ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal16j10 |
|---|---|
| Clone Library Name | barley_pub |
>KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precursor (EC| 2.7.11.1) Length = 817 Score = 67.8 bits (164), Expect = 3e-11 Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Frame = -2 Query: 470 AAQAQVNITRGSSLTPQGPTSSWLSPS-GDFAFGFQQMEGNSSSYLLAVWFDKI-----H 309 AA ++ + GSSL + SS L S G F+ GF ++ + ++ +VW+ K + Sbjct: 25 AASSRDILPLGSSLVVESYESSTLQSSDGTFSSGFYEVY--THAFTFSVWYSKTEAAAAN 82 Query: 308 EKTVVWYAKXXXXXXXXXXXXXXXXXXXLTADGLLSLRNPSGDVVWSP---RVPGVAYAR 138 KT+VW A DG + L + G VW GV AR Sbjct: 83 NKTIVWSANPDRPVHARRSALTLQK------DGNMVLTDYDGAAVWRADGNNFTGVQRAR 136 Query: 137 MLDTGNFMLVGVDGKAKWESFDFPADTILPTQVLXCGS 24 +LDTGN ++ G W+SFD P DT LPTQ++ + Sbjct: 137 LLDTGNLVIEDSGGNTVWQSFDSPTDTFLPTQLITAAT 174
>SLSG3_BRAOL (P17840) S-locus-specific glycoprotein S13 precursor (SLSG-13)| (Fragment) Length = 434 Score = 48.5 bits (114), Expect = 2e-05 Identities = 37/131 (28%), Positives = 52/131 (39%), Gaps = 9/131 (6%) Frame = -2 Query: 401 LSPSGDFAFGFQQMEGNSSSYLLAVWFDKIHEKTVVWYAKXXXXXXXXXXXXXXXXXXXL 222 +SP F GF + +SS + L +W+ K +T VW A Sbjct: 49 VSPGNVFELGFFKTT-SSSRWYLGIWYKKFPYRTYVWVANRDNPLSNDIGTLKISGNN-- 105 Query: 221 TADGLLSLRNPSGDVVWSPRVP-----GVAYARMLDTGNFMLVGVDGKAK----WESFDF 69 L L + S VWS V A +LD GNF++ + W+SFD+ Sbjct: 106 -----LVLLDHSNKSVWSTNVTRGNERSPVVAELLDNGNFVMRDSNSNNASQFLWQSFDY 160 Query: 68 PADTILPTQVL 36 P DT+LP L Sbjct: 161 PTDTLLPEMKL 171
>SLSG1_BRAOA (P22552) S-locus-specific glycoprotein BS29-1 precursor| Length = 444 Score = 48.1 bits (113), Expect = 2e-05 Identities = 41/147 (27%), Positives = 56/147 (38%), Gaps = 14/147 (9%) Frame = -2 Query: 401 LSPSGDFAFGFQQMEGNSSS-----YLLAVWFDKIH-EKTVVWYAKXXXXXXXXXXXXXX 240 +SP F GF + +S + L +W+ +T VW A Sbjct: 47 VSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLKI 106 Query: 239 XXXXXLTADGLLSLRNPSGDVVWSPRVPGVAY----ARMLDTGNFMLVGVDGKA----KW 84 L L + S VWS GVA+ A +L GNF+L A W Sbjct: 107 SHAS-------LVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLRDSKTTALDRFMW 159 Query: 83 ESFDFPADTILPTQVLXCGSAGQGTQK 3 +SFD+P DT+LP L G G +K Sbjct: 160 QSFDYPVDTLLPEMKLGRNRNGSGNEK 186
>SLSG6_BRAOL (P07761) S-locus-specific glycoprotein S6 precursor (SLSG-6)| Length = 436 Score = 48.1 bits (113), Expect = 2e-05 Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 11/133 (8%) Frame = -2 Query: 401 LSPSGDFAFGFQQMEGNSSSYLLAVWFDKIHEKTVVWYAKXXXXXXXXXXXXXXXXXXXL 222 +SP +F GF + +SS + L +W+ K+ ++T VW A + Sbjct: 50 VSPGNNFELGFFRTN-SSSRWYLGIWYKKLLDRTYVWVANRDNPLSNAIGTLKISGNNLV 108 Query: 221 TADGLLSLRNPSGDVVWSP-------RVPGVAYARMLDTGNFMLVGVDGKAK----WESF 75 LL N S VWS R+P VA +L GNF++ W+SF Sbjct: 109 ----LLGHTNKS---VWSTNLTRGNERLPVVA--ELLSNGNFVMRDSSNNDASEYLWQSF 159 Query: 74 DFPADTILPTQVL 36 D+P DT+LP L Sbjct: 160 DYPTDTLLPEMKL 172
>EP1G_DAUCA (Q39688) Epidermis-specific secreted glycoprotein EP1 precursor| (52/54-kDa medium protein) Length = 389 Score = 47.0 bits (110), Expect = 5e-05 Identities = 27/66 (40%), Positives = 34/66 (51%), Gaps = 2/66 (3%) Frame = -2 Query: 215 DGLLSLRNPSGDVVW--SPRVPGVAYARMLDTGNFMLVGVDGKAKWESFDFPADTILPTQ 42 DG L L +G V W S GV ++L GN +L GK W+SFD P DT+L Q Sbjct: 111 DGNLVLARSNGQVAWQTSTANKGVVGLKILPNGNMVLYDSKGKFLWQSFDTPTDTLLVGQ 170 Query: 41 VLXCGS 24 L G+ Sbjct: 171 SLKMGA 176
>SLSG4_BRAOL (P17841) S-locus-specific glycoprotein S14 precursor (SLSG-14)| (Fragment) Length = 434 Score = 46.6 bits (109), Expect = 6e-05 Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 14/136 (10%) Frame = -2 Query: 401 LSPSGDFAFGFQQMEGNSSSYLLAVWFDKIHEKTVVWYAKXXXXXXXXXXXXXXXXXXXL 222 +SP F GF + +SS + L +W+ K+ ++T VW A Sbjct: 47 VSPGNVFELGFFRTN-SSSRWYLGIWYKKVSDRTYVWVANRDNPLSSSIGTLK------- 98 Query: 221 TADGLLSLRNP-----SGDVVWSPRVP-----GVAYARMLDTGNFMLVGVDGKAK----W 84 +S NP S VWS + A +L GNF++ + W Sbjct: 99 -----ISGNNPCHLDHSNKSVWSTNLTRGNERSPVVADVLANGNFVMRDSNNNDASGFLW 153 Query: 83 ESFDFPADTILPTQVL 36 +SFDFP DT+LP L Sbjct: 154 QSFDFPTDTLLPEMKL 169
>SLSG0_BRAOA (P22551) S-locus-specific glycoprotein precursor| Length = 444 Score = 45.1 bits (105), Expect = 2e-04 Identities = 41/149 (27%), Positives = 56/149 (37%), Gaps = 16/149 (10%) Frame = -2 Query: 401 LSPSGDFAFGFQQMEGNSSS-----YLLAVWFDKIH-EKTVVWYAKXXXXXXXXXXXXXX 240 +SP F GF + +S + L +W+ +T VW A Sbjct: 47 VSPGDVFELGFFKTTTRNSPDGTDRWYLGIWYKTTSGHRTYVWVANRDNALHNSMGTLKI 106 Query: 239 XXXXXLTADGLLSLRNPSGDVVWSPRVPGVAY----ARMLDTGNFMLVGVDGKAK----- 87 L L + S VWS GVA+ A +L GNF+L D K Sbjct: 107 SHAS-------LVLLDHSNTPVWSTNFTGVAHLPVTAELLANGNFVLR--DSKTNDLDRF 157 Query: 86 -WESFDFPADTILPTQVLXCGSAGQGTQK 3 W+SFD+P DT+LP L G +K Sbjct: 158 MWQSFDYPVDTLLPEMKLGRNLIGSENEK 186
>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor| precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 Score = 45.1 bits (105), Expect = 2e-04 Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 8/130 (6%) Frame = -2 Query: 401 LSPSGDFAFGFQQMEGNSSSYLLAVWFDKIHEKTVVWYAKXXXXXXXXXXXXXXXXXXXL 222 +SP F GF + +S + L +W+ K+ ++T VW A Sbjct: 51 VSPGSIFEVGFFR---TNSRWYLGMWYKKVSDRTYVWVANRDNPLSNAIGTLKI------ 101 Query: 221 TADGLLSLRNPSGDVVWSPRVPG----VAYARMLDTGNFMLVGVDGKAK----WESFDFP 66 + + L+ L + + V W+ G A +L GNF++ W+SFD+P Sbjct: 102 SGNNLVLLDHSNKPVWWTNLTRGNERSPVVAELLANGNFVMRDSSNNDASEYLWQSFDYP 161 Query: 65 ADTILPTQVL 36 DT+LP L Sbjct: 162 TDTLLPEMKL 171
>SLSG2_BRAOA (P22553) S-locus-specific glycoprotein BS29-2 precursor| Length = 435 Score = 44.7 bits (104), Expect = 2e-04 Identities = 38/133 (28%), Positives = 55/133 (41%), Gaps = 11/133 (8%) Frame = -2 Query: 401 LSPSGDFAFGFQQMEGNSSSYLLAVWFDKIHEKTVVWYAKXXXXXXXXXXXXXXXXXXXL 222 +SP GF + +SS + L +W+ K+ E+T VW A Sbjct: 49 VSPGNVLELGFFRTP-SSSRWYLGMWYKKLSERTYVWVANRDNPLSCSIGTLKISNMN-- 105 Query: 221 TADGLLSLRNPSGDVVWSP-------RVPGVAYARMLDTGNFMLVGVDGKAK----WESF 75 L L + S +WS R P VA +L GNF+L + + W+SF Sbjct: 106 -----LVLLDHSNKSLWSTNHTRGNERSPVVA--ELLANGNFVLRDSNKNDRSGFLWQSF 158 Query: 74 DFPADTILPTQVL 36 D+P DT+LP L Sbjct: 159 DYPTDTLLPEMKL 171
>RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Retinitis pigmentosa| 1-like protein 1) Length = 1859 Score = 30.4 bits (67), Expect = 4.6 Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 12/172 (6%) Frame = +1 Query: 16 CPADPQXSTCVGR------MVSAGKSKLSHFALPSTPTSMKLPVSSILA*ATPGTRG-LQ 174 CP P+ TC GR S+G S+ FA P +K +PG RG L+ Sbjct: 859 CPTPPKEQTCFGRESASNGSTSSGHSRADGFAGPRRTLLVK----------SPGVRGSLE 908 Query: 175 TTSPDGLRSESSPSAVSCST--ELDGTCTGDS*LSELLLAYQTTVFSWILSNQTARRYEE 348 DG +PSA+ ++ + G+ +L+ Y+ + + + +E Sbjct: 909 EREADG---GVTPSALPYASPDAVVREWLGNIPEKPVLMTYEMADENTEVPSDGPEGPKE 965 Query: 349 ELPSICWKPN---AKSPEGESHELVGPWGVKEEPRVMFTCAWAADETPSSSS 495 + + +P+ + PEG ++E P GV P + C D P ++S Sbjct: 966 DSLKVLGEPSQAKQQPPEGATNEHPEPAGVLSGPGSV-CCRLGGDLHPDATS 1016
>CN044_HUMAN (Q96MY7) Protein C14orf44| Length = 647 Score = 30.4 bits (67), Expect = 4.6 Identities = 13/21 (61%), Positives = 16/21 (76%) Frame = -3 Query: 427 RPRGQPAHGSRPPATSRSVSN 365 RP+ QP GSRPP+ RSVS+ Sbjct: 144 RPQTQPPSGSRPPSQHRSVSS 164
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/54 (33%), Positives = 27/54 (50%) Frame = +1 Query: 73 SKLSHFALPSTPTSMKLPVSSILA*ATPGTRGLQTTSPDGLRSESSPSAVSCST 234 ++ H A +TP S P+SS+L P TT P L + ++ +A S ST Sbjct: 1079 TEAEHTATATTPGSTPSPLSSLLPPPPPVATATATTVPATLAATTAAAATSFST 1132
>RPIA_PHOPR (Q6LMP0) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 219 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +3 Query: 222 ELQHGAGWHLHR*LLTVGAALGIPNDSL---FMDLVEPDGEEVRGGVTFHLLETER 380 E++ AGW +T G+ +G+ S F+D +E EE++G V+ + TER Sbjct: 5 EMKKAAGWAALE-YVTKGSIVGVGTGSTVNHFIDALETRKEEIKGAVSSSVASTER 59 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,734,769 Number of Sequences: 219361 Number of extensions: 2381809 Number of successful extensions: 7083 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 6679 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7076 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
