| Clone Name | baal16k21 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X84056.1|HVPAF93 H.vulgare paf93 gene Length = 1154 Score = 918 bits (463), Expect = 0.0 Identities = 472/475 (99%) Strand = Plus / Plus Query: 12 ccgtcacgcacgctgctccagcgccagtgcacgcgcctgcgccggccgccgaggaggtga 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 ccgtcacgcacgctgctccagcgccagtgcacgcgcctgcgccggccgccgaggaggtga 735 Query: 72 gcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 gcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcccg 795 Query: 132 gttaccacaagacaggggaggaggacaaggccgccgccccttcaggcgagcacaagccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 gttaccacaagacaggggaggaggacaaggccgccgccccttcaggcgagcacaagccca 855 Query: 192 gagcttgatcgccgccgtgccccgagactcatcaccggacctccattaaattgttggcgt 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 gagcttgatcgccgccgtgccccgagactcatcaccggacctccattaaattgttggcgt 915 Query: 252 gtgtcgtgtttgctttaagtttaagtccgtgtcaagatggagggattgatcgtctttgaa 311 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 916 gtgtcgtgtttgctttacgtctaagtccgtgtcaagatggagggattgatcgtctttgaa 975 Query: 312 ggtccggtctgtgaagcccgttaggtgacggatgcttgtgttcagtttgggtatacgggc 371 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 ggtccggtctgtgaagtccgttaggtgacggatgcttgtgttcagtttgggtatacgggc 1035 Query: 372 ttcagtttggtccagagtcaggtcctggatgttgtttaagtttatttgcttattattacg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1036 ttcagtttggtccagagtcaggtcctggatgttgtttaagtttatttgcttattattacg 1095 Query: 432 ggcactttgtgtattggtttattgctgggcattatgccttgatattaaagatttc 486 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1096 ggcactttgtgtattggtttattgctgggcattatgccttgatattaaagatttc 1150
>gb|AF043093.1|AF043093 Hordeum vulgare dehydrin 8 (dhn8) gene, complete cds Length = 2254 Score = 577 bits (291), Expect = e-161 Identities = 291/291 (100%) Strand = Plus / Plus Query: 12 ccgtcacgcacgctgctccagcgccagtgcacgcgcctgcgccggccgccgaggaggtga 71 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1956 ccgtcacgcacgctgctccagcgccagtgcacgcgcctgcgccggccgccgaggaggtga 2015 Query: 72 gcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcccg 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2016 gcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcccg 2075 Query: 132 gttaccacaagacaggggaggaggacaaggccgccgccccttcaggcgagcacaagccca 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2076 gttaccacaagacaggggaggaggacaaggccgccgccccttcaggcgagcacaagccca 2135 Query: 192 gagcttgatcgccgccgtgccccgagactcatcaccggacctccattaaattgttggcgt 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2136 gagcttgatcgccgccgtgccccgagactcatcaccggacctccattaaattgttggcgt 2195 Query: 252 gtgtcgtgtttgctttaagtttaagtccgtgtcaagatggagggattgatc 302 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2196 gtgtcgtgtttgctttaagtttaagtccgtgtcaagatggagggattgatc 2246
>gb|U73211.1|TAU73211 Triticum aestivum cold acclimation protein WCOR410c (Wcor410c) mRNA, complete cds Length = 1242 Score = 460 bits (232), Expect = e-126 Identities = 326/352 (92%), Gaps = 4/352 (1%) Strand = Plus / Plus Query: 12 ccgtcacgcacgctgctccagcgccagtgcacgcgcctgcgccggccgccgaggaggtga 71 |||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct: 688 ccgtcacgcacgctgctccagcaccagtgcacgcgccggcgccagccgccgaggaggtga 747 Query: 72 gcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcccg 131 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 748 gcagccctgacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcctg 807 Query: 132 gttaccacaagacaggggaggaggacaaggccgccgccccttcaggcgagcacaagccca 191 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 808 gttaccacaagacaggggaggaggacaaggccgccgccgctgcaggcgagcacaagccca 867 Query: 192 gagcttgatcgccgccgtgccccgagactcatcaccggacctccattaaattgttggcgt 251 | ||||||||||||||||| |||||||||| | |||||||||| ||| |||||||||||| Sbjct: 868 gcgcttgatcgccgccgtg-cccgagactcgtgaccggacctcgattgaattgttggcgt 926 Query: 252 gtgtcgtgtttgctttaagtttaagtccgtgtcaagat-ggagggattgatcgtctttga 310 |||| |||||||||||| | |||||| |||||||| | |||||| |||||||||||||| Sbjct: 927 gtgttgtgtttgctttacg-ttaagttggtgtcaaggtgggaggggttgatcgtctttga 985 Query: 311 aggtccggtctgtgaagcccgttaggtgacggatgcttgtg-ttcagtttgg 361 |||| ||||| |||||||||||| |||||||||||||||| |||||||||| Sbjct: 986 aggttcggtccgtgaagcccgttcagtgacggatgcttgtgtttcagtttgg 1037 Score = 121 bits (61), Expect = 2e-24 Identities = 104/115 (90%), Gaps = 5/115 (4%) Strand = Plus / Plus Query: 372 ttcagtttggtccagagtcaggtcctggatgttgtttaagtttatttgcttattattacg 431 ||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||| | Sbjct: 1028 ttcagtttggttcagagtcaggtcctggatgttgtt-aagtttgtttacttattat---g 1083 Query: 432 ggcactttgtgtattggtttattgctgggcattatgccttgatattaaagatttc 486 ||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1084 ggcgctt-gtgtattggttatttgctgggcattatgccttgatattaaagatttc 1137
>gb|U73210.1|TAU73210 Triticum aestivum cold acclimation protein WCOR410b (Wcor410b) mRNA, complete cds Length = 1181 Score = 442 bits (223), Expect = e-121 Identities = 315/343 (91%), Gaps = 2/343 (0%) Strand = Plus / Plus Query: 12 ccgtcacgcacgctgctccagcgccagtgcacgcgcctgcgccggccgccgaggaggtga 71 |||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||| Sbjct: 697 ccgtcacgcacgctgctccagcaccggtgcacgcgccggcgccggccgccgaggaggtga 756 Query: 72 gcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcccg 131 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 757 gcagccctgacgcgaaggagaagaagggcctgctgggcaagatcatggacaagctgcctg 816 Query: 132 gttaccacaagacaggggaggaggacaaggccgccgccccttcaggcgagcacaagccca 191 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 817 gttaccacaagacaggggaggaggacaaggccgccgccgctacaggcgagcacaagccca 876 Query: 192 gagcttgatcgccgccgtgccccgagactcatcaccggacctccattaaattgttggcgt 251 | ||||||||||||||||| |||||||| | | |||||||||| ||| |||||||||||| Sbjct: 877 gcgcttgatcgccgccgtg-cccgagacccgtgaccggacctcgattgaattgttggcgt 935 Query: 252 gtgtcgtgtttgctttaagtttaagtccgtgtcaagat-ggagggattgatcgtctttga 310 |||| |||||||||||| || ||||| |||||||| | |||||| |||||||||||||| Sbjct: 936 gtgttgtgtttgctttacgtctaagttggtgtcaaggtgggaggggttgatcgtctttga 995 Query: 311 aggtccggtctgtgaagcccgttaggtgacggatgcttgtgtt 353 |||||||||| |||||||||||| ||||||| ||||| |||| Sbjct: 996 aggtccggtccgtgaagcccgttgagtgacgggtgcttctgtt 1038 Score = 97.6 bits (49), Expect = 3e-17 Identities = 49/49 (100%) Strand = Plus / Plus Query: 438 ttgtgtattggtttattgctgggcattatgccttgatattaaagatttc 486 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 ttgtgtattggtttattgctgggcattatgccttgatattaaagatttc 1137 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 12 ccgtcacgcacgctgctccagcgcc 36 ||||||||||||||||||| ||||| Sbjct: 673 ccgtcacgcacgctgctccggcgcc 697
>gb|L29152.1|WHTWCOR Triticum aestivum cold acclimation protein (WCOR410) mRNA, complete cds Length = 1136 Score = 436 bits (220), Expect = e-119 Identities = 322/352 (91%), Gaps = 3/352 (0%) Strand = Plus / Plus Query: 12 ccgtcacgcacgctgctccagcgccagtgcacgcgcctgcgccggccgccgaggaggtga 71 |||||||||||||||||||||| |||||||||||||| | ||||||| |||||||||||| Sbjct: 688 ccgtcacgcacgctgctccagcaccagtgcacgcgccggtgccggcccccgaggaggtga 747 Query: 72 gcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcccg 131 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct: 748 gcagccctgacgcgaaggagaagaagggcctgctgggcaagatcatggacaagctgcctg 807 Query: 132 gttaccacaagacaggggaggaggacaaggccgccgccccttcaggcgagcacaagccca 191 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct: 808 gttaccacaagacaggggaggaggacaaggccgccgccgctacaggcgagcacaagccca 867 Query: 192 gagcttgatcgccgccgtgccccgagactcatcaccggacctccattaaattgttggcgt 251 | ||||||||||||||||| |||||||| | | |||||||||| ||| |||||||||||| Sbjct: 868 gcgcttgatcgccgccgtg-cccgagacccgtgaccggacctcgattgaattgttggcgt 926 Query: 252 gtgtcgtgtttgctttaagtttaagtccgtgtcaagat-ggagggattgatcgtctttga 310 |||| |||||||||||| || ||||| |||||||| | |||||| |||||||||||||| Sbjct: 927 gtgttgtgtttgctttacgtctaagttggtgtcaaggtgggaggggttgatcgtctttga 986 Query: 311 aggtccggtctgtgaagcccgttaggtgacggatgcttgtg-ttcagtttgg 361 |||||||||| |||||||||||| ||||||| ||||| || |||||||||| Sbjct: 987 aggtccggtccgtgaagcccgttcagtgacgggtgcttctgtttcagtttgg 1038 Score = 119 bits (60), Expect = 9e-24 Identities = 103/115 (89%), Gaps = 8/115 (6%) Strand = Plus / Plus Query: 372 ttcagtttggtccagagtcaggtcctggatgttgtttaagtttatttgcttattattacg 431 ||||||||||| ||||||||||||||||||||||| |||||| ||| ||||| | Sbjct: 1029 ttcagtttggttcagagtcaggtcctggatgttgtc-aagtttgtttacttat------g 1081 Query: 432 ggcactttgtgtattggtttattgctgggcattatgccttgatattaaagatttc 486 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 ggcactt-gtgtattggtttattgctgggcattatgccttgatattaaagatttc 1135
>gb|AF181458.1|AF181458 Hordeum vulgare dehydrin (Dhn8) mRNA, complete cds Length = 808 Score = 432 bits (218), Expect = e-118 Identities = 221/222 (99%) Strand = Plus / Plus Query: 16 cacgcacgctgctccagcgccagtgcacgcgcctgcgccggccgccgaggaggtgagcag 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 cacgcacgctgctccagcgccagtgcacgcgcctgcgccggccgccgaggaggtgagcag 646 Query: 76 cccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcccggtta 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 cccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcccggtta 706 Query: 136 ccacaagacaggggaggaggacaaggccgccgccccttcaggcgagcacaagcccagagc 195 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 ccacaagacagaggaggaggacaaggccgccgccccttcaggcgagcacaagcccagagc 766 Query: 196 ttgatcgccgccgtgccccgagactcatcaccggacctccat 237 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ttgatcgccgccgtgccccgagactcatcaccggacctccat 808
>gb|L19419.1|LHPESI Lophopyrum elongatum ES135 mRNA sequence Length = 1130 Score = 383 bits (193), Expect = e-103 Identities = 316/352 (89%), Gaps = 10/352 (2%) Strand = Plus / Plus Query: 12 ccgtcacgcacgctgctccagcgccagtgcacgcgcctgcgccggccgccgaggaggtga 71 |||||||||||||||| ||||| || ||||||||||| |||||||||||| |||| Sbjct: 666 ccgtcacgcacgctgccccagcaccggtgcacgcgcc------ggccgccgaggaagtga 719 Query: 72 gcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcccg 131 ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||| | Sbjct: 720 gcagccctgacgcgaaggagaagaagggcttgctgggcaagatcatggacaagctgcctg 779 Query: 132 gttaccacaagacaggggaggaggacaaggccgccgccccttcaggcgagcacaagccca 191 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 780 gttaccacaagacaggggaggaggacaaggccgccgcccctgcaggcgagcacaagccca 839 Query: 192 gagcttgatcgccgccgtgccccgagactcatcaccggacctccattaaattgttggcgt 251 | |||| |||||||||||| |||||||||| | |||||| ||| ||| |||||||||||| Sbjct: 840 gcgcttaatcgccgccgtg-cccgagactcgtgaccggagctcgattgaattgttggcgt 898 Query: 252 gtgtcgtgtttgctttaagtttaagtccgtgtcaagat-ggagggattgatcgtctttga 310 |||| |||||||||||| || ||||| |||||||| | |||||| ||||||||| |||| Sbjct: 899 gtgttgtgtttgctttacgtctaagttggtgtcaaggtgggaggggttgatcgtc-ttga 957 Query: 311 aggtccggtctgtgaagcccgttaggtgacggatgcttgtg-ttcagtttgg 361 ||||||||||||||||||||||| |||||||||| ||||| |||||||||| Sbjct: 958 aggtccggtctgtgaagcccgttcagtgacggatgtttgtgtttcagtttgg 1009 Score = 127 bits (64), Expect = 4e-26 Identities = 104/115 (90%), Gaps = 8/115 (6%) Strand = Plus / Plus Query: 372 ttcagtttggtccagagtcaggtcctggatgttgtttaagtttatttgcttattattacg 431 ||||||||||| |||||||||||||||||||||||| |||||| ||| ||||| | Sbjct: 1000 ttcagtttggttcagagtcaggtcctggatgttgtt-aagtttgtttacttat------g 1052 Query: 432 ggcactttgtgtattggtttattgctgggcattatgccttgatattaaagatttc 486 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 ggcactt-gtgtattggtttattgctgggcattatgccttgatattaaagatttc 1106
>emb|AJ890140.1| Triticum turgidum subsp. durum mRNA for dehydrin (dhn11 gene) Length = 1127 Score = 375 bits (189), Expect = e-101 Identities = 317/353 (89%), Gaps = 5/353 (1%) Strand = Plus / Plus Query: 12 ccgtcacgcacgctgctccagcgccagtgcacgcgcctgcgccggccgccgaggaggtga 71 |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||| Sbjct: 685 ccgtcacgcacgctgctccagcaccagtgcacgcgccggcgccatccgccgaggaggtga 744 Query: 72 gcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctgcccg 131 || ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 745 ccatccctgacccgaaggagaagaagggcctactgggcaagatcatggacaagctgcctg 804 Query: 132 gttaccacaagacaggggaggaggacaaggccgccgccccttca-ggcgagcacaagccc 190 ||||||||||||||||||||||||||||| |||||||| || || ||||||||||| ||| Sbjct: 805 gttaccacaagacaggggaggaggacaagtccgccgccgctgcagggcgagcacaatccc 864 Query: 191 agagcttgatcgccgccgtgccccgagactcatcaccggacctccattaaattgttggcg 250 | |||||| |||||||||| |||||||||| | |||||||| | ||| ||||||||||| Sbjct: 865 aacgcttgaacgccgccgtg-cccgagactcgtgaccggaccccgattgaattgttggcg 923 Query: 251 tgtgtcgtgtttgctttaagtttaagtccgtgtcaagat-ggagggattgatcgtctttg 309 ||||| |||||||||||| | |||||| |||||||| | |||||| ||||||||||||| Sbjct: 924 tgtgttgtgtttgctttacg-ttaagttggtgtcaaggtgggaggggttgatcgtctttg 982 Query: 310 aaggtccggtctgtgaagcccgttaggtgacggatgcttgtg-ttcagtttgg 361 ||||| ||||| |||||||||||| |||||||||||||||| |||||||||| Sbjct: 983 aaggttcggtccgtgaagcccgttcagtgacggatgcttgtgtttcagtttgg 1035 Score = 105 bits (53), Expect = 1e-19 Identities = 96/107 (89%), Gaps = 5/107 (4%) Strand = Plus / Plus Query: 372 ttcagtttggtccagagtcaggtcctggatgttgtttaagtttatttgcttattattacg 431 ||||||||||| |||||||||||||||||||||||| |||||| ||| |||||||| | Sbjct: 1026 ttcagtttggttcagagtcaggtcctggatgttgtt-aagtttgtttacttattat---g 1081 Query: 432 ggcactttgtgtattggtttattgctgggcattatgccttgatatta 478 ||| ||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 1082 ggcgctt-gtgtattggttatttgctgggcattatgccttgatatta 1127
>gb|AY574032.1| Triticum aestivum dehydrin-like gene, partial sequence Length = 391 Score = 176 bits (89), Expect = 4e-41 Identities = 108/113 (95%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 12 ccgtcacgcacgctgctccagcgccagt-gcacgcgcctgcgccggccgccgaggaggtg 70 |||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||| Sbjct: 278 ccgtcacgcacgctgctccagcaccagtagcacgcgccggcgccagccgccgaggaggtg 337 Query: 71 agcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggacaa 123 |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 agcagccctgacgcgaaggagaagaagggcctactgggcaagatcatggacaa 390
>gb|AY587109.1| Oryza sativa (japonica cultivar-group) dehydration-stress inducible protein 1 mRNA, complete cds Length = 1315 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 62 gaggaggtgagcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggac 121 ||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct: 838 gaggaagtgagcagcccggatgggaaggagaagaagggtatactgggcaagatcatggag 897 Query: 122 aagctgcccggttaccacaag 142 || |||||||||||||||||| Sbjct: 898 aaactgcccggttaccacaag 918 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Plus Query: 441 tgtattggtttattgctgggcattatgccttgatattaaagatttc 486 ||||||||||| |||||||||| ||||||| |||||| |||||| Sbjct: 1213 tgtattggttttgggctgggcattctgccttggtattaatgatttc 1258 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Plus Query: 87 aggagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||||| | || | |||||||| ||| ||||||||||| Sbjct: 689 aggagaagaagggcttcctcgacaagatcaaggagaagctgcccgg 734
>gb|AY786415.1| Oryza sativa (japonica cultivar-group) SK3-type dehydrin 1 (Dhn1) mRNA, complete cds Length = 1117 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 62 gaggaggtgagcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggac 121 ||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct: 828 gaggaagtgagcagcccggatgggaaggagaagaagggtatactgggcaagatcatggag 887 Query: 122 aagctgcccggttaccacaag 142 || |||||||||||||||||| Sbjct: 888 aaactgcccggttaccacaag 908 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Plus Query: 87 aggagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||||| | || | |||||||| ||| ||||||||||| Sbjct: 679 aggagaagaagggcttcctcgacaagatcaaggagaagctgcccgg 724
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 62 gaggaggtgagcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggac 121 ||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct: 27184449 gaggaagtgagcagcccggatgggaaggagaagaagggtatactgggcaagatcatggag 27184390 Query: 122 aagctgcccggttaccacaag 142 || |||||||||||||||||| Sbjct: 27184389 aaactgcccggttaccacaag 27184369 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 87 aggagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||||| | || | |||||||| ||| ||||||||||| Sbjct: 27184598 aggagaagaagggcttcctcgacaagatcaaggagaagctgcccgg 27184553 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 441 tgtattggtttattgctgggcattatgccttgatattaaagatttc 486 ||||||||||| |||||||||| ||||||| |||||| |||||| Sbjct: 27184074 tgtattggttttgggctgggcattctgccttggtattaatgatttc 27184029
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1725_H08 Length = 155431 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 62 gaggaggtgagcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggac 121 ||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct: 80898 gaggaagtgagcagcccggatgggaaggagaagaagggtatactgggcaagatcatggag 80839 Query: 122 aagctgcccggttaccacaag 142 || |||||||||||||||||| Sbjct: 80838 aaactgcccggttaccacaag 80818 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 87 aggagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||||| | || | |||||||| ||| ||||||||||| Sbjct: 81047 aggagaagaagggcttcctcgacaagatcaaggagaagctgcccgg 81002
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Minus Query: 62 gaggaggtgagcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggac 121 ||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct: 35120 gaggaagtgagcagcccggatgggaaggagaagaagggtatactgggcaagatcatggag 35061 Query: 122 aagctgcccggttaccacaag 142 || |||||||||||||||||| Sbjct: 35060 aaactgcccggttaccacaag 35040 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 87 aggagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||||| | || | |||||||| ||| ||||||||||| Sbjct: 35269 aggagaagaagggcttcctcgacaagatcaaggagaagctgcccgg 35224 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 441 tgtattggtttattgctgggcattatgccttgatattaaagatttc 486 ||||||||||| |||||||||| ||||||| |||||| |||||| Sbjct: 34745 tgtattggttttgggctgggcattctgccttggtattaatgatttc 34700
>dbj|AK070197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N13, full insert sequence Length = 1292 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 62 gaggaggtgagcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggac 121 ||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct: 850 gaggaagtgagcagcccggatgggaaggagaagaagggtatactgggcaagatcatggag 909 Query: 122 aagctgcccggttaccacaag 142 || |||||||||||||||||| Sbjct: 910 aaactgcccggttaccacaag 930 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Plus Query: 441 tgtattggtttattgctgggcattatgccttgatattaaagatttc 486 ||||||||||| |||||||||| ||||||| |||||| |||||| Sbjct: 1225 tgtattggttttgggctgggcattctgccttggtattaatgatttc 1270 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Plus Query: 87 aggagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||||| | || | |||||||| ||| ||||||||||| Sbjct: 701 aggagaagaagggcttcctcgacaagatcaaggagaagctgcccgg 746
>dbj|AB011367.1| Oryza sativa mRNA for LIP9, partial cds Length = 680 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 62 gaggaggtgagcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggac 121 ||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct: 271 gaggaagtgagcagcccggatgggaaggagaagaagggtatactgggcaagatcatggag 330 Query: 122 aagctgcccggttaccacaag 142 || |||||||||||||||||| Sbjct: 331 aaactgcccggttaccacaag 351 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Plus Query: 87 aggagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||||| | || | |||||||| ||| ||||||||||| Sbjct: 122 aggagaagaagggcttcctcgacaagatcaaggagaagctgcccgg 167
>gb|AY105067.1| Zea mays PCO081051 mRNA sequence Length = 1398 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 68 gtgagcagcccggacgcgaaggagaagaagggcctactgggcaagatcatggacaagctg 127 |||||||||||||| | ||||||||||||||| | ||||||||||||||||||||| | Sbjct: 853 gtgagcagcccggatggcaaggagaagaagggcttgctgggcaagatcatggacaagata 912 Query: 128 cccggttaccacaaga 143 ||||| |||||||||| Sbjct: 913 cccggctaccacaaga 928
>gb|BT019045.1| Zea mays clone Contig566.F mRNA sequence Length = 722 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 92 aagaagggcctactgggcaagatcatggacaagctgcccggttaccacaaga 143 ||||||||| | ||||||||||||||||||||| | ||||| |||||||||| Sbjct: 302 aagaagggcttgctgggcaagatcatggacaagatacccggctaccacaaga 353
>gb|L35913.1|MZELIPASE Zea mays dehydrin (dhn-2) mRNA, complete cds Length = 1277 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 92 aagaagggcctactgggcaagatcatggacaagctgcccggttaccacaaga 143 ||||||||| | ||||||||||||||||||||| | ||||| |||||||||| Sbjct: 813 aagaagggcttgctgggcaagatcatggacaagatacccggctaccacaaga 864
>gb|AY111114.1| Zea mays CL2452_1 mRNA sequence Length = 1256 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 92 aagaagggcctactgggcaagatcatggacaagctgcccggttaccacaaga 143 ||||||||| | ||||||||||||||||||||| | ||||| |||||||||| Sbjct: 792 aagaagggcttgctgggcaagatcatggacaagatacccggctaccacaaga 843
>emb|AJ439990.1|OSA439990 Oryza sativa partial mRNA for putative cold acclimation protein (cap-L gene) Length = 504 Score = 60.0 bits (30), Expect = 7e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 102 tactgggcaagatcatggacaagctgcccggttaccacaag 142 ||||||||||||||||| | || |||||||||||||||||| Sbjct: 83 tactgggcaagatcatgnagaaactgcccggttaccacaag 123
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 44 gcgcctgcgccggccgccgaggaggtga 71 ||||| |||||||||||||||||||||| Sbjct: 18517247 gcgccggcgccggccgccgaggaggtga 18517274
>dbj|AK073885.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073G16, full insert sequence Length = 976 Score = 48.1 bits (24), Expect = 0.027 Identities = 27/28 (96%) Strand = Plus / Plus Query: 44 gcgcctgcgccggccgccgaggaggtga 71 ||||| |||||||||||||||||||||| Sbjct: 499 gcgccggcgccggccgccgaggaggtga 526
>emb|AL808127.4| Mouse DNA sequence from clone RP23-263L18 on chromosome 2, complete sequence Length = 205838 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 369 ggcttcagtttggtccagagtcag 392 |||||||||||||||||||||||| Sbjct: 138316 ggcttcagtttggtccagagtcag 138293
>ref|NM_192777.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1419 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gcgcctgcgccggccgccgaggagg 68 |||||| |||||||||||||||||| Sbjct: 325 gcgccttcgccggccgccgaggagg 349
>gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, complete sequence Length = 156547 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 343 atgcttgtgttcagtttgggt 363 ||||||||||||||||||||| Sbjct: 134261 atgcttgtgttcagtttgggt 134241
>gb|AY349246.1| Hordeum vulgare subsp. spontaneum NPGS PI 560559 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349245.1| Hordeum vulgare subsp. spontaneum NPGS PI 560556 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349244.1| Hordeum vulgare subsp. spontaneum NPGS PI 531957 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349243.1| Hordeum vulgare subsp. spontaneum NPGS PI 531853 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349242.1| Hordeum vulgare subsp. spontaneum NPGS PI 531851 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349241.1| Hordeum vulgare subsp. spontaneum NPGS PI 466460 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349240.1| Hordeum vulgare subsp. spontaneum NPGS PI 420916 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349239.1| Hordeum vulgare subsp. spontaneum NPGS PI 420913 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349238.1| Hordeum vulgare subsp. spontaneum NPGS PI 420911 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349237.1| Hordeum vulgare subsp. spontaneum NPGS PI 406276 dehydrin 5 (Dhn5) gene, partial cds Length = 1055 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 957 gagaagaagagcctcatggacaagatcaaggacaagctgcc 997
>gb|AY349236.1| Hordeum vulgare subsp. spontaneum NPGS PI 401371 dehydrin 5 (Dhn5) gene, partial cds Length = 446 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 348 gagaagaagagcctcatggacaagatcaaggacaagctgcc 388
>gb|AY349235.1| Hordeum vulgare subsp. spontaneum NPGS PI 401371 dehydrin 5 (Dhn5) gene, partial cds Length = 446 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 348 gagaagaagagcctcatggacaagatcaaggacaagctgcc 388
>gb|AY349234.1| Hordeum vulgare subsp. spontaneum NPGS PI 401370 dehydrin 5 (Dhn5) gene, partial cds Length = 1055 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 957 gagaagaagagcctcatggacaagatcaaggacaagctgcc 997
>gb|AY349233.1| Hordeum vulgare subsp. spontaneum NPGS PI 366446 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349232.1| Hordeum vulgare subsp. spontaneum NPGS PI 296926 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349231.1| Hordeum vulgare subsp. spontaneum NPGS PI 293411 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349230.1| Hordeum vulgare subsp. spontaneum NPGS PI 293409 dehydrin 5 (Dhn5) gene, partial cds Length = 1061 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 963 gagaagaagagcctcatggacaagatcaaggacaagctgcc 1003
>gb|AY349229.1| Hordeum vulgare subsp. spontaneum NPGS PI 293402 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349228.1| Hordeum vulgare subsp. spontaneum NPGS PI 268242 dehydrin 5 (Dhn5) gene, partial cds Length = 1055 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 957 gagaagaagagcctcatggacaagatcaaggacaagctgcc 997
>gb|AY349227.1| Hordeum vulgare subsp. spontaneum NPGS PI 254894 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349226.1| Hordeum vulgare subsp. spontaneum NPGS PI 253933 dehydrin 5 (Dhn5) gene, partial cds Length = 446 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 348 gagaagaagagcctcatggacaagatcaaggacaagctgcc 388
>gb|AY349225.1| Hordeum vulgare subsp. spontaneum NPGS PI 253933 dehydrin 5 (Dhn5) gene, partial cds Length = 446 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 348 gagaagaagagcctcatggacaagatcaaggacaagctgcc 388
>gb|AY349224.1| Hordeum vulgare subsp. spontaneum NPGS PI 236388 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349223.1| Hordeum vulgare subsp. spontaneum NPGS PI 220523 dehydrin 5 (Dhn5) gene, partial cds Length = 1055 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 957 gagaagaagagcctcatggacaagatcaaggacaagctgcc 997
>gb|AY349222.1| Hordeum vulgare subsp. spontaneum NPGS PI 219796 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349221.1| Hordeum vulgare subsp. spontaneum NPGS PI 212306 dehydrin 5 (Dhn5) gene, partial cds Length = 1049 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 951 gagaagaagagcctcatggacaagatcaaggacaagctgcc 991
>gb|AY349220.1| Hordeum vulgare subsp. spontaneum NPGS PI 212305 dehydrin 5 (Dhn5) gene, partial cds Length = 1055 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 957 gagaagaagagcctcatggacaagatcaaggacaagctgcc 997
>emb|AL138725.19| Human DNA sequence from clone RP11-528A10 on chromosome 6 Contains an IMPDH1 (IMP (inosine monophosphate) dehydrogenase 1) pseudogene, an RNA helicase pseudogene and part of a novel gene similar to KIAA0161, complete sequence Length = 165653 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 gaagaagggcctactgggcaa 111 ||||||||||||||||||||| Sbjct: 48717 gaagaagggcctactgggcaa 48697
>emb|AL772148.6| Zebrafish DNA sequence from clone CH211-153C20 in linkage group 24 Contains part of a novel gene similar to human DECR2 (peroxisomal 2,4-dienoyl CoA reductase 2), a novel gene similar to human KIAA0665, a novel gene similar to human KIAA0683, a novel gene similar to human KIAA0590, part of a novel gene and three CpG islands, complete sequence Length = 161218 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 actttgtgtattggtttattg 455 ||||||||||||||||||||| Sbjct: 156571 actttgtgtattggtttattg 156591
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gcgcctgcgccggccgccgaggagg 68 |||||| |||||||||||||||||| Sbjct: 24360631 gcgccttcgccggccgccgaggagg 24360655 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cctactgggcaagatcatgg 119 |||||||||||||||||||| Sbjct: 42400752 cctactgggcaagatcatgg 42400771
>gb|DQ015701.1| Ovis aries endothelial nitric oxide synthase mRNA, complete cds Length = 4097 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 ggggaggaggacaaggccgccgccc 170 |||||||||| |||||||||||||| Sbjct: 2171 ggggaggaggccaaggccgccgccc 2195
>gb|AF031247.1|AF031247 Lophopyrum elongatum dehydrin-/LEA group 2-like protein (ESI18-2) mRNA, complete cds Length = 1518 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 1242 gagaagaagagcctcatggacaagatcaaggacaagctgcc 1282
>emb|BX322785.6| Zebrafish DNA sequence from clone DKEYP-78B1 in linkage group 24, complete sequence Length = 176602 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 435 actttgtgtattggtttattg 455 ||||||||||||||||||||| Sbjct: 34782 actttgtgtattggtttattg 34762
>gb|AC147034.2| Mus musculus BAC clone RP23-189C2 from chromosome 7, complete sequence Length = 213581 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 447 ggtttattgctgggcattatg 467 ||||||||||||||||||||| Sbjct: 49824 ggtttattgctgggcattatg 49844
>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E01 Length = 166753 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gcgcctgcgccggccgccgaggagg 68 |||||| |||||||||||||||||| Sbjct: 106535 gcgccttcgccggccgccgaggagg 106559
>dbj|AK105551.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-A11, full insert sequence Length = 1509 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 gcgcctgcgccggccgccgaggagg 68 |||||| |||||||||||||||||| Sbjct: 375 gcgccttcgccggccgccgaggagg 399
>gb|AF181455.1|AF181455 Hordeum vulgare dehydrin (Dhn5) gene, complete cds Length = 3447 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 2273 gagaagaagagcctcatggacaagatcaaggacaagctgcc 2313
>gb|AY105409.1| Zea mays PCO095801 mRNA sequence Length = 741 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cgccggccgccgaggaggtga 71 ||||||||||||||||||||| Sbjct: 235 cgccggccgccgaggaggtga 215
>gb|AF043096.1|AF043096 Hordeum vulgare dehydrin 5 (dhn5) gene, complete cds Length = 2814 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 2271 gagaagaagagcctcatggacaagatcaaggacaagctgcc 2311
>gb|AF058794.1|AF058794 Triticum aestivum COR39 (cor39) mRNA, complete cds Length = 1243 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 1173 gagaagaagagcctcatggacaagatcaaggacaagctgcc 1213
>gb|M95810.1|BLYDHN5 Hordeum vulgare dehydrin DHN5 (Dhn5) gene, complete cds Length = 2432 Score = 42.1 bits (21), Expect = 1.7 Identities = 36/41 (87%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcc 129 ||||||||| |||| ||| |||||||| |||||||||||| Sbjct: 2266 gagaagaagagcctcatggacaagatcaaggacaagctgcc 2306
>gb|M99057.1|BOVNIOXSY Bovine nitric oxide synthase mRNA, complete cds Length = 4096 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 ggggaggaggacaaggccgccgccc 170 |||||||||| |||||||||||||| Sbjct: 2172 ggggaggaggccaaggccgccgccc 2196
>gb|M89952.1|BOVECNOS Bos taurus endothelial nitric oxide synthase mRNA, complete cds Length = 3738 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 146 ggggaggaggacaaggccgccgccc 170 |||||||||| |||||||||||||| Sbjct: 2162 ggggaggaggccaaggccgccgccc 2186
>ref|NM_197772.1| Oryza sativa (japonica cultivar-group) putative nucleic acid binding protein (OSJNBa0027P10.5), mRNA Length = 1377 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 cgcctgcgccggccgccgaggagg 68 |||| ||||||||||||||||||| Sbjct: 56 cgcccgcgccggccgccgaggagg 79
>gb|AC145325.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0034E03 map near 50283S, complete sequence Length = 134074 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||| | ||| |||||||| ||| ||||||||||| Sbjct: 60461 gagaagaagggcatcatggacaagatcaaggagaagctgcccgg 60504
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ggaggaggacaaggccgccg 167 |||||||||||||||||||| Sbjct: 72735 ggaggaggacaaggccgccg 72754
>gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosome 1, complete sequence Length = 221754 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 tttaagtttatttgcttatt 425 |||||||||||||||||||| Sbjct: 153679 tttaagtttatttgcttatt 153660
>ref|XM_760938.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_0511) partial mRNA Length = 5448 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 gatgttgtttaagtttattt 418 |||||||||||||||||||| Sbjct: 4884 gatgttgtttaagtttattt 4865
>gb|AC144479.1| Pan troglodytes BAC clone RP43-126P12 from 7, complete sequence Length = 211515 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 403 ttgtttaagtttatttgcttattattac 430 |||||||| || |||||||||||||||| Sbjct: 140841 ttgtttaatttaatttgcttattattac 140814
>emb|CR339044.19| Zebrafish DNA sequence from clone CH211-122G23 in linkage group 5, complete sequence Length = 177385 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 406 tttaagtttatttgcttattatta 429 ||||||||||||| |||||||||| Sbjct: 63623 tttaagtttatttacttattatta 63646
>emb|BX927212.11| Zebrafish DNA sequence from clone CH211-262A5 in linkage group 5, complete sequence Length = 157791 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 406 tttaagtttatttgcttattatta 429 ||||||||||||| |||||||||| Sbjct: 81112 tttaagtttatttacttattatta 81135
>gb|AE005809.1| Caulobacter crescentus CB15 section 135 of 359 of the complete genome Length = 10696 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cgcgcctgcgccggccgccg 62 |||||||||||||||||||| Sbjct: 6596 cgcgcctgcgccggccgccg 6577
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gcgccagtgcacgcgcctgc 51 |||||||||||||||||||| Sbjct: 3181599 gcgccagtgcacgcgcctgc 3181618
>gb|AE012230.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 138 of 460 of the complete genome Length = 10813 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ctccagcgccagtgcacgcg 46 |||||||||||||||||||| Sbjct: 10190 ctccagcgccagtgcacgcg 10209
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 cgcctgcgccggccgccgaggagg 68 |||| ||||||||||||||||||| Sbjct: 69723 cgcccgcgccggccgccgaggagg 69746
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ctccagcgccagtgcacgcg 46 |||||||||||||||||||| Sbjct: 3509672 ctccagcgccagtgcacgcg 3509653
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||| | ||| |||||||| ||| ||||||||||| Sbjct: 14766599 gagaagaagggcatcatggacaagatcaaggagaagctgcccgg 14766556
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 cgcctgcgccggccgccgaggagg 68 |||| ||||||||||||||||||| Sbjct: 21755040 cgcccgcgccggccgccgaggagg 21755063
>gb|AF031248.1|AF031248 Lophopyrum elongatum dehydrin-/LEA group 2-like protein (ESI18-3) mRNA, complete cds Length = 793 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||| | ||| |||||||| ||| ||||||||||| Sbjct: 430 gagaagaagggcatcatggacaagatcaaggagaagctgcccgg 473
>dbj|AP003263.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483G10 Length = 190721 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cctactgggcaagatcatgg 119 |||||||||||||||||||| Sbjct: 60090 cctactgggcaagatcatgg 60109
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 ccgccgaggaggtgagcagc 76 |||||||||||||||||||| Sbjct: 7122475 ccgccgaggaggtgagcagc 7122494
>dbj|AB105039.1| Daucus carota CAISE1 mRNA for dehydrin protein, complete cds Length = 771 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 aagatcatggacaagctgcccggt 133 ||||||| |||||||||||||||| Sbjct: 483 aagatcaaggacaagctgcccggt 506
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 agcccggacgcgaaggagaagaag 97 ||||||| |||||||||||||||| Sbjct: 4529728 agcccggccgcgaaggagaagaag 4529751
>dbj|BS000095.1| Pan troglodytes chromosome 22 clone:RP43-177D07, map 22, complete sequences Length = 181678 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 371 cttcagtttggtccagagtcaggtcctg 398 ||||||| ||||||||||||| |||||| Sbjct: 3249 cttcagtctggtccagagtcaagtcctg 3276
>dbj|BS000094.1| Pan troglodytes chromosome 22 clone:PTB-240N13, map 22, complete sequences Length = 155513 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 371 cttcagtttggtccagagtcaggtcctg 398 ||||||| ||||||||||||| |||||| Sbjct: 131177 cttcagtctggtccagagtcaagtcctg 131204
>emb|Y00842.1|OSRAB21 Rice rab21 gene for water-stress inducible protein RAB21 Length = 2537 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||| | ||| |||||||| ||| ||||||||||| Sbjct: 2120 gagaagaagggcatcatggacaagatcaaggagaagctgcccgg 2163
>emb|X78429.1|TDDEH16 T.durum Desf. (Siliana) Dehydrin mRNA, clone pTd16 Length = 814 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||| | ||| |||||||| ||| ||||||||||| Sbjct: 462 gagaagaagggcatcatggacaagatcaaggagaagctgcccgg 505
>emb|X15287.1|HVDHN18 Barley mRNA for dehydrin (dhn18) Length = 1049 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||| | ||| |||||||| ||| ||||||||||| Sbjct: 699 gagaagaagggcatcatggacaagatcaaggagaagctgcccgg 742
>emb|X15286.1|HVDHN17 Barley mRNA for dehydrin (dhn17) Length = 812 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||| | ||| |||||||| ||| ||||||||||| Sbjct: 492 gagaagaagggcatcatggacaagatcaaggagaagctgcccgg 535
>gb|U60097.2|OSU60097 Oryza sativa dehydrin mRNA, complete cds Length = 864 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||| | ||| |||||||| ||| ||||||||||| Sbjct: 529 gagaagaagggcatcatggacaagatcaaggagaagctgcccgg 572
>gb|AF181453.1|AF181453 Hordeum vulgare dehydrin (Dhn3) gene, complete cds Length = 1575 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||| | ||| |||||||| ||| ||||||||||| Sbjct: 1307 gagaagaagggcatcatggacaagatcaaggagaagctgcccgg 1350
>gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, complete sequence Length = 176649 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 tttaagtttatttgcttatt 425 |||||||||||||||||||| Sbjct: 121476 tttaagtttatttgcttatt 121495
>gb|AF043089.1|AF043089 Hordeum vulgare dehydrin 3 (dhn3) gene, complete cds Length = 1560 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||| | ||| |||||||| ||| ||||||||||| Sbjct: 1270 gagaagaagggcatcatggacaagatcaaggagaagctgcccgg 1313
>dbj|AP001690.1| Homo sapiens genomic DNA, chromosome 21q, section 34/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 371 cttcagtttggtccagagtcaggtcctg 398 ||||||| ||||||||||||| |||||| Sbjct: 80661 cttcagtctggtccagagtcaagtcctg 80688
>dbj|AP000469.3| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-132H24, complete sequence Length = 136804 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 371 cttcagtttggtccagagtcaggtcctg 398 ||||||| ||||||||||||| |||||| Sbjct: 102778 cttcagtctggtccagagtcaagtcctg 102805
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 45 cgcctgcgccggccgccgaggagg 68 |||| ||||||||||||||||||| Sbjct: 21766703 cgcccgcgccggccgccgaggagg 21766726
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.6 Identities = 38/44 (86%) Strand = Plus / Minus Query: 89 gagaagaagggcctactgggcaagatcatggacaagctgcccgg 132 |||||||||||| | ||| |||||||| ||| ||||||||||| Sbjct: 14847036 gagaagaagggcatcatggacaagatcaaggagaagctgcccgg 14846993 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,082,924 Number of Sequences: 3902068 Number of extensions: 4082924 Number of successful extensions: 90957 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90137 Number of HSP's gapped (non-prelim): 805 length of query: 486 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 464 effective length of database: 17,147,199,772 effective search space: 7956300694208 effective search space used: 7956300694208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)