ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal17b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AKR2_ARATH (Q9SAR5) Ankyrin repeat domain-containing protein 2 (... 51 1e-06
2DAPK1_HUMAN (P53355) Death-associated protein kinase 1 (EC 2.7.1... 30 3.2
3RIPK4_HUMAN (P57078) Receptor-interacting serine/threonine-prote... 29 5.5
4VGLG_VHSV0 (P27662) Spike glycoprotein precursor 28 7.2
5EFG_PSEU2 (Q4ZMP1) Elongation factor G (EF-G) 28 9.4
6EFG_PSESM (Q889X4) Elongation factor G (EF-G) 28 9.4
7EFG_PSE14 (Q48D33) Elongation factor G (EF-G) 28 9.4
8SHARK_DROME (Q24145) Tyrosine-protein kinase shark (EC 2.7.10.2) 28 9.4

>AKR2_ARATH (Q9SAR5) Ankyrin repeat domain-containing protein 2 (AtAKR2)|
          Length = 342

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = +3

Query: 18  GASVTLQNLDGKTAIDVARLNSQEEVLKLLEK 113
           GA+VTLQNLD KT IDVA+LNSQ EV+KLLEK
Sbjct: 307 GAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEK 338



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>DAPK1_HUMAN (P53355) Death-associated protein kinase 1 (EC 2.7.11.1) (DAP|
           kinase 1)
          Length = 1432

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +3

Query: 18  GASVTLQNLDGKTAIDVARLNSQEEVLKLLEK 113
           GASV     DGKTA D+AR    E V  LL +
Sbjct: 635 GASVEALTTDGKTAEDLARSEQHEHVAGLLAR 666



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>RIPK4_HUMAN (P57078) Receptor-interacting serine/threonine-protein kinase 4 (EC|
           2.7.11.1) (Ankyrin repeat domain protein 3)
           (PKC-delta-interacting protein kinase)
          Length = 832

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 6   APRPGASVTLQNLDGKTAIDVARLNSQEEVLKLL 107
           A +PG SV  Q LDG+T + +A       V ++L
Sbjct: 638 AKQPGVSVNAQTLDGRTPLHLAAQRGHYRVARIL 671



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>VGLG_VHSV0 (P27662) Spike glycoprotein precursor|
          Length = 507

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 306 SMSWSVW*NLSGFWITC*SCILLVV*KCC 392
           S +WS+W +LSG  +   + +LLV+  CC
Sbjct: 457 SFNWSLWPSLSGMGVVGGAFLLLVLCCCC 485



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>EFG_PSEU2 (Q4ZMP1) Elongation factor G (EF-G)|
          Length = 701

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 329 LPHTPTHRYRSIKCELQPKRNLFFSSMEKMYWNNNNKGI 213
           L HTP     +I  E   +  +   SME +YWN+ +KG+
Sbjct: 163 LGHTPVPIQLAIGAEDNFQGQIDLMSMEAVYWNDADKGM 201



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>EFG_PSESM (Q889X4) Elongation factor G (EF-G)|
          Length = 701

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -3

Query: 329 LPHTPTHRYRSIKCELQPKRNLFFSSMEKMYWNNNNKGI 213
           L HTP     +I  E   +  +   +ME +YWN+++KG+
Sbjct: 163 LGHTPVPIQLAIGAEDNFQGQIDLMAMEAVYWNDSDKGM 201



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>EFG_PSE14 (Q48D33) Elongation factor G (EF-G)|
          Length = 701

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 329 LPHTPTHRYRSIKCELQPKRNLFFSSMEKMYWNNNNKGI 213
           L HTP     +I  E   +  +   SME +YWN+ +KG+
Sbjct: 163 LGHTPVPIQLAIGAEDNFQGQIDLMSMEAVYWNDADKGM 201



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>SHARK_DROME (Q24145) Tyrosine-protein kinase shark (EC 2.7.10.2)|
          Length = 939

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = +3

Query: 36  QNLDGKTAIDVARLNSQEEVLKLL 107
           +N DG+TA+ +A L+S E++LK L
Sbjct: 150 KNQDGQTALHLAALHSDEDILKHL 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,173,849
Number of Sequences: 219361
Number of extensions: 844704
Number of successful extensions: 2120
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2118
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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