ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal17a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3... 94 3e-19
2VATG1_ARATH (O82628) Vacuolar ATP synthase subunit G 1 (EC 3.6.3... 92 7e-19
3VATG2_TOBAC (O82703) Vacuolar ATP synthase subunit G 2 (EC 3.6.3... 82 8e-16
4VATG2_ARATH (O82629) Vacuolar ATP synthase subunit G 2 (EC 3.6.3... 80 4e-15
5VATG_CITLI (Q9SP55) Vacuolar ATP synthase subunit G (EC 3.6.3.14... 80 4e-15
6VATG3_ARATH (Q9SZH0) Vacuolar ATP synthase subunit G 3 (EC 3.6.3... 47 3e-05
7DNAK1_SYNEL (Q8DKR6) Chaperone protein dnaK1 (Heat shock protein... 31 2.0
8GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment) 30 5.9
9MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronc... 30 5.9
10ALF4_ARATH (Q84VX3) Aberrant root formation protein 4 29 7.7
11Y603_HAEIN (P44773) Protein HI0603 29 7.7
12OR83A_DROME (Q9VNB3) Putative odorant receptor 83a 29 10.0

>VATG1_TOBAC (O82702) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase|
           G subunit 1) (Vacuolar proton pump G subunit 1)
          Length = 110

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 45/58 (77%), Positives = 52/58 (89%)
 Frame = +2

Query: 245 MEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 418
           MEA+FQRKL +TSGDSGANVKRLEQET+ KIE LK +A  +SP+V+QMLLRHVTTVKN
Sbjct: 53  MEAEFQRKLEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110



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>VATG1_ARATH (O82628) Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase|
           G subunit 1) (Vacuolar proton pump G subunit 1)
          Length = 110

 Score = 92.4 bits (228), Expect = 7e-19
 Identities = 45/59 (76%), Positives = 52/59 (88%)
 Frame = +2

Query: 242 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 418
           Q E DFQRKL ETSGDSGANVKRLEQET+ KIEQLK +A+ IS +V++MLL+HVTTVKN
Sbjct: 52  QTEQDFQRKLEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110



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>VATG2_TOBAC (O82703) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase|
           G subunit 2) (Vacuolar proton pump G subunit 2)
          Length = 111

 Score = 82.4 bits (202), Expect = 8e-16
 Identities = 41/58 (70%), Positives = 49/58 (84%)
 Frame = +2

Query: 245 MEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 418
           MEA+FQR + +TSGDSGANVKRLEQET  KI+ LK +A +IS +V+QMLLR VTTVKN
Sbjct: 54  MEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111



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>VATG2_ARATH (O82629) Vacuolar ATP synthase subunit G 2 (EC 3.6.3.14) (V-ATPase|
           G subunit 2) (Vacuolar proton pump G subunit 2)
          Length = 106

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 40/57 (70%), Positives = 46/57 (80%)
 Frame = +2

Query: 248 EADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 418
           E  FQRKL  TSGDSGANVKRLEQET+ KIEQLK +A  IS +V+ MLL++VTTV N
Sbjct: 50  EQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106



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>VATG_CITLI (Q9SP55) Vacuolar ATP synthase subunit G (EC 3.6.3.14) (V-ATPase G|
           subunit) (Vacuolar proton pump G subunit)
          Length = 110

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 40/59 (67%), Positives = 46/59 (77%)
 Frame = +2

Query: 242 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTTVKN 418
           Q+E +FQRKL E+ GDSGANVKRLEQET VKI  LK  A  I  +V+QM L+HVTTVKN
Sbjct: 52  QVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110



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>VATG3_ARATH (Q9SZH0) Vacuolar ATP synthase subunit G 3 (EC 3.6.3.14) (V-ATPase|
           G subunit 3) (Vacuolar proton pump G subunit 3)
          Length = 108

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 20/56 (35%), Positives = 42/56 (75%)
 Frame = +2

Query: 242 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQMLLRHVTT 409
           ++E ++Q +++ T  D  A+ KRL+ ET+V+I  LK+ ++ +S ++++ML+++VTT
Sbjct: 52  RLEEEYQTQVSGT--DQEADAKRLDDETDVRITNLKESSSKVSKDIVKMLIKYVTT 105



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>DNAK1_SYNEL (Q8DKR6) Chaperone protein dnaK1 (Heat shock protein 70-1) (Heat|
           shock 70 kDa protein 1) (HSP70-1)
          Length = 651

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = +2

Query: 266 KLTETSGDSGANVKRLEQETNV--KIEQLKQQAANISPEVIQMLLRHVTTVKN 418
           ++T   G S   ++R+ QE  +  +++Q+K++ A +  +   +L  + +T+KN
Sbjct: 496 RITNRGGLSSMEIERMRQEAQIYAQVDQIKKEIAELRNQADALLYSYESTIKN 548



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>GDB3_WHEAT (P04730) Gamma-gliadin (Gliadin B-III) (Fragment)|
          Length = 244

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = -1

Query: 548 FPRQRTRNYSWKWQKPFLITPPKEINR*YKVVIIICRADSSTFSSS 411
           FP Q  +++ W+ Q+PFL  P +   +  +VV II  A  +T  S+
Sbjct: 5   FPLQPQQSFLWQSQQPFLQQPQQPSPQPQQVVQIISPATPTTIPSA 50



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>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)|
           (Tracheobronchial mucin) (TBM) (Major airway
           glycoprotein) (Fragment)
          Length = 1233

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 5   GTRRGLAFPHGILLVFHVIRVASLRQPKHG 94
           G   GL+ P  I+L +H  RV   R+P HG
Sbjct: 547 GAEDGLSCPRSIILEYHQDRVVLTRKPVHG 576



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>ALF4_ARATH (Q84VX3) Aberrant root formation protein 4|
          Length = 626

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 462 VLSVYFFGRCYKKWLLPLPAVIPCSLS 542
           +LS     + YK+WLLPL  ++ CS++
Sbjct: 560 ILSKKNLEKAYKEWLLPLRTLVSCSIA 586



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>Y603_HAEIN (P44773) Protein HI0603|
          Length = 230

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = +2

Query: 242 QMEADFQRKLTETSGDSGANVKRLEQETNVKIEQLKQQAANISPEVIQM 388
           Q  A  Q+KLT     +GAN+       N ++ QL+Q        + Q+
Sbjct: 63  QQMAKIQQKLTALENQTGANLSSNNTNNNKRLTQLEQSLKTAQENIAQL 111



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>OR83A_DROME (Q9VNB3) Putative odorant receptor 83a|
          Length = 453

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -2

Query: 361 CCLLLELFNFYVCLLLKAFDICT-RVTAGLGELSLEISLHLRTV 233
           C L  ELFN++V + +    ICT  +  G G+L   ++  ++T+
Sbjct: 52  CDLTYELFNYFVSVHIAGLYICTIYINYGQGDLDFFVNCLIQTI 95


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,797,550
Number of Sequences: 219361
Number of extensions: 1164607
Number of successful extensions: 3265
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3265
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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