ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal16m20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191971.1| Oryza sativa (japonica cultivar-group), predic... 521 e-145
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 325 8e-86
3dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic D... 325 8e-86
4dbj|AK121237.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
5gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome... 168 1e-38
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
7dbj|AK059222.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 8e-09
8gb|AC151527.13| Medicago truncatula clone mth2-135i19, complete ... 64 5e-07
9ref|NM_102610.2| Arabidopsis thaliana HB-1; transcription factor... 48 0.029
10dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.45
11gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.45
12ref|NM_123785.1| Arabidopsis thaliana transcription factor AT5G4... 42 1.8
13ref|XM_381602.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 42 1.8
14emb|AL353681.8| Human DNA sequence from clone RP1-158P9 on chrom... 42 1.8
15gb|AC091151.11| Homo sapiens chromosome 18, clone RP11-749H17, c... 42 1.8
16gb|AC021517.9| Homo sapiens chromosome 18, clone RP11-309E23, co... 42 1.8
17gb|AC017047.4|AC017047 Homo sapiens BAC clone RP11-323F10 from X... 42 1.8
18gb|AC011816.17|AC011816 Homo sapiens chromosome 3, clone RP11-12... 42 1.8
19gb|AC010155.3|AC010155 Genomic sequence for Arabidopsis thaliana... 42 1.8
20gb|AC101547.9| Mus musculus chromosome 5, clone RP23-193C5, comp... 42 1.8
21gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence 40 7.0
22gb|BT016708.1| Zea mays clone Contig541 mRNA sequence 40 7.0
23gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence 40 7.0
24gb|BT016274.1| Zea mays clone Contig107 mRNA sequence 40 7.0
25gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, com... 40 7.0
26ref|XM_453387.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D07304g ... 40 7.0
27gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiq... 40 7.0
28gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome... 40 7.0
29ref|XM_543204.2| PREDICTED: Canis familiaris similar to nei-like... 40 7.0
30ref|XM_447312.1| Candida glabrata CBS138 hypothetical protein (C... 40 7.0
31emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial ... 40 7.0
32gb|AC103576.8| Rattus norvegicus 12 BAC CH230-63N13 (Children's ... 40 7.0
33emb|AL589790.22| Human DNA sequence from clone GS1-118I5 on chro... 40 7.0
34ref|XM_795409.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 7.0
35emb|AL162373.16| Human DNA sequence from clone RP11-272M24 on ch... 40 7.0
36emb|AL050342.42|HSDJ655K7 Human DNA sequence from clone RP4-655K... 40 7.0
37emb|AL034403.19|HS31B8 Human DNA sequence from clone RP1-31B8 on... 40 7.0
38emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 7.0
39emb|CR380955.1| Candida glabrata strain CBS138 chromosome I comp... 40 7.0
40emb|AJ620209.1| Human papillomavirus type 81 complete genome 40 7.0
41gb|AC144374.5| Gallus gallus strain White Leghorn clone xx-37d21... 40 7.0
42gb|AC087506.7| Homo sapiens chromosome 18, clone RP11-726O24, co... 40 7.0
43gb|AC022174.6| Homo sapiens chromosome 18, clone RP11-489I20, co... 40 7.0
44gb|AC078991.21| Homo sapiens Xp BAC RP11-459A10 (Roswell Park Ca... 40 7.0
45dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
46emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 7.0
47gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA ... 40 7.0
48gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA... 40 7.0
49gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subu... 40 7.0 
>ref|NM_191971.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 5373

 Score =  521 bits (263), Expect = e-145
 Identities = 388/429 (90%), Gaps = 3/429 (0%)
 Strand = Plus / Plus

                                                                        
Query: 25   atggtcagaatgtcatatccactctccgaaatggttcagcagccgtgcgtgctgccgctc 84
            |||||||| | ||||||||||| |||||||||||||||||||| |||| |||||| ||| 
Sbjct: 2420 atggtcaggacgtcatatccaccctccgaaatggttcagcagctgtgcatgctgctgctt 2479

                                                                        
Query: 85   tgatgaaagaaagaggctacacccatcgtcg---atctcggcaccgcctcactcccggga 141
            |||||||||||||||||||||||||||| ||   |||||||||||| |||||||| || |
Sbjct: 2480 tgatgaaagaaagaggctacacccatcgccgtagatctcggcaccgtctcactcctggta 2539

                                                                        
Query: 142  cggtaaaatttgctgctttccatgtgctttctcttgaagatagcagtggtctcacaatat 201
            | |||||||||||||||||||||||||| || |||||||  || |  |||||||| ||||
Sbjct: 2540 ccgtaaaatttgctgctttccatgtgctgtcccttgaaggaagtaaaggtctcacgatat 2599

                                                                        
Query: 202  tggaagttgcagagaaaatccagaaatctggactcagagatcttaccacaagcaagacac 261
            ||||||||||||| | |||||||||||||||| | ||||| || || ||||||||||| |
Sbjct: 2600 tggaagttgcagaaagaatccagaaatctggattgagagacctcacaacaagcaagacgc 2659

                                                                        
Query: 262  ctgaggcatctatagctgctgccttgtcaagggatacaaaactttttgagcgaactgctc 321
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2660 ctgaggcatctatagctgctgccttgtcaagggatacaaaactttttgagcgaactgctc 2719

                                                                        
Query: 322  cctcaacatattgtgtaaagtccccttacagaaaagatccagctgagtctgaggctgtgt 381
            | |||||||| ||||| ||||||||||| ||||||||||||||||| ||||||| |||| 
Sbjct: 2720 cttcaacatactgtgtcaagtccccttatagaaaagatccagctgattctgaggttgtgc 2779

                                                                        
Query: 382  tgtcatcagcacgtgaaaaaattagggcttttcagaatgtgctgtctgactctgaagctg 441
            ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 2780 tgtcatcagcacgtgaaaaaattagggcttttcagaatgtgatttctgactctgaagctg 2839

                     
Query: 442  aaaaagagg 450
            |||| ||||
Sbjct: 2840 aaaaggagg 2848



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 491  tgatgatgatcctgacggtgatgatgtga 519
            ||||||||||||||| |||||||||||||
Sbjct: 2892 tgatgatgatcctgatggtgatgatgtga 2920
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  325 bits (164), Expect = 8e-86
 Identities = 212/228 (92%)
 Strand = Plus / Plus

                                                                            
Query: 223      agaaatctggactcagagatcttaccacaagcaagacacctgaggcatctatagctgctg 282
                ||||||||||| | ||||| || || ||||||||||| ||||||||||||||||||||||
Sbjct: 27585639 agaaatctggattgagagacctcacaacaagcaagacgcctgaggcatctatagctgctg 27585698

                                                                            
Query: 283      ccttgtcaagggatacaaaactttttgagcgaactgctccctcaacatattgtgtaaagt 342
                |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 27585699 ccttgtcaagggatacaaaactttttgagcgaactgctccttcaacatactgtgtcaagt 27585758

                                                                            
Query: 343      ccccttacagaaaagatccagctgagtctgaggctgtgttgtcatcagcacgtgaaaaaa 402
                ||||||| ||||||||||||||||| ||||||| |||| |||||||||||||||||||||
Sbjct: 27585759 ccccttatagaaaagatccagctgattctgaggttgtgctgtcatcagcacgtgaaaaaa 27585818

                                                                
Query: 403      ttagggcttttcagaatgtgctgtctgactctgaagctgaaaaagagg 450
                |||||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 27585819 ttagggcttttcagaatgtgatttctgactctgaagctgaaaaggagg 27585866



 Score =  200 bits (101), Expect = 3e-48
 Identities = 178/203 (87%), Gaps = 3/203 (1%)
 Strand = Plus / Plus

                                                                            
Query: 25       atggtcagaatgtcatatccactctccgaaatggttcagcagccgtgcgtgctgccgctc 84
                |||||||| | ||||||||||| |||||||||||||||||||| |||| |||||| ||| 
Sbjct: 27585343 atggtcaggacgtcatatccaccctccgaaatggttcagcagctgtgcatgctgctgctt 27585402

                                                                            
Query: 85       tgatgaaagaaagaggctacacccat---cgtcgatctcggcaccgcctcactcccggga 141
                ||||||||||||||||||||||||||   ||| ||||||||||||| |||||||| || |
Sbjct: 27585403 tgatgaaagaaagaggctacacccatcgccgtagatctcggcaccgtctcactcctggta 27585462

                                                                            
Query: 142      cggtaaaatttgctgctttccatgtgctttctcttgaagatagcagtggtctcacaatat 201
                | |||||||||||||||||||||||||| || |||||||  || |  |||||||| ||||
Sbjct: 27585463 ccgtaaaatttgctgctttccatgtgctgtcccttgaaggaagtaaaggtctcacgatat 27585522

                                       
Query: 202      tggaagttgcagagaaaatccag 224
                ||||||||||||| | |||||||
Sbjct: 27585523 tggaagttgcagaaagaatccag 27585545



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 491      tgatgatgatcctgacggtgatgatgtga 519
                ||||||||||||||| |||||||||||||
Sbjct: 27585910 tgatgatgatcctgatggtgatgatgtga 27585938



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 237      agagatcttaccacaagcaagaca 260
                ||||||||||||| ||||||||||
Sbjct: 37571903 agagatcttaccagaagcaagaca 37571880
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>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0007F06
          Length = 150817

 Score =  325 bits (164), Expect = 8e-86
 Identities = 212/228 (92%)
 Strand = Plus / Plus

                                                                         
Query: 223   agaaatctggactcagagatcttaccacaagcaagacacctgaggcatctatagctgctg 282
             ||||||||||| | ||||| || || ||||||||||| ||||||||||||||||||||||
Sbjct: 52933 agaaatctggattgagagacctcacaacaagcaagacgcctgaggcatctatagctgctg 52992

                                                                         
Query: 283   ccttgtcaagggatacaaaactttttgagcgaactgctccctcaacatattgtgtaaagt 342
             |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||
Sbjct: 52993 ccttgtcaagggatacaaaactttttgagcgaactgctccttcaacatactgtgtcaagt 53052

                                                                         
Query: 343   ccccttacagaaaagatccagctgagtctgaggctgtgttgtcatcagcacgtgaaaaaa 402
             ||||||| ||||||||||||||||| ||||||| |||| |||||||||||||||||||||
Sbjct: 53053 ccccttatagaaaagatccagctgattctgaggttgtgctgtcatcagcacgtgaaaaaa 53112

                                                             
Query: 403   ttagggcttttcagaatgtgctgtctgactctgaagctgaaaaagagg 450
             |||||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct: 53113 ttagggcttttcagaatgtgatttctgactctgaagctgaaaaggagg 53160



 Score =  200 bits (101), Expect = 3e-48
 Identities = 178/203 (87%), Gaps = 3/203 (1%)
 Strand = Plus / Plus

                                                                         
Query: 25    atggtcagaatgtcatatccactctccgaaatggttcagcagccgtgcgtgctgccgctc 84
             |||||||| | ||||||||||| |||||||||||||||||||| |||| |||||| ||| 
Sbjct: 52637 atggtcaggacgtcatatccaccctccgaaatggttcagcagctgtgcatgctgctgctt 52696

                                                                         
Query: 85    tgatgaaagaaagaggctacacccat---cgtcgatctcggcaccgcctcactcccggga 141
             ||||||||||||||||||||||||||   ||| ||||||||||||| |||||||| || |
Sbjct: 52697 tgatgaaagaaagaggctacacccatcgccgtagatctcggcaccgtctcactcctggta 52756

                                                                         
Query: 142   cggtaaaatttgctgctttccatgtgctttctcttgaagatagcagtggtctcacaatat 201
             | |||||||||||||||||||||||||| || |||||||  || |  |||||||| ||||
Sbjct: 52757 ccgtaaaatttgctgctttccatgtgctgtcccttgaaggaagtaaaggtctcacgatat 52816

                                    
Query: 202   tggaagttgcagagaaaatccag 224
             ||||||||||||| | |||||||
Sbjct: 52817 tggaagttgcagaaagaatccag 52839



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 491   tgatgatgatcctgacggtgatgatgtga 519
             ||||||||||||||| |||||||||||||
Sbjct: 53204 tgatgatgatcctgatggtgatgatgtga 53232
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>dbj|AK121237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095K21, full
            insert sequence
          Length = 4430

 Score =  220 bits (111), Expect = 3e-54
 Identities = 234/275 (85%)
 Strand = Plus / Plus

                                                                        
Query: 144  gtaaaatttgctgctttccatgtgctttctcttgaagatagcagtggtctcacaatattg 203
            ||||| |||||||| ||||||||| | || |||||||  |||   |||||||| ||||||
Sbjct: 1026 gtaaagtttgctgcgttccatgtgttgtcacttgaagggagccaaggtctcacgatattg 1085

                                                                        
Query: 204  gaagttgcagagaaaatccagaaatctggactcagagatcttaccacaagcaagacacct 263
            ||||||||||| ||||| |||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 1086 gaagttgcagaaaaaatacagaaatctggactgagagaccttacaacaagcaagacacct 1145

                                                                        
Query: 264  gaggcatctatagctgctgccttgtcaagggatacaaaactttttgagcgaactgctccc 323
            |||||||||||| |||||||  ||||||||||| |||| ||||| ||  | ||||| || 
Sbjct: 1146 gaggcatctatatctgctgcactgtcaagggattcaaagcttttcgaaaggactgcacct 1205

                                                                        
Query: 324  tcaacatattgtgtaaagtccccttacagaaaagatccagctgagtctgaggctgtgttg 383
            |||||||| ||||| ||  | || |||||||||||||| ||||| || ||||||||||||
Sbjct: 1206 tcaacatactgtgttaaaactccatacagaaaagatcctgctgattcagaggctgtgttg 1265

                                               
Query: 384  tcatcagcacgtgaaaaaattagggcttttcagaa 418
             || |||||||||||||||| ||||  ||||||||
Sbjct: 1266 gcagcagcacgtgaaaaaataagggtgtttcagaa 1300
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>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06,
              complete sequence
          Length = 139139

 Score =  168 bits (85), Expect = 1e-38
 Identities = 169/197 (85%)
 Strand = Plus / Minus

                                                                          
Query: 222    cagaaatctggactcagagatcttaccacaagcaagacacctgaggcatctatagctgct 281
              |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| |||||
Sbjct: 124933 cagaaatctggactgagagaccttacaacaagcaagacacctgaggcatctatatctgct 124874

                                                                          
Query: 282    gccttgtcaagggatacaaaactttttgagcgaactgctccctcaacatattgtgtaaag 341
              ||  ||||||||||| |||| ||||| ||  | ||||| || |||||||| ||||| || 
Sbjct: 124873 gcactgtcaagggattcaaagcttttcgaaaggactgcaccttcaacatactgtgttaaa 124814

                                                                          
Query: 342    tccccttacagaaaagatccagctgagtctgaggctgtgttgtcatcagcacgtgaaaaa 401
               | || |||||||||||||| ||||| || |||||||||||| || ||||||||||||||
Sbjct: 124813 actccatacagaaaagatcctgctgattcagaggctgtgttggcagcagcacgtgaaaaa 124754

                               
Query: 402    attagggcttttcagaa 418
              || ||||  ||||||||
Sbjct: 124753 ataagggtgtttcagaa 124737



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                          
Query: 144    gtaaaatttgctgctttccatgtgctttctcttgaagatagcagtggtctcacaatattg 203
              ||||| |||||||| ||||||||| | || |||||||  |||   |||||||| ||||||
Sbjct: 125087 gtaaagtttgctgcgttccatgtgttgtcacttgaagggagccaaggtctcacgatattg 125028

                               
Query: 204    gaagttgcagagaaaat 220
              ||||||||||| |||||
Sbjct: 125027 gaagttgcagaaaaaat 125011
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  168 bits (85), Expect = 1e-38
 Identities = 169/197 (85%)
 Strand = Plus / Minus

                                                                            
Query: 222      cagaaatctggactcagagatcttaccacaagcaagacacctgaggcatctatagctgct 281
                |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| |||||
Sbjct: 27760375 cagaaatctggactgagagaccttacaacaagcaagacacctgaggcatctatatctgct 27760316

                                                                            
Query: 282      gccttgtcaagggatacaaaactttttgagcgaactgctccctcaacatattgtgtaaag 341
                ||  ||||||||||| |||| ||||| ||  | ||||| || |||||||| ||||| || 
Sbjct: 27760315 gcactgtcaagggattcaaagcttttcgaaaggactgcaccttcaacatactgtgttaaa 27760256

                                                                            
Query: 342      tccccttacagaaaagatccagctgagtctgaggctgtgttgtcatcagcacgtgaaaaa 401
                 | || |||||||||||||| ||||| || |||||||||||| || ||||||||||||||
Sbjct: 27760255 actccatacagaaaagatcctgctgattcagaggctgtgttggcagcagcacgtgaaaaa 27760196

                                 
Query: 402      attagggcttttcagaa 418
                || ||||  ||||||||
Sbjct: 27760195 ataagggtgtttcagaa 27760179



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                            
Query: 144      gtaaaatttgctgctttccatgtgctttctcttgaagatagcagtggtctcacaatattg 203
                ||||| |||||||| ||||||||| | || |||||||  |||   |||||||| ||||||
Sbjct: 27760529 gtaaagtttgctgcgttccatgtgttgtcacttgaagggagccaaggtctcacgatattg 27760470

                                 
Query: 204      gaagttgcagagaaaat 220
                ||||||||||| |||||
Sbjct: 27760469 gaagttgcagaaaaaat 27760453
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>dbj|AK059222.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D04, full
           insert sequence
          Length = 1985

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 348 tacagaaaagatccagctgagtctgaggctgtgttgtcatcagcacgtgaaaaaattagg 407
           |||||||||||||| ||||| || |||||||||||| || |||||||| ||||||| |||
Sbjct: 11  tacagaaaagatcctgctgattcagaggctgtgttggcagcagcacgtaaaaaaataagg 70

                      
Query: 408 gcttttcagaa 418
           |  ||||||||
Sbjct: 71  gtgtttcagaa 81
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>gb|AC151527.13| Medicago truncatula clone mth2-135i19, complete sequence
          Length = 132470

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                          
Query: 223    agaaatctggactcagagatcttaccacaagcaagacacctgaggcatctatagctgctg 282
              |||||||||||||  | |||||||| ||||||||  |||| |||||  |||| ||| |||
Sbjct: 126172 agaaatctggacttcgtgatcttacaacaagcaaatcaccagaggctgctattgcttctg 126113

                                                                      
Query: 283    ccttgtcaagggatacaaaactttttgagcgaactgctccctcaacatattgtgta 338
              | ||||| || |||||| |||| |||||  | || ||||| |||||||||||||||
Sbjct: 126112 ctttgtctagagatacagaactatttgaaaggacagctccttcaacatattgtgta 126057
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>ref|NM_102610.2| Arabidopsis thaliana HB-1; transcription factor AT1G28420 (HB-1)
            mRNA, complete cds
          Length = 5290

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 102/128 (79%)
 Strand = Plus / Plus

                                                                        
Query: 147  aaatttgctgctttccatgtgctttctcttgaagatagcagtggtctcacaatattggaa 206
            |||||||| || || ||||| || ||||||||||  ||||  || || ||| |||| |||
Sbjct: 2194 aaatttgcagcctttcatgttctatctcttgaaggaagcaagggactgacagtattagaa 2253

                                                                        
Query: 207  gttgcagagaaaatccagaaatctggactcagagatcttaccacaagcaagacacctgag 266
             |||| || || || ||||||||||||||  | ||  | ||||||||||||||||| |||
Sbjct: 2254 cttgctgacaagattcagaaatctggacttcgggacttgaccacaagcaagacaccagag 2313

                    
Query: 267  gcatctat 274
            || |||||
Sbjct: 2314 gcttctat 2321
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 488     ttgtgatgatgatcctgacggtgatg 513
               |||||||| |||||||||||||||||
Sbjct: 5003640 ttgtgatggtgatcctgacggtgatg 5003615
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 488     ttgtgatgatgatcctgacggtgatg 513
               |||||||| |||||||||||||||||
Sbjct: 5023276 ttgtgatggtgatcctgacggtgatg 5023251
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>ref|NM_123785.1| Arabidopsis thaliana transcription factor AT5G44180 mRNA, complete
            cds
          Length = 5224

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 84/105 (80%)
 Strand = Plus / Plus

                                                                        
Query: 207  gttgcagagaaaatccagaaatctggactcagagatcttaccacaagcaagacacctgag 266
            ||||||||||| || |||||||| ||| | || ||||| || || || | ||||||||| 
Sbjct: 2155 gttgcagagaagattcagaaatcaggattgagggatctaacgacgagtaggacacctgaa 2214

                                                         
Query: 267  gcatctatagctgctgccttgtcaagggatacaaaactttttgag 311
            || ||  | |||||||| |||||  | ||||||||||| ||||||
Sbjct: 2215 gcctcggttgctgctgcgttgtctcgagatacaaaactctttgag 2259
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>ref|XM_381602.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01426.1)
           partial mRNA
          Length = 1458

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 207 gttgcagagaaaatccagaaatctg 231
           |||| ||||||||||||||||||||
Sbjct: 124 gttgaagagaaaatccagaaatctg 148
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>emb|AL353681.8| Human DNA sequence from clone RP1-158P9 on chromosome 1 Contains a
             novel gene and a pseudogene, complete sequence
          Length = 113539

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 460   atgatgttgatagagaccagg 480
             |||||||||||||||||||||
Sbjct: 23668 atgatgttgatagagaccagg 23688
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>gb|AC091151.11| Homo sapiens chromosome 18, clone RP11-749H17, complete sequence
          Length = 170085

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 415  agaatgtgctgtctgactctg 435
            |||||||||||||||||||||
Sbjct: 9585 agaatgtgctgtctgactctg 9565
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>gb|AC021517.9| Homo sapiens chromosome 18, clone RP11-309E23, complete sequence
          Length = 160904

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 415   agaatgtgctgtctgactctg 435
             |||||||||||||||||||||
Sbjct: 75712 agaatgtgctgtctgactctg 75732
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>gb|AC017047.4|AC017047 Homo sapiens BAC clone RP11-323F10 from X, complete sequence
          Length = 180322

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 488   ttgtgatgatgatcctgacggtgatgatg 516
             |||||||||||||| ||| ||||||||||
Sbjct: 97436 ttgtgatgatgatcatgatggtgatgatg 97464
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>gb|AC011816.17|AC011816 Homo sapiens chromosome 3, clone RP11-129K12, complete sequence
          Length = 169313

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 212   agagaaaatccagaaatctgg 232
             |||||||||||||||||||||
Sbjct: 89131 agagaaaatccagaaatctgg 89151
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>gb|AC010155.3|AC010155 Genomic sequence for Arabidopsis thaliana BAC F3M18 from chromosome I,
             complete sequence
          Length = 104163

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 246   accacaagcaagacacctgaggcatctat 274
             ||||||||||||||||| ||||| |||||
Sbjct: 57725 accacaagcaagacaccagaggcttctat 57697
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>gb|AC101547.9| Mus musculus chromosome 5, clone RP23-193C5, complete sequence
          Length = 185061

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 169    tttctcttgaagatagcagtg 189
              |||||||||||||||||||||
Sbjct: 126710 tttctcttgaagatagcagtg 126690
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>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence
          Length = 1395069

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    catcgtcgatctcggcaccg 127
              ||||||||||||||||||||
Sbjct: 565326 catcgtcgatctcggcaccg 565345
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>gb|BT016708.1| Zea mays clone Contig541 mRNA sequence
          Length = 1331

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  tgccgattcggcacgaggcc 20
          ||||||||||||||||||||
Sbjct: 27 tgccgattcggcacgaggcc 8
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>gb|BT018175.1| Zea mays clone EL01N0557C11.c mRNA sequence
          Length = 780

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  tgccgattcggcacgaggcc 20
          ||||||||||||||||||||
Sbjct: 26 tgccgattcggcacgaggcc 7
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>gb|BT016274.1| Zea mays clone Contig107 mRNA sequence
          Length = 1486

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   tgccgattcggcacgaggcc 20
           ||||||||||||||||||||
Sbjct: 491 tgccgattcggcacgaggcc 472
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>gb|AY190742.1| Pagrus major 40S ribosomal protein S15A mRNA, complete cds
          Length = 568

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   tgccgattcggcacgaggcc 20
           ||||||||||||||||||||
Sbjct: 101 tgccgattcggcacgaggcc 82
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>ref|XM_453387.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D07304g predicted mRNA
          Length = 1398

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 189  ggtctcacaatattggaagttgca 212
            ||||||||| ||||||||||||||
Sbjct: 1096 ggtctcacactattggaagttgca 1119
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>gb|AY549572.1| Chlamydomonas reinhardtii mitochondrial NADH:ubiquinone
          oxidoreductase 10 kDa subunit precursor mRNA, complete
          cds; nuclear gene for mitochondrial product
          Length = 868

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  tgccgattcggcacgaggcc 20
          ||||||||||||||||||||
Sbjct: 25 tgccgattcggcacgaggcc 6
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>gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome 18, complete sequence
          Length = 161099

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   gaagttgcagagaaaatcca 223
             ||||||||||||||||||||
Sbjct: 99488 gaagttgcagagaaaatcca 99507
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>ref|XM_543204.2| PREDICTED: Canis familiaris similar to nei-like 2 (LOC486078), mRNA
          Length = 2256

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 153  gctgctttccatgtgctttc 172
            ||||||||||||||||||||
Sbjct: 1835 gctgctttccatgtgctttc 1816
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>ref|XM_447312.1| Candida glabrata CBS138 hypothetical protein (CAGL0I01320g) partial
            mRNA
          Length = 1503

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 110  tcgtcgatctcggcaccgcc 129
            ||||||||||||||||||||
Sbjct: 1331 tcgtcgatctcggcaccgcc 1312
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>emb|AJ619759.1| Polytomella sp. Pringsheim 198.80 mitochondrial atp3 gene for ATP
          synthase gamma chain, mitochondrial precursor
          Length = 1225

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  tgccgattcggcacgaggcc 20
          ||||||||||||||||||||
Sbjct: 27 tgccgattcggcacgaggcc 8
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>gb|AC103576.8| Rattus norvegicus 12 BAC CH230-63N13 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 219287

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 489   tgtgatgatgatcctgacggtgatgatg 516
             ||||||||| ||| ||||||||||||||
Sbjct: 47002 tgtgatgataatcatgacggtgatgatg 46975
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>emb|AL589790.22| Human DNA sequence from clone GS1-118I5 on chromosome 1 Contains the
            3' end of the gene for barttin (BSND) and the 5' end of
            the PCSK9 gene for proprotein convertase subtilisin/kexin
            type 9, complete sequence
          Length = 46075

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 485  tgattgtgatgatgatcctgacggtgatgatg 516
            |||| |||||||||||  ||||||||||||||
Sbjct: 2912 tgatagtgatgatgatggtgacggtgatgatg 2943
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>ref|XM_795409.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC588370 (LOC588370), mRNA
          Length = 525

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 485 tgattgtgatgatgatcctgacggtgatgatg 516
           ||||||||||||||||  ||| ||||||||||
Sbjct: 186 tgattgtgatgatgatgatgatggtgatgatg 217
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>emb|AL162373.16| Human DNA sequence from clone RP11-272M24 on chromosome 13 Contains a
              novel pseudogene, complete sequence
          Length = 176797

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    ttacagaaaagatccagctg 366
              ||||||||||||||||||||
Sbjct: 146122 ttacagaaaagatccagctg 146103
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>emb|AL050342.42|HSDJ655K7 Human DNA sequence from clone RP4-655K7 on chromosome 1p35.3-36.13
             Contains part of a gene encoding a novel protein,,
             complete sequence
          Length = 116857

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 423   ctgtctgactctgaagctga 442
             ||||||||||||||||||||
Sbjct: 96587 ctgtctgactctgaagctga 96606
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>emb|AL034403.19|HS31B8 Human DNA sequence from clone RP1-31B8 on chromosome Xq22.2-23
            Contains a glyceraldehyde-3-phosphate dehydrogenase
            (GAPD) pseudogene, complete sequence
          Length = 68334

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 347  ttacagaaaagatccagctg 366
            ||||||||||||||||||||
Sbjct: 7172 ttacagaaaagatccagctg 7191
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>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1715506

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 189    ggtctcacaatattggaagttgca 212
              ||||||||| ||||||||||||||
Sbjct: 624447 ggtctcacactattggaagttgca 624470
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>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence
          Length = 1089401

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 110    tcgtcgatctcggcaccgcc 129
              ||||||||||||||||||||
Sbjct: 107940 tcgtcgatctcggcaccgcc 107959
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>emb|AJ620209.1| Human papillomavirus type 81 complete genome
          Length = 8070

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 445 aagaggtggatgtggatgat 464
           ||||||||||||||||||||
Sbjct: 642 aagaggtggatgtggatgat 661
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>gb|AC144374.5| Gallus gallus strain White Leghorn clone xx-37d21, complete sequence
          Length = 141874

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ttctcttgaagatagcagtg 189
             ||||||||||||||||||||
Sbjct: 58718 ttctcttgaagatagcagtg 58699
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>gb|AC087506.7| Homo sapiens chromosome 18, clone RP11-726O24, complete sequence
          Length = 169753

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   ttacagaaaagatccagctg 366
             ||||||||||||||||||||
Sbjct: 42276 ttacagaaaagatccagctg 42257
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>gb|AC022174.6| Homo sapiens chromosome 18, clone RP11-489I20, complete sequence
          Length = 162881

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 347   ttacagaaaagatccagctg 366
             ||||||||||||||||||||
Sbjct: 40368 ttacagaaaagatccagctg 40349
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>gb|AC078991.21| Homo sapiens Xp BAC RP11-459A10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 169819

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 485   tgattgtgatgatgatcctgacggtgatgatg 516
             ||||||||||||||||| ||| | ||||||||
Sbjct: 51156 tgattgtgatgatgatcgtgatgatgatgatg 51125
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>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0677H08
          Length = 178830

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 237   agagatcttaccacaagcaagaca 260
             ||||||||||||| ||||||||||
Sbjct: 32377 agagatcttaccagaagcaagaca 32354
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 59     ttcagcagccgtgcgtgctgccgc 82
              |||||||||||||| |||||||||
Sbjct: 810357 ttcagcagccgtgcctgctgccgc 810334
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>gb|BC002897.2| Homo sapiens zinc finger protein 343, mRNA (cDNA clone
          IMAGE:3940750), complete cds
          Length = 847

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  tgccgattcggcacgaggcc 20
          ||||||||||||||||||||
Sbjct: 6  tgccgattcggcacgaggcc 25
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>gb|AY609483.1| Sus scrofa clone Clu_131.scr.msk.p1.Contig2, mRNA sequence
          Length = 1502

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    tgccgattcggcacgaggcc 20
            ||||||||||||||||||||
Sbjct: 1403 tgccgattcggcacgaggcc 1422
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>gb|AY620960.1| Pennisetum glaucum truncated vacuolar ATPase subunit c isoform
          mRNA, partial cds
          Length = 911

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 1  tgccgattcggcacgaggcc 20
          ||||||||||||||||||||
Sbjct: 28 tgccgattcggcacgaggcc 9


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,250,497
Number of Sequences: 3902068
Number of extensions: 5250497
Number of successful extensions: 101358
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101046
Number of HSP's gapped (non-prelim): 305
length of query: 519
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 496
effective length of database: 17,143,297,704
effective search space: 8503075661184
effective search space used: 8503075661184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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