ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal17a18 |
|---|---|
| Clone Library Name | barley_pub |
>SIX1C_LEIQH (P68723) Insect neurotoxin 1c precursor (Lqh IT1-c) (LqhIT1-c)| Length = 88 Score = 36.2 bits (82), Expect = 0.091 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = -3 Query: 329 RTHYGEGGHCCMLFCY*AGEGDQRVLVLLSD 237 + HY E G+CC+L CY G D + ++ +SD Sbjct: 46 KVHYAEKGYCCLLSCYCVGLNDDKKVMEISD 76
>SIX1_LEIQU (P19856) Insect toxins 1 and 1' (Insect toxin LqqIT1/LqqIT1')| Length = 70 Score = 35.0 bits (79), Expect = 0.20 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -3 Query: 329 RTHYGEGGHCCMLFCY*AGEGDQRVLVLLSD 237 + HY + G+CC+L CY G D + ++ +SD Sbjct: 28 KVHYADKGYCCLLSCYCVGLSDDKKVLEISD 58
>SIX2_ANDAU (P15147) Insect toxin 2 precursor (AaH IT2) (AaHIT2) (AaIT2)| Length = 88 Score = 34.3 bits (77), Expect = 0.35 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -3 Query: 329 RTHYGEGGHCCMLFCY*AGEGDQRVLVLLSD 237 + HY + G+CC+L CY G D + ++ +SD Sbjct: 46 KVHYADKGYCCLLSCYCFGLNDDKKVLEISD 76
>SIX1_ANDAU (P01497) Insect toxin 1 precursor (AaH IT1) (AaHIT1) (AaIT1) (AaH| IT) (AaHIT) Length = 88 Score = 34.3 bits (77), Expect = 0.35 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -3 Query: 329 RTHYGEGGHCCMLFCY*AGEGDQRVLVLLSD 237 + HY + G+CC+L CY G D + ++ +SD Sbjct: 46 KVHYADKGYCCLLSCYCFGLNDDKKVLEISD 76
>SIX1B_LEIQH (P68722) Insect neurotoxin 1b precursor (Lqh IT1-b) (LqhIT1-b)| Length = 88 Score = 34.3 bits (77), Expect = 0.35 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -3 Query: 329 RTHYGEGGHCCMLFCY*AGEGDQRVLVLLSD 237 + HY + G+CC+L CY G D + ++ +SD Sbjct: 46 KVHYADKGYCCLLSCYCFGLNDDKKVLEISD 76
>G3B2_HUMAN (Q9UN86) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 32.7 bits (73), Expect = 1.0 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = +2 Query: 380 KNVAPSPLVQEISVDQHTKADSSVPQLSRPQEPSTSTPSVREVLPATVP 526 KN+ PS V + H KA S P++ E + P VRE P P Sbjct: 252 KNLPPSGTVSSSGIPSHVKAPVSQPRVEAKPEVQSQPPRVREQRPRERP 300
>APLP1_MOUSE (Q03157) Amyloid-like protein 1 precursor (APLP) (APLP-1)| [Contains: C30] Length = 653 Score = 32.3 bits (72), Expect = 1.3 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%) Frame = +2 Query: 398 PLVQEISVDQH---TKADSSVPQLSRPQEPSTSTPSVREVLPATVPSKDADNISNCSERR 568 P +QE+ + +H ++ D+SVP S + S P ++ P T+P D S+ S R Sbjct: 482 PQIQELLLAEHLGPSELDASVPGSSSEDKGSLQPPESKDDPPVTLPKGSTDQESSSSGRE 541 Query: 569 NVVKI 583 + + Sbjct: 542 KLTPL 546
>G3B2_MOUSE (P97379) Ras-GTPase-activating protein-binding protein 2 (GAP| SH3-domain-binding protein 2) (G3BP-2) Length = 482 Score = 32.3 bits (72), Expect = 1.3 Identities = 17/49 (34%), Positives = 22/49 (44%) Frame = +2 Query: 380 KNVAPSPLVQEISVDQHTKADSSVPQLSRPQEPSTSTPSVREVLPATVP 526 KN+ PS V + H KA S P++ E + P VRE P P Sbjct: 252 KNLPPSGTVSSSGIPPHVKAPVSQPRVDAKPEVQSQPPRVREQRPRERP 300
>YELL_DROPS (Q9BI18) Protein yellow precursor| Length = 560 Score = 32.3 bits (72), Expect = 1.3 Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 5/94 (5%) Frame = +2 Query: 311 LRHNVFCILQIAAGRPPTLYGVPKNVAPSPLVQEISVDQHTKADSSVPQLSRPQEPSTS- 487 L N C L+ A PP +PK V P P +V + P L PQ+P TS Sbjct: 408 LIENTVCDLRNNAYGPPNTVSIPKQVGPGPRPGLSAVGPPLYTNQYRPVL--PQKPQTSW 465 Query: 488 --TPSVREVLPA--TVPSKDADNISNCSERRNVV 577 +P R LP+ P +S+ S N V Sbjct: 466 GPSPPSRSYLPSLGASPGGPGQVVSSVSVSTNSV 499
>ATR_ARATH (Q9FKS4) Serine/threonine-protein kinase ATR (EC 2.7.11.1)| (DNA-repair protein ATR) (AtATR) (Ataxia telangiectasia-mutated and Rad3-related homolog) (Rad3-like protein) (AtRAD3) Length = 2702 Score = 32.0 bits (71), Expect = 1.7 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = +3 Query: 450 FLNYQGLKNLPLALLVSVRSYLPLYLPKMLITYLTVASEGMLSKLGLGVLH 602 FL Q LK + L L+ + YL Y+PK+++ + + L GL VLH Sbjct: 1114 FLQKQALKRIKL-LIEMMGHYLSTYVPKLMVLLMHAIEKDALQSEGLLVLH 1163
>SIX1D_LEIQH (P68724) Insect neurotoxin 1d precursor (Lqh IT1-d) (LqhIT1-d)| Length = 88 Score = 32.0 bits (71), Expect = 1.7 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3 Query: 329 RTHYGEGGHCCMLFCY*AGEGDQRVLVLLSD 237 + +Y E G+CC L CY G D + ++ +SD Sbjct: 46 KVYYAEKGYCCTLSCYCVGLDDDKKVLDISD 76
>SIX1A_LEIQH (P68721) Insect neurotoxin 1a precursor (Lqh IT1-a) (LqhIT1-a)| Length = 88 Score = 32.0 bits (71), Expect = 1.7 Identities = 11/30 (36%), Positives = 19/30 (63%) Frame = -3 Query: 329 RTHYGEGGHCCMLFCY*AGEGDQRVLVLLS 240 + HY + G+CC+L CY G D + ++ +S Sbjct: 46 KVHYADKGYCCLLSCYCFGLNDDKKVLEIS 75
>BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 (BBC1 protein)| Length = 1157 Score = 31.2 bits (69), Expect = 2.9 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = +2 Query: 356 PPTLYGVPKNVAPSPLVQEISVDQHTKADSSVPQLSRPQEPSTST----PSVREVLPAT 520 PPT P AP L + V++H K+ + +P +S P +T P V PAT Sbjct: 752 PPTPPAPPAPPAPLALPKHNEVEEHVKSSAPLPPVSEEYHPMPNTAPPLPRAPPVPPAT 810
>GOPC_MOUSE (Q8BH60) Golgi-associated PDZ and coiled-coil motif-containing| protein (PDZ protein interacting specifically with TC10) (PIST) Length = 463 Score = 31.2 bits (69), Expect = 2.9 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Frame = +2 Query: 68 EASRVLLDLELHHKGLDAALLLFLKYTDEERSLRGGT---KLAVHVLRICQANIESNLTD 238 +A +V+L+ E+H + L + +S+ G KL+VH + + +E+N T+ Sbjct: 110 QAEKVVLEKEVHEQLLQLHSTQLQLHAKTGQSVDSGAIKAKLSVHSVEDLERELEANKTE 169 Query: 239 QIKVPTLFGLLHLLSSKKAYNNVLLRH 319 ++K L + LL + N L RH Sbjct: 170 KVKEARLEAEVKLLRKE---NEALRRH 193
>DLLH_BRAFL (P53772) Homeobox protein DLL homolog| Length = 321 Score = 31.2 bits (69), Expect = 2.9 Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 9/111 (8%) Frame = +2 Query: 314 RHNVFCILQIAAGRPPTLYGVPKNVAPSPLVQEISVDQHTKADSSVPQLSRPQEPSTSTP 493 R + + L G PP G P + AP+P+ Q+ H + LS Q P Sbjct: 167 RRSKYKKLMKQGGAPPPAVGTPNSSAPNPVQQQSGQPGHASPPGAPTDLSDQQMSHGGQP 226 Query: 494 SVREVLPATVPSKDADN-----ISNCSERR----NVVKIRVRRTASSSKGD 619 ++ P+ ++ D+ + C ++R +++ R+ R S G+ Sbjct: 227 NLPPRAPSQGQPQNGDDDAAWAAATCHDQRRTNADLLPTRMGRQQYQSHGE 277
>SIX1_MESMA (O61668) Excitatory insect selective toxin 1 precursor (BmK IT1)| (BmKIT1) (BmK IT) (BmKIT) (Bm32-VI) Length = 88 Score = 30.8 bits (68), Expect = 3.8 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = -3 Query: 329 RTHYGEGGHCCMLFCY*AGEGDQRVLVLLSD 237 + +Y G+CC+L CY G D + ++ + D Sbjct: 46 KVYYATSGYCCLLSCYCFGLDDDKAVLKIKD 76
>U520_DROME (Q9VUV9) Putative U5 small nuclear ribonucleoprotein 200 kDa helicase| (EC 3.6.1.-) Length = 2142 Score = 30.4 bits (67), Expect = 5.0 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = +2 Query: 263 GLLHLLSSKKAYNNVLLRHNVFCILQIAAGRPPTLYGVPKNVAP 394 GLL ++SS Y +V++RH+ +L+ + R P P AP Sbjct: 1843 GLLEIISSAAEYEDVVVRHHEEQVLRTLSQRLPNKLTGPNETAP 1886
>YELL_DROGU (Q9GP81) Protein yellow precursor| Length = 568 Score = 30.4 bits (67), Expect = 5.0 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 5/101 (4%) Frame = +2 Query: 230 LTDQIKVPTLFGLLHLLSSKKAYNNVL--LRHNVFCILQIAAGRPPTLYGVPKNVAPSPL 403 L+D++ V L L + ++ + Y L L N C L+ A PP +PK AP Sbjct: 377 LSDRMPVFLLSDLDYSDTNFRIYTAPLATLIENTVCDLRNNAYGPPNTVSIPKQAAPGH- 435 Query: 404 VQEISVDQHTKADSSVPQLSRPQEPSTS---TPSVREVLPA 517 + +T + P LS Q+P TS +P R LPA Sbjct: 436 -SAVGPPLYTTTNQYRPVLS--QKPQTSWGPSPPSRNYLPA 473
>CARB_ASHGO (Q75D66) Carbamoyl-phosphate synthase arginine-specific large chain| (EC 6.3.5.5) (Arginine-specific carbamoyl-phosphate synthetase, ammonia chain) Length = 1113 Score = 30.0 bits (66), Expect = 6.5 Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 2/163 (1%) Frame = +2 Query: 59 VRIEASRVLL--DLELHHKGLDAALLLFLKYTDEERSLRGGTKLAVHVLRICQANIESNL 232 V + S +LL DL H G AALL +T +L + +A E L Sbjct: 959 VPLPPSGILLGGDLSKEHLGRVAALLAPHGFT---------------LLALSEATCEY-L 1002 Query: 233 TDQIKVPTLFGLLHLLSSKKAYNNVLLRHNVFCILQIAAGRPPTLYGVPKNVAPSPLVQE 412 + + + +L + + + + +HNV C++ +AA R A SP+ + Sbjct: 1003 SRYLPAESSVTVLQMPETGREVRALFEQHNVQCVVNLAARR-----------ASSPIDPD 1051 Query: 413 ISVDQHTKADSSVPQLSRPQEPSTSTPSVREVLPATVPSKDAD 541 + + + D +VP + PQ ++ LPA + + +D Sbjct: 1052 YRI-RRSAIDFAVPLFNEPQTTMLFARALSAYLPAELEMRQSD 1093
>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor| (AtAGP8) Length = 420 Score = 30.0 bits (66), Expect = 6.5 Identities = 17/65 (26%), Positives = 32/65 (49%) Frame = +2 Query: 356 PPTLYGVPKNVAPSPLVQEISVDQHTKADSSVPQLSRPQEPSTSTPSVREVLPATVPSKD 535 P L+G K+ +P+P + ++ + AD+ P + P P+ T E P+ P+ Sbjct: 328 PAELFGKSKSPSPAPAPEPVTAPTPSPADAPSPTAASP--PAPPTDESPESAPSDSPTGS 385 Query: 536 ADNIS 550 A++ S Sbjct: 386 ANSKS 390
>REC8L_MOUSE (Q8C5S7) Meiotic recombination protein REC8-like 1 (Cohesin Rec8p)| Length = 591 Score = 30.0 bits (66), Expect = 6.5 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = +2 Query: 389 APSPLVQEISVDQHTKADSSVPQLSRPQEPSTSTPSVREVLPATVP 526 AP P ++SVD + +PQ+ E +T + +E LP P Sbjct: 133 APEPFFGKMSVDPRLPSPFDIPQIRHLLEAATPEKTRKETLPEATP 178
>CCNF_HUMAN (P41002) G2/mitotic-specific cyclin-F| Length = 786 Score = 30.0 bits (66), Expect = 6.5 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = +3 Query: 210 KQILNLTLLIR*KYQHSLVSFTCSVAKKHTTMSSFAIMCSAFCKLLLEGLQH 365 K++L + + + QH L SF C ++ HT++S++A A LLL L H Sbjct: 414 KEVLLTLVPVELRTQH-LCSFLCELSLLHTSLSAYAPARLAAAALLLARLTH 464
>PRD16_HUMAN (Q9HAZ2) PR domain zinc finger protein 16 (PR domain-containing| protein 16) (Transcription factor MEL1) Length = 1276 Score = 30.0 bits (66), Expect = 6.5 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Frame = +2 Query: 356 PPTLYGVPKNVAPSPLVQEISVDQHTKADSSVPQ-LSRPQEPSTSTPSVREVLPATVPSK 532 PP+LY P + P+PL++ S HT+ D+ +P L P P S S T + Sbjct: 519 PPSLYPRPPLLPPTPLLK--SPLNHTQ-DAKLPSPLGNPALPLVSAVS-NSSQGTTAAAG 574 Query: 533 DADNISNCSERRNVVKIRVRRTASSSKGDGADHRD 637 + + E V K++ R SS DG+D D Sbjct: 575 PEEKFESRLEDSCVEKLKTR---SSDMSDGSDFED 606
>POLG_HCVNZ (Q81258) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3020 Score = 30.0 bits (66), Expect = 6.5 Identities = 23/66 (34%), Positives = 31/66 (46%) Frame = -2 Query: 450 TEESALVC*STDISWTSGDGATFFGTPYSVGGLPAAICKMQNTLWRRRTLLYAFLLLSR* 271 +EE ++VC S SWT GA TP S I + N+L R L+Y+ S Sbjct: 2421 SEEQSVVCCSMSYSWT---GALI--TPCSAEEEKLPISPLSNSLLRHHNLVYSTSSRSAS 2475 Query: 270 RRPKSV 253 +R K V Sbjct: 2476 QRQKKV 2481
>POLG_HCVK3 (Q81495) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3020 Score = 30.0 bits (66), Expect = 6.5 Identities = 23/66 (34%), Positives = 31/66 (46%) Frame = -2 Query: 450 TEESALVC*STDISWTSGDGATFFGTPYSVGGLPAAICKMQNTLWRRRTLLYAFLLLSR* 271 +EE ++VC S SWT GA TP S I + N+L R L+Y+ S Sbjct: 2421 SEEQSVVCCSMSYSWT---GALI--TPCSAEEEKLPISPLSNSLLRHHNLVYSTSSRSAS 2475 Query: 270 RRPKSV 253 +R K V Sbjct: 2476 QRQKKV 2481
>RB_MOUSE (P13405) Retinoblastoma-associated protein (PP105) (RB)| Length = 921 Score = 29.6 bits (65), Expect = 8.5 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +2 Query: 296 YNNVLLRHNVFCILQIAAGRPPTLYGVPKNVAPSPLVQEISVDQHTKADSSVPQLSRPQE 475 YN+V ++ ILQ A+ RPPTL +P ++ SP S + + + L P + Sbjct: 749 YNSVFMQRLKTNILQYASTRPPTLSPIP-HIPRSPYKFSSSPLRIPGGNIYISPLKSPYK 807 Query: 476 PSTSTPSVREVLP 514 S P+ ++ P Sbjct: 808 ISEGLPTPTKMTP 820
>AXN_XENLA (Q9YGY0) Axin (Axis inhibition protein) (xAxin)| Length = 842 Score = 29.6 bits (65), Expect = 8.5 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 7/48 (14%) Frame = +2 Query: 374 VPKNVAPSPLVQEIS-----VDQHTKADSSVPQLSR--PQEPSTSTPS 496 +P N AP+PL Q +S +++ K + +PQ R PQ+ + S PS Sbjct: 710 MPPNPAPNPLTQLVSKPGARLEEEEKKAAKMPQKQRLKPQKKNVSAPS 757
>POLG_HCVSA (O91936) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3013 Score = 29.6 bits (65), Expect = 8.5 Identities = 23/66 (34%), Positives = 31/66 (46%) Frame = -2 Query: 450 TEESALVC*STDISWTSGDGATFFGTPYSVGGLPAAICKMQNTLWRRRTLLYAFLLLSR* 271 ++E ++VC S SWT GA TP S I + NTL R L+Y+ S Sbjct: 2414 SDEDSVVCCSMSYSWT---GALI--TPCSAEEEKLPINPLSNTLLRHHNLVYSTSSRSAG 2468 Query: 270 RRPKSV 253 +R K V Sbjct: 2469 QRQKKV 2474 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,365,921 Number of Sequences: 219361 Number of extensions: 2144968 Number of successful extensions: 6752 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 6417 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6741 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
