| Clone Name | baal16j13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB257217.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete cds, strain: Utsunomiya Length = 2484 Score = 684 bits (345), Expect = 0.0 Identities = 420/445 (94%) Strand = Plus / Plus Query: 3 tagcatttactgctgtggtattcccttgcctgcttattgcgtacatgggccaagctgcat 62 |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| | Sbjct: 1215 tagcatttaccgctgtggtattcccttgcctgcttattgcttacatggggcaagctgcgt 1274 Query: 63 atttgatgaagcatccacttgatgtagaaaggatattttatgattctgtaccagaagttc 122 ||||||||||| |||||| || ||||||||| |||||||||||||||||||||||||||| Sbjct: 1275 atttgatgaagaatccacgtgctgtagaaagaatattttatgattctgtaccagaagttc 1334 Query: 123 tgttctggccagtatttgtgattgctacactcgctgctatgatcgccagccaagctatga 182 | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 1335 tattctggccagtatttgtgattgctacacttgctgctatgattgccagccaagctatga 1394 Query: 183 tatctgcaaccttctcttgcataaagcaggctatggctcttggttgctttcctaggatca 242 ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 1395 tatctgcgacattctcttgcataaagcaggctatggctcttggctgctttcctaggatta 1454 Query: 243 aaataatccatacctccaagaaagtcatgggtcagatttacatacctgtgatgaattggt 302 | ||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 1455 agataatccatacttccaagagagtcatgggccagatttacatacctgtgatgaattggt 1514 Query: 303 ttctcatggtcatgtgcatcatcatcgtggccactttcaggagtacgaacgatatagcga 362 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 1515 ttctcatggtcatgtgcatcatcatcgtggccactttcaggagtaccaacgatattgcca 1574 Query: 363 atgcatatggcattgctgaagttggagtcatgatggttagcactgcactggtaaccttgg 422 ||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| Sbjct: 1575 atgcatatggcattgctgaagttggcgtcatgatggttagcactgcactggtgactttgg 1634 Query: 423 tgatgcttcttatatggcaaaccaa 447 ||||||||||||||||||||||||| Sbjct: 1635 tgatgcttcttatatggcaaaccaa 1659
>dbj|AB257218.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete cds, strain: Nanpi Length = 2794 Score = 676 bits (341), Expect = 0.0 Identities = 419/445 (94%) Strand = Plus / Plus Query: 3 tagcatttactgctgtggtattcccttgcctgcttattgcgtacatgggccaagctgcat 62 |||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||| | Sbjct: 1168 tagcatttaccgctgtggtattcccttgcctgcttattgcttacatggggcaagctgcgt 1227 Query: 63 atttgatgaagcatccacttgatgtagaaaggatattttatgattctgtaccagaagttc 122 ||||||||||| |||||| || ||||||||| |||||||||||||||||||||||||||| Sbjct: 1228 atttgatgaagaatccacgtgctgtagaaagaatattttatgattctgtaccagaagttc 1287 Query: 123 tgttctggccagtatttgtgattgctacactcgctgctatgatcgccagccaagctatga 182 | ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 1288 tattctggccagtatttgtgattgctacacttgctgctatgattgccagtcaagctatga 1347 Query: 183 tatctgcaaccttctcttgcataaagcaggctatggctcttggttgctttcctaggatca 242 ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 1348 tatctgcgacattctcttgcataaagcaggctatggctcttggctgctttcctaggatta 1407 Query: 243 aaataatccatacctccaagaaagtcatgggtcagatttacatacctgtgatgaattggt 302 | ||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 1408 agataatccatacttccaagagagtcatgggccagatttacatacctgtgatgaattggt 1467 Query: 303 ttctcatggtcatgtgcatcatcatcgtggccactttcaggagtacgaacgatatagcga 362 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 1468 ttctcatggtcatgtgcatcatcatcgtggccactttcaggagtaccaacgatattgcca 1527 Query: 363 atgcatatggcattgctgaagttggagtcatgatggttagcactgcactggtaaccttgg 422 ||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| Sbjct: 1528 atgcatatggcattgctgaagttggcgtcatgatggttagcactgcactggtgactttgg 1587 Query: 423 tgatgcttcttatatggcaaaccaa 447 ||||||||||||||||||||||||| Sbjct: 1588 tgatgcttcttatatggcaaaccaa 1612
>dbj|AB257219.1| Phragmites australis PhaHAK4 mRNA for potassium transporter, complete cds, strain: Enchi Length = 2786 Score = 668 bits (337), Expect = 0.0 Identities = 418/445 (93%) Strand = Plus / Plus Query: 3 tagcatttactgctgtggtattcccttgcctgcttattgcgtacatgggccaagctgcat 62 |||||||||| | ||||||||||||||||||||||||||| |||||||| |||||||| | Sbjct: 1168 tagcatttaccgttgtggtattcccttgcctgcttattgcttacatggggcaagctgcgt 1227 Query: 63 atttgatgaagcatccacttgatgtagaaaggatattttatgattctgtaccagaagttc 122 ||||||||||| |||||| || ||||||||| |||||||||||||||||||||||||||| Sbjct: 1228 atttgatgaagaatccacgtgctgtagaaagaatattttatgattctgtaccagaagttc 1287 Query: 123 tgttctggccagtatttgtgattgctacactcgctgctatgatcgccagccaagctatga 182 | ||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 1288 tattctggccagtatttgtgattgctacacttgctgctatgattgccagtcaagctatga 1347 Query: 183 tatctgcaaccttctcttgcataaagcaggctatggctcttggttgctttcctaggatca 242 ||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 1348 tatctgcgacattctcttgcataaagcaggctatggctcttggctgctttcctaggatta 1407 Query: 243 aaataatccatacctccaagaaagtcatgggtcagatttacatacctgtgatgaattggt 302 | ||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 1408 agataatccatacttccaagagagtcatgggccagatttacatacctgtgatgaattggt 1467 Query: 303 ttctcatggtcatgtgcatcatcatcgtggccactttcaggagtacgaacgatatagcga 362 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || | Sbjct: 1468 ttctcatggtcatgtgcatcatcatcgtggccactttcaggagtaccaacgatattgcca 1527 Query: 363 atgcatatggcattgctgaagttggagtcatgatggttagcactgcactggtaaccttgg 422 ||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||| Sbjct: 1528 atgcatatggcattgctgaagttggcgtcatgatggttagcactgcactggtgactttgg 1587 Query: 423 tgatgcttcttatatggcaaaccaa 447 ||||||||||||||||||||||||| Sbjct: 1588 tgatgcttcttatatggcaaaccaa 1612
>ref|XM_450750.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3085 Score = 605 bits (305), Expect = e-170 Identities = 413/449 (91%) Strand = Plus / Plus Query: 3 tagcatttactgctgtggtattcccttgcctgcttattgcgtacatgggccaagctgcat 62 ||||||| || ||||||||||||||||| ||||||| || ||||||||||||||||||| Sbjct: 1327 tagcattcacagctgtggtattcccttgtttgcttatcgcttacatgggccaagctgcat 1386 Query: 63 atttgatgaagcatccacttgatgtagaaaggatattttatgattctgtaccagaagttc 122 |||||||||| ||||| ||| ||||||||| |||||||||||||||||||||||| ||| Sbjct: 1387 atttgatgaaatatccatttgctgtagaaagaatattttatgattctgtaccagaaattc 1446 Query: 123 tgttctggccagtatttgtgattgctacactcgctgctatgatcgccagccaagctatga 182 | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 1447 ttttctggccagtatttgtgattgctacacttgctgctatgattgccagccaagctatga 1506 Query: 183 tatctgcaaccttctcttgcataaagcaggctatggctcttggttgctttcctaggatca 242 |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| || | Sbjct: 1507 tatcagcaactttctcttgcataaagcaggccatggctcttggttgctttcctagaatta 1566 Query: 243 aaataatccatacctccaagaaagtcatgggtcagatttacatacctgtgatgaattggt 302 ||||||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 1567 aaataattcatacatccaagaaagtcatgggccagatttacattcctgttatgaattggt 1626 Query: 303 ttctcatggtcatgtgcatcatcatcgtggccactttcaggagtacgaacgatatagcga 362 ||||||||||||||||||||||||| || ||||||||||||||||| ||||| || || | Sbjct: 1627 ttctcatggtcatgtgcatcatcattgttgccactttcaggagtaccaacgacattgcca 1686 Query: 363 atgcatatggcattgctgaagttggagtcatgatggttagcactgcactggtaaccttgg 422 |||| ||||| ||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1687 atgcttatggtattgctgaagttggagttatgatggttagcactgcactggttacgttgg 1746 Query: 423 tgatgcttcttatatggcaaaccaatttg 451 ||||||||||||||||||||||||||||| Sbjct: 1747 tgatgcttcttatatggcaaaccaatttg 1775
>dbj|AK070831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063B21, full insert sequence Length = 3081 Score = 597 bits (301), Expect = e-167 Identities = 412/449 (91%) Strand = Plus / Plus Query: 3 tagcatttactgctgtggtattcccttgcctgcttattgcgtacatgggccaagctgcat 62 ||||||| || ||||||||||||||||| |||||| || ||||||||||||||||||| Sbjct: 1324 tagcattcacagctgtggtattcccttgttcgcttatcgcttacatgggccaagctgcat 1383 Query: 63 atttgatgaagcatccacttgatgtagaaaggatattttatgattctgtaccagaagttc 122 |||||||||| ||||| ||| ||||||||| |||||||||||||||||||||||| ||| Sbjct: 1384 atttgatgaaatatccatttgctgtagaaagaatattttatgattctgtaccagaaattc 1443 Query: 123 tgttctggccagtatttgtgattgctacactcgctgctatgatcgccagccaagctatga 182 | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 1444 ttttctggccagtatttgtgattgctacacttgctgctatgattgccagccaagctatga 1503 Query: 183 tatctgcaaccttctcttgcataaagcaggctatggctcttggttgctttcctaggatca 242 |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| || | Sbjct: 1504 tatcagcaactttctcttgcataaagcaggccatggctcttggttgctttcctagaatta 1563 Query: 243 aaataatccatacctccaagaaagtcatgggtcagatttacatacctgtgatgaattggt 302 ||||||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 1564 aaataattcatacatccaagaaagtcatgggccagatttacattcctgttatgaattggt 1623 Query: 303 ttctcatggtcatgtgcatcatcatcgtggccactttcaggagtacgaacgatatagcga 362 ||||||||||||||||||||||||| || ||||||||||||||||| ||||| || || | Sbjct: 1624 ttctcatggtcatgtgcatcatcattgttgccactttcaggagtaccaacgacattgcca 1683 Query: 363 atgcatatggcattgctgaagttggagtcatgatggttagcactgcactggtaaccttgg 422 |||| ||||| ||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1684 atgcttatggtattgctgaagttggagttatgatggttagcactgcactggttacgttgg 1743 Query: 423 tgatgcttcttatatggcaaaccaatttg 451 ||||||||||||||||||||||||||||| Sbjct: 1744 tgatgcttcttatatggcaaaccaatttg 1772
>dbj|AK099766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095A12, full insert sequence Length = 4054 Score = 480 bits (242), Expect = e-132 Identities = 338/370 (91%) Strand = Plus / Plus Query: 3 tagcatttactgctgtggtattcccttgcctgcttattgcgtacatgggccaagctgcat 62 ||||||| || ||||||||||||||||| ||||||| || ||||||||||||||||||| Sbjct: 2003 tagcattcacagctgtggtattcccttgtttgcttatcgcttacatgggccaagctgcat 2062 Query: 63 atttgatgaagcatccacttgatgtagaaaggatattttatgattctgtaccagaagttc 122 |||||||||| ||||| ||| ||||||||| |||||||||||||||||||||||| ||| Sbjct: 2063 atttgatgaaatatccatttgctgtagaaagaatattttatgattctgtaccagaaattc 2122 Query: 123 tgttctggccagtatttgtgattgctacactcgctgctatgatcgccagccaagctatga 182 | ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 2123 ttttctggccagtatttgtgattgctacacttgctgctatgattgccagccaagctatga 2182 Query: 183 tatctgcaaccttctcttgcataaagcaggctatggctcttggttgctttcctaggatca 242 |||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| || | Sbjct: 2183 tatcagcaactttctcttgcataaagcaggccatggctcttggttgctttcctagaatta 2242 Query: 243 aaataatccatacctccaagaaagtcatgggtcagatttacatacctgtgatgaattggt 302 ||||||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||||||| Sbjct: 2243 aaataattcatacatccaagaaagtcatgggccagatttacattcctgttatgaattggt 2302 Query: 303 ttctcatggtcatgtgcatcatcatcgtggccactttcaggagtacgaacgatatagcga 362 ||||||||||||||||||||||||| || ||||||||||||||||| ||||| || || | Sbjct: 2303 ttctcatggtcatgtgcatcatcattgttgccactttcaggagtaccaacgacattgcca 2362 Query: 363 atgcatatgg 372 |||| ||||| Sbjct: 2363 atgcttatgg 2372 Score = 131 bits (66), Expect = 2e-27 Identities = 75/78 (96%) Strand = Plus / Plus Query: 374 attgctgaagttggagtcatgatggttagcactgcactggtaaccttggtgatgcttctt 433 ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 2697 attgctgaagttggagttatgatggttagcactgcactggttacgttggtgatgcttctt 2756 Query: 434 atatggcaaaccaatttg 451 |||||||||||||||||| Sbjct: 2757 atatggcaaaccaatttg 2774
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 347 bits (175), Expect = 2e-92 Identities = 238/259 (91%) Strand = Plus / Minus Query: 114 cagaagttctgttctggccagtatttgtgattgctacactcgctgctatgatcgccagcc 173 ||||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 12611043 cagaaattcttttctggccagtatttgtgattgctacacttgctgctatgattgccagcc 12610984 Query: 174 aagctatgatatctgcaaccttctcttgcataaagcaggctatggctcttggttgctttc 233 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 12610983 aagctatgatatcagcaactttctcttgcataaagcaggccatggctcttggttgctttc 12610924 Query: 234 ctaggatcaaaataatccatacctccaagaaagtcatgggtcagatttacatacctgtga 293 |||| || |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| | Sbjct: 12610923 ctagaattaaaataattcatacatccaagaaagtcatgggccagatttacattcctgtta 12610864 Query: 294 tgaattggtttctcatggtcatgtgcatcatcatcgtggccactttcaggagtacgaacg 353 |||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct: 12610863 tgaattggtttctcatggtcatgtgcatcatcattgttgccactttcaggagtaccaacg 12610804 Query: 354 atatagcgaatgcatatgg 372 | || || ||||| ||||| Sbjct: 12610803 acattgccaatgcttatgg 12610785 Score = 139 bits (70), Expect = 9e-30 Identities = 103/114 (90%) Strand = Plus / Minus Query: 3 tagcatttactgctgtggtattcccttgcctgcttattgcgtacatgggccaagctgcat 62 ||||||| || ||||||||||||||||| ||||||| || ||||||||||||||||||| Sbjct: 12611252 tagcattcacagctgtggtattcccttgtttgcttatcgcttacatgggccaagctgcat 12611193 Query: 63 atttgatgaagcatccacttgatgtagaaaggatattttatgattctgtaccag 116 |||||||||| ||||| ||| ||||||||| |||||||||||||||||||||| Sbjct: 12611192 atttgatgaaatatccatttgctgtagaaagaatattttatgattctgtaccag 12611139 Score = 131 bits (66), Expect = 2e-27 Identities = 75/78 (96%) Strand = Plus / Minus Query: 374 attgctgaagttggagtcatgatggttagcactgcactggtaaccttggtgatgcttctt 433 ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 12610460 attgctgaagttggagttatgatggttagcactgcactggttacgttggtgatgcttctt 12610401 Query: 434 atatggcaaaccaatttg 451 |||||||||||||||||| Sbjct: 12610400 atatggcaaaccaatttg 12610383
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 347 bits (175), Expect = 2e-92 Identities = 238/259 (91%) Strand = Plus / Minus Query: 114 cagaagttctgttctggccagtatttgtgattgctacactcgctgctatgatcgccagcc 173 ||||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 76981 cagaaattcttttctggccagtatttgtgattgctacacttgctgctatgattgccagcc 76922 Query: 174 aagctatgatatctgcaaccttctcttgcataaagcaggctatggctcttggttgctttc 233 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 76921 aagctatgatatcagcaactttctcttgcataaagcaggccatggctcttggttgctttc 76862 Query: 234 ctaggatcaaaataatccatacctccaagaaagtcatgggtcagatttacatacctgtga 293 |||| || |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| | Sbjct: 76861 ctagaattaaaataattcatacatccaagaaagtcatgggccagatttacattcctgtta 76802 Query: 294 tgaattggtttctcatggtcatgtgcatcatcatcgtggccactttcaggagtacgaacg 353 |||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct: 76801 tgaattggtttctcatggtcatgtgcatcatcattgttgccactttcaggagtaccaacg 76742 Query: 354 atatagcgaatgcatatgg 372 | || || ||||| ||||| Sbjct: 76741 acattgccaatgcttatgg 76723 Score = 139 bits (70), Expect = 9e-30 Identities = 103/114 (90%) Strand = Plus / Minus Query: 3 tagcatttactgctgtggtattcccttgcctgcttattgcgtacatgggccaagctgcat 62 ||||||| || ||||||||||||||||| ||||||| || ||||||||||||||||||| Sbjct: 77190 tagcattcacagctgtggtattcccttgtttgcttatcgcttacatgggccaagctgcat 77131 Query: 63 atttgatgaagcatccacttgatgtagaaaggatattttatgattctgtaccag 116 |||||||||| ||||| ||| ||||||||| |||||||||||||||||||||| Sbjct: 77130 atttgatgaaatatccatttgctgtagaaagaatattttatgattctgtaccag 77077 Score = 131 bits (66), Expect = 2e-27 Identities = 75/78 (96%) Strand = Plus / Minus Query: 374 attgctgaagttggagtcatgatggttagcactgcactggtaaccttggtgatgcttctt 433 ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 76398 attgctgaagttggagttatgatggttagcactgcactggttacgttggtgatgcttctt 76339 Query: 434 atatggcaaaccaatttg 451 |||||||||||||||||| Sbjct: 76338 atatggcaaaccaatttg 76321
>dbj|AP005637.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711A01 Length = 162400 Score = 347 bits (175), Expect = 2e-92 Identities = 238/259 (91%) Strand = Plus / Minus Query: 114 cagaagttctgttctggccagtatttgtgattgctacactcgctgctatgatcgccagcc 173 ||||| |||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 126370 cagaaattcttttctggccagtatttgtgattgctacacttgctgctatgattgccagcc 126311 Query: 174 aagctatgatatctgcaaccttctcttgcataaagcaggctatggctcttggttgctttc 233 ||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 126310 aagctatgatatcagcaactttctcttgcataaagcaggccatggctcttggttgctttc 126251 Query: 234 ctaggatcaaaataatccatacctccaagaaagtcatgggtcagatttacatacctgtga 293 |||| || |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| | Sbjct: 126250 ctagaattaaaataattcatacatccaagaaagtcatgggccagatttacattcctgtta 126191 Query: 294 tgaattggtttctcatggtcatgtgcatcatcatcgtggccactttcaggagtacgaacg 353 |||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||| Sbjct: 126190 tgaattggtttctcatggtcatgtgcatcatcattgttgccactttcaggagtaccaacg 126131 Query: 354 atatagcgaatgcatatgg 372 | || || ||||| ||||| Sbjct: 126130 acattgccaatgcttatgg 126112 Score = 139 bits (70), Expect = 9e-30 Identities = 103/114 (90%) Strand = Plus / Minus Query: 3 tagcatttactgctgtggtattcccttgcctgcttattgcgtacatgggccaagctgcat 62 ||||||| || ||||||||||||||||| ||||||| || ||||||||||||||||||| Sbjct: 126579 tagcattcacagctgtggtattcccttgtttgcttatcgcttacatgggccaagctgcat 126520 Query: 63 atttgatgaagcatccacttgatgtagaaaggatattttatgattctgtaccag 116 |||||||||| ||||| ||| ||||||||| |||||||||||||||||||||| Sbjct: 126519 atttgatgaaatatccatttgctgtagaaagaatattttatgattctgtaccag 126466 Score = 131 bits (66), Expect = 2e-27 Identities = 75/78 (96%) Strand = Plus / Minus Query: 374 attgctgaagttggagtcatgatggttagcactgcactggtaaccttggtgatgcttctt 433 ||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| Sbjct: 125787 attgctgaagttggagttatgatggttagcactgcactggttacgttggtgatgcttctt 125728 Query: 434 atatggcaaaccaatttg 451 |||||||||||||||||| Sbjct: 125727 atatggcaaaccaatttg 125710
>emb|AJ427453.1|VFA427453 Vicia faba mRNA for putative potassium transporter (hak1 gene) Length = 2532 Score = 97.6 bits (49), Expect = 3e-17 Identities = 223/281 (79%) Strand = Plus / Plus Query: 125 ttctggccagtatttgtgattgctacactcgctgctatgatcgccagccaagctatgata 184 ||||||||||| || || || ||||| |||| ||||||||| || ||||| || |||||| Sbjct: 1240 ttctggccagtgttcgttatagctacgctcggtgctatgattgcaagccaggcaatgata 1299 Query: 185 tctgcaaccttctcttgcataaagcaggctatggctcttggttgctttcctaggatcaaa 244 || || || || || || | ||||| | |||||| | || ||||| || ||| |||| Sbjct: 1300 tcggctacattttcgtgtgttaagcaatcaatggctttgggatgcttccccaggctcaag 1359 Query: 245 ataatccatacctccaagaaagtcatgggtcagatttacatacctgtgatgaattggttt 304 ||||| |||||||| || || |||||||||| |||||||| || || || ||||||||| Sbjct: 1360 ataattcatacctcaaaaaagatcatgggtcaaatttacatccccgtcataaattggttt 1419 Query: 305 ctcatggtcatgtgcatcatcatcgtggccactttcaggagtacgaacgatatagcgaat 364 || ||| ||||||||||||| |||| || |||| || || | |||||| || ||| Sbjct: 1420 ctgatgatcatgtgcatcattgtcgtttacatcttcaaaagcactaccgatatcgcaaat 1479 Query: 365 gcatatggcattgctgaagttggagtcatgatggttagcac 405 || || ||||||||||||||||| || |||||||||||||| Sbjct: 1480 gcttacggcattgctgaagttggtgttatgatggttagcac 1520
>ref|NM_104706.2| Arabidopsis thaliana potassium ion transporter AT1G60160 mRNA, complete cds Length = 2484 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 123 tgttctggccagtatttgtgattgctacactcgctgctatgatcgccagccaagctatga 182 |||||||||| || ||||||||||| ||| | ||||||||||| || |||||||| |||| Sbjct: 1208 tgttctggccggtgtttgtgattgcaacattagctgctatgatagctagccaagccatga 1267 Query: 183 tatctgcaaccttctcttgcataaagcaggctatggctcttggttgctttcctaggatca 242 | || || || ||||| ||| | || || || |||||||| ||||||||||| ||| | | Sbjct: 1268 tctccgcgactttctcatgcgtcaaacaagccatggctctcggttgctttccaaggctga 1327 Query: 243 aaataatccatacctccaagaaa 265 | |||||||| || || |||||| Sbjct: 1328 agataatccacacttctaagaaa 1350 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 392 atgatggttagcactgcactggtaaccttggtgatgcttcttatatggcaaaccaat 448 |||||||||||||| | ||||||| | |||||||||||||| |||||||||||| Sbjct: 1477 atgatggttagcacagttttggtaactctagtgatgcttcttatttggcaaaccaat 1533
>gb|AC004473.1|T13D8 Arabidopsis thaliana chromosome 1 BAC T13D8, complete sequence Length = 116177 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Minus Query: 123 tgttctggccagtatttgtgattgctacactcgctgctatgatcgccagccaagctatga 182 |||||||||| || ||||||||||| ||| | ||||||||||| || |||||||| |||| Sbjct: 29657 tgttctggccggtgtttgtgattgcaacattagctgctatgatagctagccaagccatga 29598 Query: 183 tatctgcaaccttctcttgcataaagcaggctatggctcttggttgctttcctaggatca 242 | || || || ||||| ||| | || || || |||||||| ||||||||||| ||| | | Sbjct: 29597 tctccgcgactttctcatgcgtcaaacaagccatggctctcggttgctttccaaggctga 29538 Query: 243 aaataatccatacctccaagaaa 265 | |||||||| || || |||||| Sbjct: 29537 agataatccacacttctaagaaa 29515 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Minus Query: 392 atgatggttagcactgcactggtaaccttggtgatgcttcttatatggcaaaccaat 448 |||||||||||||| | ||||||| | |||||||||||||| |||||||||||| Sbjct: 29304 atgatggttagcacagttttggtaactctagtgatgcttcttatttggcaaaccaat 29248
>ref|XM_479449.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2346 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 272 ggtcagatttacatacctgtgatgaattggtttctcatggt 312 ||||||||||||||||||| ||| |||||| |||| ||||| Sbjct: 1159 ggtcagatttacatacctgagattaattggattctgatggt 1199
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 272 ggtcagatttacatacctgtgatgaattggtttctcatggt 312 ||||||||||||||||||| ||| |||||| |||| ||||| Sbjct: 28260617 ggtcagatttacatacctgagattaattggattctgatggt 28260577
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 272 ggtcagatttacatacctgtgatgaattggtttctcatggt 312 ||||||||||||||||||| ||| |||||| |||| ||||| Sbjct: 116162 ggtcagatttacatacctgagattaattggattctgatggt 116122
>emb|AJ427976.1|OSA427976 Oryza sativa HAK7 gene for putative potasium transporter, exons 1-8 Length = 5189 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 272 ggtcagatttacatacctgtgatgaattggtttctcatggt 312 ||||||||||||||||||| ||| |||||| |||| ||||| Sbjct: 2973 ggtcagatttacatacctgagattaattggattctgatggt 3013
>emb|AJ427971.1|OSA427971 Oryza sativa mRNA for putative potasium transporter (HAK7 gene) Length = 2436 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 272 ggtcagatttacatacctgtgatgaattggtttctcatggt 312 ||||||||||||||||||| ||| |||||| |||| ||||| Sbjct: 1249 ggtcagatttacatacctgagattaattggattctgatggt 1289
>dbj|AK100652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D12, full insert sequence Length = 1679 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 272 ggtcagatttacatacctgtgatgaattggtttctcatggt 312 ||||||||||||||||||| ||| |||||| |||| ||||| Sbjct: 1344 ggtcagatttacatacctgagattaattggattctgatggt 1384
>dbj|AK106582.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-E03, full insert sequence Length = 1549 Score = 48.1 bits (24), Expect = 0.025 Identities = 33/36 (91%) Strand = Plus / Plus Query: 362 aatgcatatggcattgctgaagttggagtcatgatg 397 |||||||||||||| |||||| |||| ||||||||| Sbjct: 263 aatgcatatggcatagctgaacttggggtcatgatg 298
>dbj|AB256661.1| Phragmites australis PhaHAK3 mRNA for potassium transporter, complete cds, strain: Enchi Length = 2251 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 169 cagccaagctatgatatctgcaacctt 195 |||||||||||| |||||||||||||| Sbjct: 899 cagccaagctattatatctgcaacctt 925
>dbj|AB256660.1| Phragmites australis PhaHAK3 mRNA for potassium transporter, complete cds, strain: Nanpi Length = 2423 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 169 cagccaagctatgatatctgcaacctt 195 |||||||||||| |||||||||||||| Sbjct: 1071 cagccaagctattatatctgcaacctt 1097
>dbj|AB256659.1| Phragmites australis PhaHAK3 mRNA for potassium transporter, complete cds, strain: Utsunomiya Length = 2431 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 169 cagccaagctatgatatctgcaacctt 195 |||||||||||| |||||||||||||| Sbjct: 1077 cagccaagctattatatctgcaacctt 1103
>emb|AL731896.10| Mouse DNA sequence from clone RP23-348D11 on chromosome 11 Contains a ribosomal protein L15 (Rpl15) pseudogene and a SNARE protein Ykt (0610042I15Rik) pseudogene, complete sequence Length = 226786 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 212 gctatggctcttggttgctttcctaggat 240 ||||||||||||| || |||||||||||| Sbjct: 123673 gctatggctcttgatttctttcctaggat 123701
>gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, complete sequence Length = 167652 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 ctatggctcttggttgctttcctaggat 240 ||||||||| ||||| |||||||||||| Sbjct: 22626 ctatggctcctggtttctttcctaggat 22653
>ref|XM_472422.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 555 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtcatgtgcatcatcatcg 329 |||||||||||||||||||| Sbjct: 123 ggtcatgtgcatcatcatcg 104
>ref|XM_473851.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2604 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 204 taaagcaggctatggctcttggttgctttcct 235 |||||||| | || |||||||||||||||||| Sbjct: 1397 taaagcagtcaatagctcttggttgctttcct 1428
>gb|AC158967.5| Mus musculus chromosome 1, clone RP23-39N17, complete sequence Length = 244130 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 ctatggctcttggttgctttcctaggat 240 ||||||||| ||||| |||||||||||| Sbjct: 114490 ctatggctcctggtttctttcctaggat 114517
>gb|AC007387.4| Homo sapiens BAC clone RP11-372J12 from 2, complete sequence Length = 165704 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 atacctccaagaaagtcatg 271 |||||||||||||||||||| Sbjct: 51762 atacctccaagaaagtcatg 51781
>gb|AC118473.20| Mus musculus chromosome 9, clone RP23-271C5, complete sequence Length = 234183 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 ctatggctcttggttgctttcctaggat 240 |||||||||||| || |||||||||||| Sbjct: 36876 ctatggctcttgatttctttcctaggat 36849
>gb|AC137529.3| Carollia perspicillata clone 6M17, complete sequence Length = 118381 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tggtaaccttggtgatgctt 430 |||||||||||||||||||| Sbjct: 61327 tggtaaccttggtgatgctt 61308
>gb|AC102786.7| Mus musculus chromosome 1, clone RP23-241G23, complete sequence Length = 160574 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 ctatggctcttggttgctttcctaggat 240 |||||||||||| || |||||||||||| Sbjct: 70005 ctatggctcttgatttctttcctaggat 70032
>gb|AC146819.19| Medicago truncatula clone mth2-176k6, complete sequence Length = 127131 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 tgaattggtttctcatggtc 313 |||||||||||||||||||| Sbjct: 43516 tgaattggtttctcatggtc 43497
>gb|AC164008.2| Mus musculus chromosome 1, clone RP23-311L17, complete sequence Length = 171582 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 ctatggctcttggttgctttcctaggat 240 |||||||||||| || |||||||||||| Sbjct: 15167 ctatggctcttgatttctttcctaggat 15140
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 204 taaagcaggctatggctcttggttgctttcct 235 |||||||| | || |||||||||||||||||| Sbjct: 85901 taaagcagtcaatagctcttggttgctttcct 85870
>emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtcatgtgcatcatcatcg 329 |||||||||||||||||||| Sbjct: 53834 ggtcatgtgcatcatcatcg 53815
>emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome 3, BAC clone F9D24 Length = 105306 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aaaggatattttatgattct 109 |||||||||||||||||||| Sbjct: 94961 aaaggatattttatgattct 94942
>emb|AL645843.14| Mouse DNA sequence from clone RP23-338K15 on chromosome 11 Contains a eukaryotic translation elongation factor 2 (Eef2) pseudogene, complete sequence Length = 141245 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 ctatggctcttggttgctttcctaggat 240 ||||||||| ||||| |||||||||||| Sbjct: 99167 ctatggctcctggtttctttcctaggat 99140
>emb|AL669915.8| Mouse DNA sequence from clone RP23-13B21 on chromosome 11 no genes, complete sequence Length = 193440 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 ctatggctcttggttgctttcctaggat 240 ||||||||| ||||| |||||||||||| Sbjct: 142521 ctatggctcctggtttctttcctaggat 142494
>gb|AC068896.9| Homo sapiens chromosome 10 clone RP11-464O2, complete sequence Length = 194905 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 gttctggccagtatttgtgattgc 147 ||||| |||||||||||||||||| Sbjct: 103148 gttctcgccagtatttgtgattgc 103171
>gb|AC159640.2| Mus musculus BAC clone RP24-70O22 from chromosome 12, complete sequence Length = 214955 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 ctatggctcttggttgctttcctaggat 240 |||||||||||| || |||||||||||| Sbjct: 54265 ctatggctcttgatttctttcctaggat 54238
>gb|AC156642.2| Mus musculus BAC clone RP23-254J5 from chromosome 9, complete sequence Length = 193872 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 ctatggctcttggttgctttcctaggat 240 |||||||||||| || |||||||||||| Sbjct: 32948 ctatggctcttgatttctttcctaggat 32975
>gb|AC006544.19| Homo sapiens chromosome 2 clone bac91a19 map 2p13, complete sequence Length = 234523 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 atacctccaagaaagtcatg 271 |||||||||||||||||||| Sbjct: 180879 atacctccaagaaagtcatg 180898
>gb|AC006543.7| Homo sapiens chromosome 2 clone bac172k1 map 2p13, complete sequence Length = 126228 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 atacctccaagaaagtcatg 271 |||||||||||||||||||| Sbjct: 111136 atacctccaagaaagtcatg 111155
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 204 taaagcaggctatggctcttggttgctttcct 235 |||||||| | || |||||||||||||||||| Sbjct: 30988528 taaagcagtcaatagctcttggttgctttcct 30988497 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 ggtcatgtgcatcatcatcg 329 |||||||||||||||||||| Sbjct: 20543206 ggtcatgtgcatcatcatcg 20543187
>gb|AC055745.23|AC055745 Homo sapiens 3p BAC CTC-334F4 (Caltech Human BAC Library C) complete sequence Length = 101099 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 attctgtaccagaagttctg 124 |||||||||||||||||||| Sbjct: 16073 attctgtaccagaagttctg 16092
>emb|AJ427984.1|OSA427984 Oryza sativa HAK15 gene for putative potasium transporter, exons 1-9 Length = 4590 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 204 taaagcaggctatggctcttggttgctttcct 235 |||||||| | || |||||||||||||||||| Sbjct: 2332 taaagcagtcaatagctcttggttgctttcct 2363
>dbj|AK100672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112N09, full insert sequence Length = 3130 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 204 taaagcaggctatggctcttggttgctttcct 235 |||||||| | || |||||||||||||||||| Sbjct: 1576 taaagcagtcaatagctcttggttgctttcct 1607
>gb|AC154522.3| Mus musculus BAC clone RP23-480O9 from 13, complete sequence Length = 176876 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 213 ctatggctcttggttgctttcctaggat 240 ||||||||| ||||| |||||||||||| Sbjct: 114474 ctatggctcctggtttctttcctaggat 114447
>gb|AF129479.1| Hordeum vulgare subsp. vulgare cultivar Albacete HAK2 (HAK2) mRNA, complete cds Length = 2840 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 275 cagatttacatacctgtgatgaattggtttct 306 |||||||||||||||| ||| |||||| |||| Sbjct: 1418 cagatttacatacctgagataaattggattct 1449
>dbj|AK060729.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A01, full insert sequence Length = 2884 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 204 taaagcaggctatggctcttggttgctttcct 235 |||||||| | || |||||||||||||||||| Sbjct: 949 taaagcagtcaatagctcttggttgctttcct 980
>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold Length = 1501503 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tggtaaccttggtgatgctt 430 |||||||||||||||||||| Sbjct: 508979 tggtaaccttggtgatgctt 508960
>emb|AL672025.8| Mouse DNA sequence from clone RP23-322K17 on chromosome X, complete sequence Length = 170966 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 213 ctatggctcttggttgctttcctaggat 240 ||||||||| ||||| |||||||||||| Sbjct: 144987 ctatggctcctggtttctttcctaggat 145014
>gb|AC037193.4| Homo sapiens chromosome 3 clone RP11-334L22 map 3p, complete sequence Length = 182261 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 attctgtaccagaagttctg 124 |||||||||||||||||||| Sbjct: 140960 attctgtaccagaagttctg 140979
>gb|AC066583.5| Homo sapiens chromosome 3 clone RP11-203C4 map 3p, complete sequence Length = 160785 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 attctgtaccagaagttctg 124 |||||||||||||||||||| Sbjct: 148639 attctgtaccagaagttctg 148658 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,189,834 Number of Sequences: 3902068 Number of extensions: 4189834 Number of successful extensions: 73532 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 73313 Number of HSP's gapped (non-prelim): 217 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)