ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal16j01 |
|---|---|
| Clone Library Name | barley_pub |
>PCY1B_HUMAN (Q9Y5K3) Choline-phosphate cytidylyltransferase B (EC 2.7.7.15)| (Phosphorylcholine transferase B) (CTP:phosphocholine cytidylyltransferase B) (CT B) (CCT B) (CCT-beta) Length = 369 Score = 206 bits (525), Expect = 2e-53 Identities = 98/151 (64%), Positives = 120/151 (79%) Frame = +1 Query: 28 GHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDAP 207 GHAR+L QAK FPN+YLLVG C+D+LTHKFKG TVM E ERYE+LRHC++VDEVI DAP Sbjct: 91 GHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAP 150 Query: 208 WVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIMR 387 W +T EFL KH IDFVAHD +PY +S S+DVY+ +K+ G F T+RT+GISTSDII R Sbjct: 151 WTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITR 208 Query: 388 IVKDYNEYVMRNLARGYSRNDLGVSYVKEKR 480 IV+DY+ Y RNL RGY+ +L VS++ EKR Sbjct: 209 IVRDYDVYARRNLQRGYTAKELNVSFINEKR 239
>PCY1B_RAT (Q9QZC4) Choline-phosphate cytidylyltransferase B (EC 2.7.7.15)| (Phosphorylcholine transferase B) (CTP:phosphocholine cytidylyltransferase B) (CT B) (CCT B) (CCT-beta) Length = 369 Score = 205 bits (522), Expect = 4e-53 Identities = 97/151 (64%), Positives = 120/151 (79%) Frame = +1 Query: 28 GHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDAP 207 GHAR+L QAK FPN+YLLVG C+D+LTHKFKG TVM E ERYE+LRHC++VDEVI DAP Sbjct: 91 GHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAP 150 Query: 208 WVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIMR 387 W +T EFL KH IDFVAHD +PY +S S+DVY+ +K+ G F T+RT+GISTSDII R Sbjct: 151 WTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITR 208 Query: 388 IVKDYNEYVMRNLARGYSRNDLGVSYVKEKR 480 IV+DY+ Y RNL RGY+ +L VS++ EK+ Sbjct: 209 IVRDYDVYARRNLQRGYTAKELNVSFINEKK 239
>PCY1A_RAT (P19836) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 197 bits (500), Expect = 2e-50 Identities = 90/151 (59%), Positives = 119/151 (78%) Frame = +1 Query: 28 GHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDAP 207 GHAR+L QAK FPN YL+VG C+DELTH FKG TVM E+ERY++++HC++VDEV+ +AP Sbjct: 91 GHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAP 150 Query: 208 WVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIMR 387 W +T EFL +H IDFVAHD +PY +S S+DVY+ +K+ G F T+RT+GISTSDII R Sbjct: 151 WTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITR 208 Query: 388 IVKDYNEYVMRNLARGYSRNDLGVSYVKEKR 480 IV+DY+ Y RNL RGY+ +L VS++ EK+ Sbjct: 209 IVRDYDVYARRNLQRGYTAKELNVSFINEKK 239
>PCY1A_HUMAN (P49585) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 197 bits (500), Expect = 2e-50 Identities = 90/151 (59%), Positives = 119/151 (78%) Frame = +1 Query: 28 GHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDAP 207 GHAR+L QAK FPN YL+VG C+DELTH FKG TVM E+ERY++++HC++VDEV+ +AP Sbjct: 91 GHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAP 150 Query: 208 WVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIMR 387 W +T EFL +H IDFVAHD +PY +S S+DVY+ +K+ G F T+RT+GISTSDII R Sbjct: 151 WTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITR 208 Query: 388 IVKDYNEYVMRNLARGYSRNDLGVSYVKEKR 480 IV+DY+ Y RNL RGY+ +L VS++ EK+ Sbjct: 209 IVRDYDVYARRNLQRGYTAKELNVSFINEKK 239
>PCY1A_MOUSE (P49586) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 196 bits (498), Expect = 3e-50 Identities = 90/151 (59%), Positives = 118/151 (78%) Frame = +1 Query: 28 GHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDAP 207 GHAR+L QAK FPN YL+VG C+DELTH FKG TVM E+ERY++++HC++VDEV+ +AP Sbjct: 91 GHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAP 150 Query: 208 WVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIMR 387 W +T EFL +H IDFVAHD +PY +S S+DVY+ +K G F T+RT+GISTSDII R Sbjct: 151 WTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKDAGMFAPTQRTEGISTSDIITR 208 Query: 388 IVKDYNEYVMRNLARGYSRNDLGVSYVKEKR 480 IV+DY+ Y RNL RGY+ +L VS++ EK+ Sbjct: 209 IVRDYDVYARRNLQRGYTAKELNVSFINEKK 239
>PCY1A_CRIGR (P49584) Choline-phosphate cytidylyltransferase A (EC 2.7.7.15)| (Phosphorylcholine transferase A) (CTP:phosphocholine cytidylyltransferase A) (CT A) (CCT A) (CCT-alpha) Length = 367 Score = 194 bits (493), Expect = 1e-49 Identities = 89/151 (58%), Positives = 118/151 (78%) Frame = +1 Query: 28 GHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDAP 207 GHAR+L QAK FPN Y +VG C+DELTH FKG TVM E+ERY++++HC++VDEV+ +AP Sbjct: 91 GHARALMQAKNLFPNTYPIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAP 150 Query: 208 WVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIMR 387 W +T EFL +H IDFVAHD +PY +S S+DVY+ +K+ G F T+RT+GISTSDII R Sbjct: 151 WTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITR 208 Query: 388 IVKDYNEYVMRNLARGYSRNDLGVSYVKEKR 480 IV+DY+ Y RNL RGY+ +L VS++ EK+ Sbjct: 209 IVRDYDVYARRNLQRGYTAKELNVSFINEKK 239
>PCY1_YEAST (P13259) Choline-phosphate cytidylyltransferase (EC 2.7.7.15)| (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 424 Score = 188 bits (478), Expect = 6e-48 Identities = 84/152 (55%), Positives = 120/152 (78%) Frame = +1 Query: 28 GHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDAP 207 GH + LEQ KK+FPN L+VG +D++THK KG TV+T+ +R E+L HC+WVDEV+P+AP Sbjct: 118 GHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLTDKQRCETLTHCRWVDEVVPNAP 177 Query: 208 WVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIMR 387 W VT EFL +H ID+VAHD +PY S S+D+Y+ +K++GKF T+RT+G+STSDII + Sbjct: 178 WCVTPEFLLEHKIDYVAHDDIPY--VSADSDDIYKPIKEMGKFLTTQRTNGVSTSDIITK 235 Query: 388 IVKDYNEYVMRNLARGYSRNDLGVSYVKEKRL 483 I++DY++Y+MRN ARG +R +L VS++K+ L Sbjct: 236 IIRDYDKYLMRNFARGATRQELNVSWLKKNEL 267
>PCY1_CAEEL (P49583) Putative choline-phosphate cytidylyltransferase (EC| 2.7.7.15) (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 362 Score = 176 bits (447), Expect = 2e-44 Identities = 78/147 (53%), Positives = 107/147 (72%) Frame = +1 Query: 28 GHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDAP 207 GHA L Q KK FPN YL+VG C D THK+KGRTV +E+ERY+ +RHC++VDEV +AP Sbjct: 95 GHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRTVTSEEERYDGVRHCRYVDEVYREAP 154 Query: 208 WVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIMR 387 W T EFL +DF+AHD++PY + D+YE ++ G F ET+RT+G+STSD++ R Sbjct: 155 WFCTVEFLKNLKVDFIAHDAIPY--VAPGEEDLYEKFRREGMFLETERTEGVSTSDVVCR 212 Query: 388 IVKDYNEYVMRNLARGYSRNDLGVSYV 468 I++DY++YV RNL RGYS +L V ++ Sbjct: 213 IIRDYDKYVRRNLQRGYSPKELNVGFL 239
>PCY1_PLAFK (P49587) Choline-phosphate cytidylyltransferase (EC 2.7.7.15)| (Phosphorylcholine transferase) (CTP:phosphocholine cytidylyltransferase) (CT) (CCT) Length = 370 Score = 156 bits (395), Expect = 2e-38 Identities = 77/171 (45%), Positives = 110/171 (64%), Gaps = 16/171 (9%) Frame = +1 Query: 19 LPFGHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIP 198 L GH + LEQAKK F N L+VG +D T FKG+ V T +ER E+L+H +WVDE+I Sbjct: 103 LHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQVVQTLEERTETLKHIRWVDEIIS 162 Query: 199 DAPWVVTEEFLNKHNIDFVAHDSLPYHD---------ASGAS-------NDVYEFVKKLG 330 PWVVT EFL K+ ID+VAHD +PY + + G S D+Y ++K+ G Sbjct: 163 PCPWVVTPEFLEKYKIDYVAHDDIPYANNQKKKKKKKSKGKSFSFDEENEDIYAWLKRAG 222 Query: 331 KFKETKRTDGISTSDIIMRIVKDYNEYVMRNLARGYSRNDLGVSYVKEKRL 483 KFK T+RT+G+ST+D+I+RI+K+Y +Y+ R+L RG N+L + K + + Sbjct: 223 KFKATQRTEGVSTTDLIVRILKNYEDYIERSLQRGIHPNELNIGVTKAQSI 273
>PCY2_RAT (O88637) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 404 Score = 103 bits (258), Expect = 2e-22 Identities = 54/123 (43%), Positives = 77/123 (62%) Frame = +1 Query: 25 FGHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDA 204 +GH+ L QA+ YL+VG DE K KG V T++ERY+ ++ KWVDEV+P A Sbjct: 36 YGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAA 93 Query: 205 PWVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIM 384 P+V T E L+KHN DF H + G D YE VK+ G+++E KRT G+ST+D++ Sbjct: 94 PYVTTLETLDKHNCDFCVHGNDITLTVDG--RDTYEEVKQAGRYRECKRTQGVSTTDLVG 151 Query: 385 RIV 393 R++ Sbjct: 152 RML 154 Score = 70.9 bits (172), Expect = 2e-12 Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 5/137 (3%) Frame = +1 Query: 28 GHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRT--VMTEDERYESLRHCKWVDEVIPD 201 GH L++ K Y++ G D+ +++KG+ +M ER S+ C++V EV+ Sbjct: 246 GHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSVLACRYVSEVVIG 305 Query: 202 APWVVTEEFLNKHNIDFVAH---DSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTS 372 AP+ VT E LN +D V H + +P D S D YE K+ G F + ++T Sbjct: 306 APYSVTAELLNHFKVDLVCHGKTEIVPDRDGS----DPYEEPKRRGIFCQIDSGSDLTTD 361 Query: 373 DIIMRIVKDYNEYVMRN 423 I+ RI+K+ EY RN Sbjct: 362 LIVQRIIKNRLEYEARN 378
>PCY2_MOUSE (Q922E4) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 404 Score = 103 bits (258), Expect = 2e-22 Identities = 54/123 (43%), Positives = 77/123 (62%) Frame = +1 Query: 25 FGHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDA 204 +GH+ L QA+ YL+VG DE K KG V T++ERY+ ++ KWVDEV+P A Sbjct: 36 YGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAA 93 Query: 205 PWVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIM 384 P+V T E L+KHN DF H + G D YE VK+ G+++E KRT G+ST+D++ Sbjct: 94 PYVTTLETLDKHNCDFCVHGNDITLTVDG--RDTYEEVKQAGRYRECKRTQGVSTTDLVG 151 Query: 385 RIV 393 R++ Sbjct: 152 RML 154 Score = 70.1 bits (170), Expect = 3e-12 Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 5/137 (3%) Frame = +1 Query: 28 GHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRT--VMTEDERYESLRHCKWVDEVIPD 201 GH L++ K Y++ G D+ +++KG+ +M ER S+ C++V EV+ Sbjct: 246 GHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSVLACRYVSEVVIG 305 Query: 202 APWVVTEEFLNKHNIDFVAH---DSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTS 372 AP+ VT E LN +D V H + +P D S D Y+ K+ G F + ++T Sbjct: 306 APYSVTAELLNHFKVDLVCHGKTEIVPDRDGS----DPYQEPKRRGIFYQIDSGSDLTTD 361 Query: 373 DIIMRIVKDYNEYVMRN 423 I+ RI+K+ EY RN Sbjct: 362 LIVQRIIKNRLEYEARN 378
>PCY2_HUMAN (Q99447) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 389 Score = 101 bits (252), Expect = 9e-22 Identities = 53/123 (43%), Positives = 77/123 (62%) Frame = +1 Query: 25 FGHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDA 204 +GH+ L QA+ YL+VG DE K KG V T++ERY+ ++ KWVDEV+P A Sbjct: 36 YGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAA 93 Query: 205 PWVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIM 384 P+V T E L+K+N DF H + G D YE VK+ G+++E KRT G+ST+D++ Sbjct: 94 PYVTTLETLDKYNCDFCVHGNDITLTVDG--RDTYEEVKQAGRYRECKRTQGVSTTDLVG 151 Query: 385 RIV 393 R++ Sbjct: 152 RML 154 Score = 67.8 bits (164), Expect = 1e-11 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 5/137 (3%) Frame = +1 Query: 28 GHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRT--VMTEDERYESLRHCKWVDEVIPD 201 GH LE+ + Y++ G D+ + +KG+ +M ER S+ C++V EV+ Sbjct: 228 GHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVVIG 287 Query: 202 APWVVTEEFLNKHNIDFVAH---DSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTS 372 AP+ VT E L+ +D V H + +P D S D Y+ K+ G F++ ++T Sbjct: 288 APYAVTAELLSHFKVDLVCHGKTEIIPDRDGS----DPYQEPKRRGIFRQIDSGSNLTTD 343 Query: 373 DIIMRIVKDYNEYVMRN 423 I+ RI+ + EY RN Sbjct: 344 LIVQRIITNRLEYEARN 360
>ECT1_SCHPO (Q9UTI6) Probable ethanolamine-phosphate cytidylyltransferase (EC| 2.7.7.14) (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 365 Score = 86.3 bits (212), Expect = 4e-17 Identities = 46/123 (37%), Positives = 74/123 (60%) Frame = +1 Query: 25 FGHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDA 204 +GH+ ++ QAK+ L++G +DE KG VMT +ER S CKWVDEV+P A Sbjct: 22 YGHSNAILQAKQL--GETLVIGIHSDEEITLNKGPPVMTLEERCLSANTCKWVDEVVPSA 79 Query: 205 PWVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIM 384 P+V E++ ++ +V H DA+G +D Y F K ++ E KRT+G+ST++++ Sbjct: 80 PYVFDLEWMRRYGCQYVVHGDDISTDANG--DDCYRFAKAADQYLEVKRTEGVSTTELLD 137 Query: 385 RIV 393 R++ Sbjct: 138 RLL 140
>ECT1_YEAST (P33412) Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14)| (Phosphorylethanolamine transferase) (CTP:phosphoethanolamine cytidylyltransferase) Length = 323 Score = 85.1 bits (209), Expect = 9e-17 Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 2/124 (1%) Frame = +1 Query: 28 GHARSLEQAKK--SFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPD 201 GHA ++ QA++ S N L G DE KG VM ERYE R +W EV+ Sbjct: 22 GHAGAILQARRTVSKENGKLFCGVHTDEDIQHNKGTPVMNSSERYEHTRSNRWCSEVVEA 81 Query: 202 APWVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDII 381 AP+V +++K+ +V H DA+G D Y+ VK++G+FK KRT G+ST++II Sbjct: 82 APYVTDPNWMDKYQCQYVVHGDDITIDANG--EDCYKLVKEMGRFKVVKRTYGVSTTEII 139 Query: 382 MRIV 393 RI+ Sbjct: 140 HRIL 143 Score = 33.9 bits (76), Expect = 0.23 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 5/142 (3%) Frame = +1 Query: 31 HARSLEQAKKS----FPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIP 198 H ++Q +K P+ L+VG + + T+MT ER S+ CK+VD VI Sbjct: 210 HMGDIDQLRKLKMDLHPDKKLIVGITTSDYSS-----TIMTMKERVLSVLSCKYVDAVII 264 Query: 199 DAPWVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDI 378 DA ++++N + YH + + GKF E T ++ Sbjct: 265 DA----DATSMSQYNCE-------KYHIGTAV-------LTAAGKFSE------YLTKEL 300 Query: 379 IMRIVKDYNE-YVMRNLARGYS 441 I++ V+ E Y+ RN +G S Sbjct: 301 IVKRVESQREVYIARNQKKGMS 322
>TAGD_BACSU (P27623) Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)| (GCT) (Gro-PCT) (CDP-glycerol pyrophosphorylase) (Teichoic acid biosynthesis protein D) Length = 129 Score = 49.3 bits (116), Expect = 5e-06 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 1/121 (0%) Frame = +1 Query: 19 LPFGHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIP 198 L +GH + LE+AK+ YL+V DE + + + + + R L ++VDEVIP Sbjct: 13 LHWGHIKLLERAKQL--GDYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIP 70 Query: 199 DAPWVVTEEFLNKHNID-FVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSD 375 + W ++ + HNID FV D D G ++F+K + RT+GIST+ Sbjct: 71 EKNWEQKKQDIIDHNIDVFVMGD-----DWEGK----FDFLKDQCEVVYLPRTEGISTTK 121 Query: 376 I 378 I Sbjct: 122 I 122
>TARD_BACSU (Q8RKI6) Glycerol-3-phosphate cytidylyltransferase (EC 2.7.7.39)| (GCT) (Gro-PCT) (CDP-glycerol pyrophosphorylase) Length = 129 Score = 48.5 bits (114), Expect = 9e-06 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 1/119 (0%) Frame = +1 Query: 25 FGHARSLEQAKKSFPNAYLLVGCCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDA 204 +GH + LE+AK YL+VG DE + + ++ + + R L V+EVIP+ Sbjct: 15 YGHMKLLERAKNL--GDYLIVGLSTDEFNLQKQKKSHHSYEHRKFILETIDLVNEVIPEK 72 Query: 205 PWVVTEEFLNKHNID-FVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDI 378 W + KH+ID FV D D G ++F+K+ + RTDGIST+ I Sbjct: 73 NWEQKISDIQKHDIDTFVIGD-----DWKGK----FDFLKEYCEVIYLPRTDGISTTQI 122
>SYQ_BUCBP (Q89AD4) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 550 Score = 33.5 bits (75), Expect = 0.30 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 5/109 (4%) Frame = +1 Query: 67 PNAYLLVG-----CCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDAPWVVTEEFL 231 PN YL +G C N +L +FKG + D+ +++ +I D W Sbjct: 36 PNGYLHLGHAKSICLNFDLAQEFKGTCNLRFDDTNPKNEDTCYINSIIQDIKW------- 88 Query: 232 NKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDI 378 +++ H+ + Y AS N +Y++ KL K K D +S +I Sbjct: 89 ----LEYKWHNKIRY--ASLYFNKIYQYAIKLIK-KGLAYVDQLSPEEI 130
>FHR4_HUMAN (Q92496) Complement factor H-related protein 4 precursor (FHR-4)| Length = 331 Score = 33.1 bits (74), Expect = 0.40 Identities = 18/63 (28%), Positives = 31/63 (49%) Frame = +1 Query: 142 EDERYESLRHCKWVDEVIPDAPWVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVK 321 + Y + + +W + P ++TEE +NK+NI + Y+ +G D EF+ Sbjct: 247 QGSNYVTCSNGEWSEPPRCIHPCIITEENMNKNNIQLKGKSDIKYYAKTG---DTIEFMC 303 Query: 322 KLG 330 KLG Sbjct: 304 KLG 306
>UTX_HUMAN (O15550) Ubiquitously transcribed X chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein on the X chromosome) Length = 1401 Score = 33.1 bits (74), Expect = 0.40 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +1 Query: 172 CKWVDEVIPDAPWVVTEEFLNKHNIDFVAHDSLP-YHDASGASNDVYEFVKKLG 330 C+W V+P+ W V +F K+N++F+ P D A+ VY F+++ G Sbjct: 1164 CEWF--VVPEGYWGVLNDFCEKNNLNFLMGSWWPNLEDLYEANVPVYRFIQRPG 1215
>UTX_MOUSE (O70546) Ubiquitously transcribed X chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein on the X chromosome) (Fragment) Length = 1333 Score = 33.1 bits (74), Expect = 0.40 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +1 Query: 172 CKWVDEVIPDAPWVVTEEFLNKHNIDFVAHDSLP-YHDASGASNDVYEFVKKLG 330 C+W V+P+ W V +F K+N++F+ P D A+ VY F+++ G Sbjct: 1096 CEWF--VVPEGYWGVLNDFCEKNNLNFLMGSWWPNLEDLYEANVPVYRFIQRPG 1147
>UTY_HUMAN (O14607) Ubiquitously transcribed Y chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein on the Y chromosome) Length = 1347 Score = 32.7 bits (73), Expect = 0.52 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +1 Query: 172 CKWVDEVIPDAPWVVTEEFLNKHNIDFVAHDSLP-YHDASGASNDVYEFVKKLG 330 C+W V+P+ W V +F K+N++F+ P D A+ VY F+++ G Sbjct: 1111 CEWF--VVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPG 1162
>UTY_MOUSE (P79457) Ubiquitously transcribed Y chromosome tetratricopeptide| repeat protein (Ubiquitously transcribed TPR protein ON the Y chromosome) (Male-specific histocompatibility antigen H-YDB) Length = 1212 Score = 32.7 bits (73), Expect = 0.52 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Frame = +1 Query: 172 CKWVDEVIPDAPWVVTEEFLNKHNIDFVAHDSLP-YHDASGASNDVYEFVKKLG 330 C+W V+P+ W V +F K+N++F+ P D A+ VY F+++ G Sbjct: 976 CEWF--VVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPG 1027
>FHR3_HUMAN (Q02985) Complement factor H-related protein 3 precursor (FHR-3) (H| factor-like protein 3) (DOWN16) Length = 330 Score = 31.6 bits (70), Expect = 1.2 Identities = 18/63 (28%), Positives = 30/63 (47%) Frame = +1 Query: 142 EDERYESLRHCKWVDEVIPDAPWVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVK 321 + Y + + +W + P ++TEE +NK+NI Y+ +G D EF+ Sbjct: 246 QGSNYVTCSNGEWSEPPRCIHPCIITEENMNKNNIKLKGRSDRKYYAKTG---DTIEFMC 302 Query: 322 KLG 330 KLG Sbjct: 303 KLG 305
>SYQ_BUCAI (P57490) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 571 Score = 31.2 bits (69), Expect = 1.5 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%) Frame = +1 Query: 67 PNAYLLVG-----CCNDELTHKFKGRTVMTEDERYESLRHCKWVDEVIPDAPWV 213 PN YL +G C N EL +KGR + D+ + K+++ + D W+ Sbjct: 37 PNGYLHIGHAKSICLNFELASLYKGRCNLRFDDTNPLKENIKYIESIKHDINWL 90
>ATRX_PONPY (Q7YQM3) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 29.6 bits (65), Expect = 4.4 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Frame = +1 Query: 205 PWVVTEEFLNKHNIDFVAHDSLPYHDASGA-------SNDVYEFVKKLGKFKETKRTDGI 363 PW + ++++K N + DS+ AS + S+D Y KK GK + + Sbjct: 1886 PWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDDYTKKKKKGKKGKKDSSSSG 1945 Query: 364 STSDIIMRIVKDYN 405 S SD + ++K +N Sbjct: 1946 SGSDNDVEVIKVWN 1959
>ATRX_PANTR (Q7YQM4) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) Length = 2492 Score = 29.6 bits (65), Expect = 4.4 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Frame = +1 Query: 205 PWVVTEEFLNKHNIDFVAHDSLPYHDASGA-------SNDVYEFVKKLGKFKETKRTDGI 363 PW + ++++K N + DS+ AS + S+D Y KK GK + + Sbjct: 1886 PWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDDYTKKKKKGKKGKKDSSSSG 1945 Query: 364 STSDIIMRIVKDYN 405 S SD + ++K +N Sbjct: 1946 SGSDNDVEVIKVWN 1959
>ATRX_HUMAN (P46100) Transcriptional regulator ATRX (EC 3.6.1.-) (ATP-dependent| helicase ATRX) (X-linked helicase II) (X-linked nuclear protein) (XNP) (Znf-HX) Length = 2492 Score = 29.6 bits (65), Expect = 4.4 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 7/74 (9%) Frame = +1 Query: 205 PWVVTEEFLNKHNIDFVAHDSLPYHDASGA-------SNDVYEFVKKLGKFKETKRTDGI 363 PW + ++++K N + DS+ AS + S+D Y KK GK + + Sbjct: 1886 PWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSDDYTKKKKKGKKGKKDSSSSG 1945 Query: 364 STSDIIMRIVKDYN 405 S SD + ++K +N Sbjct: 1946 SGSDNDVEVIKVWN 1959
>RFX2_HUMAN (P48378) DNA-binding protein RFX2| Length = 723 Score = 29.3 bits (64), Expect = 5.7 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%) Frame = -3 Query: 269 RESCATKSMLC--LFKNSSVTTHGASGMTSSTHLQWRSDSYLSSSVMTVLPLNLCVNSSL 96 R S AT M L K+ +T+H SG+ +S HLQW D+Y ++ ++ LP + N L Sbjct: 169 RSSPATLEMAIENLQKSEGITSH-KSGLLNS-HLQWLLDNYETAEGVS-LPRSSLYNHYL 225 Query: 95 QH 90 +H Sbjct: 226 RH 227
>GATD_SULAC (Q4J955) Glutamyl-tRNA(Gln) amidotransferase subunit D (EC 6.3.5.-)| (Glu-ADT subunit D) Length = 446 Score = 28.9 bits (63), Expect = 7.5 Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Frame = +1 Query: 193 IPDAPWVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTS 372 +P+ W EFL+KHN+D D+ E K +GI Sbjct: 1 MPETYWGKAREFLSKHNLDV---------------GDIIELEK-----------NGIQVK 34 Query: 373 DIIMRIVKDYNEYVMRNLARGYS-----RNDLGVSYVKEKR 480 IIM + ++ ++ L GY+ N V +++KR Sbjct: 35 GIIMPTYSNNDDIIVLKLDNGYNIGISVSNIQNVKLIEKKR 75
>CP135_MOUSE (Q6P5D4) Centrosomal protein of 135 kDa (Cep135 protein)| (Centrosomal protein 4) Length = 1140 Score = 28.5 bits (62), Expect = 9.7 Identities = 22/94 (23%), Positives = 48/94 (51%) Frame = +1 Query: 202 APWVVTEEFLNKHNIDFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDII 381 +P V++ E NK N +AH ++ A+ ++ + +++L + KET T+ ++ S+ Sbjct: 253 SPDVLSLETRNKTNEKLIAHLNVQVDFLQQANKELEKHIQELMETKETVTTEVVNLSNRN 312 Query: 382 MRIVKDYNEYVMRNLARGYSRNDLGVSYVKEKRL 483 ++ ++ E + LA+ R+ V +K L Sbjct: 313 EKLCQELTE--IDQLAQRLERHKEQVLETADKEL 344
>RFX3_MOUSE (P48381) Transcription factor RFX3| Length = 749 Score = 28.5 bits (62), Expect = 9.7 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Frame = -3 Query: 269 RESCATKSMLC--LFKNSSVTTHGASGMTSSTHLQWRSDSYLSSSVMTVLPLNLCVNSSL 96 R S AT M L K+ ++TH +S + S HLQW D+Y ++ ++ LP + N L Sbjct: 153 RASPATIEMAIETLQKSDGLSTHRSSLLNS--HLQWLLDNYETAEGVS-LPRSTLYNHYL 209 Query: 95 QH 90 +H Sbjct: 210 RH 211
>RFX3_HUMAN (P48380) Transcription factor RFX3| Length = 749 Score = 28.5 bits (62), Expect = 9.7 Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Frame = -3 Query: 269 RESCATKSMLC--LFKNSSVTTHGASGMTSSTHLQWRSDSYLSSSVMTVLPLNLCVNSSL 96 R S AT M L K+ ++TH +S + S HLQW D+Y ++ ++ LP + N L Sbjct: 153 RASPATIEMAIETLQKSDGLSTHRSSLLNS--HLQWLLDNYETAEGVS-LPRSTLYNHYL 209 Query: 95 QH 90 +H Sbjct: 210 RH 211
>TRPA_SULAC (Q4J8X8) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 245 Score = 28.5 bits (62), Expect = 9.7 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%) Frame = +1 Query: 310 EFVKKLGKFK---ETKRTDGISTSDIIMRIVKDYNEYV 414 E+V KLG F + R DG+ D+++ V +Y +YV Sbjct: 88 EYVDKLGDFLLKLKESRVDGVLFPDLLIDYVDEYEKYV 125
>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)| Length = 399 Score = 28.5 bits (62), Expect = 9.7 Identities = 19/63 (30%), Positives = 30/63 (47%) Frame = +1 Query: 247 DFVAHDSLPYHDASGASNDVYEFVKKLGKFKETKRTDGISTSDIIMRIVKDYNEYVMRNL 426 D +A D L Y AS++VY ++ K K+ T D I + VK+Y + ++ Sbjct: 125 DTLARDGLRY---DSASDNVYMNAEQEEKAKKANNPQHSITKDEIKQYVKEYVQAAKNSI 181 Query: 427 ARG 435 A G Sbjct: 182 AAG 184 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,471,608 Number of Sequences: 219361 Number of extensions: 1136713 Number of successful extensions: 3442 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3351 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3424 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3304846491 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
