ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal17b17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine pro... 432 e-118
2gb|AC102841.7| Mus musculus chromosome 7, clone RP24-371C6, comp... 42 0.75
3gb|AC156987.7| Mus musculus chromosome 7, clone RP23-78K13, comp... 42 0.75
4emb|BX005387.7| Zebrafish DNA sequence from clone DKEY-97G16 in ... 42 0.75
5gb|AF290177.1|AF290177 Candida albicans imidazole glycerol phosp... 42 0.75
6dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, comp... 42 0.75
7emb|CR318614.7| Zebrafish DNA sequence from clone DKEY-24L7 in l... 40 3.0
8gb|AC108943.4| Mus musculus BAC clone RP23-66D23 from chromosome... 40 3.0
9gb|AY593803.1| Foot-and-mouth disease virus A isolate avenceslau... 40 3.0
10emb|AL929434.3| Zebrafish DNA sequence from clone CH211-127L15, ... 40 3.0
11gb|AC103663.15| Mus musculus chromosome 1, clone RP23-219O12, co... 40 3.0
12gb|AY863213.1| Smittium culisetae mitochondrion, complete genome 40 3.0

>emb|Z97022.1|HVZ97022 Hordeum vulgare gene encoding cysteine proteinase
          Length = 5593

 Score =  432 bits (218), Expect = e-118
 Identities = 220/221 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgataaatagctactgtgacgacccaagcaagtacagtatgtgcggggttgtttgtattg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5088 tgataaatagctactgtgacgacccaagcaagtacagtatgtgcggggttgtttgtattg 5147

                                                                        
Query: 61   tatacgtagctgcgtgtgcatttatcatgaaatcatgatgaatttgtacagattggcttg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5148 tatacgtagctgcgtgtgcatttatcatgaaatcatgatgaatttgtacagattggcttg 5207

                                                                        
Query: 121  naggaagttgtgactacagaacatgtattgggttgcatatttcaccgcaaaggaaatata 180
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5208 taggaagttgtgactacagaacatgtattgggttgcatatttcaccgcaaaggaaatata 5267

                                                     
Query: 181  tatacagaagacgtattggattgcgtacttcaccgttgcat 221
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5268 tatacagaagacgtattggattgcgtacttcaccgttgcat 5308



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>gb|AC102841.7| Mus musculus chromosome 7, clone RP24-371C6, complete sequence
          Length = 162151

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   gcatatttcaccgcaaaggaa 175
             |||||||||||||||||||||
Sbjct: 81299 gcatatttcaccgcaaaggaa 81279



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>gb|AC156987.7| Mus musculus chromosome 7, clone RP23-78K13, complete sequence
          Length = 231140

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 155  gcatatttcaccgcaaaggaa 175
            |||||||||||||||||||||
Sbjct: 5544 gcatatttcaccgcaaaggaa 5564



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>emb|BX005387.7| Zebrafish DNA sequence from clone DKEY-97G16 in linkage group 7, complete
              sequence
          Length = 152617

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 87     atgaaatcatgatgaatttgtacagattg 115
              |||||||| ||||||||||||||| ||||
Sbjct: 120210 atgaaatcttgatgaatttgtacaaattg 120182



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>gb|AF290177.1|AF290177 Candida albicans imidazole glycerol phosphate synthase (HIS7) gene,
            complete cds
          Length = 2306

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 176  atatatatacagaagacgtattgga 200
            |||||||||||||||| ||||||||
Sbjct: 2094 atatatatacagaagatgtattgga 2118



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>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence
          Length = 949626

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 176    atatatatacagaagacgtattgga 200
              |||||||||||||||| ||||||||
Sbjct: 827979 atatatatacagaagatgtattgga 827955



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>emb|CR318614.7| Zebrafish DNA sequence from clone DKEY-24L7 in linkage group 23,
             complete sequence
          Length = 79471

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 88    tgaaatcatgatgaatttgtacagattg 115
             ||||||| ||||||||||||||| ||||
Sbjct: 25931 tgaaatcttgatgaatttgtacaaattg 25904



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>gb|AC108943.4| Mus musculus BAC clone RP23-66D23 from chromosome 18, complete sequence
          Length = 191642

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     gtgtgcatttatcatgaaat 93
              ||||||||||||||||||||
Sbjct: 174573 gtgtgcatttatcatgaaat 174554



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>gb|AY593803.1| Foot-and-mouth disease virus A isolate avenceslau iso70, complete
            genome
          Length = 8199

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   tgacgacccaagcaagtaca 36
            ||||||||||||||||||||
Sbjct: 4588 tgacgacccaagcaagtaca 4607



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>emb|AL929434.3| Zebrafish DNA sequence from clone CH211-127L15, complete sequence
          Length = 178948

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    atgaaatcatgatgaatttg 106
             ||||||||||||||||||||
Sbjct: 35413 atgaaatcatgatgaatttg 35394



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>gb|AC103663.15| Mus musculus chromosome 1, clone RP23-219O12, complete sequence
          Length = 212662

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   aaggaaatatatatacagaa 189
             ||||||||||||||||||||
Sbjct: 72867 aaggaaatatatatacagaa 72848



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>gb|AY863213.1| Smittium culisetae mitochondrion, complete genome
          Length = 58654

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 170  aaggaaatatatatacagaa 189
            ||||||||||||||||||||
Sbjct: 8567 aaggaaatatatatacagaa 8548


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,555,437
Number of Sequences: 3902068
Number of extensions: 2555437
Number of successful extensions: 37993
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37975
Number of HSP's gapped (non-prelim): 18
length of query: 231
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 209
effective length of database: 17,147,199,772
effective search space: 3583764752348
effective search space used: 3583764752348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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