top
>emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segment 7/7
          Length = 344615

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 336    cggacgacgccttccgtggtggcttacaccaag 368
              ||||| ||||| ||||| |||||||||||||||
Sbjct: 325190 cggaccacgccctccgtcgtggcttacaccaag 325158
to top
>gb|L12237.1|MSG8318K Mycobacterium avium (clone Mavc83) DNA sequence encoding an 18 kDa
           protein
          Length = 610

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 gcggcggccggcggtcatgcc 178
           |||||||||||||||||||||
Sbjct: 254 gcggcggccggcggtcatgcc 274
to top
>ref|XM_483577.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 510

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 6   ccacctccttctccatcccctccg 29
           |||||||||||||| |||||||||
Sbjct: 337 ccacctccttctccttcccctccg 314
to top
>ref|NM_190356.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 117 atggccagcgcctccccgtc 136
           ||||||||||||||||||||
Sbjct: 265 atggccagcgcctccccgtc 284
to top
>ref|XM_473057.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 651

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 6   ccacctccttctccatcccctccg 29
           |||||||||||||| |||||||||
Sbjct: 466 ccacctccttctccttcccctccg 443
to top
>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence
          Length = 130987

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      gccgcccacctccttctcca 20
              ||||||||||||||||||||
Sbjct: 130533 gccgcccacctccttctcca 130514
to top
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 187    tgcgggttgctcgtggcgggcggc 210
              |||||||||| |||||||||||||
Sbjct: 433794 tgcgggttgcgcgtggcgggcggc 433817
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 255     atcgacctgggcactaccaactcc 278
               ||||||||||| ||||||||||||
Sbjct: 5077639 atcgacctggggactaccaactcc 5077616
to top
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 255     atcgacctgggcactaccaactcc 278
               ||||||||||| ||||||||||||
Sbjct: 4797113 atcgacctggggactaccaactcc 4797090
to top
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     ccacctccttctccatcccctccg 29
             |||||||||||||| |||||||||
Sbjct: 73214 ccacctccttctccttcccctccg 73237
to top
>emb|CR655756.2|CNS0F4YA Tetraodon nigroviridis full-length cDNA
          Length = 368

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 246 gtggtgggaatcgacctgggcactaccaactc 277
           ||||| ||||||||||||||||| ||| ||||
Sbjct: 233 gtggttggaatcgacctgggcaccacctactc 264
to top
>ref|NM_198366.1| Danio rerio eukaryotic translation initiation factor 4A, isoform
          1A (eif4a1a), mRNA
          Length = 2390

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 16 ctccatcccctccgggccat 35
          ||||||||||||||||||||
Sbjct: 65 ctccatcccctccgggccat 46
to top
>emb|CR925828.3| Zebrafish DNA sequence from clone DKEY-156K7 in linkage group 16,
            complete sequence
          Length = 188634

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   ctccatcccctccgggccat 35
            ||||||||||||||||||||
Sbjct: 1429 ctccatcccctccgggccat 1448
to top
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    gccggcggcggccggcggtc 173
              ||||||||||||||||||||
Sbjct: 227738 gccggcggcggccggcggtc 227757
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>gb|BC048899.1| Danio rerio eukaryotic translation initiation factor 4A, isoform
          1A, mRNA (cDNA clone MGC:55961 IMAGE:3819402), complete
          cds
          Length = 2390

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 16 ctccatcccctccgggccat 35
          ||||||||||||||||||||
Sbjct: 65 ctccatcccctccgggccat 46
to top
>gb|AY738621.1| Natronococcus occultus DnaK gene, partial cds
          Length = 1359

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 319 ccaacgccgagggccagcggacgacgcc 346
           ||||||| |||||| |||||||||||||
Sbjct: 35  ccaacgcggagggcgagcggacgacgcc 62
to top
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 312     gtgatcaccaacgccgaggg 331
               ||||||||||||||||||||
Sbjct: 3036302 gtgatcaccaacgccgaggg 3036321
to top
>dbj|AK132201.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:3425403H08 product:nuclear
           receptor subfamily 2, group E, member 1, full insert
           sequence
          Length = 3242

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 152 gagccggcggcggccggcgg 171
           ||||||||||||||||||||
Sbjct: 600 gagccggcggcggccggcgg 619
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 309     acggtgatcaccaacgccgagggc 332
               ||||||||| ||||||||||||||
Sbjct: 5197261 acggtgatcgccaacgccgagggc 5197284
to top
>ref|XM_684934.1| PREDICTED: Danio rerio similar to Eukaryotic translation
          initiation factor 4A, isoform 1A, transcript variant 1
          (LOC564228), mRNA
          Length = 2630

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 16 ctccatcccctccgggccat 35
          ||||||||||||||||||||
Sbjct: 69 ctccatcccctccgggccat 50
to top
>ref|XM_704278.1| PREDICTED: Danio rerio similar to Eukaryotic translation
          initiation factor 4A, isoform 1A, transcript variant 2
          (LOC564228), mRNA
          Length = 1009

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 16 ctccatcccctccgggccat 35
          ||||||||||||||||||||
Sbjct: 64 ctccatcccctccgggccat 45
to top
>gb|AC158760.4| Mus musculus chromosome 5, clone RP23-319E24, complete sequence
          Length = 191682

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     cctccttctccatcccctcc 28
             ||||||||||||||||||||
Sbjct: 78971 cctccttctccatcccctcc 78952
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 6        ccacctccttctccatcccctccg 29
                |||||||||||||| |||||||||
Sbjct: 24952629 ccacctccttctccttcccctccg 24952652
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 117      atggccagcgcctccccgtc 136
                ||||||||||||||||||||
Sbjct: 12343249 atggccagcgcctccccgtc 12343230
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 6        ccacctccttctccatcccctccg 29
                |||||||||||||| |||||||||
Sbjct: 27063799 ccacctccttctccttcccctccg 27063822
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 117      atggccagcgcctccccgtc 136
                ||||||||||||||||||||
Sbjct: 35028235 atggccagcgcctccccgtc 35028216



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 117      atggccagcgcctccccgtc 136
                ||||||||||||||||||||
Sbjct: 31905209 atggccagcgcctccccgtc 31905190
to top
>gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, complete sequence
          Length = 117100

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cctccttctccatcccctcc 28
             ||||||||||||||||||||
Sbjct: 46741 cctccttctccatcccctcc 46760
to top
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1131G08
          Length = 158241

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   atggccagcgcctccccgtc 136
             ||||||||||||||||||||
Sbjct: 91287 atggccagcgcctccccgtc 91268
to top
>gb|AC025164.37| Homo sapiens 12 BAC RP11-796E2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 216841

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     acctccttctccatcccctc 27
             ||||||||||||||||||||
Sbjct: 34393 acctccttctccatcccctc 34374
to top
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485B12
          Length = 156047

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   atggccagcgcctccccgtc 136
             ||||||||||||||||||||
Sbjct: 35385 atggccagcgcctccccgtc 35366
to top
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0703B11
          Length = 144074

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   atggccagcgcctccccgtc 136
             ||||||||||||||||||||
Sbjct: 72463 atggccagcgcctccccgtc 72444
to top
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1168F12
          Length = 141524

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    atggccagcgcctccccgtc 136
              ||||||||||||||||||||
Sbjct: 126803 atggccagcgcctccccgtc 126784
to top
>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0599F09
          Length = 157415

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 117  atggccagcgcctccccgtc 136
            ||||||||||||||||||||
Sbjct: 8833 atggccagcgcctccccgtc 8814
to top
>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1211_G06
          Length = 96421

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     ccacctccttctccatcccctccg 29
             |||||||||||||| |||||||||
Sbjct: 34886 ccacctccttctccttcccctccg 34909
to top
>gb|AF135163.1|AF135163 Pseudomonas syringae pv. glycinea DnaK protein (dnaK) gene,
           complete cds
          Length = 1917

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 255 atcgacctgggcactaccaactcc 278
           ||||||||||| ||||||||||||
Sbjct: 19  atcgacctggggactaccaactcc 42
to top
>gb|AY752741.1| Mesorhizobium loti strain ATCC 33669 DnaK gene, complete cds
          Length = 1917

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 255 atcgacctgggcactaccaactcc 278
           |||||||||||||| |||||||||
Sbjct: 19  atcgacctgggcacgaccaactcc 42
to top
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     ccacctccttctccatcccctccg 29
             |||||||||||||| |||||||||
Sbjct: 80892 ccacctccttctccttcccctccg 80915
to top
>dbj|AP006543.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1250F11, complete
             sequence
          Length = 98657

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     cctccttctccatcccctcc 28
             ||||||||||||||||||||
Sbjct: 25737 cctccttctccatcccctcc 25718
to top
>gb|AF073320.1|AF073320 Streptomyces scabies strain ATCC33282 ORFtnp pseudogene, complete
           sequence; and plant pathogenicity factor (nec1) gene,
           complete cds
          Length = 1508

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcccaggtcagcgcgatggc 121
           ||||||||||||||||||||
Sbjct: 139 tcccaggtcagcgcgatggc 120
to top
>gb|AF073319.1|AF073319 Streptomyces scabies strain 87.22 ORFtnp pseudogene, complete
           sequence; and plant pathogenicity factor (nec1) gene,
           complete cds
          Length = 1485

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcccaggtcagcgcgatggc 121
           ||||||||||||||||||||
Sbjct: 139 tcccaggtcagcgcgatggc 120
to top
>gb|AF073318.1|AF073318 Streptomyces acidiscabies strain ATCC49003 ORFtnp pseudogene,
           complete sequence
          Length = 729

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcccaggtcagcgcgatggc 121
           ||||||||||||||||||||
Sbjct: 119 tcccaggtcagcgcgatggc 100
to top
>gb|AF073316.1|AF073316 Streptomyces acidiscabies strain 84.104 ORFtnp pseudogene, complete
           sequence
          Length = 749

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcccaggtcagcgcgatggc 121
           ||||||||||||||||||||
Sbjct: 139 tcccaggtcagcgcgatggc 120
to top
>gb|AF073315.1|AF073315 Streptomyces turgidiscabies strain Hi-C-13 ORFtnp pseudogene,
           complete sequence; and plant pathogenicity factor (nec1)
           gene, complete cds
          Length = 1508

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcccaggtcagcgcgatggc 121
           ||||||||||||||||||||
Sbjct: 139 tcccaggtcagcgcgatggc 120
to top
>gb|AF073314.1|AF073314 Streptomyces turgidiscabies strain Car-8 ORFtnp pseudogene,
           complete sequence; and plant pathogenicity factor (nec1)
           gene, complete cds
          Length = 1488

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcccaggtcagcgcgatggc 121
           ||||||||||||||||||||
Sbjct: 119 tcccaggtcagcgcgatggc 100
to top
>gb|AY707080.1| Streptomyces turgidiscabies pathogenicity island putative
            transposase, hypothetical protein, putative transposase
            (IS1629), and negrogenic protein (nec1) genes, putative
            transposase pseudogene, and putative resolvase/invertase
            gene, complete cds
          Length = 11000

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  tcccaggtcagcgcgatggc 121
            ||||||||||||||||||||
Sbjct: 5002 tcccaggtcagcgcgatggc 5021
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>gb|AC111107.18| Mus musculus chromosome 5, clone RP23-195P3, complete sequence
          Length = 203785

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cctccttctccatcccctcc 28
             ||||||||||||||||||||
Sbjct: 45210 cctccttctccatcccctcc 45229
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 106     aggtcagcgcgatggccagc 125
               ||||||||||||||||||||
Sbjct: 5957118 aggtcagcgcgatggccagc 5957137
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>dbj|AP006183.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1169H7, complete
              sequence
          Length = 158699

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      cctccttctccatcccctcc 28
              ||||||||||||||||||||
Sbjct: 149583 cctccttctccatcccctcc 149564
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 255     atcgacctgggcactaccaactcc 278
               |||||||||||||| |||||||||
Sbjct: 1779303 atcgacctgggcaccaccaactcc 1779326
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   ttgctcgtggcgggcggcca 212
             ||||||||||||||||||||
Sbjct: 27048 ttgctcgtggcgggcggcca 27067
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>gb|AF031232.1|AF031232 Streptomyces scabies transposase pseudogene, partial sequence;
           plant pathogenicity factor (nec1) gene, complete cds;
           and unknown gene
          Length = 2406

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 102 tcccaggtcagcgcgatggc 121
           ||||||||||||||||||||
Sbjct: 291 tcccaggtcagcgcgatggc 272
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>emb|AL606962.22| Mouse DNA sequence from clone RP23-29H22 on chromosome 4, complete
              sequence
          Length = 223854

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      cccacctccttctccatccc 24
              ||||||||||||||||||||
Sbjct: 103474 cccacctccttctccatccc 103455
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>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0460E08
          Length = 170021

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 117  atggccagcgcctccccgtc 136
            ||||||||||||||||||||
Sbjct: 1936 atggccagcgcctccccgtc 1917


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,539,396
Number of Sequences: 3902068
Number of extensions: 2539396
Number of successful extensions: 66788
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 64918
Number of HSP's gapped (non-prelim): 1870
length of query: 382
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 360
effective length of database: 17,147,199,772
effective search space: 6172991917920
effective search space used: 6172991917920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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