>emb|AL590293.3| Human DNA sequence from clone RP11-227B10 on chromosome Xq21.33-22.3,
            complete sequence
          Length = 67911

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 30   aaatgatgtggagatgaaagttg 52
            |||||||||||||||||||||||
Sbjct: 9473 aaatgatgtggagatgaaagttg 9451

>gb|AY029558.1| Zea mays putative methyl-binding domain protein MBD105 mRNA,
           complete cds
          Length = 1777

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 293 agaaggaagatgtcaagccagctgag 318
           ||||| ||||||||||||||||||||
Sbjct: 674 agaagaaagatgtcaagccagctgag 699

>gb|BT018441.1| Zea mays clone EL01N0372H11.d mRNA sequence
          Length = 1502

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 293 agaaggaagatgtcaagccagctgag 318
           ||||| ||||||||||||||||||||
Sbjct: 290 agaagaaagatgtcaagccagctgag 315

>gb|AC146111.3| Pan troglodytes BAC clone RP43-38O16 from 7, complete sequence
          Length = 158242

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 540   ccagcaatggaagacaagaaggaag 564
             |||||| ||||||||||||||||||
Sbjct: 93081 ccagcactggaagacaagaaggaag 93057

>emb|X91855.1|PKMSP1GEN P.knowlesi MSP-1 gene
          Length = 981

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 544 caatggaagacaagaaggaag 564
           |||||||||||||||||||||
Sbjct: 893 caatggaagacaagaaggaag 913

>dbj|AP003466.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1047C11
          Length = 154371

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 443   aagatatcaagccagctgggg 463
             |||||||||||||||||||||
Sbjct: 57519 aagatatcaagccagctgggg 57539



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   aagatatcaagccagctgggg 415
             |||||||||||||||||||||
Sbjct: 57519 aagatatcaagccagctgggg 57539

>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    gtttgaagacaaggaagatg 506
              ||||||||||||||||||||
Sbjct: 836582 gtttgaagacaaggaagatg 836601

>gb|AC164294.2| Mus musculus BAC clone RP24-556J13 from chromosome 14, complete sequence
          Length = 143851

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    cccgcagaacacaaggaaga 134
              ||||||||||||||||||||
Sbjct: 138798 cccgcagaacacaaggaaga 138817

>ref|XM_475121.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1884

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 acaaggaagatgtcaaacta 144
           ||||||||||||||||||||
Sbjct: 269 acaaggaagatgtcaaacta 288

>emb|CR733881.2|CNS0GT1K Tetraodon nigroviridis full-length cDNA
          Length = 568

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 431 gttgatgaagatgtgaaagctgct 408

>emb|CR720476.2|CNS0GIV6 Tetraodon nigroviridis full-length cDNA
          Length = 577

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 457 gttgatgaagatgtgaaagctgct 434

>emb|CR717798.2|CNS0GGSS Tetraodon nigroviridis full-length cDNA
          Length = 553

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 416 gttgatgaagatgtgaaagctgct 393

>emb|CR716786.2|CNS0GG0R Tetraodon nigroviridis full-length cDNA
          Length = 526

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366

>emb|CR706085.2|CNS0G7RL Tetraodon nigroviridis full-length cDNA
          Length = 668

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 424 gttgatgaagatgtgaaagctgct 401

>emb|CR706333.2|CNS0G7YH Tetraodon nigroviridis full-length cDNA
          Length = 677

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 424 gttgatgaagacgtgaaagctgct 401

>emb|CR702087.2|CNS0G4OJ Tetraodon nigroviridis full-length cDNA
          Length = 559

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 422 gttgatgaagatgtgaaagctgct 399

>emb|CR698551.2|CNS0G1YB Tetraodon nigroviridis full-length cDNA
          Length = 558

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 425 gttgatgaagatgtgaaagctgct 402

>emb|CR688935.2|CNS0FUJ7 Tetraodon nigroviridis full-length cDNA
          Length = 580

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 443 gttgatgaagatgtgaaagctgct 420

>emb|CR686526.2|CNS0FSOA Tetraodon nigroviridis full-length cDNA
          Length = 525

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 392 gttgatgaagatgtgaaagctgct 369

>emb|CR673871.2|CNS0FIXH Tetraodon nigroviridis full-length cDNA
          Length = 595

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 462 gttgatgaagatgtgaaagctgct 439

>emb|CR632767.2|CNS0EN7P Tetraodon nigroviridis full-length cDNA
          Length = 522

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366

>emb|CR634094.2|CNS0EO8K Tetraodon nigroviridis full-length cDNA
          Length = 564

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 429 gttgatgaagatgtgaaagctgct 406

>emb|CR633412.2|CNS0ENPM Tetraodon nigroviridis full-length cDNA
          Length = 522

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366

>emb|CR632968.2|CNS0ENDA Tetraodon nigroviridis full-length cDNA
          Length = 522

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 49  gttgatgaagaggtgaaagctgct 72
           ||||||||||| ||||||||||||
Sbjct: 389 gttgatgaagacgtgaaagctgct 366

>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence
          Length = 129921

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    acaaatgatgtggagatgaa 47
             ||||||||||||||||||||
Sbjct: 64052 acaaatgatgtggagatgaa 64071

>gb|AY883559.2| Zea mays cultivar inbred line B73 teosinte glume architecture 1 (tga1)
             gene, complete cds
          Length = 169976

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 542   agcaatggaagacaagaaggaaga 565
             |||||||||||| |||||||||||
Sbjct: 77874 agcaatggaagaaaagaaggaaga 77851

>gb|AC137553.45| Medicago truncatula clone mth2-20p12, complete sequence
          Length = 134249

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    acaaatgatgtggagatgaa 47
             ||||||||||||||||||||
Sbjct: 30088 acaaatgatgtggagatgaa 30107

>gb|AC026418.4| Homo sapiens chromosome 5 clone CTD-2100N14, complete sequence
          Length = 153198

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 487   gtttgaagacaaggaagatg 506
             ||||||||||||||||||||
Sbjct: 38250 gtttgaagacaaggaagatg 38231

>gb|AC011286.7| Homo sapiens BAC clone RP11-4H21 from 2, complete sequence
          Length = 168863

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 283   gtggaagacaagaaggaagatgtcaagc 310
             ||||||| |||||||||||||| |||||
Sbjct: 48404 gtggaagtcaagaaggaagatgccaagc 48431

>gb|AC149887.2| Xenopus tropicalis clone ISB-146F11, complete sequence
          Length = 91514

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 541   cagcaatggaagacaagaag 560
             ||||||||||||||||||||
Sbjct: 67508 cagcaatggaagacaagaag 67489

>gb|AC151340.2| Xenopus tropicalis clone ISB-362A3, complete sequence
          Length = 101442

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 541   cagcaatggaagacaagaag 560
             ||||||||||||||||||||
Sbjct: 19449 cagcaatggaagacaagaag 19430

>emb|AL929259.13| Mouse DNA sequence from clone RP23-141E12 on chromosome 2, complete
             sequence
          Length = 153645

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 550   aagacaagaaggaagatgtt 569
             ||||||||||||||||||||
Sbjct: 72964 aagacaagaaggaagatgtt 72945

>emb|CT010511.9| Mouse DNA sequence from clone RP23-222I19 on chromosome 14, complete
              sequence
          Length = 181740

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    cccgcagaacacaaggaaga 134
              ||||||||||||||||||||
Sbjct: 152618 cccgcagaacacaaggaaga 152599


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,503,799
Number of Sequences: 3902068
Number of extensions: 5503799
Number of successful extensions: 108384
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108305
Number of HSP's gapped (non-prelim): 79
length of query: 590
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 567
effective length of database: 17,143,297,704
effective search space: 9720249798168
effective search space used: 9720249798168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)