ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal16j09 |
|---|---|
| Clone Library Name | barley_pub |
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 65.9 bits (159), Expect = 6e-11 Identities = 27/53 (50%), Positives = 39/53 (73%) Frame = +1 Query: 106 KEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDS 264 +E C+ PEG LCVNNCGFFGS+ATMN+CS C+ ++ +K++Q S+ +S Sbjct: 3 EEHRCETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVES 55 Score = 45.1 bits (105), Expect = 1e-04 Identities = 18/26 (69%), Positives = 20/26 (76%) Frame = +2 Query: 419 PRGRRGPNRCSTCRKRVGLTGFNCRC 496 P + PNRC+ CRKRVGLTGF CRC Sbjct: 93 PSPPQRPNRCTVCRKRVGLTGFMCRC 118
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 54.7 bits (130), Expect = 1e-07 Identities = 23/58 (39%), Positives = 35/58 (60%) Frame = +1 Query: 100 EHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDSIVN 273 E ++ P P LCV CGFFGS + MN+CSKC++++ EEQ A ++ + +N Sbjct: 4 EQNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLN 61 Score = 35.4 bits (80), Expect = 0.085 Identities = 12/18 (66%), Positives = 15/18 (83%) Frame = +2 Query: 443 RCSTCRKRVGLTGFNCRC 496 RC +C K+VG+TGF CRC Sbjct: 108 RCLSCNKKVGVTGFKCRC 125
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 51.2 bits (121), Expect = 1e-06 Identities = 20/43 (46%), Positives = 30/43 (69%) Frame = +1 Query: 127 PEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASS 255 P P LC N CGFFGS + MN+CSKC++ + +E+Q +A ++ Sbjct: 13 PTEPKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKAA 55 Score = 34.7 bits (78), Expect = 0.14 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +2 Query: 431 RGPNRCSTCRKRVGLTGFNCRC 496 R NRC +C K+VG+ GF C+C Sbjct: 111 RPNNRCFSCNKKVGVMGFKCKC 132
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 44.3 bits (103), Expect = 2e-04 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +1 Query: 124 QPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQA 237 Q GP+LC CGF+G+ T MCS C+KE + +++ + Sbjct: 7 QTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 44 Score = 40.4 bits (93), Expect = 0.003 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = +2 Query: 440 NRCSTCRKRVGLTGFNCRC 496 NRC CRK+VGLTGF+CRC Sbjct: 152 NRCFMCRKKVGLTGFDCRC 170
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 44.3 bits (103), Expect = 2e-04 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +1 Query: 124 QPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQA 237 Q GP+LC CGF+G+ T MCS C+KE + +++ + Sbjct: 7 QTPGPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNS 44 Score = 40.4 bits (93), Expect = 0.003 Identities = 15/19 (78%), Positives = 17/19 (89%) Frame = +2 Query: 440 NRCSTCRKRVGLTGFNCRC 496 NRC CRK+VGLTGF+CRC Sbjct: 152 NRCFMCRKKVGLTGFDCRC 170
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 43.5 bits (101), Expect = 3e-04 Identities = 17/19 (89%), Positives = 17/19 (89%) Frame = +2 Query: 440 NRCSTCRKRVGLTGFNCRC 496 NRCS CRKRVGLTGF CRC Sbjct: 103 NRCSRCRKRVGLTGFRCRC 121 Score = 34.7 bits (78), Expect = 0.14 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 142 LCVNNCGFFGSAATMNMCSKC 204 LC N+CGF G+ AT N+C C Sbjct: 21 LCANSCGFPGNPATQNLCQNC 41
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 39.3 bits (90), Expect = 0.006 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +1 Query: 109 EAGCQQPEGPILCVN-NCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDS 264 +AG ++ + P L CGF+GS+ TMN+CSKC + K+ A S+ +S Sbjct: 3 DAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNS 55
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 38.1 bits (87), Expect = 0.013 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = +1 Query: 157 CGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDS 264 CGF+GS+ TMN+CSKC + K+ A S+ S Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDEDTAPSTSSS 55
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 37.7 bits (86), Expect = 0.017 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Frame = +1 Query: 109 EAGCQQPEGPILCVN-NCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDS 264 +AG ++ + P L CGF+GS+ TMN+CSKC + K+ S+ +S Sbjct: 3 DAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS 55
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 37.7 bits (86), Expect = 0.017 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Frame = +1 Query: 109 EAGCQQPEGPILCVN-NCGFFGSAATMNMCSKCHKEMVMKEEQAKLAASSFDS 264 +AG ++ + P L CGF+GS+ TMN+CSKC + K+ S+ +S Sbjct: 3 DAGSERSKAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNS 55
>RABX5_MOUSE (Q9JM13) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 491 Score = 37.4 bits (85), Expect = 0.022 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +1 Query: 97 MEHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKL 243 ++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 3 LKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQRQI 51
>RABX5_BOVIN (O18973) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 492 Score = 37.4 bits (85), Expect = 0.022 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +1 Query: 97 MEHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKL 243 ++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 3 LKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 51
>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated| exchange factor for Rab5) (Rabex-5) Length = 708 Score = 37.4 bits (85), Expect = 0.022 Identities = 14/49 (28%), Positives = 25/49 (51%) Frame = +1 Query: 97 MEHKEAGCQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKL 243 ++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 141 LKSERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 189
>CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 33.9 bits (76), Expect = 0.25 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +1 Query: 154 NCGFFGSAATMNMCSKCHKEMVMKEEQAKLA 246 NC F+G A T + CS C++E + + +A+ A Sbjct: 894 NCAFYGRAETEHFCSYCYREELRRRREARAA 924
>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)| (Cellular zinc finger anti-NF-kappa B protein) (Zinc finger protein Cezanne) Length = 843 Score = 32.7 bits (73), Expect = 0.55 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +1 Query: 118 CQQPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQ 234 C+QP NC F+G T N CS C++E + + E+ Sbjct: 802 CKQP--------NCSFYGHPETNNFCSCCYREELRRRER 832
>CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 32.3 bits (72), Expect = 0.72 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +1 Query: 154 NCGFFGSAATMNMCSKCHKEMVMKEEQAK 240 NC F+G A T + CS C++E + + +A+ Sbjct: 894 NCAFYGRAETEHYCSYCYREELRRRREAR 922
>AQP12_MOUSE (Q8CHJ2) Aquaporin-12A (AQP-12)| Length = 290 Score = 31.6 bits (70), Expect = 1.2 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Frame = -1 Query: 236 ACSSFMTISLWHLEHMFMVAALPKKPQLLT---HRIGP--SGCWQPASLCSILNNC 84 AC+ F +SL HL+H +V +P L+T + GP S + PA S+ +C Sbjct: 168 ACTFFFHLSLLHLQHSLLVYRVPALALLVTLMAYTAGPYTSAFFNPALAASVTFHC 223
>DMXL2_HUMAN (Q8TDJ6) Protein DmX-like 2 (Rabconnectin-3)| Length = 3036 Score = 30.0 bits (66), Expect = 3.6 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 15/97 (15%) Frame = -3 Query: 486 LNPVSPTLFLQVEHRFGPLLPLGAHGNSFAS--------AC-NISSRLHNECLH---VNL 343 L+ +P +F QV+ F +P+ +S AC N + H+ LH +++ Sbjct: 527 LDEYNPGIFRQVQVSFSSRIPVAFPSGDASSLSKNIMMYACINATKDSHHTLLHQEGMSV 586 Query: 342 SNRHLS---ARSHSRNNNRCFPTVATVNNAIKGGGSQ 241 + H S +RSHS + N PTV ++ I G +Q Sbjct: 587 GSPHGSQPHSRSHSTHMNILAPTVMMISKHIDGSLNQ 623
>DAL80_YEAST (P26343) Nitrogen regulatory protein DAL80 (Regulatory protein| UGA43) Length = 269 Score = 29.6 bits (65), Expect = 4.7 Identities = 15/57 (26%), Positives = 26/57 (45%) Frame = -3 Query: 435 PLLPLGAHGNSFASACNISSRLHNECLHVNLSNRHLSARSHSRNNNRCFPTVATVNN 265 PL HG +AC + +LH E ++L + +R+ + NN T A ++ Sbjct: 40 PLWRRDEHGTVLCNACGLFLKLHGEPRPISLKTDTIKSRNRKKLNNNNVNTNANTHS 96
>RTN4_RAT (Q9JK11) Reticulon-4 (Neurite outgrowth inhibitor) (Nogo protein)| (Foocen) (Glut4 vesicle 20 kDa protein) Length = 1163 Score = 29.6 bits (65), Expect = 4.7 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = -3 Query: 399 ASACNISSRLHNECLHVNLSNRHLSARSHSRNNNRCFPT 283 A+ N+ S++ +CL +L + L S RN + FP+ Sbjct: 390 AARANVESKVDRKCLEDSLEQKSLGKDSEGRNEDASFPS 428
>ORDL_HAEIN (P44732) Probable oxidoreductase ordL (EC 1.-.-.-)| Length = 431 Score = 28.9 bits (63), Expect = 7.9 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +1 Query: 124 QPEGPILCVNNCGFFGSAATMNMCSKCHKEMVMKEEQAKLAAS--SFDSIVNGGDGG 288 Q E +CV GFFG +A + + K K +V++ + AS S +NG + G Sbjct: 29 QIEHADVCVIGAGFFGLSAALELAEKGKKVIVLEGARVGFGASGRSGGQAINGFEEG 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.129 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,110,121 Number of Sequences: 219361 Number of extensions: 766667 Number of successful extensions: 2035 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1963 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2035 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
