ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal16j10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474822.1| Oryza sativa (japonica cultivar-group), predic... 74 6e-10
2emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4,... 74 6e-10
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
4dbj|AK100764.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
5emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 74 6e-10
6ref|XM_474821.1| Oryza sativa (japonica cultivar-group), predic... 66 2e-07
7ref|XM_474820.1| Oryza sativa (japonica cultivar-group), predic... 66 2e-07
8dbj|AK065145.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
9dbj|AK121955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
10ref|XM_472856.1| Oryza sativa (japonica cultivar-group), predic... 48 0.036
11emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4,... 48 0.036
12dbj|AK068631.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.036
13ref|XM_474819.1| Oryza sativa (japonica cultivar-group), predic... 46 0.14
14gb|AC148711.1| Macaca mulatta Major Histocompatibility Complex B... 44 0.56
15gb|AC148668.1| Macaca mulatta Major Histocompatibility Complex B... 44 0.56
16gb|AE014180.1| Mus musculus piebald deletion region section 8 of... 42 2.2
17gb|AC141878.4| Mus musculus BAC clone RP24-257N14 from 14, compl... 42 2.2
18gb|AY169968.1| Simian immunodeficiency virus isolate SIVcpzCAM13... 40 8.7
19gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, co... 40 8.7
20emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 ... 40 8.7
21ref|XM_750470.1| Aspergillus fumigatus Af293 HLH transcription f... 40 8.7
22dbj|BS000633.3| Pan troglodytes chromosome Y clone: PTB-483C22, ... 40 8.7
23dbj|BS000585.1| Pan troglodytes chromosome Y clone:PTB-582H02, c... 40 8.7
24emb|AL954206.1| Pan troglodytes chromosome 22 clone PTB-052N04 m... 40 8.7
25gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 8.7
26gb|AC010972.3|AC010972 Homo sapiens clone RP11-133D3, complete s... 40 8.7
27gb|AC147710.3| Pan troglodytes BAC clone CH251-473C15 from chrom... 40 8.7
28dbj|AP000033.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 8.7
29gb|AC106715.5| Homo sapiens 3 BAC RP11-695J20 (Roswell Park Canc... 40 8.7
30gb|AY744396.1| Uncultured proteobacterium RedeBAC7D11 contig 0, ... 40 8.7
31dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 8.7
32emb|BX294183.17| Mouse DNA sequence from clone RP24-388B10 on ch... 40 8.7
33dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.7
34gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 8.7
35emb|AL627204.7| Mouse DNA sequence from clone RP23-118E21 on chr... 40 8.7
36dbj|AP000266.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.7
37dbj|AP000178.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 8.7
38dbj|AP000102.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 8.7 
>ref|XM_474822.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2415

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 94/113 (83%)
 Strand = Plus / Minus

                                                                       
Query: 312 gatcttgtcgaaccagacggcgaggaggtacgaggaggagttaccttccatttgttggaa 371
           |||||||| |||||||| ||||||||||||  |||||||||| || || ||  |  ||||
Sbjct: 213 gatcttgttgaaccagatggcgaggaggtagaaggaggagttgccatcgatgggccggaa 154

                                                                
Query: 372 accgaacgcgaagtcgccggagggcgagagccatgagctggttggcccctggg 424
            || |||||||||||||| || ||||||||||||| | || ||||||| ||||
Sbjct: 153 tccaaacgcgaagtcgcctgatggcgagagccatgcgttgtttggcccttggg 101
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>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05,
              complete sequence
          Length = 149134

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                          
Query: 312    gatcttgtcgaaccagacggcgaggaggtacgaggaggagttaccttccatttgttggaa 371
              |||||||| |||||||| ||||||||||||  |||||||||| || || ||  |  ||||
Sbjct: 103836 gatcttgttgaaccagatggcgaggaggtagaaggaggagttgccatcgatgggccggaa 103895

                                                                   
Query: 372    accgaacgcgaagtcgccggagggcgagagccatgagctggttggcccctggg 424
               || |||||||||||||| || ||||||||||||| | || ||||||| ||||
Sbjct: 103896 tccaaacgcgaagtcgcctgatggcgagagccatgcgttgtttggcccttggg 103948



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                         
Query: 289   taccaaacgacagtcttttcatggatcttgtcgaaccagacggcgaggaggtacgaggag 348
             ||||| ||||| ||||| |||  |||||||| ||||||||||||||| ||||| ||||||
Sbjct: 93597 taccagacgacggtcttgtcagcgatcttgttgaaccagacggcgagcaggtaagaggag 93656

                  
Query: 349   gagtt 353
             |||||
Sbjct: 93657 gagtt 93661



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                         
Query: 281   tcttggcataccaaacgacagtcttttcatggatcttgtcgaaccagacggcgaggaggt 340
             ||||||||||||| | ||| ||||| |||  |||||||| ||||||||| ||||| ||||
Sbjct: 82474 tcttggcataccagatgacggtcttgtcagcgatcttgttgaaccagacagcgagcaggt 82533

                          
Query: 341   acgaggaggagtt 353
             | |||||||||||
Sbjct: 82534 atgaggaggagtt 82546



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 35    aaagcacttgtgtgggcaggatggtatcag 64
             |||||||||||||||| |||||||||||||
Sbjct: 93340 aaagcacttgtgtgggtaggatggtatcag 93369



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 37    agcacttgtgtgggcaggatggtatcag 64
             |||||||||||||| |||||||||||||
Sbjct: 82227 agcacttgtgtgggtaggatggtatcag 82254



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                         
Query: 313   atcttgtcgaaccagacggcgaggaggtacgaggaggagttaccttccatttgttggaaa 372
             ||||||| |||||||||||||| ||||||  |||||| ||| || || |   || |||| 
Sbjct: 67304 atcttgttgaaccagacggcgatgaggtagaaggaggtgttgccctctacaggtcggaag 67363

                                                
Query: 373   ccgaacgcgaagtcgccggagggcgagagccatga 407
             || || ||||||||||| ||||| || ||||||||
Sbjct: 67364 ccaaatgcgaagtcgccagagggtgatagccatga 67398
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                           
Query: 312     gatcttgtcgaaccagacggcgaggaggtacgaggaggagttaccttccatttgttggaa 371
               |||||||| |||||||| ||||||||||||  |||||||||| || || ||  |  ||||
Sbjct: 6940965 gatcttgttgaaccagatggcgaggaggtagaaggaggagttgccatcgatgggccggaa 6941024

                                                                    
Query: 372     accgaacgcgaagtcgccggagggcgagagccatgagctggttggcccctggg 424
                || |||||||||||||| || ||||||||||||| | || ||||||| ||||
Sbjct: 6941025 tccaaacgcgaagtcgcctgatggcgagagccatgcgttgtttggcccttggg 6941077



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                           
Query: 289     taccaaacgacagtcttttcatggatcttgtcgaaccagacggcgaggaggtacgaggag 348
               ||||| ||||| ||||| |||  |||||||| ||||||||||||||| ||||| ||||||
Sbjct: 6930726 taccagacgacggtcttgtcagcgatcttgttgaaccagacggcgagcaggtaagaggag 6930785

                    
Query: 349     gagtt 353
               |||||
Sbjct: 6930786 gagtt 6930790



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                           
Query: 281     tcttggcataccaaacgacagtcttttcatggatcttgtcgaaccagacggcgaggaggt 340
               ||||||||||||| | ||| ||||| |||  |||||||| ||||||||| ||||| ||||
Sbjct: 6919603 tcttggcataccagatgacggtcttgtcagcgatcttgttgaaccagacagcgagcaggt 6919662

                            
Query: 341     acgaggaggagtt 353
               | |||||||||||
Sbjct: 6919663 atgaggaggagtt 6919675



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 35      aaagcacttgtgtgggcaggatggtatcag 64
               |||||||||||||||| |||||||||||||
Sbjct: 6930469 aaagcacttgtgtgggtaggatggtatcag 6930498



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 314      tcttgtcgaaccagacggcgaggaggta 341
                ||||||||||||||||||| ||||||||
Sbjct: 23745605 tcttgtcgaaccagacggcaaggaggta 23745578



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 37      agcacttgtgtgggcaggatggtatcag 64
               |||||||||||||| |||||||||||||
Sbjct: 6919356 agcacttgtgtgggtaggatggtatcag 6919383



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                           
Query: 313     atcttgtcgaaccagacggcgaggaggtacgaggaggagttaccttccatttgttggaaa 372
               ||||||| |||||||||||||| ||||||  |||||| ||| || || |   || |||| 
Sbjct: 6904433 atcttgttgaaccagacggcgatgaggtagaaggaggtgttgccctctacaggtcggaag 6904492

                                                  
Query: 373     ccgaacgcgaagtcgccggagggcgagagccatga 407
               || || ||||||||||| ||||| || ||||||||
Sbjct: 6904493 ccaaatgcgaagtcgccagagggtgatagccatga 6904527
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>dbj|AK100764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119J06, full
            insert sequence
          Length = 2558

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                        
Query: 312  gatcttgtcgaaccagacggcgaggaggtacgaggaggagttaccttccatttgttggaa 371
            |||||||| |||||||| ||||||||||||  |||||||||| || || ||  |  ||||
Sbjct: 2321 gatcttgttgaaccagatggcgaggaggtagaaggaggagttgccatcgatgggccggaa 2380

                                                                 
Query: 372  accgaacgcgaagtcgccggagggcgagagccatgagctggttggcccctggg 424
             || |||||||||||||| || ||||||||||||| | || ||||||| ||||
Sbjct: 2381 tccaaacgcgaagtcgcctgatggcgagagccatgcgttgtttggcccttggg 2433
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>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete
              sequence
          Length = 140069

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 94/113 (83%)
 Strand = Plus / Plus

                                                                          
Query: 312    gatcttgtcgaaccagacggcgaggaggtacgaggaggagttaccttccatttgttggaa 371
              |||||||| |||||||| ||||||||||||  |||||||||| || || ||  |  ||||
Sbjct: 134936 gatcttgttgaaccagatggcgaggaggtagaaggaggagttgccatcgatgggccggaa 134995

                                                                   
Query: 372    accgaacgcgaagtcgccggagggcgagagccatgagctggttggcccctggg 424
               || |||||||||||||| || ||||||||||||| | || ||||||| ||||
Sbjct: 134996 tccaaacgcgaagtcgcctgatggcgagagccatgcgttgtttggcccttggg 135048



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                          
Query: 289    taccaaacgacagtcttttcatggatcttgtcgaaccagacggcgaggaggtacgaggag 348
              ||||| ||||| ||||| |||  |||||||| ||||||||||||||| ||||| ||||||
Sbjct: 123072 taccagacgacggtcttctcagcgatcttgttgaaccagacggcgagcaggtaagaggag 123131

                   
Query: 349    gagtt 353
              |||||
Sbjct: 123132 gagtt 123136



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 35     aaagcacttgtgtgggcaggatggtatcag 64
              |||||||||||||||| |||||||||||||
Sbjct: 122815 aaagcacttgtgtgggtaggatggtatcag 122844



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 37     agcacttgtgtgggcaggatggtatcag 64
              |||||||||||||| |||||||||||||
Sbjct: 112959 agcacttgtgtgggtaggatggtatcag 112986



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Plus

                                                                          
Query: 313    atcttgtcgaaccagacggcgaggaggtacgaggaggagttaccttccatttgttggaaa 372
              ||||||| |||||||||||||| ||||||  |||||| ||| || || |   || |||| 
Sbjct: 101009 atcttgttgaaccagacggcgatgaggtagaaggaggtgttgccctctacaggtcggaag 101068

                                                 
Query: 373    ccgaacgcgaagtcgccggagggcgagagccatga 407
              || || ||||||||||| ||||| || ||||||||
Sbjct: 101069 ccaaatgcgaagtcgccagagggtgatagccatga 101103
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>ref|XM_474821.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1464

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 289 taccaaacgacagtcttttcatggatcttgtcgaaccagacggcgaggaggtacgaggag 348
           ||||| ||||| ||||| |||  |||||||| ||||||||||||||| ||||| ||||||
Sbjct: 239 taccagacgacggtcttgtcagcgatcttgttgaaccagacggcgagcaggtaagaggag 180

                
Query: 349 gagtt 353
           |||||
Sbjct: 179 gagtt 175



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                         
Query: 35  aaagcacttgtgtgggcaggatggtatcag 64
           |||||||||||||||| |||||||||||||
Sbjct: 496 aaagcacttgtgtgggtaggatggtatcag 467
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>ref|XM_474820.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2436

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                       
Query: 281 tcttggcataccaaacgacagtcttttcatggatcttgtcgaaccagacggcgaggaggt 340
           ||||||||||||| | ||| ||||| |||  |||||||| ||||||||| ||||| ||||
Sbjct: 247 tcttggcataccagatgacggtcttgtcagcgatcttgttgaaccagacagcgagcaggt 188

                        
Query: 341 acgaggaggagtt 353
           | |||||||||||
Sbjct: 187 atgaggaggagtt 175



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 37  agcacttgtgtgggcaggatggtatcag 64
           |||||||||||||| |||||||||||||
Sbjct: 494 agcacttgtgtgggtaggatggtatcag 467
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>dbj|AK065145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A21, full
            insert sequence
          Length = 2934

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                        
Query: 281  tcttggcataccaaacgacagtcttttcatggatcttgtcgaaccagacggcgaggaggt 340
            ||||||||||||| | ||| ||||| |||  |||||||| ||||||||| ||||| ||||
Sbjct: 2240 tcttggcataccagatgacggtcttgtcagcgatcttgttgaaccagacagcgagcaggt 2299

                         
Query: 341  acgaggaggagtt 353
            | |||||||||||
Sbjct: 2300 atgaggaggagtt 2312



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 37   agcacttgtgtgggcaggatggtatcag 64
            |||||||||||||| |||||||||||||
Sbjct: 1993 agcacttgtgtgggtaggatggtatcag 2020
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>dbj|AK121955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107M11, full
            insert sequence
          Length = 3101

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                        
Query: 281  tcttggcataccaaacgacagtcttttcatggatcttgtcgaaccagacggcgaggaggt 340
            ||||||||||||| | ||| ||||| |||  |||||||| | ||||||| ||||| ||||
Sbjct: 2359 tcttggcataccagatgacggtcttgtcagcgatcttgttggaccagacagcgagcaggt 2418

                         
Query: 341  acgaggaggagtt 353
            | |||||||||||
Sbjct: 2419 atgaggaggagtt 2431



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 37   agcacttgtgtgggcaggatggtatcag 64
            |||||||||||||| |||||||||||||
Sbjct: 2112 agcacttgtgtgggtaggatggtatcag 2139
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>ref|XM_472856.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2385

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 314 tcttgtcgaaccagacggcgaggaggta 341
           ||||||||||||||||||| ||||||||
Sbjct: 202 tcttgtcgaaccagacggcaaggaggta 175
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>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21,
             complete sequence
          Length = 160155

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 314   tcttgtcgaaccagacggcgaggaggta 341
             ||||||||||||||||||| ||||||||
Sbjct: 66517 tcttgtcgaaccagacggcaaggaggta 66490
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>dbj|AK068631.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154A01, full
            insert sequence
          Length = 3047

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 314  tcttgtcgaaccagacggcgaggaggta 341
            ||||||||||||||||||| ||||||||
Sbjct: 2378 tcttgtcgaaccagacggcaaggaggta 2405
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>ref|XM_474819.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2442

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 77/95 (81%)
 Strand = Plus / Minus

                                                                       
Query: 313 atcttgtcgaaccagacggcgaggaggtacgaggaggagttaccttccatttgttggaaa 372
           ||||||| |||||||||||||| ||||||  |||||| ||| || || |   || |||| 
Sbjct: 209 atcttgttgaaccagacggcgatgaggtagaaggaggtgttgccctctacaggtcggaag 150

                                              
Query: 373 ccgaacgcgaagtcgccggagggcgagagccatga 407
           || || ||||||||||| ||||| || ||||||||
Sbjct: 149 ccaaatgcgaagtcgccagagggtgatagccatga 115
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>gb|AC148711.1| Macaca mulatta Major Histocompatibility Complex BAC MMU404O15, complete
             sequence
          Length = 157177

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 352   ttaccttccatttgttggaaac 373
             ||||||||||||||||||||||
Sbjct: 10092 ttaccttccatttgttggaaac 10113
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>gb|AC148668.1| Macaca mulatta Major Histocompatibility Complex BAC MMU038L02, complete
              sequence
          Length = 168263

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 352    ttaccttccatttgttggaaac 373
              ||||||||||||||||||||||
Sbjct: 167574 ttaccttccatttgttggaaac 167595
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>gb|AE014180.1| Mus musculus piebald deletion region section 8 of 11 of the complete
              sequence
          Length = 400029

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 483    cagcagcagtagcaagaactg 503
              |||||||||||||||||||||
Sbjct: 287185 cagcagcagtagcaagaactg 287165
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>gb|AC141878.4| Mus musculus BAC clone RP24-257N14 from 14, complete sequence
          Length = 192097

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 483    cagcagcagtagcaagaactg 503
              |||||||||||||||||||||
Sbjct: 137043 cagcagcagtagcaagaactg 137023
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>gb|AY169968.1| Simian immunodeficiency virus isolate SIVcpzCAM13, complete genome
          Length = 9284

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 538  tttttgctttggttggtgcc 557
            ||||||||||||||||||||
Sbjct: 7306 tttttgctttggttggtgcc 7287
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>gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, complete sequence
          Length = 178150

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   tgccattgcttttttgcttt 547
             ||||||||||||||||||||
Sbjct: 11594 tgccattgcttttttgcttt 11613
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>emb|AL954205.1| Pan troglodytes chromosome 22 clone RP43-046M07 map q21.1, complete
              sequence
          Length = 174216

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     cactttgctttgccatctac 104
              ||||||||||||||||||||
Sbjct: 159373 cactttgctttgccatctac 159392
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>ref|XM_750470.1| Aspergillus fumigatus Af293 HLH transcription factor (Afu2g12310)
            partial mRNA
          Length = 1263

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 448  atgttcacttgtgcctgggc 467
            ||||||||||||||||||||
Sbjct: 1104 atgttcacttgtgcctgggc 1123
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>dbj|BS000633.3| Pan troglodytes chromosome Y clone: PTB-483C22, complete sequence
          Length = 129300

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    gtcttttcatggatcttgtc 320
              ||||||||||||||||||||
Sbjct: 108506 gtcttttcatggatcttgtc 108525
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>dbj|BS000585.1| Pan troglodytes chromosome Y clone:PTB-582H02, complete sequence
          Length = 140513

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  gtcttttcatggatcttgtc 320
            ||||||||||||||||||||
Sbjct: 2101 gtcttttcatggatcttgtc 2120
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>emb|AL954206.1| Pan troglodytes chromosome 22 clone PTB-052N04 map q21.1, complete
              sequence
          Length = 153753

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     cactttgctttgccatctac 104
              ||||||||||||||||||||
Sbjct: 109460 cactttgctttgccatctac 109479
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 301      gtcttttcatggatcttgtc 320
                ||||||||||||||||||||
Sbjct: 20211656 gtcttttcatggatcttgtc 20211637
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>gb|AC010972.3|AC010972 Homo sapiens clone RP11-133D3, complete sequence
          Length = 114637

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 301  gtcttttcatggatcttgtc 320
            ||||||||||||||||||||
Sbjct: 5932 gtcttttcatggatcttgtc 5951
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>gb|AC147710.3| Pan troglodytes BAC clone CH251-473C15 from chromosome y, complete
             sequence
          Length = 200403

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   gtcttttcatggatcttgtc 320
             ||||||||||||||||||||
Sbjct: 96644 gtcttttcatggatcttgtc 96663
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>dbj|AP000033.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 4/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    cactttgctttgccatctac 104
             ||||||||||||||||||||
Sbjct: 84881 cactttgctttgccatctac 84862
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>gb|AC106715.5| Homo sapiens 3 BAC RP11-695J20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 150222

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 81    ctcccactttgctttgccatctac 104
             |||||||||||||||||| |||||
Sbjct: 74393 ctcccactttgctttgccttctac 74370
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>gb|AY744396.1| Uncultured proteobacterium RedeBAC7D11 contig 0, complete sequence
          Length = 61985

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 535   gcttttttgctttggttggt 554
             ||||||||||||||||||||
Sbjct: 55088 gcttttttgctttggttggt 55069
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 320     cgaaccagacggcgaggagg 339
               ||||||||||||||||||||
Sbjct: 1783176 cgaaccagacggcgaggagg 1783157
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>emb|BX294183.17| Mouse DNA sequence from clone RP24-388B10 on chromosome X, complete
             sequence
          Length = 184943

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 80    tctcccactttgctttgccatcta 103
             |||||||| |||||||||||||||
Sbjct: 15282 tctcccaccttgctttgccatcta 15259
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>dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, section 57/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     cactttgctttgccatctac 104
              ||||||||||||||||||||
Sbjct: 289179 cactttgctttgccatctac 289198
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 320     cgaaccagacggcgaggagg 339
               ||||||||||||||||||||
Sbjct: 1458910 cgaaccagacggcgaggagg 1458891
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>emb|AL627204.7| Mouse DNA sequence from clone RP23-118E21 on chromosome 4, complete
             sequence
          Length = 142447

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 412   gttggcccctggggcgtcaaggag 435
             ||||||||||||| ||||||||||
Sbjct: 44678 gttggcccctgggccgtcaaggag 44701
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>dbj|AP000266.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:T255, complete sequence
          Length = 65058

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cactttgctttgccatctac 104
             ||||||||||||||||||||
Sbjct: 62282 cactttgctttgccatctac 62301
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>dbj|AP000178.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 5/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cactttgctttgccatctac 104
             ||||||||||||||||||||
Sbjct: 52018 cactttgctttgccatctac 52037
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>dbj|AP000102.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 5/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cactttgctttgccatctac 104
             ||||||||||||||||||||
Sbjct: 52018 cactttgctttgccatctac 52037


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,906,213
Number of Sequences: 3902068
Number of extensions: 4906213
Number of successful extensions: 99211
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98981
Number of HSP's gapped (non-prelim): 221
length of query: 636
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 613
effective length of database: 17,143,297,704
effective search space: 10508841492552
effective search space used: 10508841492552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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